Miyakogusa Predicted Gene

Lj6g3v1201390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1201390.1 tr|C6ZKI9|C6ZKI9_MENPI ELF4-like protein
(Fragment) OS=Mentha piperita PE=2 SV=1,80.28,1e-18,DUF1313,Protein of
unknown function DUF1313,CUFF.59236.1
         (116 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g041310.1 | early flowering protein | HC | chr2:18122682-1...   198   8e-52
Medtr4g125590.1 | early flowering protein | HC | chr4:52099665-5...   191   9e-50
Medtr8g020200.2 | early flowering protein | HC | chr8:7113610-71...   157   2e-39
Medtr8g020200.1 | early flowering protein | HC | chr8:7113056-71...   157   2e-39
Medtr3g070490.1 | early flowering protein | HC | chr3:31630253-3...    85   2e-17

>Medtr2g041310.1 | early flowering protein | HC |
           chr2:18122682-18125003 | 20130731
          Length = 114

 Score =  198 bits (504), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 99/116 (85%), Positives = 108/116 (93%), Gaps = 2/116 (1%)

Query: 1   MENDTFSGVGHGILQQIDGKVLHTFQKSFVQVQNILDQNRVLINEINQNHESKVPDNLNR 60
           ME+DTFSG+G+G   QID K+L TFQKSFVQVQNILDQNR+LINEINQNHESK+PDNL+R
Sbjct: 1   MEDDTFSGIGNGT--QIDTKILGTFQKSFVQVQNILDQNRLLINEINQNHESKIPDNLSR 58

Query: 61  NVGLIKELNNNIRRVVDLYADLSSSFTKSIDVNSEGDSSGAVKSDGKACHKRNRPT 116
           NVGLIKELNNNIRRVVDLYADLSSSFTKS+DV SEGDSSGAVKSDGK  HKR+RPT
Sbjct: 59  NVGLIKELNNNIRRVVDLYADLSSSFTKSMDVTSEGDSSGAVKSDGKGGHKRHRPT 114


>Medtr4g125590.1 | early flowering protein | HC |
           chr4:52099665-52102501 | 20130731
          Length = 115

 Score =  191 bits (486), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 95/115 (82%), Positives = 107/115 (93%), Gaps = 1/115 (0%)

Query: 1   MENDTFSGVGHGILQQIDGKVLHTFQKSFVQVQNILDQNRVLINEINQNHESKVPDNLNR 60
           ME DT+S +G+G  QQIDGK+L TFQK FVQVQNILDQNRVLINEINQNHES+VPDNLN+
Sbjct: 1   MEGDTYSTLGNGT-QQIDGKILQTFQKRFVQVQNILDQNRVLINEINQNHESRVPDNLNK 59

Query: 61  NVGLIKELNNNIRRVVDLYADLSSSFTKSIDVNSEGDSSGAVKSDGKACHKRNRP 115
           NVGLIKELN+NIRRVVDLYADLS+SFTKS DV+SEGDSSGAVKS+GK+ HKR+RP
Sbjct: 60  NVGLIKELNSNIRRVVDLYADLSTSFTKSNDVSSEGDSSGAVKSEGKSSHKRHRP 114


>Medtr8g020200.2 | early flowering protein | HC |
           chr8:7113610-7111651 | 20130731
          Length = 114

 Score =  157 bits (398), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 79/116 (68%), Positives = 94/116 (81%), Gaps = 2/116 (1%)

Query: 1   MENDTFSGVGHGILQQIDGKVLHTFQKSFVQVQNILDQNRVLINEINQNHESKVPDNLNR 60
           ME D F  +G     Q+D +VLH FQKS VQ Q+IL+QNR+LIN+INQNHES++PDNL+R
Sbjct: 1   MEGDIFGELGD--TSQVDSRVLHVFQKSLVQAQDILNQNRLLINQINQNHESRIPDNLSR 58

Query: 61  NVGLIKELNNNIRRVVDLYADLSSSFTKSIDVNSEGDSSGAVKSDGKACHKRNRPT 116
           NV LIKELN+NIRRVVDLYADLSSSFTKS + +SEGDSSG +KSDGK   KR R +
Sbjct: 59  NVSLIKELNSNIRRVVDLYADLSSSFTKSREASSEGDSSGTLKSDGKVNQKRIRSS 114


>Medtr8g020200.1 | early flowering protein | HC |
           chr8:7113056-7111741 | 20130731
          Length = 114

 Score =  157 bits (398), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 79/116 (68%), Positives = 94/116 (81%), Gaps = 2/116 (1%)

Query: 1   MENDTFSGVGHGILQQIDGKVLHTFQKSFVQVQNILDQNRVLINEINQNHESKVPDNLNR 60
           ME D F  +G     Q+D +VLH FQKS VQ Q+IL+QNR+LIN+INQNHES++PDNL+R
Sbjct: 1   MEGDIFGELGD--TSQVDSRVLHVFQKSLVQAQDILNQNRLLINQINQNHESRIPDNLSR 58

Query: 61  NVGLIKELNNNIRRVVDLYADLSSSFTKSIDVNSEGDSSGAVKSDGKACHKRNRPT 116
           NV LIKELN+NIRRVVDLYADLSSSFTKS + +SEGDSSG +KSDGK   KR R +
Sbjct: 59  NVSLIKELNSNIRRVVDLYADLSSSFTKSREASSEGDSSGTLKSDGKVNQKRIRSS 114


>Medtr3g070490.1 | early flowering protein | HC |
           chr3:31630253-31631053 | 20130731
          Length = 130

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 54/70 (77%)

Query: 18  DGKVLHTFQKSFVQVQNILDQNRVLINEINQNHESKVPDNLNRNVGLIKELNNNIRRVVD 77
           D +   T  KSF QVQ++LD+NR +I ++N+N +S++PDN+ +NVGLI+ELN NI +V  
Sbjct: 46  DPEAWQTLNKSFRQVQSVLDRNRAIIQQVNENQQSRMPDNMVKNVGLIQELNGNISKVAS 105

Query: 78  LYADLSSSFT 87
           LY+DL+S FT
Sbjct: 106 LYSDLNSDFT 115