Miyakogusa Predicted Gene

Lj6g3v1201360.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1201360.1 Non Characterized Hit- tr|K4A1U8|K4A1U8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si032843,38.1,8e-17,seg,NULL; S_R_A_B_BARREL,Stress responsive
alpha-beta barrel; Stress responsive A/B Barrel Domain,St,CUFF.59239.1
         (215 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0121s0060.1 | stress responsive A/B barrel domain protein |...   252   2e-67
Medtr4g125530.1 | stress responsive A/B barrel domain protein | ...   189   1e-48
Medtr4g125560.1 | stress responsive A/B barrel domain protein | ...   138   5e-33

>Medtr0121s0060.1 | stress responsive A/B barrel domain protein | HC
           | scaffold0121:28502-27484 | 20130731
          Length = 265

 Score =  252 bits (644), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 125/218 (57%), Positives = 158/218 (72%), Gaps = 6/218 (2%)

Query: 3   SAASHAVEHIVLIRVKDDVEPSKVN----DIRSLATLDQVRHLTVGPVLRS--HATTTNA 56
           S+ S  VEHIVL +VK++ E SKVN    ++++L T++QVRHLT GP+L +  H T+T  
Sbjct: 46  SSTSQGVEHIVLFKVKENTESSKVNTMINELQNLVTIEQVRHLTFGPILNNNEHTTSTIP 105

Query: 57  TSDLRFTHLLHSRYDSKEDLEAYNAHPRHLGAVRGSLFPICGDLMAVDWFGDEDALPPHP 116
            SDLR+THLLHSRYDSKEDL+ YNAHP HL  VR    PI  DL+ +DW   E ALPPHP
Sbjct: 106 FSDLRYTHLLHSRYDSKEDLQIYNAHPTHLNGVRNFALPILDDLLVIDWIAGEVALPPHP 165

Query: 117 TPGSAIRVSFLKLKDGAGGEVKDEVLDAVRKMRXXXXXXXXXXXXXNFSPEWAKGLSIAS 176
           +PG+A RVSFLKLKD   GEVK+EV  A++ ++             N SPE AKG +IAS
Sbjct: 166 SPGTAFRVSFLKLKDEKNGEVKEEVFRAIQGIKESVGGVSYVSYGENISPERAKGFTIAS 225

Query: 177 LAVFPGRKELEEVDPNEWLVKVREHLESVVVVDYVLPL 214
           L VFPGR+EL+ VDP+E L+KV+EHLESV+VVD+V+PL
Sbjct: 226 LVVFPGREELDRVDPSEGLIKVKEHLESVLVVDHVVPL 263


>Medtr4g125530.1 | stress responsive A/B barrel domain protein | HC
           | chr4:52076843-52075750 | 20130731
          Length = 267

 Score =  189 bits (481), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 104/214 (48%), Positives = 137/214 (64%), Gaps = 25/214 (11%)

Query: 4   AASHAVEHIVLIRVKDDVEPSKV----NDIRSLATLDQVRHLTVGPVLRSHATTTNATSD 59
           + S  +EHIVL +VK D EPSK+    N++ SL +LDQV HLTVGP+LR+ +T+      
Sbjct: 47  SKSQTIEHIVLFKVKQDTEPSKITSMINNLSSLVSLDQVLHLTVGPLLRNRSTS------ 100

Query: 60  LRFTHLLHSRYDSKEDLEAYNAHPRHLGAVRGSLFPICGDLMAVDWFGD----EDALPPH 115
           L FTH+LH+RY SK+DLEAY+AHP H+  V+G++ PI  D+MAVDW  +    ED +P  
Sbjct: 101 LTFTHMLHTRYSSKQDLEAYSAHPSHVSVVKGNVLPIIDDIMAVDWIAEDLNGEDLVPKE 160

Query: 116 PTPGSAIRVSFLKLKDGAGGEVKDEVLDAVRKMRXXXXXXXXXXXXXNFSPEWAKGLSIA 175
              GSA+RV FLKLK+     V D+VL  ++++              NFSP  AKG SIA
Sbjct: 161 ---GSAMRVMFLKLKENV---VNDKVLQVIKEIPENFQQIKQISYGENFSPARAKGYSIA 214

Query: 176 SLAVFPGRKELEEVDPNEWLV-----KVREHLES 204
           SLAVFPG KE+EE D N  L+     KVR+ +ES
Sbjct: 215 SLAVFPGEKEMEEHDSNHELMKFQKDKVRDQIES 248


>Medtr4g125560.1 | stress responsive A/B barrel domain protein | LC
           | chr4:52087747-52087097 | 20130731
          Length = 216

 Score =  138 bits (347), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/216 (41%), Positives = 130/216 (60%), Gaps = 25/216 (11%)

Query: 9   VEHIVLIRVKDDVEPSKVN----DIRSLATLDQVRHLTVGPVLRSHATTTNATSDLRFTH 64
           +EH+VL R+K+DV  S ++     + SL +L++  HLT+GP++     ++N+ S   FTH
Sbjct: 6   IEHVVLFRIKEDVPQSAIDSMVKQVNSLISLEEPLHLTMGPLVS--IQSSNSISSFNFTH 63

Query: 65  LLHSRYDSKEDLEAYNAHPRHLGAVRGSLFPICGDLMAVDWFG---DEDALPPHPTPGSA 121
           ++HSR+ SKEDL AY  HP HL  ++ +  PI  + MA++W     D D +  H   GSA
Sbjct: 64  MIHSRFRSKEDLHAYAVHPTHLAVIKDNK-PIVDETMALNWVTEVHDNDLVLQH---GSA 119

Query: 122 IRVSFLKLKDGAGGEVKDEVLDAVRKMRXXXXXXXXXXXXXNFSPEWAKGLSIASLAVFP 181
           ++V F KLK+G G EVKDEVL  +  ++             NFSP  AKG SI SL+VFP
Sbjct: 120 MQVVFFKLKEGLGEEVKDEVLKGISGIQ------HQFNCGENFSPGRAKGFSIGSLSVFP 173

Query: 182 GRKELEEVDPNEWLV------KVREHLESVVVVDYV 211
             +EL EVD +E         KV+E+L++V+V+ YV
Sbjct: 174 SLRELHEVDSHEEFRKYDTNDKVKENLDTVLVLGYV 209