Miyakogusa Predicted Gene

Lj6g3v1177310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1177310.1 tr|G7IGG7|G7IGG7_MEDTR
Methylthioribose-1-phosphate isomerase OS=Medicago truncatula
GN=MTR_2g042450,85.16,0,IF-2B,Initiation factor 2B-related; no
description,NULL; seg,NULL; Salvage_MtnA,Putative
translation,CUFF.59203.1
         (375 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g042450.1 | methylthioribose-1-phosphate isomerase | HC | ...   586   e-167

>Medtr2g042450.1 | methylthioribose-1-phosphate isomerase | HC |
           chr2:18531206-18527006 | 20130731
          Length = 372

 Score =  586 bits (1511), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 291/374 (77%), Positives = 311/374 (83%), Gaps = 3/374 (0%)

Query: 1   MASSGSNELTGTNTLQSIRYNRGSLQLLDQRKLPLETIYLEIRDSTDGWNAIRDMVVRGX 60
           MASS SN    TN LQ+IRYNRGSLQLLDQ KLPLE++YLEIRDS DGWNAIRDMVVRG 
Sbjct: 1   MASSDSN---ATNMLQAIRYNRGSLQLLDQTKLPLESVYLEIRDSNDGWNAIRDMVVRGA 57

Query: 61  XXXXXXXXXXXXVEVSNLGDFSGSPSDAASFLQNKLEYLVSSRPTAVNLSDAATKLKEVI 120
                       VEVSNL DF+GS  DA  FLQ KL+YLVSSRPTAVNLSDAATKLKE+I
Sbjct: 58  PAIAIAAALSLAVEVSNLDDFNGSTDDAVYFLQKKLDYLVSSRPTAVNLSDAATKLKEII 117

Query: 121 SGAAATASEAKSVFQDYIEAAEIMLVDDVASNRAIGSYGATFIQHQVEKPKLSVLTHCNT 180
           S AAAT SEAK VFQ Y+EAAEIML DDVASNRAIG+YGA+FIQ+Q EK KLSVLTHCNT
Sbjct: 118 SKAAATTSEAKGVFQAYLEAAEIMLEDDVASNRAIGTYGASFIQNQTEKLKLSVLTHCNT 177

Query: 181 GSLATAGYGTALGVIRALHSGGALERAYCTETRPFNQGSRLTAFELVHDKIPXXXXXXXX 240
           GSLATAGYGTALGVIRAL+SGG LERAYCTETRPFNQGSRLTA+ELVHDKIP        
Sbjct: 178 GSLATAGYGTALGVIRALYSGGVLERAYCTETRPFNQGSRLTAYELVHDKIPATLIADSA 237

Query: 241 XXXLMKSXXXXXXXXXXXXXXSNGDTANKIGTYSVALCAKFHNVPFYVAAPLTSIDLSLS 300
              LM++              SNGDTANKIGTYSVALCAKFHNVPF+VAAPLTSIDLSLS
Sbjct: 238 AAALMQAGRVDAVVVGADRVASNGDTANKIGTYSVALCAKFHNVPFFVAAPLTSIDLSLS 297

Query: 301 SGEEIVIEERSPKELLNSRGGLGEQVAASGISVWNPAFDVTPANIISGIITEKGVITKSS 360
           SG++IVIEERSPKELLN RGGLGEQVAASGISVWNPAFDVTPAN+ISGIITEKGVITK+ 
Sbjct: 298 SGQQIVIEERSPKELLNMRGGLGEQVAASGISVWNPAFDVTPANLISGIITEKGVITKTP 357

Query: 361 AADAFDIKAFIQKT 374
           A DAFDIKAF+QKT
Sbjct: 358 AGDAFDIKAFVQKT 371