Miyakogusa Predicted Gene

Lj6g3v1177360.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1177360.1 tr|B9VI84|B9VI84_ORYSJ Truncated keratin
associated protein OS=Oryza sativa subsp. japonica GN=pay1
,42.61,7e-17,G-gamma,G-protein gamma-like domain; seg,NULL;
coiled-coil,NULL,CUFF.59209.1
         (167 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g042200.1 | GGL domain protein | HC | chr2:18422927-184197...   153   6e-38
Medtr8g021170.1 | hypothetical protein | LC | chr8:7542560-75400...    92   2e-19
Medtr8g021170.2 | hypothetical protein | LC | chr8:7542560-75400...    90   8e-19
Medtr4g125015.1 | transmembrane protein, putative | HC | chr4:51...    49   2e-06
Medtr1g010050.1 | GGL domain protein | HC | chr1:1715277-1714470...    49   2e-06

>Medtr2g042200.1 | GGL domain protein | HC |
          chr2:18422927-18419772 | 20130731
          Length = 238

 Score =  153 bits (387), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 73/96 (76%), Positives = 83/96 (86%), Gaps = 4/96 (4%)

Query: 8  NTSSREPSS----MPLPSPKAPLGCPDLYGKRRQTAKIQMLEREISFLEEELKSSEGLQP 63
           T +R+PSS    +PLPSPKAP   PDLYGKRR+ AK+QMLEREISFLEEELKSSEG QP
Sbjct: 3  TTPTRDPSSNVMSLPLPSPKAPPEYPDLYGKRREMAKVQMLEREISFLEEELKSSEGFQP 62

Query: 64 ASRCCKEIDDFVIANSDPLLPTSKKNRRSCRFWKWL 99
          AS+CCKEI DFV+ANSDPLLPT+KKNR++CR WKWL
Sbjct: 63 ASKCCKEIADFVMANSDPLLPTTKKNRKTCRLWKWL 98


>Medtr8g021170.1 | hypothetical protein | LC | chr8:7542560-7540059
           | 20130731
          Length = 154

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/100 (49%), Positives = 63/100 (63%), Gaps = 7/100 (7%)

Query: 8   NTSSREPSSMPLPSPKAPL-GCPDLYGKRRQTAKIQMLEREISFLEEELKSSEGLQPASR 66
           N+S+   +S PL  PK+PL G  D +GKR+Q  KIQ+LE+EI  L+EELKS EGL PASR
Sbjct: 6   NSSTVSLTSKPLMCPKSPLPGFVDFHGKRKQMVKIQVLEKEIGLLQEELKSLEGLHPASR 65

Query: 67  CCKEIDDFVIANSDPLLPTSKKNRRSCRFWK------WLC 100
           CC E+D FV + SDP  PT K       ++       W+C
Sbjct: 66  CCIELDAFVGSISDPFTPTRKHTISKSHYFGKKISLPWIC 105


>Medtr8g021170.2 | hypothetical protein | LC |
          chr8:7542560-7540059 | 20130731
          Length = 101

 Score = 90.1 bits (222), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 57/79 (72%), Gaps = 1/79 (1%)

Query: 8  NTSSREPSSMPLPSPKAPL-GCPDLYGKRRQTAKIQMLEREISFLEEELKSSEGLQPASR 66
          N+S+   +S PL  PK+PL G  D +GKR+Q  KIQ+LE+EI  L+EELKS EGL PASR
Sbjct: 6  NSSTVSLTSKPLMCPKSPLPGFVDFHGKRKQMVKIQVLEKEIGLLQEELKSLEGLHPASR 65

Query: 67 CCKEIDDFVIANSDPLLPT 85
          CC E+D FV + SDP  PT
Sbjct: 66 CCIELDAFVGSISDPFTPT 84


>Medtr4g125015.1 | transmembrane protein, putative | HC |
          chr4:51910007-51912248 | 20130731
          Length = 180

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/24 (83%), Positives = 22/24 (91%)

Query: 29 PDLYGKRRQTAKIQMLEREISFLE 52
          PDLYGKRR+ AK+QMLEREI FLE
Sbjct: 28 PDLYGKRREMAKVQMLEREIGFLE 51


>Medtr1g010050.1 | GGL domain protein | HC | chr1:1715277-1714470 |
           20130731
          Length = 125

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 4/85 (4%)

Query: 19  LPSPKAPLGC---PDLYGKRRQTAKIQMLEREISFLEEELKSSEGLQPASRCCKEIDDFV 75
           +P+P A +G    P  YGK R  A I  L  +I+ L+EEL+  E +  +S  C ++   V
Sbjct: 28  VPTPFAQVGTVSFPGFYGKHRLQASISNLNNQINILQEELEKLETIGESSTVCNDVISSV 87

Query: 76  IANSDPLLPTSKKNRRSCRFW-KWL 99
            +  DP+LP  K    +   W +W 
Sbjct: 88  ESMPDPMLPWIKGTVDAGSGWDRWF 112