Miyakogusa Predicted Gene

Lj6g3v1211610.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1211610.1 tr|G7I4A7|G7I4A7_MEDTR Integral membrane protein
OS=Medicago truncatula GN=MTR_1g008180 PE=4 SV=1,69.49,2e-17,
,CUFF.59244.1
         (165 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g040600.1 | integral membrane protein | HC | chr2:17808876...   276   5e-75
Medtr4g125680.1 | plant/MOK9-4 protein | HC | chr4:52141130-5214...   243   7e-65
Medtr2g039830.1 | transmembrane protein, putative | LC | chr2:17...   182   1e-46
Medtr2g039840.1 | transmembrane protein, putative | LC | chr2:17...   122   1e-28
Medtr1g008180.1 | transmembrane protein, putative | HC | chr1:77...    94   8e-20

>Medtr2g040600.1 | integral membrane protein | HC |
           chr2:17808876-17804595 | 20130731
          Length = 348

 Score =  276 bits (707), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 133/163 (81%), Positives = 146/163 (89%)

Query: 1   MRPEGTAERAMWPYVEDKSYLWTWLFLVPLVVYTLWQVLYFLIVNVLRRQRFLRDPEVMT 60
           MRPEG A R  WPY+EDKSYL TWLFLVPLVVYTLWQVLY+LIVNVLRRQRFLRDPEVMT
Sbjct: 185 MRPEGAAARVTWPYIEDKSYLCTWLFLVPLVVYTLWQVLYYLIVNVLRRQRFLRDPEVMT 244

Query: 61  SYRELSKKAQKANNIWWRSSGLLGDQNRFLMYIVFQGMFTVATTALTVPIFLSYELSVVF 120
           SYRELSKKAQKANN+WWR SGLLGDQNR LM+I+ QGMFTVAT ALTVPIFLSY+LSVVF
Sbjct: 245 SYRELSKKAQKANNMWWRLSGLLGDQNRLLMFILLQGMFTVATMALTVPIFLSYKLSVVF 304

Query: 121 QILKISASAWNGGSFVLDVMPKQVILKEKKKSEVIQHAQIQKQ 163
           QILK+SAS WNG SF+L+VMP+QVILKEKKKSE++    +  Q
Sbjct: 305 QILKVSASVWNGASFLLEVMPRQVILKEKKKSEMLTVPILNDQ 347


>Medtr4g125680.1 | plant/MOK9-4 protein | HC |
           chr4:52141130-52143222 | 20130731
          Length = 338

 Score =  243 bits (619), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 113/138 (81%), Positives = 122/138 (88%)

Query: 1   MRPEGTAERAMWPYVEDKSYLWTWLFLVPLVVYTLWQVLYFLIVNVLRRQRFLRDPEVMT 60
           M PEG+ +R  WPYVEDKSYLWTWLFLVPLV Y LWQVLYFLIVNVLRRQR LRDPEVMT
Sbjct: 187 MHPEGSLQRVTWPYVEDKSYLWTWLFLVPLVAYILWQVLYFLIVNVLRRQRLLRDPEVMT 246

Query: 61  SYRELSKKAQKANNIWWRSSGLLGDQNRFLMYIVFQGMFTVATTALTVPIFLSYELSVVF 120
           SYRELSKKA+KANNIWWR SGL GDQNR LMYI  QG+FT+AT AL VPIFLSYEL V+F
Sbjct: 247 SYRELSKKAKKANNIWWRLSGLFGDQNRMLMYIFLQGIFTIATMALAVPIFLSYELHVIF 306

Query: 121 QILKISASAWNGGSFVLD 138
           QILK+SAS WNGGSF+L+
Sbjct: 307 QILKVSASVWNGGSFLLE 324


>Medtr2g039830.1 | transmembrane protein, putative | LC |
           chr2:17456465-17455385 | 20130731
          Length = 251

 Score =  182 bits (462), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 93/164 (56%), Positives = 112/164 (68%), Gaps = 28/164 (17%)

Query: 12  WPY---VEDKSYLWTWLFLVPLVVYTLWQVLYFLIVNVLRRQRFLRDPEVMTS------- 61
           +PY   + DKSY+WTW+FLVPL  Y LWQ+LY LIVNVL RQR LRDPE+MTS       
Sbjct: 86  YPYKQLLADKSYIWTWMFLVPLAAYILWQLLYLLIVNVLCRQRLLRDPEIMTSTVHNRRE 145

Query: 62  ------------------YRELSKKAQKANNIWWRSSGLLGDQNRFLMYIVFQGMFTVAT 103
                              RELS+KA+KANN+WW  SGLLGDQNR LMYIV QG+FT+ T
Sbjct: 146 RERERERERERERERESRDRELSRKAKKANNVWWHLSGLLGDQNRLLMYIVLQGIFTIVT 205

Query: 104 TALTVPIFLSYELSVVFQILKISASAWNGGSFVLDVMPKQVILK 147
            ALTVPIFLS+EL  +F+I+K+S S WNGGSF+LD    +  +K
Sbjct: 206 MALTVPIFLSFELHALFKIIKLSVSVWNGGSFLLDTAKNKSEMK 249


>Medtr2g039840.1 | transmembrane protein, putative | LC |
           chr2:17459963-17461678 | 20130731
          Length = 155

 Score =  122 bits (306), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 59/91 (64%), Positives = 71/91 (78%), Gaps = 7/91 (7%)

Query: 64  ELSKKAQKANNIWWRSSGLLGDQNRFLMYIVFQGMFTVATTALTVPIFLSYELSVVFQIL 123
           ELSKKA+KANN+WWR SGLLGDQNR LMYIV Q +FT+AT ALTVPIF SY+L   FQI+
Sbjct: 57  ELSKKAKKANNVWWRLSGLLGDQNRLLMYIVLQSIFTIATMALTVPIFFSYKLHAFFQII 116

Query: 124 KISASAWNGGSFVLDVMPKQVILKEKKKSEV 154
           K++ S WN GSF+L+V       KEK +SE+
Sbjct: 117 KLAVSVWNEGSFLLEV-------KEKNRSEL 140


>Medtr1g008180.1 | transmembrane protein, putative | HC |
          chr1:775479-774819 | 20130731
          Length = 69

 Score = 93.6 bits (231), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 41/59 (69%), Positives = 49/59 (83%)

Query: 25 LFLVPLVVYTLWQVLYFLIVNVLRRQRFLRDPEVMTSYRELSKKAQKANNIWWRSSGLL 83
          +FLVPL  Y +WQ+LY LIVNVL R+R LRDPEVMTSYRELS+KA+KANN+WW    +L
Sbjct: 1  MFLVPLAAYIMWQLLYLLIVNVLCRKRLLRDPEVMTSYRELSRKAKKANNVWWHCKCIL 59