Miyakogusa Predicted Gene

Lj6g3v1187440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1187440.1 CUFF.59218.1
         (357 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g041690.1 | frigida interacting protein | HC | chr2:183167...   618   e-177
Medtr2g041390.1 | frigida interacting protein | HC | chr2:181569...   196   3e-50

>Medtr2g041690.1 | frigida interacting protein | HC |
           chr2:18316731-18309633 | 20130731
          Length = 356

 Score =  618 bits (1593), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 302/357 (84%), Positives = 317/357 (88%), Gaps = 1/357 (0%)

Query: 1   MATERYASPPATTSPEDNALFLDILHEAPLFAHRKAARIVGSVFYCILLAGYATLAIGAT 60
           MATER++S P T S E+NALFLDILHEAPLFAHRK ARI GSV YCILLAGY TLA+GA 
Sbjct: 1   MATERFSSRPPT-SQEENALFLDILHEAPLFAHRKPARIFGSVLYCILLAGYTTLAVGAQ 59

Query: 61  WIFRPVQGLMSPVLCSCDVXXXXXTGIFQQYLVYQVQKIRLQGYYSFSQKLKFIVRIPFA 120
           WIFRPVQGL+SPVLCSCDV     TGIFQQYLVYQVQKIRLQGYYSFSQKLKFIVRIPF+
Sbjct: 60  WIFRPVQGLISPVLCSCDVLLLLLTGIFQQYLVYQVQKIRLQGYYSFSQKLKFIVRIPFS 119

Query: 121 VTAYGTAAMLLVIVWKAYTGFLSISAILRIIMIVEAVCAGCFMSLYIGYIHQYNSLNSHP 180
           +TAYGTAAMLLVIVWK YTG LSIS ILRIIM+VEA+CAGCFMSLYIGYIHQYNSLNSHP
Sbjct: 120 ITAYGTAAMLLVIVWKPYTGSLSISGILRIIMVVEALCAGCFMSLYIGYIHQYNSLNSHP 179

Query: 181 DVXXXXXXXXXXXXXXEGLRYYDGRLSDQQMALLQYQRENLHFLSEEILRLQECLSKYER 240
           DV              EGLRYYDGRLSDQQMALLQYQRENLHFLSEEILRLQE LSKYE 
Sbjct: 180 DVLKSLYSPLQPASSLEGLRYYDGRLSDQQMALLQYQRENLHFLSEEILRLQESLSKYEG 239

Query: 241 TDDRSTPQVDLAHLLAVRDQELRTLSAEMNQVQSELRLARSLIAERDSEIQHVRSTNNQY 300
           TDDRSTPQVDLAHLLA RDQELRT+SAEMNQVQSEL+LARSLIAERDSEIQ VR+TNNQY
Sbjct: 240 TDDRSTPQVDLAHLLAARDQELRTISAEMNQVQSELKLARSLIAERDSEIQSVRTTNNQY 299

Query: 301 VEENERLRAILGEWSTRAAKLERALETERMSNIELQRKISTLRHQSHMSREATEHGA 357
           VEENERLRAILGEWSTRAAKLERALE ERMSNIELQRKI T+R Q+HMS EAT+ GA
Sbjct: 300 VEENERLRAILGEWSTRAAKLERALEAERMSNIELQRKIPTVRSQTHMSVEATDQGA 356


>Medtr2g041390.1 | frigida interacting protein | HC |
           chr2:18156999-18158658 | 20130731
          Length = 129

 Score =  196 bits (498), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 98/113 (86%), Positives = 105/113 (92%)

Query: 245 STPQVDLAHLLAVRDQELRTLSAEMNQVQSELRLARSLIAERDSEIQHVRSTNNQYVEEN 304
           +T QVDLAHLLA RDQELRT+SAEMNQVQSEL+LARSLIAERDSEIQ VR+TNNQYVEEN
Sbjct: 17  ATSQVDLAHLLAARDQELRTISAEMNQVQSELKLARSLIAERDSEIQCVRTTNNQYVEEN 76

Query: 305 ERLRAILGEWSTRAAKLERALETERMSNIELQRKISTLRHQSHMSREATEHGA 357
           ERLRAILGEWSTRAAKLERALE ERMSNIELQRKI T+R Q+HMS EAT+ GA
Sbjct: 77  ERLRAILGEWSTRAAKLERALEAERMSNIELQRKIPTVRSQTHMSVEATDQGA 129