Miyakogusa Predicted Gene

Lj6g3v1211980.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1211980.1 Non Characterized Hit- tr|I1L1L3|I1L1L3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19153
PE,83.91,0,FAD/NAD(P)-binding domain,NULL; seg,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; carotene-,CUFF.59261.1
         (510 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g040060.1 | lycopene epsilon cyclase | HC | chr2:17570312-...   746   0.0  
Medtr7g090150.1 | chromoplast lycopene beta-cyclase | HC | chr7:...   275   9e-74
Medtr2g086700.1 | capsanthin/capsorubin synthase, chromoplast pr...   266   3e-71
Medtr2g086730.1 | capsanthin/capsorubin synthase, chromoplast pr...   254   1e-67

>Medtr2g040060.1 | lycopene epsilon cyclase | HC |
           chr2:17570312-17577439 | 20130731
          Length = 531

 Score =  746 bits (1925), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/510 (76%), Positives = 421/510 (82%), Gaps = 6/510 (1%)

Query: 1   MECVGARNLAAMAFCVSPSXXXXXXXXXXXXXXVSSSGHAVRWRSHCLKVXXXXXXXXXX 60
           MECVGARNL AMAFC+SPS              VSS  + +R RS  +KV          
Sbjct: 1   MECVGARNLTAMAFCISPSLRLRRKKICWRRREVSS--NVIRLRS--MKVNAKAGGAGSE 56

Query: 61  XXXCVVTKEEFADEEDYVKAGGSELVFVXXXXXXXXXXXXXLADKLQPXXXXXXXXXXXX 120
              CVV KE++ADEED+VKAGGSELVFV             LADKL P            
Sbjct: 57  S--CVVAKEDYADEEDFVKAGGSELVFVQMQQKKSMDLQSKLADKLPPICVGDGILDLVV 114

Query: 121 XXXXPAGLALAAECGMLGLKVGLIGPDLPFTNNYGVWEDEFKGLGLEGCIEHVWKDTIVY 180
               PAGLALAAE G LGLKVGLIGPDLPFTNNYGVWEDEFKGLGLEGCIEHVWKDT+VY
Sbjct: 115 IGCGPAGLALAAESGKLGLKVGLIGPDLPFTNNYGVWEDEFKGLGLEGCIEHVWKDTVVY 174

Query: 181 LDNKDPILIGRSYGRVSRHLLHEELLKRCVESGVSYLSSRVERIVEASNGNSHVVCEYDI 240
           +DNK+PI IGRSYGRVSRHLLHEELL+RCVESGVSYL S+VERIVEASNG++HVVCEYD 
Sbjct: 175 IDNKNPISIGRSYGRVSRHLLHEELLRRCVESGVSYLGSKVERIVEASNGHNHVVCEYDT 234

Query: 241 KVPCRLATVASGAASGKLLQYEVGGPKVSVQTAYGIEVEVENNPYDPNLMVFMDYRDYMK 300
            VPCRLATVASGAASGKLLQYEVGGPKV VQTAYG+EVEVEN+PYDPN+MVFMDYRDYMK
Sbjct: 235 VVPCRLATVASGAASGKLLQYEVGGPKVCVQTAYGVEVEVENSPYDPNVMVFMDYRDYMK 294

Query: 301 QNVQCLEASYPTFLYAMPMSSTKVFFEETCLASEDAMPFDLLKKKLFSRLNTMGIRITKT 360
            NVQ LEA YPTFLYAMPMS +KVFFEETCLAS+DAMPFDLLKKKL SRL TMGI++TKT
Sbjct: 295 NNVQSLEAKYPTFLYAMPMSRSKVFFEETCLASKDAMPFDLLKKKLLSRLKTMGIKVTKT 354

Query: 361 YEEEWSYIPVGGSLPNTDQKNLAFGAAACMVHPATGYSVVRSLSEAPKYASIIATILKES 420
           YEEEWSYIPVGGSLPNT+QKNLAFGAAA MVHPATGYSVVRSLSEAP+YAS+IATIL + 
Sbjct: 355 YEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPQYASVIATILNDG 414

Query: 421 HARGIVTHNRTKENLSMQAWNGLWPQEKKRQRAFFLFGLALILQLDIEGIRTFFRTFFCL 480
            AR IVT+ R+KEN SM+AWN LWPQE+KRQR+FFLFGLALI+QLDIEG RTFFRTFFCL
Sbjct: 415 TARDIVTYGRSKENPSMRAWNTLWPQERKRQRSFFLFGLALIVQLDIEGTRTFFRTFFCL 474

Query: 481 PTWMWQGFLGSSLSSRDLALFALYMFIIAP 510
           P WMWQGFLGSSLSS+DL LFALYMFIIAP
Sbjct: 475 PEWMWQGFLGSSLSSKDLLLFALYMFIIAP 504


>Medtr7g090150.1 | chromoplast lycopene beta-cyclase | HC |
           chr7:35385688-35387184 | 20130731
          Length = 498

 Score =  275 bits (702), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 151/390 (38%), Positives = 227/390 (58%), Gaps = 15/390 (3%)

Query: 125 PAGLALAAECGMLGLKVGLIGPD--LPFTNNYGVWEDEFKGLGLEGCIEHVWKDTIVYLD 182
           PAGLA+A +    GL V  I P+  L + NNYGVW DEF+ + L  C++  W   +VY+D
Sbjct: 91  PAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDKTWSGAVVYID 150

Query: 183 NKDPILIGRSYGRVSRHLLHEELLKRCVESGVSYLSSRVERIVEASNGNSHVVCEYDIKV 242
           +K    + R YGRV+R LL  ++L++C+ +GV +  ++V +++   +  S ++C   + V
Sbjct: 151 DKTKKDLDRPYGRVNRKLLKSKMLQKCIANGVKFHQAKVIKVIHEES-KSMLICNDGVTV 209

Query: 243 PCRLATVASGAASGKLLQYEVGGPKVSVQTAYGIEVEVENNPYDPNLMVFMDYRD-YMKQ 301
              +   A+G  S  L+QY+        Q AYGI  EVE +P+D + M+FMD+RD ++  
Sbjct: 210 QATVVLDATGF-SRCLVQYD-KPYNPGYQVAYGILAEVEEHPFDVDKMLFMDWRDSHLDN 267

Query: 302 NVQCLE--ASYPTFLYAMPMSSTKVFFEETCLASEDAMPFDLLKKKLFSRLNTMGIRITK 359
           +++  E  +  PTFLYAMP SSTK+F EET L +   +  D ++ ++ +RL  +GI +  
Sbjct: 268 DLKLKERNSKIPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQDRMVARLKHLGINVKS 327

Query: 360 TYEEEWSYIPVGGSLPNTDQKNLAFGAAACMVHPATGYSVVRSLSEAPKYASIIATILKE 419
             E+E   IP+GG LP   Q+ +  G  A MVHP+TGY V R+L+ AP  A+ I   L  
Sbjct: 328 IEEDEQCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVQYLGS 387

Query: 420 SHARGIVTHNRTKENLSMQAWNGLWPQEKKRQRAFFLFGLALILQLDIEGIRTFFRTFFC 479
              RG++      + +S + W  LWP E++RQR FF FG+ ++L+LD+ G R FF  FF 
Sbjct: 388 D--RGLLG-----DEVSARVWKDLWPIERRRQREFFCFGMDVLLKLDLPGTRRFFDAFFN 440

Query: 480 LPTWMWQGFLGSSLSSRDLALFALYMFIIA 509
           L    W GFL S L   +L  F L +F  A
Sbjct: 441 LEPHYWHGFLSSRLYLPELFTFGLSLFSYA 470


>Medtr2g086700.1 | capsanthin/capsorubin synthase, chromoplast
           protein | HC | chr2:36455122-36457181 | 20130731
          Length = 502

 Score =  266 bits (681), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 150/391 (38%), Positives = 221/391 (56%), Gaps = 19/391 (4%)

Query: 125 PAGLALAAECGMLGLKVGLIGPDLPFT---NNYGVWEDEFKGLGLEGCIEHVWKDTIVYL 181
           PAG+ LA +  + G+KV  + P+ P +   NNYGVW DEF+GLGLE C++  W    +Y+
Sbjct: 90  PAGIRLAEQVSLYGIKVCCVDPN-PLSMWPNNYGVWLDEFEGLGLEDCLDKTWPMASIYI 148

Query: 182 DNKDPILIGRSYGRVSRHLLHEELLKRCVESGVSYLSSRVERIVEASNGNSHVVCEYDIK 241
           D+     + R YGRVSR  L E+L+K CV +GV +  ++V  I +     S VVC+   K
Sbjct: 149 DDNKTKYLDRCYGRVSRKKLKEKLVKGCVFNGVRFYKAKVWEI-KHHEFESIVVCDDGTK 207

Query: 242 VPCRLATVASGAASG--KLLQYEVGGPKVSVQTAYGIEVEVENNPYDPNLMVFMDYRDYM 299
           +   L   ASG  S       +++       Q A+G+ VEV+ +P+D + MV MD+RD  
Sbjct: 208 LKGSLVVDASGFGSNFTDYDNHKLRKKNYGCQIAHGVLVEVDGHPFDLDKMVLMDWRDSH 267

Query: 300 KQNVQCLE---ASYPTFLYAMPMSSTKVFFEETCLASEDAMPFDLLKKKLFSRLNTMGIR 356
             N   L    + +PTFLYAMP SS  +F EET L S   + +  +K+++ +RL  +GI 
Sbjct: 268 LGNEPYLRDGNSKFPTFLYAMPFSSNLIFLEETSLVSRPVLSYMDVKRRMVARLRHLGIN 327

Query: 357 ITKTYEEEWSYIPVGGSLPNTDQKNLAFGAAACMVHPATGYSVVRSLSEAPKYASIIATI 416
           + +  E+E   IP+GG LP   Q  + FG  + +VHP+TGY V R+++ AP  A+ I   
Sbjct: 328 VKRVLEDEKCLIPMGGPLPRISQNVMPFGGNSGIVHPSTGYMVARTMALAPIVAASINEC 387

Query: 417 LKESHA-RGIVTHNRTKENLSMQAWNGLWPQEKKRQRAFFLFGLALILQLDIEGIRTFFR 475
           L  +   RG        +NL    WN +WP E++  R  + FG+  +L+LD+   R+FF 
Sbjct: 388 LGSTRMIRG--------KNLYANVWNSMWPIERRFVRECYCFGMETLLKLDLNETRSFFD 439

Query: 476 TFFCLPTWMWQGFLGSSLSSRDLALFALYMF 506
            FF L  + WQGFL S LS +D AL +L +F
Sbjct: 440 AFFDLKPYYWQGFLSSKLSLKDFALLSLSLF 470


>Medtr2g086730.1 | capsanthin/capsorubin synthase, chromoplast
           protein | HC | chr2:36463401-36461725 | 20130731
          Length = 490

 Score =  254 bits (649), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 144/387 (37%), Positives = 219/387 (56%), Gaps = 19/387 (4%)

Query: 125 PAGLALAAECGMLGLKVGLIGPDLPFT---NNYGVWEDEFKGLGLEGCIEHVWKDTIVYL 181
           PAG+ LA +  + G+KV  + P+ P +   NNYGVW DEF+GLGLE C++  W  T +Y+
Sbjct: 86  PAGIRLAEQVSLYGMKVCCVDPN-PLSIWPNNYGVWFDEFEGLGLEDCLDKTWPITSIYI 144

Query: 182 DNKDPILIGRSYGRVSRHLLHEELLKRCVESGVSYLSSRVERIVEASNGNSHVVCEYDIK 241
           D++    + R YGRV++  L E L+K CV +GV +  ++  +I E     S VVC+  + 
Sbjct: 145 DDRTTKYLDRCYGRVNKRKLKENLVKGCVFNGVRFYKAKAMQI-EHHEFESIVVCDDGVD 203

Query: 242 VPCRLATVASGAASGKLLQYEVGGPK-VSVQTAYGIEVEVENNPYDPNLMVFMDYRDYMK 300
           +   L   ASG  S K ++Y+    K    Q AYG+  EV+ +P+D + +V MD+RD   
Sbjct: 204 LKGSLVVDASGFGS-KFIEYDDHKVKNYGFQIAYGVLAEVDAHPFDLDKVVLMDWRD--- 259

Query: 301 QNVQCLEASYPTFLYAMPMSSTKVFFEETCLASEDAMPFDLLKKKLFSRLNTMGIRITKT 360
            + +   A   TF+YAMP SS  +F EET L S  A+    +K ++ +RL  +GI + + 
Sbjct: 260 SHCRDGNAKSSTFMYAMPFSSNLIFLEETSLVSRPALSHTEVKTRMVARLKHLGINVKRV 319

Query: 361 YEEEWSYIPVGGSLPNTDQKNLAFGAAACMVHPATGYSVVRSLSEAPKYASIIATILKES 420
            E+E   IP+GG LP   Q  +AFGA + +VHP+TGY + R+++ AP  A+ I   L  +
Sbjct: 320 LEDEKGLIPMGGPLPRIPQNVIAFGANSGVVHPSTGYMMARTMTLAPIVAASINQCLGST 379

Query: 421 HA-RGIVTHNRTKENLSMQAWNGLWPQEKKRQRAFFLFGLALILQLDIEGIRTFFRTFFC 479
              RG        + +    WN +WP E +  R F+ FG+  +L+LD+   R FF  FF 
Sbjct: 380 RMIRG--------KQVYANVWNSMWPIESRISREFYTFGMETLLKLDLNETRQFFDAFFE 431

Query: 480 LPTWMWQGFLGSSLSSRDLALFALYMF 506
           L  +  QGFL SSL+  D+   ++ +F
Sbjct: 432 LKPYYMQGFLSSSLTLNDIVWLSMSLF 458