Miyakogusa Predicted Gene

Lj6g3v1187470.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1187470.2 Non Characterized Hit- tr|I1MHF8|I1MHF8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20654
PE,82.72,0,TTL,Tubulin-tyrosine ligase; RNI-like,NULL; seg,NULL;
SUBFAMILY NOT NAMED,NULL; TUBULIN TYROSINE LIG,CUFF.59219.2
         (866 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g041640.1 | tubulin-tyrosine ligase family protein | HC | ...  1494   0.0  

>Medtr2g041640.1 | tubulin-tyrosine ligase family protein | HC |
           chr2:18279191-18287228 | 20130731
          Length = 873

 Score = 1494 bits (3867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 719/875 (82%), Positives = 782/875 (89%), Gaps = 11/875 (1%)

Query: 1   MVAMAGGAK-RIRTYEEFAQVHALLLASSGLPQSLFRRLFQKLAGETFDGGNHFQIEPCE 59
           MVAMA   K RI TYE+F +VH +LLA+SGLP+SL RRLF KL+ ETFDGG HFQIEPCE
Sbjct: 1   MVAMATTTKKRIETYEDFTKVHGILLAASGLPESLHRRLFHKLSTETFDGGEHFQIEPCE 60

Query: 60  DGRMRRLVLTSDSMPKDSDVFLIDHAWTFRLPDAYNQLLEVPGLAERMGSLMCVDIDMNL 119
           + RMRRLVLTSDSM KDS+VFL+DHAWTFRL DAY QL EVPGLAERMGSLMCVDID  L
Sbjct: 61  ENRMRRLVLTSDSMAKDSNVFLVDHAWTFRLSDAYKQLREVPGLAERMGSLMCVDID--L 118

Query: 120 EGEGEVS--------EKPDVLEVLESEVRETKEKGDGKLRWLELEGXXXXXXXXXXXXXX 171
           +GE EV+        E+  V+E+LESEVRE KEKGDG LRWLEL+G              
Sbjct: 119 DGEIEVNGVDDEVSREEVSVVEMLESEVREVKEKGDGTLRWLELDGLDIDDDTFLSLDLP 178

Query: 172 XKFPDLVSLSLYGNKLNRAEVVVQEVSKFKHLKGLWLNNNLVLKECNDKIAGAILKELPE 231
            +FP+LV+LSLYGNKL R E+++QEV KFKHLKGLWLNNN VL+ C+  +AG ILKELPE
Sbjct: 179 ARFPNLVALSLYGNKLTRPELIIQEVIKFKHLKGLWLNNNPVLQNCDGDLAGIILKELPE 238

Query: 232 LEIYNSNFTSNFGEWALGFCAGIYEKDNPASSDHADSPLQSVSTLDISNRNIHNLINKAF 291
           LEIYNS FTSNFGEWALGFCA IY KDNP+++D ADSPL SVS LD+SNRNIHNLINK F
Sbjct: 239 LEIYNSTFTSNFGEWALGFCAEIYGKDNPSNADQADSPLLSVSNLDLSNRNIHNLINKDF 298

Query: 292 SPILFSSLSHLNIHGNPLEQNSVGDLLDLLRRFPCLCSLGVDIPGPLGGSAIEILESLPN 351
           SP+   SLS+LNI GNPLEQ+SV DLLDLLRRF CLCSL VDIPGPLGGSA+EILESLPN
Sbjct: 299 SPVCLPSLSYLNIRGNPLEQSSVTDLLDLLRRFSCLCSLEVDIPGPLGGSAVEILESLPN 358

Query: 352 ISELNGISASQILETSKQVIDSALLPRVSEWTPDEPLADRIVNGMWKYLMTYRLADEEKL 411
           ISELNGI AS+ILE+ K VIDS LLPR+ EWTPDEP+ DRI++ MW+YLMTYRLADEEKL
Sbjct: 359 ISELNGICASKILESGKHVIDSVLLPRLPEWTPDEPIHDRIISAMWQYLMTYRLADEEKL 418

Query: 412 DETSVWYVMDELGSALRHSDEPNFRVAPFLFMPEGNLASAVSFSILWPTQNLQKGDECTR 471
           DETSVWYVMDE GSALRHSDEPNFRVAPFLFMPEGNLASAVSFSILWPT+N+ KGDECTR
Sbjct: 419 DETSVWYVMDEFGSALRHSDEPNFRVAPFLFMPEGNLASAVSFSILWPTRNVWKGDECTR 478

Query: 472 DFLLGIGEDKQRSARLTAWFHTPENYFIQEFEKHNQKLGSTSLIPPTVQSSETRSIHQPD 531
           DFLLGIGEDKQRSARLTAWF+TPENYFIQE+EK++Q+L STSLIPPTVQSSE+RSI   D
Sbjct: 479 DFLLGIGEDKQRSARLTAWFNTPENYFIQEYEKYDQRLQSTSLIPPTVQSSESRSIRPHD 538

Query: 532 GRPLRVYTDIPHVEENLTHPEFAITKEPKDADIIWTCMQIDEDTKKATGITDQQYINQFP 591
            RPLRVYTDIPHVEE LTHPEFAI K+PKDADIIWTC+Q+DE+ KKATGITDQQYINQFP
Sbjct: 539 VRPLRVYTDIPHVEEYLTHPEFAIIKDPKDADIIWTCVQVDEELKKATGITDQQYINQFP 598

Query: 592 FEACLVMKHHLAETIQKALGSPQWLQHTYNLETHLSQLIGDYYLRKREGQDNLWILKPWN 651
           FEACLVMKHHLAETIQKA GSPQWLQ TYNLETHLSQLIGDYY+RKREG DNLWILKPWN
Sbjct: 599 FEACLVMKHHLAETIQKAHGSPQWLQPTYNLETHLSQLIGDYYVRKREGLDNLWILKPWN 658

Query: 652 MARTIDTTVTDNLPAIIRLMETGPKICQKYIEKPALFQGKKFDLRYIVLVRSMHPLEIFL 711
           MARTIDTTVTDNLPAIIRLMETGPKICQKYIE+PALFQGKKFDLRY+VLVRSMHPLEIFL
Sbjct: 659 MARTIDTTVTDNLPAIIRLMETGPKICQKYIEQPALFQGKKFDLRYVVLVRSMHPLEIFL 718

Query: 712 SDCFWVRIANNQYSLERRSLFEYETHFTVMNYRGKINHKNIKDFVKEFEEEHQVKWLDIH 771
           SDCFWVRIANNQYSL + SLFEYETHFTVMNYRG+INHKNIKDFV+EFEEEHQVKWLDIH
Sbjct: 719 SDCFWVRIANNQYSLAKSSLFEYETHFTVMNYRGRINHKNIKDFVREFEEEHQVKWLDIH 778

Query: 772 TRVRNMIRSVFEAAAVAHPEMHSPTSRAMYGVDVMLNSSFQPKLLEVTYCPDCTRACKYD 831
            RVR MIRSVFEAAAVAHPEMHSPTSRA+YGVDVML+SSFQPKLLEVTYCPDCTRACKYD
Sbjct: 779 ARVRTMIRSVFEAAAVAHPEMHSPTSRAIYGVDVMLDSSFQPKLLEVTYCPDCTRACKYD 838

Query: 832 MDIVVGEGGVSKGCDFFNNVFRCLFLDEISQVSPL 866
           MDIVVGEGG++KGCDFFNNVF+CLFL+EISQVS L
Sbjct: 839 MDIVVGEGGIAKGCDFFNNVFKCLFLNEISQVSRL 873