Miyakogusa Predicted Gene
- Lj6g3v1177290.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1177290.1 Non Characterized Hit- tr|F6HUU4|F6HUU4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,27.92,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; PPR_2,Pentatricopeptide repeat; PPR,Penta,CUFF.59200.1
(297 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 419 e-117
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:... 168 6e-42
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:... 155 6e-38
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf... 152 5e-37
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ... 150 2e-36
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 146 2e-35
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:... 146 2e-35
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:... 146 2e-35
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 145 3e-35
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:... 145 5e-35
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:... 144 8e-35
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:... 143 2e-34
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35... 142 5e-34
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 141 7e-34
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:... 140 1e-33
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 139 4e-33
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 138 7e-33
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:... 136 3e-32
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ... 135 4e-32
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:... 135 5e-32
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 134 7e-32
Medtr4g113830.1 | organelle transcript processing protein, putat... 133 2e-31
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:... 130 2e-30
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 129 5e-30
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 127 1e-29
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:... 127 1e-29
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758... 127 2e-29
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 126 2e-29
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 126 2e-29
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:... 125 4e-29
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 123 2e-28
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ... 123 2e-28
Medtr3g080230.1 | PPR containing plant-like protein | HC | chr3:... 123 2e-28
Medtr3g080230.2 | PPR containing plant-like protein | HC | chr3:... 123 2e-28
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:... 122 4e-28
Medtr3g117150.1 | organelle transcript processing protein, putat... 121 9e-28
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:... 121 1e-27
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 120 2e-27
Medtr1g059720.1 | organelle transcript processing protein, putat... 119 3e-27
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:... 119 4e-27
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 119 4e-27
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 118 7e-27
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 118 8e-27
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:... 117 9e-27
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:... 117 1e-26
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:... 117 1e-26
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 117 1e-26
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 117 2e-26
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 117 2e-26
Medtr4g108660.1 | PPR containing plant-like protein | HC | chr4:... 116 2e-26
Medtr2g013500.1 | PPR containing plant-like protein | HC | chr2:... 116 3e-26
Medtr6g059820.1 | PPR containing plant-like protein | HC | chr6:... 115 3e-26
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 115 5e-26
Medtr5g006420.1 | organelle transcript processing protein, putat... 114 9e-26
Medtr2g019350.1 | PPR containing plant-like protein | HC | chr2:... 114 1e-25
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:... 113 2e-25
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 113 2e-25
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati... 112 4e-25
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 112 4e-25
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 112 5e-25
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 5e-25
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 5e-25
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ... 112 6e-25
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 111 7e-25
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 111 1e-24
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 110 1e-24
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840... 110 1e-24
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:... 110 2e-24
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 110 2e-24
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 109 4e-24
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 4e-24
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 9e-24
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 107 1e-23
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |... 107 1e-23
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:... 107 1e-23
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 107 1e-23
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 107 1e-23
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 107 1e-23
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:... 107 1e-23
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 107 2e-23
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 107 2e-23
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 106 3e-23
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 106 3e-23
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ... 105 4e-23
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:... 105 4e-23
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 105 5e-23
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 105 5e-23
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 105 7e-23
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 104 8e-23
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 104 9e-23
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:... 104 9e-23
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 104 1e-22
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 104 1e-22
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 103 1e-22
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 1e-22
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 2e-22
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 103 2e-22
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 3e-22
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 3e-22
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 3e-22
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 4e-22
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 102 4e-22
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 102 4e-22
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 102 5e-22
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 102 6e-22
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 6e-22
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ... 102 6e-22
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 102 6e-22
Medtr4g074470.1 | PPR containing plant-like protein | HC | chr4:... 101 9e-22
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 101 9e-22
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 101 1e-21
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 1e-21
Medtr4g108030.1 | PPR containing plant-like protein | HC | chr4:... 100 1e-21
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 1e-21
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:... 100 2e-21
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:... 100 2e-21
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1... 100 2e-21
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 100 3e-21
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 100 3e-21
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:... 100 3e-21
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:... 100 3e-21
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:... 99 3e-21
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 99 4e-21
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:... 99 6e-21
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 98 8e-21
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:... 98 9e-21
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:... 98 9e-21
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 98 9e-21
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 98 1e-20
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 97 2e-20
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 2e-20
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 97 2e-20
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:... 97 2e-20
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 97 3e-20
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:... 97 3e-20
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 97 3e-20
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 96 3e-20
Medtr3g063220.1 | PPR containing plant-like protein | HC | chr3:... 96 3e-20
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 96 4e-20
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 96 4e-20
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 96 4e-20
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 96 5e-20
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 96 5e-20
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 96 5e-20
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:... 96 6e-20
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 95 7e-20
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:... 95 7e-20
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 95 9e-20
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 1e-19
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:... 94 1e-19
Medtr3g052720.1 | organelle transcript processing protein, putat... 94 1e-19
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 2e-19
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 2e-19
Medtr5g022740.1 | PPR containing plant-like protein | HC | chr5:... 94 2e-19
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 2e-19
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 93 3e-19
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:... 93 3e-19
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:... 93 3e-19
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 93 4e-19
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 5e-19
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 6e-19
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 92 6e-19
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 92 7e-19
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 8e-19
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:... 92 8e-19
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:... 92 8e-19
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:... 91 1e-18
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:... 91 1e-18
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 91 1e-18
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:... 91 2e-18
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 90 2e-18
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 90 2e-18
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 90 2e-18
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:... 90 3e-18
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 90 3e-18
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:... 90 3e-18
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 89 4e-18
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 89 4e-18
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 89 5e-18
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 5e-18
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465... 89 7e-18
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:... 88 9e-18
Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 1e-17
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 2e-17
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 87 3e-17
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 3e-17
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 4e-17
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 86 6e-17
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:... 85 8e-17
Medtr1g040000.1 | PPR containing plant-like protein | HC | chr1:... 85 9e-17
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 85 1e-16
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 1e-16
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 84 2e-16
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 2e-16
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 2e-16
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:... 84 2e-16
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 83 3e-16
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:... 83 3e-16
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 5e-16
Medtr2g006810.1 | PPR containing plant-like protein | HC | chr2:... 82 5e-16
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 5e-16
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 6e-16
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:... 82 6e-16
Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 7e-16
Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 8e-16
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 9e-16
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 9e-16
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:... 81 1e-15
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:... 81 1e-15
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 1e-15
Medtr4g073930.1 | PPR containing plant-like protein | HC | chr4:... 81 1e-15
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 80 2e-15
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 4e-15
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 5e-15
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:... 79 7e-15
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:... 78 9e-15
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 77 2e-14
Medtr2g026210.1 | PPR containing plant-like protein | HC | chr2:... 77 2e-14
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:... 77 2e-14
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:... 77 2e-14
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 2e-14
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 2e-14
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 77 2e-14
Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC | ... 77 3e-14
Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 3e-14
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 4e-14
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:... 76 5e-14
Medtr4g068900.1 | PPR containing plant-like protein | HC | chr4:... 75 8e-14
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 1e-13
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:... 74 2e-13
Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 2e-13
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 74 2e-13
Medtr3g088825.1 | PPR containing plant-like protein | HC | chr3:... 72 6e-13
Medtr5g031630.1 | PPR containing plant-like protein, putative | ... 72 7e-13
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 72 7e-13
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 72 8e-13
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 8e-13
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 72 8e-13
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 71 1e-12
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:... 71 1e-12
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 71 2e-12
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:... 70 2e-12
Medtr3g408390.1 | PPR containing plant-like protein | HC | chr3:... 70 3e-12
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 69 5e-12
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:... 69 6e-12
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ... 69 7e-12
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 8e-12
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 69 8e-12
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:... 68 1e-11
Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC | ... 68 1e-11
Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 1e-11
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 2e-11
Medtr2g082550.1 | PPR containing plant-like protein, putative | ... 66 3e-11
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 7e-11
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:... 64 2e-10
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:... 63 3e-10
Medtr6g060490.1 | PPR superfamily protein, putative | LC | chr6:... 63 4e-10
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 5e-10
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 6e-10
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 6e-10
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:... 62 9e-10
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 61 1e-09
Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 2e-09
Medtr6g460480.1 | organelle transcript processing protein, putat... 60 2e-09
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 60 2e-09
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 60 2e-09
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 60 2e-09
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 60 2e-09
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:... 60 3e-09
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 60 3e-09
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:... 59 4e-09
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 5e-09
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 1e-08
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 57 2e-08
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 57 2e-08
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 56 3e-08
Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 4e-08
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 56 5e-08
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 56 5e-08
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 55 7e-08
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 55 7e-08
Medtr5g068510.1 | PPR containing plant-like protein | HC | chr5:... 55 8e-08
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 54 2e-07
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 54 2e-07
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 54 2e-07
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 54 2e-07
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 54 2e-07
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 2e-07
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 54 2e-07
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 53 3e-07
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 53 3e-07
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 53 4e-07
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 53 4e-07
>Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:18562024-18564318 | 20130731
Length = 740
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/303 (66%), Positives = 241/303 (79%), Gaps = 6/303 (1%)
Query: 1 MKAQNPIFNHPILKLLQ-KCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYA 59
MK +N IFNHP L+ LQ KC++ NTLKQ+H Q++TTGL+ TYCLSHL+ ISSK YA
Sbjct: 140 MKPKNHIFNHPTLQTLQQKCNNFNTLKQIHTQIITTGLSFQTYCLSHLIKISSKFNLPYA 199
Query: 60 LTIFSSIPNPTVFLYNTLISSFTSHSSQ--IHLAFSLYNRILAHKTLQPNSFTFPSLFKA 117
IF+ I NPT+FLYNTLISS + ++Q IHLAFSLYN+IL +K LQPNSFTFPSLFKA
Sbjct: 200 FKIFNYISNPTIFLYNTLISSLINQTNQNQIHLAFSLYNKILTNKNLQPNSFTFPSLFKA 259
Query: 118 CCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLA 177
CC + WF YGP LH HVLKFL+PP+D+FVQASLLNFYAKYG++CVSR +FD+I+EPDLA
Sbjct: 260 CCSNQSWFHYGPLLHTHVLKFLQPPFDNFVQASLLNFYAKYGKMCVSRYIFDRINEPDLA 319
Query: 178 TWNTLLXX-XXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
TWN +L +DAD SLE+LYLF DMQ+ RPNEVT+VALISACSNL
Sbjct: 320 TWNVILNAYARSSSYHSYSNSFDDADFSLESLYLFRDMQVIGIRPNEVTIVALISACSNL 379
Query: 237 GALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL--TDRDTFCYNA 294
GA+SQG W HC++LRN +K+NRFVGTA VDMYSKCGCLNLACQ+FD++ DRD+FCY A
Sbjct: 380 GAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTA 439
Query: 295 MIG 297
MIG
Sbjct: 440 MIG 442
>Medtr5g043780.1 | PPR containing plant-like protein | HC |
chr5:19239453-19241320 | 20130731
Length = 525
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 170/311 (54%), Gaps = 33/311 (10%)
Query: 13 LKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSK-----LASTYALTIFSSIP 67
L LL+KC S+ LKQ HAQ+ TTGL +T+ LS +L S + TYA +F I
Sbjct: 9 LVLLEKCKSMKHLKQAHAQVFTTGLENNTFALSRVLAFCSSHKHHHESLTYACRVFEQIQ 68
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
NPTV +YNTLI +F +++ A ++ ++L L+P+++T P + KA CG+ H +
Sbjct: 69 NPTVCIYNTLIKAFLV-NNKFKSALQVFVKML-QSELKPDNYTIPYVLKA-CGTFHDCSF 125
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G +H + K L +D +V SL+ Y +G + +R +FD+I ++ +W+ ++
Sbjct: 126 GKMIHGYSSK-LGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYA 184
Query: 188 XXXXXXXXXXLEDA----DLSL---------------EALYLFCDMQMSRRRPNEVTLVA 228
D D + E+LYLF MQ++ P+E V+
Sbjct: 185 KVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVS 244
Query: 229 LISACSNLGALSQGVWTHCYLLRNNLK---LNRFVGTALVDMYSKCGCLNLACQLFDQLT 285
++SAC++LGAL GVW H +L N LK L+ + T+L+DMY+KCG L LA +LFD +
Sbjct: 245 ILSACAHLGALEIGVWIHQHL--NQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMN 302
Query: 286 DRDTFCYNAMI 296
RD C+NAMI
Sbjct: 303 MRDVVCWNAMI 313
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 26/234 (11%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLY-NRILAHKTLQPNSFTFPSLFKA 117
A F P ++ +IS + +S SLY R++ + P+ F S+ A
Sbjct: 192 ARLFFDEAPEKDKGIWGAMISGYVQNSC---FKESLYLFRLMQLTDIVPDESIFVSILSA 248
Query: 118 CCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLA 177
C G + G +H H+ + P + SLL+ YAK G L +++ LFD ++ D+
Sbjct: 249 CAHLGA-LEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVV 307
Query: 178 TWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLG 237
WN ++ AL LF DM+ +P+++T +A+ +ACS G
Sbjct: 308 CWNAMISGMAMHGDGKG------------ALKLFYDMEKVGVKPDDITFIAVFTACSYSG 355
Query: 238 ALSQGVWTHCYLLRNNLKLNRFVGTA-----LVDMYSKCGCLNLACQLFDQLTD 286
+G+ LL + V + LVD+ S+ G A + ++T+
Sbjct: 356 MAYEGL----MLLDKMCSVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITN 405
>Medtr5g091640.1 | PPR containing plant-like protein | HC |
chr5:39962522-39960655 | 20130731
Length = 542
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 165/328 (50%), Gaps = 54/328 (16%)
Query: 7 IFNHPILKLLQK-CHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST--YALTIF 63
I NHP L +LQ C ++N Q++ ++ TGL L+ + LT + + YA +F
Sbjct: 25 ISNHPCLTMLQNHCTTINHFHQIYPHIIKTGLTLNPIASTRALTFCASPSGNINYAYKLF 84
Query: 64 SSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
+PNP ++ +NT+I +F S SS A SL+ +L + +QP T+PS+FKA GH
Sbjct: 85 VRMPNPNLYSWNTIIRAF-SRSSTPQFAISLFVDML-YSQIQPQYLTYPSVFKAYAQLGH 142
Query: 124 WFQYGPPLHAHVLKF---------------------------------LEPPYDHFVQA- 149
YG LH V+K LE YDH V A
Sbjct: 143 A-HYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLEL-YDHDVVAI 200
Query: 150 -SLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEAL 208
S++ YAK G + SR LFD + +WN+++ + + L +EAL
Sbjct: 201 NSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGY-----------VRNGKL-MEAL 248
Query: 209 YLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMY 268
LF MQ+ +E T+V+L++AC++LGAL G W H Y+ RN+ +LN V TA++DMY
Sbjct: 249 ELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMY 308
Query: 269 SKCGCLNLACQLFDQLTDRDTFCYNAMI 296
KCG + A ++F+ R C+N++I
Sbjct: 309 CKCGSVENAVEVFETCPRRGLSCWNSII 336
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 106/232 (45%), Gaps = 30/232 (12%)
Query: 61 TIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCG 120
+F + T +N++IS + + ++ A L+N++ + + + FT SL AC
Sbjct: 218 NLFDDMITRTSVSWNSMISGYV-RNGKLMEALELFNKMQV-EGFEVSEFTMVSLLNACAH 275
Query: 121 SGHWFQYGPPLHAHVLKFLEPPYDHF-----VQASLLNFYAKYGRLCVSRCLFDQISEPD 175
G Q+G +H ++ + +HF V ++++ Y K G + + +F+
Sbjct: 276 LGA-LQHGKWVHDYIKR------NHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRG 328
Query: 176 LATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR-RPNEVTLVALISACS 234
L+ WN+++ L EA F ++ S+ +P+ V+ + +++AC
Sbjct: 329 LSCWNSIIIG------------LAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACK 376
Query: 235 NLGALSQGVWTHCYLLRNNLKLNRFVG--TALVDMYSKCGCLNLACQLFDQL 284
+LGA+++ + L+ N ++ + T +VD+ + G L A +L +
Sbjct: 377 HLGAINKA-RDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGM 427
>Medtr0011s0300.1 | PPR containing plant-like protein | HC |
scaffold0011:236494-238095 | 20130731
Length = 533
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 156/317 (49%), Gaps = 40/317 (12%)
Query: 15 LLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST----YALTIFSSIP--N 68
L Q C+SL LKQ+HA +L + Y L+ +L++++ T YA +IF ++ N
Sbjct: 10 LAQNCNSLTQLKQLHAHILRCHIQHSPYALAPILSVAATSNYTSFFLYARSIFHNLTHRN 69
Query: 69 PTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC---------C 119
F++NT+I ++ + S H A S Y +L + N++TFP L K+C C
Sbjct: 70 RNTFIHNTMIRAYLQNHSPTH-AVSCYTTML-QNGIAVNNYTFPPLIKSCTALIAASSKC 127
Query: 120 GSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATW 179
S G +H HV+ F D +V + + FY+ G L +R LFDQ D+ W
Sbjct: 128 ASS--VMIGCLVHCHVVLF-GLTNDAYVVSGFIEFYSALGELRKARVLFDQTGRKDVVLW 184
Query: 180 NTLLXXXXXXXXXXXXXXLED-------------------ADLSLEALYLFCDMQMSRRR 220
++ + D E L LF +MQ R
Sbjct: 185 TAMIDGYGKIGDVESAREMFDEMPERNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEGVR 244
Query: 221 PNEVTLVALISACSNLGALSQGVWTHCYLLR-NNLKLNRFVGTALVDMYSKCGCLNLACQ 279
PN+ LV +++AC++LGAL+QG+W H Y R + + N + TALVDMYSKCGC+ A
Sbjct: 245 PNDSVLVTVLTACAHLGALTQGMWVHSYARRFDRVSSNPILATALVDMYSKCGCVESALS 304
Query: 280 LFDQLTDRDTFCYNAMI 296
+FD ++D+D +NAMI
Sbjct: 305 VFDGISDKDVGAWNAMI 321
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 38/237 (16%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F +P V ++ +++++ S S+ L+ + + ++PN ++ AC
Sbjct: 200 AREMFDEMPERNVVSWSAMMAAY-SRVSEFREVLDLFLE-MQSEGVRPNDSVLVTVLTAC 257
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
G Q G +H++ +F + + +L++ Y+K G + + +FD IS+ D+
Sbjct: 258 AHLGALTQ-GMWVHSYARRFDRVSSNPILATALVDMYSKCGCVESALSVFDGISDKDVGA 316
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
WN ++ DA SLE LF M + +PNE T VA+++AC
Sbjct: 317 WNAMISGVALNG---------DARKSLE---LFQQMIVCGNKPNETTFVAVLTAC----- 359
Query: 239 LSQGVWTHCYLLRNNLKL-NRFVGT-----------ALVDMYSKCGCLNLACQLFDQ 283
TH ++R L+L GT +VD+ S+ G + A + ++
Sbjct: 360 ------THARMVREGLRLFEEMSGTYGVEPCAEHYACVVDLLSRSGMVEEAERFIEE 410
>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20818019-20812038 | 20130731
Length = 1056
Score = 150 bits (378), Expect = 2e-36, Method: Composition-based stats.
Identities = 95/310 (30%), Positives = 153/310 (49%), Gaps = 23/310 (7%)
Query: 9 NHPILK-LLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFSSIP 67
NH L L+ C S+N +KQ HA ++TT + L + + TYA +F IP
Sbjct: 11 NHSKLSSLIDLCKSINQIKQTHANLITTAQITLPVIANKFLKNVALASLTYAHKLFDQIP 70
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
P +F+YNT+I S + + +++ ++ PN ++F F AC G+G +
Sbjct: 71 QPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGAC-GNGMCVRE 129
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G + H +K + + FV +L+ + K+GR+ +R +FD + D +WNT++
Sbjct: 130 GEQVFTHAVK-VGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYV 188
Query: 188 XXXXXXXXXXLED-------------------ADLSLEALYLFCDMQMSRRRPNEVTLVA 228
L D +EAL F M S +PNE T+V+
Sbjct: 189 GSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVS 248
Query: 229 LISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLF-DQLTDR 287
++ACSNL AL QG W H Y+ R+N+K+N + +L+DMY+KCG ++ A +F + R
Sbjct: 249 ALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKR 308
Query: 288 DTFCYNAMIG 297
+ +NAMIG
Sbjct: 309 KVWPWNAMIG 318
>Medtr5g018690.1 | PPR containing protein | HC |
chr5:6968759-6971652 | 20130731
Length = 663
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 144/284 (50%), Gaps = 19/284 (6%)
Query: 15 LLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFL 73
L+ +C SL LK VHAQ++ GLA L L++ S +L YA +F IP P F+
Sbjct: 42 LIDQCISLKQLKHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFM 101
Query: 74 YNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCG-SGHWFQYGPPLH 132
+N LI +++ S I + LY R++ L PN FT P + KAC S +W G +H
Sbjct: 102 FNHLIKGYSNSSDPIK-SLLLYRRMVCDGIL-PNQFTIPFVLKACAAKSCYWL--GVCVH 157
Query: 133 AHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXX 192
A K L VQ ++LN Y G + +R +FD ISE L +WN+++
Sbjct: 158 AQSFK-LGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGR- 215
Query: 193 XXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRN 252
S EA+ +F +MQ P+ TLV L+S + G G + H +++
Sbjct: 216 -----------SEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVT 264
Query: 253 NLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
++++ V AL+DMY+KCG L A +FDQ+ D+D + MI
Sbjct: 265 GIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMI 308
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 133/293 (45%), Gaps = 30/293 (10%)
Query: 28 VHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFSSIPNPTVFLYNTLISSFT--SH 84
VHAQ G+ H + +L I T A +F I T+ +N++I+ ++
Sbjct: 156 VHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGR 215
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAH-VLKFLEPPY 143
S + L F R + L+P+ FT L G+ F G +H H V+ +E
Sbjct: 216 SEEAVLMF----REMQEVGLEPDVFTLVGLLSVSTKHGN-FDLGRFVHLHMVVTGIE--I 268
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXL----- 198
D V +L++ YAK G L ++ +FDQ+ + D+ +W ++
Sbjct: 269 DSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMP 328
Query: 199 --------------EDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVW 244
L EA+ LF M S N+ TLVA++S+CS++G L+ G
Sbjct: 329 GKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQ 388
Query: 245 THCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
H Y+ NN+ L+ + A++DMY+KCG L A +F + +++ +N +IG
Sbjct: 389 AHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIG 441
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 124/303 (40%), Gaps = 37/303 (12%)
Query: 5 NPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFS 64
+ I + ++ + KC +L K V QML + T C+ + + AL F+
Sbjct: 269 DSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWT-CMINAYANHGLIDC--ALEFFN 325
Query: 65 SIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHW 124
+P V +N++I A L+ R + + N T ++ +C G
Sbjct: 326 QMPGKNVVSWNSIIWCHVQEGLYAE-AVDLFYR-MCDSGVMANDTTLVAILSSCSHMGD- 382
Query: 125 FQYGPPLHAHVLKFLEPPYDHFVQAS------LLNFYAKYGRLCVSRCLFDQISEPDLAT 178
G H+++ +D+ + S +++ YAK G L + +F + E + +
Sbjct: 383 LALGKQAHSYI-------FDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVS 435
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
WN ++ L EA+ +F MQ S P+E+T L+SACS+ G
Sbjct: 436 WNVIIGA------------LALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGL 483
Query: 239 LSQGVWTHCYLLRN---NLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDR-DTFCYNA 294
+ G H + + N + + +VD+ + G L A L ++ + D ++A
Sbjct: 484 VDTG--QHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSA 541
Query: 295 MIG 297
++G
Sbjct: 542 LLG 544
>Medtr3g109380.2 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 158/305 (51%), Gaps = 27/305 (8%)
Query: 16 LQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFSSIPNPTVFLY 74
L+ C + LK++HA ++ L+ + ++ +L L +YA +F + +P +F Y
Sbjct: 17 LKNCFKITQLKKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQLLHPNIFTY 76
Query: 75 NTLISSFTSHSSQIHLAFSLYNRILAHKT--LQPNSFTFPSLFKACCGSGHWFQYGPPLH 132
N +I ++ +H+ A S++ ++L H T + P+ FTFP + K+C G + G +H
Sbjct: 77 NAIIRTY-AHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGI-LCHRLGMQVH 134
Query: 133 AHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXX 192
V KF + + +L++ Y K+G L + +F+++S D+ +WN+L+
Sbjct: 135 GLVYKF-GADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQM 193
Query: 193 XXXXXLEDADLSL--------------------EALYLFCDMQMSRRRPNEVTLVALISA 232
L D D+ + +AL +F +MQM P+E++++A++ A
Sbjct: 194 NSARELFD-DMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPA 252
Query: 233 CSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCY 292
C+ LGAL G W H Y +N + AL++MY+KCGC++ A LFDQL ++D +
Sbjct: 253 CAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISW 312
Query: 293 NAMIG 297
+ MIG
Sbjct: 313 STMIG 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 129/317 (40%), Gaps = 62/317 (19%)
Query: 19 CHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTL 77
CH L QVH + G H + L+ + +K T A +F + + V +N+L
Sbjct: 126 CHRLGM--QVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSL 183
Query: 78 ISSFTSHSSQIHLAFSLYN------------------------------RILAHKTLQPN 107
I + Q++ A L++ R + ++P+
Sbjct: 184 IFGYVK-LGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPD 242
Query: 108 SFTFPSLFKACCGSGHWFQYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSR 165
+ ++ AC G + G +H + K FL + +L+ YAK G + +
Sbjct: 243 EISIIAVLPACAQLGA-LEVGKWIHMYADKNGFLRKTG---ICNALIEMYAKCGCIDEAW 298
Query: 166 CLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVT 225
LFDQ+ E D+ +W+T++ L + EA+ LF +M R PNE+T
Sbjct: 299 NLFDQLVEKDVISWSTMIGG------------LANHGKGYEAIQLFEEMCKVRVAPNEIT 346
Query: 226 LVALISACSNLGALSQG-----VWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQL 280
+ ++ ACS+ G +G V + Y + ++ L+D+ + GCL A
Sbjct: 347 FLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHY----GCLIDLLGRSGCLGQALDT 402
Query: 281 FDQLTDR-DTFCYNAMI 296
++ + D+ +N+++
Sbjct: 403 ISKMPIKPDSRIWNSLL 419
>Medtr3g109380.1 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 158/305 (51%), Gaps = 27/305 (8%)
Query: 16 LQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFSSIPNPTVFLY 74
L+ C + LK++HA ++ L+ + ++ +L L +YA +F + +P +F Y
Sbjct: 17 LKNCFKITQLKKIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQLLHPNIFTY 76
Query: 75 NTLISSFTSHSSQIHLAFSLYNRILAHKT--LQPNSFTFPSLFKACCGSGHWFQYGPPLH 132
N +I ++ +H+ A S++ ++L H T + P+ FTFP + K+C G + G +H
Sbjct: 77 NAIIRTY-AHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGI-LCHRLGMQVH 134
Query: 133 AHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXX 192
V KF + + +L++ Y K+G L + +F+++S D+ +WN+L+
Sbjct: 135 GLVYKF-GADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQM 193
Query: 193 XXXXXLEDADLSL--------------------EALYLFCDMQMSRRRPNEVTLVALISA 232
L D D+ + +AL +F +MQM P+E++++A++ A
Sbjct: 194 NSARELFD-DMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPA 252
Query: 233 CSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCY 292
C+ LGAL G W H Y +N + AL++MY+KCGC++ A LFDQL ++D +
Sbjct: 253 CAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISW 312
Query: 293 NAMIG 297
+ MIG
Sbjct: 313 STMIG 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 129/317 (40%), Gaps = 62/317 (19%)
Query: 19 CHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTL 77
CH L QVH + G H + L+ + +K T A +F + + V +N+L
Sbjct: 126 CHRLGM--QVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSL 183
Query: 78 ISSFTSHSSQIHLAFSLYN------------------------------RILAHKTLQPN 107
I + Q++ A L++ R + ++P+
Sbjct: 184 IFGYVK-LGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPD 242
Query: 108 SFTFPSLFKACCGSGHWFQYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSR 165
+ ++ AC G + G +H + K FL + +L+ YAK G + +
Sbjct: 243 EISIIAVLPACAQLGA-LEVGKWIHMYADKNGFLRKTG---ICNALIEMYAKCGCIDEAW 298
Query: 166 CLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVT 225
LFDQ+ E D+ +W+T++ L + EA+ LF +M R PNE+T
Sbjct: 299 NLFDQLVEKDVISWSTMIGG------------LANHGKGYEAIQLFEEMCKVRVAPNEIT 346
Query: 226 LVALISACSNLGALSQG-----VWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQL 280
+ ++ ACS+ G +G V + Y + ++ L+D+ + GCL A
Sbjct: 347 FLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHY----GCLIDLLGRSGCLGQALDT 402
Query: 281 FDQLTDR-DTFCYNAMI 296
++ + D+ +N+++
Sbjct: 403 ISKMPIKPDSRIWNSLL 419
>Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-8426025 |
20130731
Length = 1026
Score = 145 bits (367), Expect = 3e-35, Method: Composition-based stats.
Identities = 96/295 (32%), Positives = 149/295 (50%), Gaps = 28/295 (9%)
Query: 10 HPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLL---TISSKLASTYALTIFSSI 66
+P+L +L++C SL LKQ+ AQM++TGL + + S L+ +S Y I I
Sbjct: 58 NPLLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRI 117
Query: 67 PNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQ 126
VF +N I + S I F LY R+L TL+P++ T+P L K CCG Q
Sbjct: 118 KELNVFSWNAAIRGYV-ESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCG-----Q 171
Query: 127 Y----GPPLHAHVLKF-LEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
Y G + HVLKF E D FV + + G L V+ +F++ DL TWN+
Sbjct: 172 YSSCLGLGVLGHVLKFGFE--CDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNS 229
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
++ L++EA+ ++ +M+ + RPNE+T++ +IS+CS + L+
Sbjct: 230 MITGCV------------KRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNL 277
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G HCY+ + L+ + AL+DMY KCG L A LFD + + + M+
Sbjct: 278 GKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMV 332
Score = 108 bits (269), Expect = 9e-24, Method: Composition-based stats.
Identities = 82/301 (27%), Positives = 136/301 (45%), Gaps = 34/301 (11%)
Query: 19 CHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFSSIPNPTVFLYNTLI 78
C L L V + +H ++ LL+ +L+ Y +F+ + +N++I
Sbjct: 175 CLGLGVLGHVLKFGFECDIFVHNASITMLLS-CGELSVAY--DVFNKSRVRDLVTWNSMI 231
Query: 79 SSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHA----H 134
+ I A +Y + A K ++PN T + +C G H H
Sbjct: 232 TGCVKRGLAIE-AIKIYKEMEAEK-VRPNEITMIGMISSCSQVQD-LNLGKEFHCYIKEH 288
Query: 135 VLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXX 194
L+F P + +L++ Y K G L +R LFD +++ L +W T++
Sbjct: 289 GLEFTIP-----LTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDV 343
Query: 195 XXXL-------------------EDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSN 235
+ A EAL LF +MQ+ P++VT+V +SACS
Sbjct: 344 AREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQ 403
Query: 236 LGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAM 295
LGAL G+W H Y+ R+ L ++ +GTALVDMY+KCG + A Q+F+++ R+ + A+
Sbjct: 404 LGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAV 463
Query: 296 I 296
I
Sbjct: 464 I 464
>Medtr7g108530.1 | PPR containing plant-like protein | HC |
chr7:44212645-44210679 | 20130731
Length = 467
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 157/289 (54%), Gaps = 21/289 (7%)
Query: 12 ILKLLQK-CHSLNTLKQVHAQMLTTGLALHTYCLSHLLTIS-SKLASTYALTIFSS-IPN 68
++KLL+ C + +KQ+ AQ++ L HT HL+T S S Y +F+ IP
Sbjct: 12 VVKLLKSFCRTQIHVKQIQAQIIIHNLQSHTTIAEHLITASQSHNLLNYVSPLFTHLIPK 71
Query: 69 PTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHK-TLQPNSFTFPSLFKACCGSGHWFQY 127
P VF++N+LI +F SHS + SLY+ + HK ++ PN+FTFP LFK+ S H F
Sbjct: 72 PHVFIFNSLIRAF-SHSHIPNTPLSLYSHM--HKNSILPNNFTFPFLFKSLSDS-HDFVQ 127
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
++ HV+K L D +V SLL+ YA YG L + R LFD++ + D+ +W ++
Sbjct: 128 SQCVYTHVIK-LGYVNDIYVNNSLLDVYASYGCLELCRQLFDEMPQRDVVSWTVMIMGY- 185
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
+ +AL +F MQ PN VT+V +SAC++ A+ GVW
Sbjct: 186 -----------RNGGKYNDALLVFEQMQYGGVVPNRVTMVNALSACASSCAIEMGVWIDD 234
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ RN +L+ +GTAL+DMY KCG + ++F + +++ F N +I
Sbjct: 235 MVRRNGWELDVILGTALIDMYVKCGRVEEGLKVFCDMKEKNVFTLNVVI 283
>Medtr5g020650.1 | PPR containing plant-like protein | HC |
chr5:7912169-7910613 | 20130731
Length = 518
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 155/309 (50%), Gaps = 30/309 (9%)
Query: 13 LKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS---TYALTIFSSIPNP 69
+ LL++C ++ LKQ+H Q+L G H +S LLT + + TYA +F I +P
Sbjct: 15 MSLLERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSP 74
Query: 70 TVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGP 129
++NT+I ++ S+S+ A LY+++L H ++ N++TFP L KAC +
Sbjct: 75 NTVMWNTMIRAY-SNSNDPEEALLLYHQML-HHSIPHNAYTFPFLLKACSALSALAET-H 131
Query: 130 PLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
+H ++K F Y SLL YA G + + LFD + D+ +WNT++
Sbjct: 132 QIHVQIIKRGFGSEVY---ATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYI 188
Query: 188 XXXXXXXXXXLEDA-------------------DLSLEALYLFCDMQMSRRRPNEVTLVA 228
+ A + EAL L M ++ +P+++TL
Sbjct: 189 KCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSC 248
Query: 229 LISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRD 288
+SAC+ LGAL QG W H Y+ +N +K++ +G AL+DMY KCG + A +F +L +
Sbjct: 249 SLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKC 308
Query: 289 TFCYNAMIG 297
+ + A+IG
Sbjct: 309 VYTWTAIIG 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 85/196 (43%), Gaps = 21/196 (10%)
Query: 104 LQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQAS-LLNFYA--KYGR 160
LQ N SL + C G Q +H +LK + H + S LL YA ++
Sbjct: 7 LQLNVEQTMSLLERCSNIGELKQ----IHGQLLK--KGTIRHKLTVSRLLTTYASMEFSN 60
Query: 161 LCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRR 220
L +R +FD+IS P+ WNT++ +++ EAL L+ M
Sbjct: 61 LTYARMVFDRISSPNTVMWNTMIRAY------------SNSNDPEEALLLYHQMLHHSIP 108
Query: 221 PNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQL 280
N T L+ ACS L AL++ H +++ + +L+ +Y+ G + A L
Sbjct: 109 HNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVL 168
Query: 281 FDQLTDRDTFCYNAMI 296
FD L RD +N MI
Sbjct: 169 FDLLPSRDIVSWNTMI 184
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 105/264 (39%), Gaps = 53/264 (20%)
Query: 15 LLQKCHSLNTLK---QVHAQMLTTGLALHTYCLSHLL---TISSKLASTYALTIFSSIPN 68
LL+ C +L+ L Q+H Q++ G Y + LL IS + S + L F +P+
Sbjct: 117 LLKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVL--FDLLPS 174
Query: 69 PTVFLYNTLISSFTSHSSQIHLAFSLYN------------------RILAHKT------- 103
+ +NT+I + + +A+ ++ R HK
Sbjct: 175 RDIVSWNTMIDGYIK-CGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQ 233
Query: 104 -----LQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKY 158
++P+ T AC G G + G +H ++ K + D + +L++ Y K
Sbjct: 234 MLVAGIKPDKITLSCSLSACAGLGA-LEQGKWIHTYIGKN-KIKIDPVLGCALIDMYVKC 291
Query: 159 GRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSR 218
G + + +F ++ + + TW ++ EAL F MQ +
Sbjct: 292 GEMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKGS------------EALDWFTQMQKAG 339
Query: 219 RRPNEVTLVALISACSNLGALSQG 242
+P T A+++ACS+ G + +G
Sbjct: 340 IKPTSFTFTAVLTACSHTGLVEEG 363
>Medtr7g093900.2 | PPR containing plant-like protein | HC |
chr7:37366165-37359102 | 20130731
Length = 663
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 157/295 (53%), Gaps = 19/295 (6%)
Query: 5 NPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST---YALT 61
N I +P L +++ C ++ LKQ+ A+M TG+ H + +S ++ + S YA T
Sbjct: 40 NVIITNPTLLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHT 99
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS 121
IF+ + P F++NT+I + + I AFS + + + ++ +S +F KAC
Sbjct: 100 IFNRVEQPNTFMWNTMIRGYQNARKPI-FAFSFFVYMFQLR-VEMDSRSFVFALKACQQF 157
Query: 122 GHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
F+ G ++ V K + + V+ L++FYA+ G L +R +FD+ S+ D+ TW T
Sbjct: 158 ETVFE-GESVYCVVWK-MGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTT 215
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
++ D S EA+ +F M +S PNEVTL+A++SACS++G L
Sbjct: 216 MIDGYAAH------------DCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEM 263
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G H + N++ + + AL+DMY KC CL A +LFD++ +D + + +M+
Sbjct: 264 GKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMV 318
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 50/272 (18%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSH--SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFK 116
A +F + V + T+I + +H S + F L +L+H ++PN T ++
Sbjct: 198 ARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELM--LLSH--VEPNEVTLIAVVS 253
Query: 117 ACCGSGHWFQYGPPLHAHV--------LKFLEPPYDHFVQ-------------------- 148
AC G+ + G +H V L D +V+
Sbjct: 254 ACSDMGN-LEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVY 312
Query: 149 --ASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLE 206
S++N YAK G L +R FDQ + W+ ++ + E
Sbjct: 313 SWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQN------------NKPKE 360
Query: 207 ALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNL-KLNRFVGTALV 265
+L LF +M P E TLV+++SAC L L+ G W H Y + + L+ + A+V
Sbjct: 361 SLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIV 420
Query: 266 DMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
DMY+KCG ++ A ++F + +R+ +N MI
Sbjct: 421 DMYAKCGSIDAATEVFSTMPERNLISWNTMIA 452
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/272 (20%), Positives = 118/272 (43%), Gaps = 21/272 (7%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
+L + KC L +++ +M T + Y + ++ +K A F P
Sbjct: 286 LLDMYVKCDCLVDARELFDRMATKDV----YSWTSMVNGYAKCGDLESARRFFDQTPRKN 341
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
++ +I+ + S +++ + L++ ++ + + P T S+ AC G G
Sbjct: 342 AVCWSAMIAGY-SQNNKPKESLKLFHEMM-ERGVVPIEHTLVSVLSAC-GQLTCLNLGDW 398
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+H + + P ++ ++++ YAK G + + +F + E +L +WNT++
Sbjct: 399 IHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANG 458
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
+ +A+ +F M+ PN +T V+L++ACS+ G +S+G +
Sbjct: 459 R------------AKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNME 506
Query: 251 RN-NLKLNRFVGTALVDMYSKCGCLNLACQLF 281
R +K R +VD+ + G L A +L
Sbjct: 507 RKYGIKPERGHYACMVDLLGRTGLLEEAYKLI 538
>Medtr6g093170.1 | PPR containing protein | HC |
chr6:35177726-35180122 | 20130731
Length = 608
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 158/290 (54%), Gaps = 21/290 (7%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST----YALTIFSSIP 67
++ LL+ C S+ L+Q+H+ + TTGL T+ L+ L ++S L + Y+L+IF+
Sbjct: 5 LISLLKNCKSIFHLQQIHSLIFTTGLHQDTHTLNKLFSVSIHLNNNNYFHYSLSIFNHTL 64
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
+P++FLYN LI SF +S SL+N+ L L P+++T+P + KA F+
Sbjct: 65 HPSLFLYNLLIKSFFKRNS-FQTLISLFNQ-LRLNGLYPDNYTYPFVLKAVAFIAD-FRQ 121
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G +HA V K D++V S ++ YA+ GR+ R LFD+ISE D +WN ++
Sbjct: 122 GTKIHAFVFK-TGLDSDYYVSNSFMDMYAELGRIDFVRKLFDEISERDSVSWNVMISGCV 180
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQM-SRRRPNEVTLVALISACSNLGALSQGVWTH 246
EA+ +F M++ S + +E T+V+ ++AC+ + G H
Sbjct: 181 KCRRFE------------EAVEVFQRMRVDSNEKISEATVVSSLTACAASRNVEVGKEIH 228
Query: 247 CYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+++ L +G AL+DMY KCG +++A ++FD + +++ C+ +M+
Sbjct: 229 GFIIEKELDFTMRMGNALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMV 278
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 137/290 (47%), Gaps = 23/290 (7%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSHS 85
++HA + TGL Y + + + ++L + +F I +N +IS
Sbjct: 124 KIHAFVFKTGLDSDYYVSNSFMDMYAELGRIDFVRKLFDEISERDSVSWNVMISGCVK-C 182
Query: 86 SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDH 145
+ A ++ R+ + + T S AC S + + G +H +++ E +
Sbjct: 183 RRFEEAVEVFQRMRVDSNEKISEATVVSSLTACAASRN-VEVGKEIHGFIIE-KELDFTM 240
Query: 146 FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDA---- 201
+ +LL+ Y K G + V+R +FD + E ++ W +++ L D
Sbjct: 241 RMGNALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVTGYVSCGELDKARDLFDKSPTR 300
Query: 202 DLSL---------------EALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTH 246
D+ L EA+ LF +MQ+ +P++ +VAL++ C+ LG L G W H
Sbjct: 301 DVVLWTAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFIVVALLTCCAQLGTLEHGRWIH 360
Query: 247 CYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
Y+ N + ++ VGT+L++MY+KCGC+ + ++F+ L ++DT + ++I
Sbjct: 361 DYVRENRIVVDAVVGTSLIEMYAKCGCVEKSLEVFNGLKEKDTASWTSII 410
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 112/246 (45%), Gaps = 29/246 (11%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F P V L+ +I+ + + + A +L+ + + ++P+ F +L C
Sbjct: 290 ARDLFDKSPTRDVVLWTAMINGYVQFN-RFDEAVALFEEMQV-RGVKPDKFIVVALL-TC 346
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCL--FDQISEPDL 176
C ++G +H +V + D V SL+ YAK G CV + L F+ + E D
Sbjct: 347 CAQLGTLEHGRWIHDYVREN-RIVVDAVVGTSLIEMYAKCG--CVEKSLEVFNGLKEKDT 403
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
A+W +++ ++EAL LF +M++ +P++VT + L++ACS+
Sbjct: 404 ASWTSIICGLAMNGK------------TIEALELFEEMKIFGAKPDDVTFIVLLNACSHG 451
Query: 237 GALSQG-----VWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFC 291
G + +G + Y + NL+ +D+ + G L+ A +L +L D+
Sbjct: 452 GLVEEGHKLFHSMSCIYGIEPNLEHY----GCFIDLLGRAGLLHEAEELIKKLPDQKNET 507
Query: 292 YNAMIG 297
A+ G
Sbjct: 508 IVAIYG 513
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/298 (33%), Positives = 158/298 (53%), Gaps = 30/298 (10%)
Query: 5 NPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHT-YCLSHLLTISSKLAS-TYALTI 62
+PIF +L LL++C S TL+Q+H Q +H+ + +HLL+ S L TY+ I
Sbjct: 19 SPIF--LLLSLLKQCPSTKTLQQIHTQ-----FTIHSIHKPNHLLSQSISLKDFTYSTLI 71
Query: 63 FSSI-PNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQ--PNSFTFPSLFKACC 119
FS I P+P + +N ++ + T+ L LY+++ KTL PN+FTFP +F AC
Sbjct: 72 FSHITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQM---KTLNISPNNFTFPFVFLACA 128
Query: 120 GSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATW 179
+ H V K L DH S++ Y + G V+R +FD+I+E DL +W
Sbjct: 129 NLEE-IRMARLAHCEVFK-LGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSW 186
Query: 180 NTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACSNLGA 238
N+LL + EA+ +F + + S P+E++LV+++ AC LG
Sbjct: 187 NSLLSGYAKL------------GFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGD 234
Query: 239 LSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L G W +++ +K+N ++G+AL+ MYSKCG L + ++FD + RD +NA I
Sbjct: 235 LELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAI 292
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 134/282 (47%), Gaps = 19/282 (6%)
Query: 19 CHSLNTLKQV---HAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPTVFLY 74
C +L ++ H ++ GL + ++ ++T+ + A +F I + +
Sbjct: 127 CANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSW 186
Query: 75 NTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAH 134
N+L+S + A ++ R+ +P+ + S+ AC G + G +
Sbjct: 187 NSLLSGYAKLGFARE-AVEVFGRLREESGFEPDEMSLVSVLGACGELGD-LELGRWVEGF 244
Query: 135 VLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXX 194
V++ + ++ ++L++ Y+K G L SR +FD + D TWN +
Sbjct: 245 VVE-RGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQN----- 298
Query: 195 XXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNL 254
++ EA+ LF M+ + PN+VTL A++SAC+++GAL G Y L
Sbjct: 299 -------GMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGL 351
Query: 255 KLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ + FV TAL+DMY+KCG L A ++F+ + ++ +NAMI
Sbjct: 352 QHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMI 393
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 135/288 (46%), Gaps = 33/288 (11%)
Query: 12 ILKLLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIP 67
++ +L C L L + V ++ G+ +++Y S L+++ SK + IF +P
Sbjct: 222 LVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMP 281
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
+ +N IS++ + + A SL++ + + PN T ++ AC G
Sbjct: 282 SRDFITWNAAISAY-AQNGMADEAISLFHS-MKENGVDPNKVTLTAVLSACASIGA-LDL 338
Query: 128 GPPLHAHVL-KFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXX 186
G + + + L+ +D FV +L++ YAK G L ++ +F+ + + A+WN ++
Sbjct: 339 GKQMDEYATHRGLQ--HDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISA- 395
Query: 187 XXXXXXXXXXXLEDADLSLEALYLFCDM--QMSRRRPNEVTLVALISACSNLGALSQGVW 244
L + EAL LF M + RPN++T V+L+SAC + G + +G
Sbjct: 396 -----------LASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGY- 443
Query: 245 THCYLLRNNL-----KLNRFVGTALVDMYSKCGCLNLACQLFDQLTDR 287
+ + + L K+ + + +VD+ S+ G L A + +++ ++
Sbjct: 444 -RLFDMMSTLFGLVPKIEHY--SCMVDLLSRAGHLYEAWDVIEKMPEK 488
>Medtr1g114220.1 | PPR containing plant-like protein | HC |
chr1:51543346-51541694 | 20130731
Length = 550
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 165/315 (52%), Gaps = 30/315 (9%)
Query: 8 FNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST----YALTIF 63
N +L LL KC S+ LK++HA ++ GL+ H Y + S L+++ Y+ +F
Sbjct: 13 INGTLLSLLDKCKSMLELKKLHAIGISYGLS-HEYSFIFKILSFSALSNSGDIDYSYRVF 71
Query: 64 SSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
S I +PT+F +N +I +++ + IH + S++ ++L H + P+ T+P L KA
Sbjct: 72 SQISSPTIFSWNIIIRGYSNSKNPIH-SLSIFLKMLRH-GVAPDYLTYPFLVKASARLSK 129
Query: 124 WFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
+ G +HA ++K D F+Q SL++ YA G + + +F+ + +L +WN++L
Sbjct: 130 Q-KSGVSVHAQIIKTGHES-DRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSML 187
Query: 184 XX----XXXXXXXXXXXXLEDADLS---------------LEALYLFCDMQMSRRRPNEV 224
+++ D+ EA+ +F M+ + NEV
Sbjct: 188 DGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEV 247
Query: 225 TLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
T+V+++SAC++LGAL +G H Y++ N L + + T+LVDMY+KCG + A +F +
Sbjct: 248 TMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGI 307
Query: 285 TDR--DTFCYNAMIG 297
+ D F +NAMIG
Sbjct: 308 SKSQTDVFIWNAMIG 322
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 20/229 (8%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F S+ V +++ I + + + A +++ ++ A + N T S+ AC
Sbjct: 199 AQKVFESMQERDVRSWSSFIDGYVK-AGEYREAMAVFEKMRAVGP-KANEVTMVSVLSAC 256
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQIS--EPDL 176
G Q G +H +++ L P +Q SL++ YAK G + + +F IS + D+
Sbjct: 257 AHLGA-LQKGRMMHQYIIDNL-LPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQTDV 314
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
WN ++ L L E+L LF +MQM+ R +E+T + L++AC++
Sbjct: 315 FIWNAMIGG------------LATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAH- 361
Query: 237 GALSQGVWTHCY-LLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
G L + W L++ + +VD+ ++ G L A Q Q+
Sbjct: 362 GGLVKEAWNFFESLVKRGMTPTSEHYACMVDVLARAGQLTTAYQFICQI 410
>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35446469-35444694 | 20130731
Length = 591
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 154/279 (55%), Gaps = 23/279 (8%)
Query: 22 LNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISS 80
+ L+Q HA ++ +G L+ LLT+SS S Y +F S+ +P FL+N+LI +
Sbjct: 31 IRPLQQAHAHLIVSGRHRSRALLTKLLTLSSAAGSIAYTRRLFLSVTDPDSFLFNSLIKA 90
Query: 81 FTSHSSQIHLAFSLYNRILA--HKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKF 138
+ H + F Y R+L+ HK P+S+TF S+FKAC + G LH+HV F
Sbjct: 91 SSQHGFSLDTIF-FYRRMLSSPHK---PSSYTFTSVFKACAHLSA-LKIGTILHSHV--F 143
Query: 139 LEP-PYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXX 197
+ + FVQA+++ FYAK LCV+R +FD++ + + WNT++
Sbjct: 144 VSGFGSNSFVQAAIVAFYAKSSALCVARKVFDKMPQRSVVAWNTMISG------------ 191
Query: 198 LEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLN 257
E L+ EA+ LF M P+ T V++ SACS +G+L G W + ++ N +++N
Sbjct: 192 YEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELGCWVYDSIVSNGIRVN 251
Query: 258 RFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+GT+L++M+S+CG + A +FD +++ + + AMI
Sbjct: 252 VILGTSLINMFSRCGDVRRARAVFDSISEGNVIAWTAMI 290
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 136/295 (46%), Gaps = 32/295 (10%)
Query: 15 LLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPT 70
+ + C L+ LK +H+ + +G +++ + ++ +K ++ A +F +P +
Sbjct: 122 VFKACAHLSALKIGTILHSHVFVSGFGSNSFVQAAIVAFYAKSSALCVARKVFDKMPQRS 181
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
V +NT+IS + H+ + A +L+ R + + P+S TF S+ AC G + G
Sbjct: 182 VVAWNTMISGY-EHNGLANEAMTLF-RKMNEMGVCPDSATFVSVSSACSQIGS-LELGCW 238
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
++ ++ + + SL+N +++ G + +R +FD ISE ++ W ++
Sbjct: 239 VYDSIVSN-GIRVNVILGTSLINMFSRCGDVRRARAVFDSISEGNVIAWTAMISGYGMH- 296
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRR-RPNEVTLVALISACSNLGALSQGVWTHC-- 247
+EA+ LF +M+ R PN VT VA++SAC++ G + +G
Sbjct: 297 -----------GYGVEAMELFYEMKKERGLVPNTVTFVAVLSACAHAGLIHEGRQVFASM 345
Query: 248 ---YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL--TDRDTFCYNAMIG 297
Y L L+ + +VDM K G L A Q +L + + AM+G
Sbjct: 346 REEYGLVPGLEHH----VCMVDMLGKAGLLTEAYQFIKELCPVEHVPAVWTAMLG 396
>Medtr7g032360.1 | PPR containing plant-like protein | HC |
chr7:11369613-11371524 | 20130731
Length = 541
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 162/317 (51%), Gaps = 38/317 (11%)
Query: 15 LLQKCHSLNTLKQVHAQMLTTGLALHT----YCLSHLL---TISSKLASTYALTIFSSIP 67
L+++C +L +K +H +L + + LHT Y + LL + S+ + YA +F I
Sbjct: 25 LIEQCKNLKEIKIIHTHILKSPI-LHTRDQYYLFTRLLYFCSFSNYASFNYANNVFHMIK 83
Query: 68 NPTVFLYNTLISSFT-----SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSG 122
P + +YN +I S+ S+ + A LY ++L +K + PN+ TFP L K C
Sbjct: 84 YPELRVYNIMIRSYGCIEGGDDSNCCYKALMLYKQML-NKGIVPNNLTFPFLVKGCSRLQ 142
Query: 123 HWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTL 182
+ G +HAHVLKF D FV SL++ + +G +R +FD++ D+ +WN++
Sbjct: 143 YGGTVGEVIHAHVLKF-GFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSM 201
Query: 183 LXXXXXXXXXXXX-------------------XXLEDADLSLEALYLFCDMQM----SRR 219
+ L A + E+L +F +MQ
Sbjct: 202 VVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVV 261
Query: 220 RPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQ 279
+P+++T+ +++SAC+ LG++ G W H YL +N+++ + +GTALV+MY KCG + A +
Sbjct: 262 KPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIE 321
Query: 280 LFDQLTDRDTFCYNAMI 296
+F+ + ++D + AMI
Sbjct: 322 IFNDMPEKDASAWTAMI 338
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 16/186 (8%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFT--SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFK 116
AL +F + + +N++I+ H+ + F + ++P+ T S+
Sbjct: 214 ALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLS 273
Query: 117 ACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDL 176
AC G +G +HA++ K + D + +L+N Y K G + + +F+ + E D
Sbjct: 274 ACALLGS-IDHGKWVHAYLRKN-DIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEKDA 331
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
+ W ++ +A F +M+ + +PN VT V L+SACS+
Sbjct: 332 SAWTAMISVFALH------------GFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHS 379
Query: 237 GALSQG 242
G + QG
Sbjct: 380 GLVEQG 385
>Medtr7g093900.1 | PPR containing plant-like protein | HC |
chr7:37365900-37360699 | 20130731
Length = 854
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 151/284 (53%), Gaps = 19/284 (6%)
Query: 16 LQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST---YALTIFSSIPNPTVF 72
++ C ++ LKQ+ A+M TG+ H + +S ++ + S YA TIF+ + P F
Sbjct: 1 MESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQPNTF 60
Query: 73 LYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLH 132
++NT+I + + I AFS + + + ++ +S +F KAC F+ G ++
Sbjct: 61 MWNTMIRGYQNARKPI-FAFSFFVYMFQLR-VEMDSRSFVFALKACQQFETVFE-GESVY 117
Query: 133 AHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXX 192
V K + + V+ L++FYA+ G L +R +FD+ S+ D+ TW T++
Sbjct: 118 CVVWK-MGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAH--- 173
Query: 193 XXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRN 252
D S EA+ +F M +S PNEVTL+A++SACS++G L G H +
Sbjct: 174 ---------DCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEK 224
Query: 253 NLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
N++ + + AL+DMY KC CL A +LFD++ +D + + +M+
Sbjct: 225 NMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMV 268
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 50/272 (18%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSH--SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFK 116
A +F + V + T+I + +H S + F L +L+H ++PN T ++
Sbjct: 148 ARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELM--LLSH--VEPNEVTLIAVVS 203
Query: 117 ACCGSGHWFQYGPPLHAHV--------LKFLEPPYDHFVQ-------------------- 148
AC G+ + G +H V L D +V+
Sbjct: 204 ACSDMGN-LEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVY 262
Query: 149 --ASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLE 206
S++N YAK G L +R FDQ + W+ ++ + E
Sbjct: 263 SWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQN------------NKPKE 310
Query: 207 ALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNL-KLNRFVGTALV 265
+L LF +M P E TLV+++SAC L L+ G W H Y + + L+ + A+V
Sbjct: 311 SLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIV 370
Query: 266 DMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
DMY+KCG ++ A ++F + +R+ +N MI
Sbjct: 371 DMYAKCGSIDAATEVFSTMPERNLISWNTMIA 402
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 120/277 (43%), Gaps = 21/277 (7%)
Query: 10 HPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPN 68
+ +L + KC L +++ +M T + Y + ++ +K A F P
Sbjct: 234 NALLDMYVKCDCLVDARELFDRMATKDV----YSWTSMVNGYAKCGDLESARRFFDQTPR 289
Query: 69 PTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYG 128
++ +I+ + S +++ + L++ ++ + + P T S+ AC G G
Sbjct: 290 KNAVCWSAMIAGY-SQNNKPKESLKLFHEMM-ERGVVPIEHTLVSVLSAC-GQLTCLNLG 346
Query: 129 PPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXX 188
+H + + P ++ ++++ YAK G + + +F + E +L +WNT++
Sbjct: 347 DWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAA 406
Query: 189 XXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCY 248
+ +A+ +F M+ PN +T V+L++ACS+ G +S+G
Sbjct: 407 NGR------------AKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDN 454
Query: 249 LLRN-NLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
+ R +K R +VD+ + G L A +L +
Sbjct: 455 MERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANM 491
>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2910760-2909010 | 20130731
Length = 519
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 157/335 (46%), Gaps = 62/335 (18%)
Query: 21 SLNTLKQVHAQMLTTGLALHTYCLSHL-LTISSKLA--------STYALTIFSSIPNPTV 71
+L TLKQ+HA M+ G + L L LTIS+ L + YA +F+ IP P
Sbjct: 14 NLKTLKQIHALMIINGFNNNVNFLGDLVLTISTSLVGPTATPTVTNYAHQLFAQIPQPDT 73
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPL 131
F+YN +I +S S A SLY + H ++ +S+TFP + KAC W G +
Sbjct: 74 FMYNVMIRG-SSQSPNPLRAISLYTEMHRH-FVKGDSYTFPFVLKACT-RLFWVNTGSAV 130
Query: 132 HAHVLK-----------------------------FLEP-PYDHFVQASLLNFYAKYGRL 161
H VL+ F + D +SL+ YA+ G L
Sbjct: 131 HGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDL 190
Query: 162 CVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDA-------------------D 202
V+R LF+++ E DL +WN ++ L D
Sbjct: 191 KVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCG 250
Query: 203 LSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNL-KLNRFVG 261
LS +AL LF +M + P+EVTL++L+SAC++LG L G H ++ ++ KL+ +G
Sbjct: 251 LSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLG 310
Query: 262 TALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
AL+DMY+KCG + + +F +TD+D +N++I
Sbjct: 311 NALIDMYAKCGNIKESLDVFWSITDKDVISWNSVI 345
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 24/231 (10%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFT--SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFK 116
A +F P V +N +I+ + S Q A L+N + + P+ T SL
Sbjct: 224 ARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQ---ALELFNE-MCRAGVFPDEVTLLSLLS 279
Query: 117 ACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDL 176
AC G + G +HA V++ + +L++ YAK G + S +F I++ D+
Sbjct: 280 ACADLGD-LENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDV 338
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
+WN+++ E+L LF MQ ++ PNE+T V ++ ACS+
Sbjct: 339 ISWNSVIVGMALHGHGK------------ESLSLFKMMQRTKICPNEITFVGVLVACSHA 386
Query: 237 GALSQGVWTHCYLLRNNLKLN---RFVGTALVDMYSKCGCLNLACQLFDQL 284
G + +G + + L+ + K+ R G +VDM + G L A + D +
Sbjct: 387 GEIDEG-YKYFDLMSSEYKIEPNIRHCG-CMVDMLGRAGLLKEAAKFIDSM 435
>Medtr8g074780.1 | PPR containing plant-like protein | HC |
chr8:31617312-31615266 | 20130731
Length = 510
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 143/287 (49%), Gaps = 23/287 (8%)
Query: 16 LQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST---YALTIFSSIPNPTVF 72
L C +++ +KQ HAQ++ G + + L+ S+L T +A +F + VF
Sbjct: 27 LHHCKTIDRIKQTHAQIIIGGHKQDPFIAAKLIDKYSQLGGTNVEHARKVFDDLSERDVF 86
Query: 73 LYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLH 132
+N +I + ++ A +YN + PN +T+P + KAC + G +H
Sbjct: 87 CWNNVIKGY-ANMGPFAEALHVYNAMRLSGA-APNRYTYPFVLKACGAERDCLK-GRIIH 143
Query: 133 AHVLK-FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXX 191
+V+K LE +D FV + + FYAK + SR +FD++ E D+ +WN+++
Sbjct: 144 GNVVKCGLE--FDLFVGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYIANGY 201
Query: 192 XXXXXXLEDADLSLEALYLFCDMQMSRRR--PNEVTLVALISACSNLGALSQGVWTHCYL 249
EA+ LFCDM P+ TLV ++ A + + G W HCY+
Sbjct: 202 VD------------EAVMLFCDMLRDDGIGFPDNATLVTVLPAFAEKADIHAGYWIHCYI 249
Query: 250 LRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
++ +KL+ VG L+ +YS CG + +A +FDQ+ DR+ ++A+I
Sbjct: 250 VKTGMKLDPAVGCGLITLYSNCGYIRMAKAVFDQIPDRNVIVWSAII 296
>Medtr8g096030.1 | PPR containing plant-like protein | HC |
chr8:40057307-40055314 | 20130731
Length = 494
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 161/332 (48%), Gaps = 63/332 (18%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALH-------------TYCL---SHLLTISSKLA 55
+L L+++C S+ L Q+HA +T+ L H T L +++ T S+
Sbjct: 3 MLNLIKQCKSIKQLHQIHALTITSNLLPHHPLSILNILLSTFTSLLNSKNNIKTYSNSFL 62
Query: 56 STYALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLF 115
+TYAL++F+SIPNPT F +NTLI T SS + A ++ L L + TFP +
Sbjct: 63 TTYALSLFNSIPNPTTFTFNTLIRIHTLLSSPLS-ALKIFLS-LRRLFLTLDFHTFPLIL 120
Query: 116 KACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYA------------------- 156
KA H LH+ V K+ D FV SL+ Y+
Sbjct: 121 KASS-QLHSLSLAQSLHSQVFKY-GFLVDSFVMNSLIRVYSVNDRVNDAYKVFCESGYRD 178
Query: 157 ------------KYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
K +L +R LFD++ + + TW T++ A L
Sbjct: 179 IVSYNVMIDGFVKNFKLDRARELFDEMPQRNEVTWGTMIAGY------------SQAKLC 226
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTAL 264
EA+ LF +M P+ + LV+++SAC+ LG L QG + H Y+ RN ++++ ++ T L
Sbjct: 227 REAVELFNEMIGLEFIPDNIALVSVLSACAQLGELEQGRFVHDYITRNGIRVDSYLTTGL 286
Query: 265 VDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
VD+Y+KCGC+ +A + F+ T++D F +NAM+
Sbjct: 287 VDLYAKCGCVEIARETFESCTNKDVFTWNAML 318
>Medtr4g113830.1 | organelle transcript processing protein, putative
| HC | chr4:46849211-46846995 | 20130731
Length = 738
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 156/313 (49%), Gaps = 29/313 (9%)
Query: 10 HPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLS---HLLTISSKLASTYALTIFSSI 66
HP L LL+KC ++NT KQ+H+ ++ TGL + S H +S +YAL++F
Sbjct: 29 HPYLNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEEN 88
Query: 67 P---NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
VF++N+LI ++ SS + L++R+L + +QPNS TFP LFK+C +
Sbjct: 89 QQHHKHNVFIWNSLIRGYSL-SSSPLSSLHLFSRMLYY-GVQPNSHTFPFLFKSCTKAKA 146
Query: 124 WFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
+ G LHAH LK L ++ V S+++ YA G + +R +FD+ S D ++ L+
Sbjct: 147 THE-GKQLHAHALK-LALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALI 204
Query: 184 XXXXXXXXXXXXXXLED-------------------ADLSLEALYLFCDMQMSRRRPNEV 224
L D + EA+ F +MQ + PN+
Sbjct: 205 TGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKS 264
Query: 225 TLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
T+V ++SAC + + G W ++ N N + AL+DMY KCG ++A +LFD +
Sbjct: 265 TMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGI 324
Query: 285 TDRDTFCYNAMIG 297
++D +N MIG
Sbjct: 325 EEKDVISWNTMIG 337
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 115/241 (47%), Gaps = 21/241 (8%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F IP V +N +IS + S + A + + L PN T + AC
Sbjct: 216 ARRLFDEIPVKDVVSWNAMISGYV-QSGRFEEAIVCFYEMQEANVL-PNKSTMVVVLSAC 273
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQ--ASLLNFYAKYGRLCVSRCLFDQISEPDL 176
G + G + + V + + +Q +L++ Y K G ++R LFD I E D+
Sbjct: 274 -GHTRSGELGKWIGSWVR---DNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDV 329
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
+WNT++ L EAL LF M S +PN+VT + ++ AC+ L
Sbjct: 330 ISWNTMIGGYSYLS------------LYEEALALFEVMLRSNVKPNDVTFLGILHACACL 377
Query: 237 GALSQGVWTHCYLLRN-NLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAM 295
GAL G W H Y+ +N N + T+L+DMY+KCGC+ A ++F + R+ +NAM
Sbjct: 378 GALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAM 437
Query: 296 I 296
+
Sbjct: 438 L 438
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 16/185 (8%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F I V +NT+I + S+ S A +L+ ++ ++PN TF + AC
Sbjct: 317 ARELFDGIEEKDVISWNTMIGGY-SYLSLYEEALALF-EVMLRSNVKPNDVTFLGILHAC 374
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
G G +HA++ K L + + SL++ YAK G + + +F + +LA+
Sbjct: 375 ACLGA-LDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLAS 433
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACSNLG 237
WN +L + AL LF +M RP+++T V ++SAC+ G
Sbjct: 434 WNAMLSGFAMHGH------------AERALALFSEMVNKGLFRPDDITFVGVLSACTQAG 481
Query: 238 ALSQG 242
+ G
Sbjct: 482 LVDLG 486
>Medtr3g111500.1 | PPR containing plant-like protein | HC |
chr3:52097450-52094882 | 20130731
Length = 524
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 166/319 (52%), Gaps = 36/319 (11%)
Query: 7 IFNHPILKLLQKCHSL--NTLKQVHAQMLTTGLALHTYCLSHLLTI---SSKLASTYALT 61
I N P L LLQ+ +L KQ+HA + L +Y S +L S + YA T
Sbjct: 4 IRNSPCLHLLQQWQNLTMKQTKQIHAHAIANNLTRFSYISSRILAFFAASPRGDFRYAET 63
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS 121
+F+ +PNP +F YN++I+S+T++ SQ + S++ ++L + ++PNS TF +L K+C
Sbjct: 64 LFTHMPNPNIFDYNSIITSYTTN-SQFDKSLSVFTKML-NMNIRPNSHTFTTLVKSCVTL 121
Query: 122 GHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
Q + +K +FV +S++N ++K+G + ++R +FD+ S ++ W +
Sbjct: 122 SSLEQ----VFTLTMKSGNSSDVYFV-SSVINVFSKHGAIHLARQVFDESSNRNVVCWTS 176
Query: 182 L--------LXXXXXXXXXXXXXXLEDADLSL-----------EALYLFCDMQ-----MS 217
L L E ++ ++ E + LF +++ +
Sbjct: 177 LVSGYCSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRA 236
Query: 218 RRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLA 277
R + N LV++++AC+ +GA +G W H Y+ N L+ + +GTAL+D Y+KCG + A
Sbjct: 237 RVKFNGALLVSVLNACTVMGAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDA 296
Query: 278 CQLFDQLTDRDTFCYNAMI 296
++FD++ +D ++AMI
Sbjct: 297 EKVFDKMLVKDVATWSAMI 315
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 109/261 (41%), Gaps = 51/261 (19%)
Query: 10 HPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPN 68
H L++ C +L++L+QV + +G + Y +S ++ + SK + + A +F N
Sbjct: 109 HTFTTLVKSCVTLSSLEQVFTLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSN 168
Query: 69 PTVFLYNTLISSFTS----------------------------------HSSQIHLAFSL 94
V + +L+S + S S + L L
Sbjct: 169 RNVVCWTSLVSGYCSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFREL 228
Query: 95 YNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLK-FLEPPYDHFVQASLLN 153
+ ++ N S+ AC G F+ G +H++V + LE YD + +L++
Sbjct: 229 KKKDKGRARVKFNGALLVSVLNACTVMGA-FEEGKWIHSYVEENGLE--YDLELGTALID 285
Query: 154 FYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCD 213
FYAK G + + +FD++ D+ATW+ ++ AL LF
Sbjct: 286 FYAKCGWVKDAEKVFDKMLVKDVATWSAMILGLAINGNNKM------------ALELFEK 333
Query: 214 MQMSRRRPNEVTLVALISACS 234
M+ +PNEVT V +++AC+
Sbjct: 334 MEKVGPKPNEVTFVGVLTACN 354
>Medtr7g033400.1 | PPR containing protein | HC |
chr7:12012362-12010888 | 20130731
Length = 486
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 149/300 (49%), Gaps = 24/300 (8%)
Query: 1 MKAQNPIFNHPILKLL-QKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLT---ISSKLAS 56
++ QNP P L +L K ++ LKQ+HAQM+ T + S L + +S
Sbjct: 34 LQNQNP----PTLAILADKSTTIQHLKQIHAQMIITSRINDQFATSRLFSSFALSPFGNL 89
Query: 57 TYALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFK 116
+A IFSS+ P F++NTLI + Q H++ SLY ++ H + P TFP L K
Sbjct: 90 EHASRIFSSLHKPNSFMWNTLIRAH--QQQQPHISLSLYIQMRRHGVI-PGKHTFPFLLK 146
Query: 117 ACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDL 176
AC + + +HAHV+KF +D V L+ Y+ G L +R +FD+I +L
Sbjct: 147 ACSSLSNVLPHCKQVHAHVVKF-GLCFDCHVGNGLVRGYSVSGDLVDARYVFDEIPMKNL 205
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
+ W T++ EAL LF M + PN TL +++S C+
Sbjct: 206 SLWTTMICGYAQNCCYN------------EALDLFERMVVVGFEPNGATLASVLSVCARS 253
Query: 237 GALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G L G H ++ +++ +GTALV MY+K G + A +LFD++ +R+ +NAMI
Sbjct: 254 GCLELGERIHEFMRVKGVEVGVILGTALVYMYAKNGDILTARKLFDEMPERNVVTWNAMI 313
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 109/243 (44%), Gaps = 26/243 (10%)
Query: 15 LLQKCHSLNTL----KQVHAQMLTTGLALHTYCLSHLL---TISSKLASTYALTIFSSIP 67
LL+ C SL+ + KQVHA ++ GL + + L+ ++S L A +F IP
Sbjct: 144 LLKACSSLSNVLPHCKQVHAHVVKFGLCFDCHVGNGLVRGYSVSGDLVD--ARYVFDEIP 201
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
+ L+ T+I + + + A L+ R++ +PN T S+ C SG +
Sbjct: 202 MKNLSLWTTMICGYAQNCC-YNEALDLFERMVV-VGFEPNGATLASVLSVCARSG-CLEL 258
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G +H ++ + +L+ YAK G + +R LFD++ E ++ TWN ++
Sbjct: 259 GERIH-EFMRVKGVEVGVILGTALVYMYAKNGDILTARKLFDEMPERNVVTWNAMICGLA 317
Query: 188 XXXXXXXXXXLEDADLSLEALYLF-CDMQMSRRRPNEVTLVALISACSNLGALSQGVWTH 246
+EDA L LF C + PN VT V ++SAC + G + G
Sbjct: 318 SHGH------VEDA------LGLFECMKEEEIVVPNAVTFVGVLSACCHAGLIDVGREVF 365
Query: 247 CYL 249
C +
Sbjct: 366 CSM 368
>Medtr1g012380.1 | PPR containing plant-like protein | HC |
chr1:2444546-2447496 | 20130731
Length = 600
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 150/298 (50%), Gaps = 27/298 (9%)
Query: 12 ILKLLQK-CHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIF------- 63
IL LL C++L+ L Q+HA +L TGL + L+ + SS L S + T F
Sbjct: 20 ILTLLNSHCNTLSKLTQIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPPSHT 79
Query: 64 SSIPNPT--VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS 121
+S P P+ FL+NTLI +++ +F Y +L + + PN FTFP + K C G
Sbjct: 80 TSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRY-GVTPNKFTFPFVLKGCAGI 138
Query: 122 GHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGR--LCVSRCLFDQISEPDLATW 179
G + G +H V+KF D V +L++ Y G + +FD + D TW
Sbjct: 139 GS-LRLGKCVHGCVVKF-GFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTW 196
Query: 180 NTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGAL 239
+ ++ S A+ LF +MQ+ P+E+T+V+++SAC++LGAL
Sbjct: 197 SAMIAGFVRL------------GCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGAL 244
Query: 240 SQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
G W Y+ + N+ + + AL+DM++KCG ++ A +LF Q+ R + ++I
Sbjct: 245 ELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIA 302
>Medtr7g084830.1 | PPR containing plant-like protein | HC |
chr7:32742835-32744848 | 20130731
Length = 476
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 147/315 (46%), Gaps = 49/315 (15%)
Query: 15 LLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFL 73
LQ C++ LKQ+HA+++ L + L ISS YA +F + +P +F
Sbjct: 26 FLQNCNNFKQLKQIHARIIRFRLTHDQLLIRKLCQISSSYGKIDYASLVFDQLNDPDIFT 85
Query: 74 YNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHA 133
+N +I ++ + S + L+ ++ L P+ FT+P + AC SG +G H
Sbjct: 86 WNVMIRAYNT-SGLPQKSIFLFKDMICCGFL-PDKFTYPFVINACIASGV-IDFGRLTHG 142
Query: 134 HVLKFLEPPYDHFVQASLLNFYAKYG--------------------------------RL 161
+K + D +VQ +++N Y K G +L
Sbjct: 143 LAIK-MGFWSDVYVQNNMMNLYFKIGGDVDDGWKVFDKMRVRNVVSWTTVIAGLVACGKL 201
Query: 162 CVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRP 221
+R +F++I ++ +W ++ D ++A LF M + RP
Sbjct: 202 DTAREVFERIPSKNVVSWTAMINGYVKN------------DNPIKAFDLFERMLIDNVRP 249
Query: 222 NEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLF 281
NE TLV+LI AC++LG+L G H + L+N +L F+GTALVDMYSKCG L+ A ++F
Sbjct: 250 NEFTLVSLIKACTDLGSLKLGRRMHDFALKNGFELGPFLGTALVDMYSKCGSLDAAVKVF 309
Query: 282 DQLTDRDTFCYNAMI 296
+ R+ +N M+
Sbjct: 310 GLMEVRNLATWNTML 324
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 23/231 (9%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F IP+ V + +I+ + + + I AF L+ R+L ++PN FT SL KAC
Sbjct: 204 AREVFERIPSKNVVSWTAMINGYVKNDNPIK-AFDLFERMLI-DNVRPNEFTLVSLIKAC 261
Query: 119 CGSGHWFQYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDL 176
G + G +H LK F P F+ +L++ Y+K G L + +F + +L
Sbjct: 262 TDLGS-LKLGRRMHDFALKNGFELGP---FLGTALVDMYSKCGSLDAAVKVFGLMEVRNL 317
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
ATWNT+L E L LF +M+ + P+ +T V ++SAC +
Sbjct: 318 ATWNTMLTSFGVH------------GFGNEVLDLFKEMEKAGVVPDAITFVGVLSACVQI 365
Query: 237 GALSQGVWTHCYLLRNNLKLNRFVG--TALVDMYSKCGCLNLACQLFDQLT 285
L G + L+ + L + T +V +Y++ LN L D ++
Sbjct: 366 NDLELG-QKYFSLMTEHYSLTPILEHYTCMVGLYTRANELNEIRTLGDTMS 415
>Medtr2g101710.1 | PPR containing plant protein | HC |
chr2:43758970-43756533 | 20130731
Length = 620
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 150/297 (50%), Gaps = 24/297 (8%)
Query: 6 PIFNHPILKLLQKC---HSLNTLKQVHAQMLTTGLALH---TYCLSHLLTISSKLASTYA 59
P ++ LLQ C +LN KQ+HAQ G+A + L HL +S+ L + A
Sbjct: 44 PTTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLN--A 101
Query: 60 LTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACC 119
+F IP +FL+N LI + + + A LY+++L + L+P++FT P + KAC
Sbjct: 102 RNLFDKIPKQNLFLWNVLIRGYAWNGPHDN-AIILYHKMLDY-GLRPDNFTLPFVLKACS 159
Query: 120 GSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATW 179
G +H +V+K D FV A+L++ YAK G + + +FD+I D W
Sbjct: 160 ALSA-IGEGRSIHEYVIKS-GWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLW 217
Query: 180 NTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGAL 239
N++L E++ L +M + RP E TLV +IS+ +++ L
Sbjct: 218 NSMLAAYAQNGHPD------------ESISLCREMAANGVRPTEATLVTVISSSADVACL 265
Query: 240 SQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G H + R+ + N V TAL+DMY+KCG + +A LF++L ++ +NA+I
Sbjct: 266 PYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAII 322
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 26/227 (11%)
Query: 82 TSHSSQIHLAF----SLYNRILAHKTLQPNSF--------TFPSLFKACCGSGHWFQYGP 129
T H+S I F S Y+ + H+T +SF + SL ++C S G
Sbjct: 9 TQHTSFIFNLFPFSQSFYHSLATHQTASVDSFPPQPTTHYGYTSLLQSCIDSKA-LNPGK 67
Query: 130 PLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXX 189
LHA L Y+ + L++ YA L +R LFD+I + +L WN L+
Sbjct: 68 QLHAQ-FYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWN 126
Query: 190 XXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYL 249
A+ L+ M RP+ TL ++ ACS L A+ +G H Y+
Sbjct: 127 GPHD------------NAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYV 174
Query: 250 LRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+++ + + FVG AL+DMY+KCGC+ A ++FD++ RD +N+M+
Sbjct: 175 IKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSML 221
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 130/288 (45%), Gaps = 23/288 (7%)
Query: 15 LLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
+L+ C +L+ + + +H ++ +G + + L+ + +K A +F I
Sbjct: 154 VLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRD 213
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
L+N++++++ + + + SL R +A ++P T ++ + YG
Sbjct: 214 AVLWNSMLAAY-AQNGHPDESISLC-REMAANGVRPTEATLVTVISSSADVA-CLPYGRE 270
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+H + D V+ +L++ YAK G + V+ LF+++ E + +WN ++
Sbjct: 271 IHGFGWRHGFQSNDK-VKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMH- 328
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
L++ AL LF D RP+ +T V +++ACS L +G + ++
Sbjct: 329 -----------GLAVGALDLF-DKMRKEDRPDHITFVGVLAACSRGRLLDEGRALYNLMV 376
Query: 251 RN-NLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDR-DTFCYNAMI 296
R+ + T ++D+ CG L+ A L ++ + D+ + A++
Sbjct: 377 RDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALL 424
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 146/289 (50%), Gaps = 19/289 (6%)
Query: 11 PILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLT--ISSKLASTYALTIFSSIPN 68
P+L+ SL K +H +++T GL Y +L++ +S L YA +F I N
Sbjct: 8 PLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFD-YAKNVFDVIEN 66
Query: 69 P-TVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
P + L N L++ +T + A L+++++ + L+P+S+T+PS+ KAC G
Sbjct: 67 PFEISLCNGLMAGYT-RNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKAC-GGLRRVVL 124
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G +H ++K D V +SL+ YAK + LFD++ + D+A WNT++
Sbjct: 125 GQMIHTCLVK-EGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYY 183
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
EAL F M+ P+ VT+ IS+C+ L L +G H
Sbjct: 184 QSGKFE------------EALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHK 231
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L+ + +++ FV ALVDMY KCG L +A ++F+Q+ ++ +N+MI
Sbjct: 232 ELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMI 280
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 21 SLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLIS 79
L+ +++H +++ +G + ++ + L+ + K A+ +F +PN TV +N++I+
Sbjct: 222 DLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMIN 281
Query: 80 SFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFL 139
+ I L+ R+ + + ++P T S AC S + G +H ++++
Sbjct: 282 GYGFKGDGIS-CIQLFKRMYS-EGVKPTLTTLTSTLMACSQSAQLLE-GKFVHGYIIRNR 338
Query: 140 EPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLE 199
P D F+ +SL++ Y K G++ + +F + + +WN ++
Sbjct: 339 IQP-DIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKL------- 390
Query: 200 DADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRF 259
+AL LF +M S P+ +T ++++ACS L AL +G H ++ NL N
Sbjct: 391 -----FDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEV 445
Query: 260 VGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
V AL+DMY+KCG + A +F L +RD + +MI
Sbjct: 446 VMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMI 482
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 17/220 (7%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSH 84
K VH ++ + + S L+ + K A TIF +P T +N +IS + +
Sbjct: 328 KFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTE 387
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
++ A L+ ++ ++P++ TF S+ AC + G +H +++ +
Sbjct: 388 G-KLFDALRLFGE-MSKSFVEPDAITFTSVLAACSQLAA-LEKGREIHNLIVE-RNLGNN 443
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
V +LL+ YAK G + + +F + E DL +W +++
Sbjct: 444 EVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVY----------- 492
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVW 244
EAL LF +M S +P+ VT +A++SACS+ G + G++
Sbjct: 493 -EALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLY 531
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 146/289 (50%), Gaps = 19/289 (6%)
Query: 11 PILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLT--ISSKLASTYALTIFSSIPN 68
P+L+ SL K +H +++T GL Y +L++ +S L YA +F I N
Sbjct: 8 PLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFD-YAKNVFDVIEN 66
Query: 69 P-TVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
P + L N L++ +T + A L+++++ + L+P+S+T+PS+ KAC G
Sbjct: 67 PFEISLCNGLMAGYT-RNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKAC-GGLRRVVL 124
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G +H ++K D V +SL+ YAK + LFD++ + D+A WNT++
Sbjct: 125 GQMIHTCLVK-EGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYY 183
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
EAL F M+ P+ VT+ IS+C+ L L +G H
Sbjct: 184 QSGKFE------------EALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHK 231
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L+ + +++ FV ALVDMY KCG L +A ++F+Q+ ++ +N+MI
Sbjct: 232 ELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMI 280
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 135/277 (48%), Gaps = 17/277 (6%)
Query: 21 SLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLIS 79
L+ +++H +++ +G + ++ + L+ + K A+ +F +PN TV +N++I+
Sbjct: 222 DLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMIN 281
Query: 80 SFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFL 139
+ I L+ R+ + + ++P T S AC S + G +H ++++
Sbjct: 282 GYGFKGDGIS-CIQLFKRMYS-EGVKPTLTTLTSTLMACSQSAQLLE-GKFVHGYIIRNR 338
Query: 140 EPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLE 199
P D F+ +SL++ Y K G++ + +F + + +WN ++
Sbjct: 339 IQP-DIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKL------- 390
Query: 200 DADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRF 259
+AL LF +M S P+ +T ++++ACS L AL +G H ++ NL N
Sbjct: 391 -----FDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEV 445
Query: 260 VGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
V AL+DMY+KCG + A +F L +RD + +MI
Sbjct: 446 VMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMI 482
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 17/220 (7%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSH 84
K VH ++ + + S L+ + K A TIF +P T +N +IS + +
Sbjct: 328 KFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTE 387
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
++ A L+ ++ ++P++ TF S+ AC + G +H +++ +
Sbjct: 388 G-KLFDALRLFGE-MSKSFVEPDAITFTSVLAACSQLAA-LEKGREIHNLIVE-RNLGNN 443
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
V +LL+ YAK G + + +F + E DL +W +++
Sbjct: 444 EVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVY----------- 492
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVW 244
EAL LF +M S +P+ VT +A++SACS+ G + G++
Sbjct: 493 -EALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLY 531
>Medtr5g044260.1 | PPR containing plant-like protein | HC |
chr5:19452918-19451090 | 20130731
Length = 565
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 146/288 (50%), Gaps = 51/288 (17%)
Query: 15 LLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFSSIPNPTVFLY 74
LL + +S++ +KQ+HAQ+L T +HT P F +
Sbjct: 20 LLNQSNSISHVKQIHAQILRT---IHT---------------------------PNSFTW 49
Query: 75 NTLISSFTSHSSQIHLAFSLYNRILAHK--TLQPNSFTFPSLFKACCGSGHWFQYGPPLH 132
N LI S++ + A LY I+ + L P+ T+P + KAC F+ G +H
Sbjct: 50 NILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKACAYLFSLFE-GKQVH 108
Query: 133 AHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISE-PDLATWNTLLXXXXXXXX 191
AHVLK L D ++ SL++FYA G L +R +FD++ E ++ +WN ++
Sbjct: 109 AHVLK-LGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSWNVMI-------- 159
Query: 192 XXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLR 251
+ D D+ L +FC+M M P+ T+ ++I AC LG+LS G+W H ++L+
Sbjct: 160 -DSYAKVGDYDI---VLIMFCEM-MKVYEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLK 214
Query: 252 ---NNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
N+ + V T LVDMY KCG L +A Q+F+ ++ RD +N++I
Sbjct: 215 KCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSII 262
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 129/278 (46%), Gaps = 20/278 (7%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPN-P 69
+LK SL KQVHA +L G L TY + L+ + A +F +
Sbjct: 91 VLKACAYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWR 150
Query: 70 TVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGP 129
V +N +I S+ + + ++ ++ K +P+ +T S+ +AC G G G
Sbjct: 151 NVVSWNVMIDSY-AKVGDYDIVLIMFCEMM--KVYEPDCYTMQSVIRACGGLGS-LSLGM 206
Query: 130 PLHAHVLKFLEPPY--DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
+HA VLK + D V L++ Y K G L +++ +F+ +S D+++WN+++
Sbjct: 207 WVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFA 266
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
A +L+ Y +++ + PN +T V ++SAC++ G + +G+
Sbjct: 267 VHG---------KAKAALD--YFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFE 315
Query: 248 YLLRN-NLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
+ + N++ + LVD+Y++ G + A + ++
Sbjct: 316 MMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEM 353
>Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0493:2001-4149 | 20130731
Length = 611
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 144/304 (47%), Gaps = 37/304 (12%)
Query: 12 ILKLLQKCHS-LNTLKQVHAQMLTTGLALHTYCLSHLL-----TISSKLASTYALTIFSS 65
+L LL C++ L T KQ+H + TGL H + LL +IS + + Y+L +F
Sbjct: 12 LLSLLSNCNTTLKTTKQIHTHLYVTGLHTHPFFFGKLLLNCAVSISDHVLN-YSLRLFHH 70
Query: 66 IPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWF 125
PNP F+YNTLI S SHSS + + ++L H TL P+SF+F K G
Sbjct: 71 FPNPDTFMYNTLIRSL-SHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDGCSK 129
Query: 126 QYGPPLHAHVLKFLEPPYDH-FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLX 184
+ G LH+H F DH FV +L++ YA+ G +R +FD++S+P++ WN ++
Sbjct: 130 RQGIQLHSHA--FRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVT 187
Query: 185 X--------------XXXXXXXXXXXXLEDADLSL------------EALYLFCDMQMSR 218
+DA S +A F ++ R
Sbjct: 188 ACFRCGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDR 247
Query: 219 RRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLAC 278
RP+EV+L ++SAC+ GA G H ++ + V AL+D YSKCG +++A
Sbjct: 248 NRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAK 307
Query: 279 QLFD 282
+F+
Sbjct: 308 LVFN 311
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 221 PNEVTLVALISACSNLG-ALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQ 279
P+ + + +N G + QG+ H + R+ + FVGT L+ MY++CGC A +
Sbjct: 110 PDSFSFAFTLKGIANDGCSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARK 169
Query: 280 LFDQLTDRDTFCYNAMI 296
+FD+++ + +NA++
Sbjct: 170 VFDEMSQPNVVAWNAVV 186
>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:39629093-39627012 | 20130731
Length = 626
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 147/317 (46%), Gaps = 54/317 (17%)
Query: 15 LLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFL 73
L+ K S L Q+HA ++ L HT L S L Y++T+F+ N V+
Sbjct: 30 LIDKSKSKTHLLQIHASLVRRNLDDHTILNFKLQRRYSSLGHLNYSVTLFNRTRNRDVYT 89
Query: 74 YNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHA 133
+ ++I + T S A S Y ++L H+ +QPN+FTF SL +G Q +H
Sbjct: 90 WTSIIHAHT-QSKLNDQALSYYAQMLTHR-IQPNAFTFSSLL-----NGSTIQPIKSIHC 142
Query: 134 HVLKF------------------------LEPPYDHFVQASLLNF------YAKYGRLCV 163
HV+KF E +D + SL++F YAK+G+L
Sbjct: 143 HVIKFGLCSDTYVATGLVDGYARGGDFISAEKLFDKMPEKSLISFTTMLMCYAKHGKLLE 202
Query: 164 SRCLFDQI-SEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPN 222
+R LFD + D+ WN ++ E L LF M + + +PN
Sbjct: 203 ARLLFDGMEGNRDVVVWNVMIDGYAQN------------GFPNECLLLFRRMLVEKVKPN 250
Query: 223 EVTLVALISACSNLGALSQGVWTHCYLLRNN---LKLNRFVGTALVDMYSKCGCLNLACQ 279
+TL+ ++S+C +GAL G W H Y+ + + VGTALVDMY KCG L A +
Sbjct: 251 VITLLPVLSSCGQVGALESGRWVHSYIKNGKDGVVGVEVRVGTALVDMYCKCGSLEDARK 310
Query: 280 LFDQLTDRDTFCYNAMI 296
+FD++ +D +N+MI
Sbjct: 311 VFDKIDGKDVVAWNSMI 327
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 130/313 (41%), Gaps = 52/313 (16%)
Query: 21 SLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLIS 79
++ +K +H ++ GL TY + L+ ++ A +F +P ++ + T++
Sbjct: 133 TIQPIKSIHCHVIKFGLCSDTYVATGLVDGYARGGDFISAEKLFDKMPEKSLISFTTMLM 192
Query: 80 SFTSHSS--QIHLAFS-----------------------------LYNRILAHKTLQPNS 108
+ H + L F L+ R+L K ++PN
Sbjct: 193 CYAKHGKLLEARLLFDGMEGNRDVVVWNVMIDGYAQNGFPNECLLLFRRMLVEK-VKPNV 251
Query: 109 FTFPSLFKACCGSGHWFQYGPPLHAHVL--KFLEPPYDHFVQASLLNFYAKYGRLCVSRC 166
T + +C G + G +H+++ K + V +L++ Y K G L +R
Sbjct: 252 ITLLPVLSSCGQVGA-LESGRWVHSYIKNGKDGVVGVEVRVGTALVDMYCKCGSLEDARK 310
Query: 167 LFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTL 226
+FD+I D+ WN+++ LS EAL LF +M RP+ VT
Sbjct: 311 VFDKIDGKDVVAWNSMIMGYAVN------------GLSEEALKLFHEMHGEGVRPSYVTF 358
Query: 227 VALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG--TALVDMYSKCGCLNLACQLFDQL 284
+AL++AC + G +++G W L++N K+ V +V++ + G L A L +
Sbjct: 359 IALLTACGHSGLVTKG-WEMFNLMKNEYKMEPRVEHFGCMVNLLGRAGRLQEAYDLVRSM 417
Query: 285 T-DRDTFCYNAMI 296
D D + ++
Sbjct: 418 KIDPDPVIWGTLL 430
>Medtr3g080230.1 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 143/319 (44%), Gaps = 48/319 (15%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLL---TISSKLASTYALTIFSSIPN 68
++ + +KC S+ K +HA T L H L L +S +YA +F +P
Sbjct: 10 LVYMAEKCISMRNFKLIHAHAFRTCLHQHAVVLGKLFRFAAVSPFGDLSYAHNMFDQMPQ 69
Query: 69 PTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS------- 121
PT F YNTLI + SHS+ + +NR + ++ P+ F+F L K+ +
Sbjct: 70 PTTFFYNTLIRAH-SHSTTPSFSSLFFNR-MRRNSIAPDEFSFTFLLKSRSFTMPLVHDI 127
Query: 122 -GHWFQYGPPLHAHVLKFLEPPY-----------------------DHFVQASLLNFYAK 157
G F++G H HV L Y D + LL +AK
Sbjct: 128 HGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAK 187
Query: 158 YGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMS 217
G L V+R +FD + E D+ +W +L A E L LF +M+++
Sbjct: 188 AGELDVARKVFDGMPERDVVSWTIMLSAY------------SKAKRPHETLDLFQEMRLA 235
Query: 218 RRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLA 277
P+EVT++++ISAC+ LG G H ++ N + +L+DMY KCGCL A
Sbjct: 236 GVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEA 295
Query: 278 CQLFDQLTDRDTFCYNAMI 296
Q+FD+ + +NAM+
Sbjct: 296 WQVFDRTKRKSLITWNAMM 314
>Medtr3g080230.2 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 143/319 (44%), Gaps = 48/319 (15%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLL---TISSKLASTYALTIFSSIPN 68
++ + +KC S+ K +HA T L H L L +S +YA +F +P
Sbjct: 10 LVYMAEKCISMRNFKLIHAHAFRTCLHQHAVVLGKLFRFAAVSPFGDLSYAHNMFDQMPQ 69
Query: 69 PTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS------- 121
PT F YNTLI + SHS+ + +NR + ++ P+ F+F L K+ +
Sbjct: 70 PTTFFYNTLIRAH-SHSTTPSFSSLFFNR-MRRNSIAPDEFSFTFLLKSRSFTMPLVHDI 127
Query: 122 -GHWFQYGPPLHAHVLKFLEPPY-----------------------DHFVQASLLNFYAK 157
G F++G H HV L Y D + LL +AK
Sbjct: 128 HGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAK 187
Query: 158 YGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMS 217
G L V+R +FD + E D+ +W +L A E L LF +M+++
Sbjct: 188 AGELDVARKVFDGMPERDVVSWTIMLSAY------------SKAKRPHETLDLFQEMRLA 235
Query: 218 RRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLA 277
P+EVT++++ISAC+ LG G H ++ N + +L+DMY KCGCL A
Sbjct: 236 GVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEA 295
Query: 278 CQLFDQLTDRDTFCYNAMI 296
Q+FD+ + +NAM+
Sbjct: 296 WQVFDRTKRKSLITWNAMM 314
>Medtr8g087980.1 | PPR containing plant-like protein | HC |
chr8:36412954-36411351 | 20130731
Length = 515
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 155/302 (51%), Gaps = 34/302 (11%)
Query: 22 LNTLKQVHAQMLTTGLALHTYCLSHLLT---ISSKLASTYALTIFSSIPNPTVFLYNTLI 78
+ KQ+HA +T L +Y S +L +S + YA T+F+ IPNP +F YN++I
Sbjct: 1 MKQTKQIHAHAITNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNIFDYNSII 60
Query: 79 SSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKF 138
+S+T++ SQ H F ++ ++L + ++PNS TF +L KAC Q + +K
Sbjct: 61 TSYTTN-SQFHKLFFVFTKML-NTNIRPNSHTFTTLVKACVSLSSLEQ----VFTLSMKL 114
Query: 139 LEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXL 198
+FV +S++N ++K+ + ++R +FD+ S ++ W +L+ +
Sbjct: 115 GNSSDVYFV-SSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDV 173
Query: 199 ED-------ADLSL------------EALYLFCDMQMSRR-----RPNEVTLVALISACS 234
D A S E + LF +++ + + N LV++++AC+
Sbjct: 174 FDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACT 233
Query: 235 NLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNA 294
+GA +G W H Y+ N L+ + +GTAL+D Y KCG + A ++F+++ +D ++A
Sbjct: 234 MVGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSA 293
Query: 295 MI 296
MI
Sbjct: 294 MI 295
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 108/262 (41%), Gaps = 51/262 (19%)
Query: 9 NHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIP 67
+H L++ C SL++L+QV + G + Y +S ++ SK ++ + A +F
Sbjct: 88 SHTFTTLVKACVSLSSLEQVFTLSMKLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECS 147
Query: 68 NPTVFLYNTLISSFTS----------------------------------HSSQIHLAFS 93
N V + +L+S + S S + L
Sbjct: 148 NRNVVCWTSLVSGYCSCGLVNEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRE 207
Query: 94 LYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLK-FLEPPYDHFVQASLL 152
L + L+ N S+ AC G F+ G +H++V + LE YD + +L+
Sbjct: 208 LKKKDKGCACLKFNGALLVSVLNACTMVGA-FEEGKWIHSYVEENGLE--YDLELGTALI 264
Query: 153 NFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFC 212
+FY K G + + +F+++ D+ATW+ ++ AL LF
Sbjct: 265 DFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGLAINGNNKM------------ALELFE 312
Query: 213 DMQMSRRRPNEVTLVALISACS 234
M+ +PNEVT V +++AC+
Sbjct: 313 KMEKVGPKPNEVTFVGVLTACN 334
>Medtr3g117150.1 | organelle transcript processing protein, putative
| HC | chr3:54810037-54807667 | 20130731
Length = 571
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 144/277 (51%), Gaps = 24/277 (8%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSKLAS---TYALTIFSSIPNPTVFLYNTLISSFTS 83
Q+HAQ + + + S L T +++ S YA + ++ P+ + YNT+I +++
Sbjct: 11 QLHAQFIKSQ---NQRNFSKLFTFAAQSPSGDLNYARLLLNTNPSLNSYYYNTIIRAYSH 67
Query: 84 HSSQIH--LAFSLYNRILAHKT--LQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFL 139
S+ H A SL+ +L T +P++FT+ K+C G Q LH + K +
Sbjct: 68 TSNPTHHFQALSLFIFMLQPHTNVPKPDTFTYSFALKSC-GRLKLTQQAKQLHGFINK-M 125
Query: 140 EPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLE 199
+D ++Q +L++ Y++ G L ++R +FD++S D+ +W +++
Sbjct: 126 GFGFDLYIQNALIHMYSEIGELVIARQVFDRMSHRDVVSWTSMIAGFV------------ 173
Query: 200 DADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRF 259
+ L++EA+ LF M NE T+++++ C++ GALS G H + +
Sbjct: 174 NHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKEKGIDFKAN 233
Query: 260 VGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
V TAL+ MYSKCGCL A ++FD + DRD F + AMI
Sbjct: 234 VCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMI 270
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 24/267 (8%)
Query: 13 LKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTV 71
LKL Q+ KQ+H + G Y + L+ + S++ A +F + + V
Sbjct: 109 LKLTQQA------KQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQVFDRMSHRDV 162
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPL 131
+ ++I+ F +H + A L+ R+L + N T S+ + C SG G +
Sbjct: 163 VSWTSMIAGFVNHHLTVE-AIQLFQRML-EVGVDVNEATVISVLRGCADSGA-LSVGRKV 219
Query: 132 HAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXX 191
H ++K + V +L++ Y+K G L +R +FD + + D+ W ++
Sbjct: 220 HG-IVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYG------ 272
Query: 192 XXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG-VWTHCYLL 250
L + EA+ LF +M+ +P+E T++ ++SA N G + +G ++ +
Sbjct: 273 ------LACHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREGYMFFNDVQK 326
Query: 251 RNNLKLNRFVGTALVDMYSKCGCLNLA 277
R ++K N +VD+ +K GCL A
Sbjct: 327 RYSMKPNIKHFGCMVDLLAKGGCLEEA 353
>Medtr3g005330.1 | PPR containing plant-like protein | HC |
chr3:156847-154639 | 20130731
Length = 479
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 144/295 (48%), Gaps = 28/295 (9%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST--YALTIFSSIPNP 69
++ L C +LN LKQ+HA++ TG H LS + + ++ YAL +F IP P
Sbjct: 15 LMNLFNHCSTLNHLKQIHARIFLTGFN-HNLILSGKIIMFCAVSQNMNYALNVFDKIPKP 73
Query: 70 TVFLYNTLISSFTSHSSQIHLAFSLYNRI-LAHKTLQPNSFTFPSLFKACCGSGHWFQYG 128
FL+NT+I F + ++ H A + R+ LAH+ P++FTF + K + G
Sbjct: 74 DSFLWNTMIRGFGNSTTHSHNAIHFFKRMQLAHR---PDNFTFSFILK-IIARLRFVNLG 129
Query: 129 PPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXX 188
LH + KF + +V+ SL++ Y + ++ LF+++ +P+L +WN+++
Sbjct: 130 KQLHCSLFKFGFENHT-YVRNSLIHMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVY 188
Query: 189 XXXXXXXXXLEDADLSLEALYLFCDMQMSRR-----RPNEVTLVALISACSNLGALSQGV 243
EA+ LF M + +P+ TLV +SAC +G+L G
Sbjct: 189 CGKYN------------EAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGR 236
Query: 244 WTHCYLLR--NNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H ++ N+ + V ALVDMY+KCG + A + F + ++ +N MI
Sbjct: 237 KVHSFVRDGVNSFGESISVFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMI 291
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 121/285 (42%), Gaps = 30/285 (10%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
ILK++ + +N KQ+H + G HTY + L+ + L A +F + P
Sbjct: 116 ILKIIARLRFVNLGKQLHCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPN 175
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHK----TLQPNSFTFPSLFKACCGSGHWFQ 126
+ +N++I + + + A L+ +++ + LQP+ T AC G
Sbjct: 176 LVSWNSIIDCHV-YCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGS-LD 233
Query: 127 YGPPLHAHVLKFLEPPYDHFVQA-----SLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
+G +H+ F+ + F ++ +L++ YAK G + + F + ++ +WN
Sbjct: 234 FGRKVHS----FVRDGVNSFGESISVFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNV 289
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACSNLGALS 240
++ EAL LF M + RP+E+T + ++ ACS+ G +
Sbjct: 290 MILGFASHGNGE------------EALALFTRMLHENVERPDEITFLCVLCACSHGGLVD 337
Query: 241 QGVWTHCYLLRN-NLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
+G + R+ N+K +VD+ + G A +L +
Sbjct: 338 EGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIKSM 382
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 110/214 (51%), Gaps = 21/214 (9%)
Query: 104 LQPNSFTFPSLFKACC--GSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRL 161
++PN T +L AC S +G LH H K D V +L++ YAK G+L
Sbjct: 83 VEPNHITLITLLSACAHSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKL 142
Query: 162 CVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDA-------------------D 202
+R +FDQ+ +L +WNT++ L D +
Sbjct: 143 DYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKE 202
Query: 203 LSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGT 262
EAL F +MQ++ P+ VT++A+ISAC+NLGAL G+W H +++ + N V
Sbjct: 203 CYEEALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLN 262
Query: 263 ALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+L+DMY++CGC+ LA Q+FD ++ R+ +N++I
Sbjct: 263 SLIDMYARCGCIELARQVFDGMSQRNLVSWNSII 296
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACS---NLGALSQGVWTHCYLLRNNLKLNR-FV 260
L+A F M + PN +TL+ L+SAC+ + +++ G H + ++ +N V
Sbjct: 69 LKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKTSITFGAALHTHAFKHGFAMNDVMV 128
Query: 261 GTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
GTAL+DMY+KCG L+ A +FDQ+ R+ +N MI
Sbjct: 129 GTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMI 164
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 118/297 (39%), Gaps = 61/297 (20%)
Query: 33 LTTGLALHTYCLSHLLTISSKLAST-------------YALTIFSSIPNPTVFLYNTLIS 79
+T G ALHT+ H ++ + T YA +F + + +NT+I
Sbjct: 106 ITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMID 165
Query: 80 SFTSHSSQIHLAFSLYNRILAHKTLQ------------------------------PNSF 109
+ + + A L++++ + P+
Sbjct: 166 GYMKNG-DVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFV 224
Query: 110 TFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHF-VQASLLNFYAKYGRLCVSRCLF 168
T ++ AC G G L H L + D+ V SL++ YA+ G + ++R +F
Sbjct: 225 TVIAIISACANLG---ALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVF 281
Query: 169 DQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVA 228
D +S+ +L +WN+++ L+ +AL F M+ PN V+ +
Sbjct: 282 DGMSQRNLVSWNSIIVGFAVN------------GLADKALSFFRSMKKEGLEPNGVSYTS 329
Query: 229 LISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTA-LVDMYSKCGCLNLACQLFDQL 284
++ACS+ G + +G+ + R++ R LVD+YS+ G L A + ++
Sbjct: 330 ALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKM 386
>Medtr1g059720.1 | organelle transcript processing protein, putative
| HC | chr1:25973337-25971195 | 20130731
Length = 574
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 147/286 (51%), Gaps = 18/286 (6%)
Query: 13 LKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSK-LASTYALTIFSSIPNPTV 71
L+LL C ++ ++QVHA L G + + LL + A A +F +P
Sbjct: 7 LRLLYTCRNIFHIRQVHANALINGTFNNLIVANKLLHFYVQHKAINDAYYLFDEMPTRDP 66
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPL 131
++ ++ F S + ++ + IL + P+++T P + +AC Q G +
Sbjct: 67 TTWSIMVGGF-SKLGDYNNCYATFREIL-RCNITPDNYTLPFVIRACRDRKD-IQMGRMI 123
Query: 132 HAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXX 191
H VLK+ DHFV A+L++ YAK + +R LFD + DL TW ++
Sbjct: 124 HDVVLKY-GLVLDHFVCATLVDMYAKCAVIEDARKLFDVMVSKDLVTWTVMIGCYA---- 178
Query: 192 XXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLR 251
D D + E+L LF ++ ++V +V +++AC+ LGA+ + + + Y+
Sbjct: 179 --------DYD-AYESLVLFDRLREEGFVSDKVAMVTVVNACAKLGAMHRARFVNEYICG 229
Query: 252 NNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
N L L+ +GTA++DMY+KCGC++ A ++FD++ +++ ++AMI
Sbjct: 230 NGLSLDVILGTAMIDMYAKCGCVDSAREVFDRMKEKNVISWSAMIA 275
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/301 (19%), Positives = 129/301 (42%), Gaps = 44/301 (14%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
+++ + + + +H +L GL L + + L+ + +K A A +F + +
Sbjct: 107 VIRACRDRKDIQMGRMIHDVVLKYGLVLDHFVCATLVDMYAKCAVIEDARKLFDVMVSKD 166
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+ + +I + + + + + L++R L + + ++ AC G
Sbjct: 167 LVTWTVMIGCYADYDA--YESLVLFDR-LREEGFVSDKVAMVTVVNACAKLGA------- 216
Query: 131 LHAHVLKFLEP-------PYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
H +F+ D + ++++ YAK G + +R +FD++ E ++ +W+ ++
Sbjct: 217 --MHRARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSAREVFDRMKEKNVISWSAMI 274
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG- 242
EAL LF M PN +T V+L+ ACS+ G +G
Sbjct: 275 AAYGYHGK------------GKEALDLFHMMLSCGISPNRITFVSLLYACSHSGLTDEGL 322
Query: 243 -----VWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL-TDRDTFCYNAMI 296
+W Y +R ++K T +VD+ + G L+ A +L + + ++D ++A++
Sbjct: 323 HFFDSMWRD-YGVRPDVKHY----TCVVDLLGRAGRLDEALKLIETMNVEKDERLWSALL 377
Query: 297 G 297
G
Sbjct: 378 G 378
>Medtr8g027150.1 | PPR containing plant-like protein | HC |
chr8:9538952-9542067 | 20130731
Length = 506
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 143/301 (47%), Gaps = 41/301 (13%)
Query: 22 LNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFSSIPNPTVFLYNTLISSF 81
+N +KQ H L + + LL I + YA + PT FLYN LI +
Sbjct: 1 MNQVKQFHGYTLRNNIDNTKILIEKLLQIPN---LNYAQVLLHHSQKPTTFLYNKLIQAC 57
Query: 82 TSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEP 141
+S H F+LY+++ H PN +TF LF C S G +H +F++
Sbjct: 58 SSK----HQCFTLYSQMYLHGH-SPNQYTFNFLFTTCT-SLSSLSLGQMIHT---QFMKS 108
Query: 142 PYDH--FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLX--------------- 184
+ H F +LL+ YAK G L +R +FD++S +LATWN ++
Sbjct: 109 GFKHDVFASTALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELF 168
Query: 185 -----XXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRR---PNEVTLVALISACSNL 236
L++ +AL LF M+M R + PNEVTL +++ AC+NL
Sbjct: 169 WLMPSRNVVSWTTMVSGYLQNKQYE-KALGLF--MRMEREKDVSPNEVTLASVLPACANL 225
Query: 237 GALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFC-YNAM 295
GAL G Y +N N FV A+++MY+KCG +++A ++FD++ C +N+M
Sbjct: 226 GALEIGQRVEVYARKNGFFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSM 285
Query: 296 I 296
I
Sbjct: 286 I 286
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 114/246 (46%), Gaps = 26/246 (10%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
AL +F +P+ V + T++S + + Q A L+ R+ K + PN T S+ AC
Sbjct: 164 ALELFWLMPSRNVVSWTTMVSGYL-QNKQYEKALGLFMRMEREKDVSPNEVTLASVLPAC 222
Query: 119 CGSGHWFQYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISE-PD 175
G + G + + K F + + FV ++L YAK G++ V+ +FD+I +
Sbjct: 223 ANLGA-LEIGQRVEVYARKNGFFK---NLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRN 278
Query: 176 LATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSN 235
L +WN+++ +A+ L+ M P++VT V L+ AC++
Sbjct: 279 LCSWNSMIMGLAVHGQCH------------KAIQLYDQMLREGTLPDDVTFVGLLLACTH 326
Query: 236 LGALSQGVWTHCYLLRN-NL--KLNRFVGTALVDMYSKCGCLNLACQLFDQLTDR-DTFC 291
G + +G + R+ N+ KL + +VD+ + G L A ++ ++ + D+
Sbjct: 327 GGMVEKGKHVFQSMTRDFNIIPKLEHY--GCMVDLLGRAGRLTEAYEVIKRMPMKPDSVI 384
Query: 292 YNAMIG 297
+ ++G
Sbjct: 385 WGTLLG 390
>Medtr2g018870.1 | PPR containing plant-like protein | HC |
chr2:6013889-6015841 | 20130731
Length = 613
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 151/292 (51%), Gaps = 28/292 (9%)
Query: 13 LKLLQKC-HSLNTLKQVHAQMLTTGLALHT-----YCLSHLLTISSKLASTYALTIFSSI 66
+ LLQ C S LKQ+HA + + L+ Y + ++++S+ + +YA +F+ +
Sbjct: 43 IALLQNCASSKQKLKQIHAFSIRHNVPLNNPDIGKYLIFTIVSLSAPM--SYAHNVFTLL 100
Query: 67 PNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQ 126
NP VF +NT+I + + S A LY ++L ++P++ T+P L KA S + +
Sbjct: 101 YNPNVFTWNTMIRGY-AESDNSTPALGLYRKMLG-SCVEPDTHTYPFLLKAISKSLN-VR 157
Query: 127 YGPPLHAHVLKFLEPPYDH--FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLX 184
G +H+ ++ ++ FV+ SLL+ YA G + +F+ + E DL WN+++
Sbjct: 158 DGEMIHSVTVR---NGFESLIFVRNSLLHIYAACGDTESAYKVFELMGERDLVAWNSVIN 214
Query: 185 XXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVW 244
EAL LF +M + P+ T+V+L SAC+ LGAL G
Sbjct: 215 GFALNGKPN------------EALSLFREMSLKGVEPDGFTVVSLFSACAELGALELGRR 262
Query: 245 THCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H YLL+ L N V +L+D Y+KCG + A Q+F ++++R+ + +++
Sbjct: 263 VHVYLLKVGLTGNLHVNNSLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLV 314
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 116/232 (50%), Gaps = 17/232 (7%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
+LK + K ++ + +H+ + G + + LL I + T A +F +
Sbjct: 146 LLKAISKSLNVRDGEMIHSVTVRNGFESLIFVRNSLLHIYAACGDTESAYKVFELMGERD 205
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+ +N++I+ F + + + + A SL+ R ++ K ++P+ FT SLF AC G + G
Sbjct: 206 LVAWNSVINGF-ALNGKPNEALSLF-REMSLKGVEPDGFTVVSLFSACAELGA-LELGRR 262
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+H ++LK H V SLL+FYAK G + ++ +F ++SE ++ +W +L+
Sbjct: 263 VHVYLLKVGLTGNLH-VNNSLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVG----- 316
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG 242
L EAL LF +M+ + P E+T V ++ ACS+ G L +G
Sbjct: 317 -------LAVNGFGEEALGLFKEMERQKIVPREITFVGVLYACSHCGMLDEG 361
>Medtr1g083890.1 | PPR containing plant-like protein | HC |
chr1:37365601-37367754 | 20130731
Length = 490
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 142/313 (45%), Gaps = 38/313 (12%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPT 70
IL LL + L Q+HA L GL LSH +++ + L YA TIF+ +P
Sbjct: 12 ILHLLHNTKTQTHLPQIHAHFLRHGLHHSNQILSHFVSVCTSLHQIPYATTIFNHTHHPN 71
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+ L+N++I + +S H +F +N + + P++FTFP L KA + G
Sbjct: 72 ILLFNSIIKAHSSFPP-FHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRD-YDLGQC 129
Query: 131 LHAHV--LKFLEPPYDHF-VQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTL----- 182
LHAHV L F Y H V+ LL Y+ G++ + +FD++ ++ WN +
Sbjct: 130 LHAHVTALGF----YRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIMINGFC 185
Query: 183 --------------LXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVA 228
+ L EA +F +M P++ TLV
Sbjct: 186 KMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVT 245
Query: 229 LISACSNLGALSQGVWTHCY-----LLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQ 283
++ C+ LG + G W H Y LLR + VG +LVD Y KCG L A ++F++
Sbjct: 246 VLPVCARLGDVDAGEWIHSYADGKGLLRKVIS----VGNSLVDFYCKCGNLEAAWKVFNE 301
Query: 284 LTDRDTFCYNAMI 296
+T ++ +NAMI
Sbjct: 302 MTKKNVVSWNAMI 314
>Medtr2g035620.1 | PPR containing plant protein | HC |
chr2:15068017-15065354 | 20130731
Length = 887
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 133/287 (46%), Gaps = 18/287 (6%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
+LK LN KQ+HA + G AL T + + + K A +F I N
Sbjct: 91 VLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSFVNMYGKCGDIDAARRVFDEITNRD 150
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+N++I++ + LA L+ R++ + + P SFT S+ AC + G
Sbjct: 151 DVSWNSMINA-ACRFEEWELAVHLF-RLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQ 208
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+HA VL+ + F +L+ YAK GR+ ++ LFD + DL +WNT++
Sbjct: 209 VHAFVLR--NGDWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTII------- 259
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
L D EAL M S RPN VTL +++ ACS+L L G H ++L
Sbjct: 260 -----SSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVL 314
Query: 251 RNN-LKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
NN L N FVG ALVDMY C +FD + R +NAMI
Sbjct: 315 MNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMI 361
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 140/289 (48%), Gaps = 26/289 (8%)
Query: 29 HAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFSSIPNP-------------TVFLYN 75
H +ML G +H + L + I + + ++ + P T+ ++N
Sbjct: 299 HLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWN 358
Query: 76 TLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC--CGSGHWFQYGPPLHA 133
+I+ + + + A L+ ++ L PNS T S+ AC C S F +H+
Sbjct: 359 AMIAGYVRNEFD-YEAIELFVEMVFELGLSPNSVTLSSVLPACVRCES---FLDKEGIHS 414
Query: 134 HVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXX 193
V+K+ D +VQ +L++ Y++ GR+ ++R +F ++ D+ +WNT++
Sbjct: 415 CVVKW-GFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHD 473
Query: 194 XXXXL------EDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
L A+ + + D + +PN VTL+ ++ C+ L AL +G H
Sbjct: 474 DALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHA 533
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
Y ++ L + VG+ALVDMY+KCGCLNL+ +F+Q++ R+ +N +I
Sbjct: 534 YAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLI 582
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 36/248 (14%)
Query: 18 KCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNT 76
+C S + +H+ ++ G Y + L+ + S++ A +IF S+ + +NT
Sbjct: 402 RCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNT 461
Query: 77 LISSFT---SHSSQIHLAFSLYNRILAHKT-------------LQPNSFTFPSLFKACCG 120
+I+ + H ++L + H+ L+PNS T ++ C
Sbjct: 462 MITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAA 521
Query: 121 SGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWN 180
G +HA+ +K + D V ++L++ YAK G L +SR +F+Q+S ++ TWN
Sbjct: 522 LAA-LGKGKEIHAYAVKQMLSK-DVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWN 579
Query: 181 TLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDM-----QMSRRRPNEVTLVALISACSN 235
L+ EAL LF M RPNEVT +A+ ++ S+
Sbjct: 580 VLIMAYGMHGKGE------------EALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSH 627
Query: 236 LGALSQGV 243
G + +G+
Sbjct: 628 SGMVDEGL 635
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 50/91 (54%)
Query: 206 EALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALV 265
+A+ + +M + P+ A++ A + + L+ G H ++ + L V + V
Sbjct: 68 QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSFV 127
Query: 266 DMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+MY KCG ++ A ++FD++T+RD +N+MI
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMI 158
>Medtr5g043920.1 | PPR containing plant-like protein | HC |
chr5:19295539-19293687 | 20130731
Length = 498
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 144/288 (50%), Gaps = 20/288 (6%)
Query: 13 LKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISS----KLASTYALTIFSSIPN 68
L LL HS+ L Q+ AQ+ L T+ LS L+ S K S +F N
Sbjct: 14 LNLLNSLHSITKLHQLQAQIHLNSLHNDTHILSQLVYFFSLSPFKNLSHARKLVFHFSNN 73
Query: 69 PTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYG 128
P+ +N LI + S S I + + + ++PN T+P +FK+C + + G
Sbjct: 74 PSPISWNILIRGYASSDSPIESIWVF--KKMRENGVKPNKLTYPFIFKSCAMALVLCE-G 130
Query: 129 PPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXX 188
+HA ++KF D +V +++NFY ++ +R +FD++ + +WN+++
Sbjct: 131 KQVHADLVKF-GLDSDVYVCNNMINFYGCCKKIVYARKVFDEMCVRTIVSWNSVMTAC-- 187
Query: 189 XXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCY 248
+E+ LS + + F M+ P+E ++V L+S C+ LG LS G W H
Sbjct: 188 ---------VENVWLS-DGIGYFFKMRDCAFEPDETSMVLLLSVCAELGYLSLGRWVHSQ 237
Query: 249 LLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L+ + L+ +GTALVDMY K G L A +F+++ R+ + ++AMI
Sbjct: 238 LILKGMVLSVHLGTALVDMYGKSGALGYARVVFERMEKRNVWTWSAMI 285
>Medtr8g479320.2 | PPR containing plant-like protein | HC |
chr8:33809079-33805443 | 20130731
Length = 498
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 141/273 (51%), Gaps = 20/273 (7%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSK-LASTYALTIFSSIPNPTVFLYNTLISSFTSHS 85
Q+HA M+ +G + + S L+ +K A A IF ++ + +LI+ F+++
Sbjct: 67 QIHAYMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANK 126
Query: 86 SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD- 144
Q A L+ +L + ++PN FT S+ AC G ++ P LH HV+K +D
Sbjct: 127 -QGRDALLLFKEMLGTQ-IRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIK---QGFDT 181
Query: 145 -HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
FV +SL++ YA +G++ + LF++ SE D +NT++
Sbjct: 182 SSFVISSLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLY------------ 229
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTA 263
S +AL LF +M+ P + TL +++SACS+L L QG H +++ + N +V +
Sbjct: 230 SEDALKLFVEMREKNMSPTDHTLSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVAST 289
Query: 264 LVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L+DMYSK G ++ A + DQ + ++T + +MI
Sbjct: 290 LIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMI 322
>Medtr8g479320.1 | PPR containing plant-like protein | HC |
chr8:33809124-33805421 | 20130731
Length = 498
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 141/273 (51%), Gaps = 20/273 (7%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSK-LASTYALTIFSSIPNPTVFLYNTLISSFTSHS 85
Q+HA M+ +G + + S L+ +K A A IF ++ + +LI+ F+++
Sbjct: 67 QIHAYMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANK 126
Query: 86 SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD- 144
Q A L+ +L + ++PN FT S+ AC G ++ P LH HV+K +D
Sbjct: 127 -QGRDALLLFKEMLGTQ-IRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIK---QGFDT 181
Query: 145 -HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
FV +SL++ YA +G++ + LF++ SE D +NT++
Sbjct: 182 SSFVISSLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLY------------ 229
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTA 263
S +AL LF +M+ P + TL +++SACS+L L QG H +++ + N +V +
Sbjct: 230 SEDALKLFVEMREKNMSPTDHTLSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVAST 289
Query: 264 LVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L+DMYSK G ++ A + DQ + ++T + +MI
Sbjct: 290 LIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMI 322
>Medtr4g007160.1 | PPR containing plant-like protein | HC |
chr4:976511-978646 | 20130731
Length = 595
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 141/287 (49%), Gaps = 20/287 (6%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
+LK + + +KQ+H + T L + + + + S T A +F +P
Sbjct: 115 VLKSCARFSGIAEVKQIHTLAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRD 174
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
V + LIS + + + A +L+ R+ + PN+ TF S+ AC G G
Sbjct: 175 VVSWTGLISGYMK-AGLFNDAVALFLRM----DVAPNAATFVSILGAC-GKLGCLNLGKG 228
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+H V K+ + V +L++ Y K + ++ LFD+I E D+ +W +++
Sbjct: 229 IHGLVSKYPHGK-ELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISG----- 282
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
L E+L LF +M S P+ V L +++SAC++LG L G W H Y+
Sbjct: 283 -------LVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYID 335
Query: 251 RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+ +K + +GT+L+DMY+KCGC+ +A Q+F+ L ++ +NA IG
Sbjct: 336 HSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIG 382
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 129/301 (42%), Gaps = 48/301 (15%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIF----SSIP 67
+L +Q+C+ L + KQ+HAQ+L + L + + L T A F + I
Sbjct: 12 LLDFIQRCNDLRSFKQIHAQLLRSTL------------VDNDLVVTKAANFFGKHVTDIR 59
Query: 68 NPTVFLY-----------NTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFK 116
P FL N +IS + + + A +Y ++ + + P+ +T P++ K
Sbjct: 60 YPCNFLKQFDWSFSSFPCNLIISGYGAGNFP-WAAIRIYRWVVGNGFV-PDVYTVPAVLK 117
Query: 117 ACCGSGHWFQYGPPLHAHVLKFLEPPY-DHFVQASLLNFYAKYGRLCVSRCLFDQISEPD 175
+C + H L + D FVQ S ++ Y+ G + +FD + D
Sbjct: 118 SCA---RFSGIAEVKQIHTLAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRD 174
Query: 176 LATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSN 235
+ +W L+ A L +A+ LF M ++ PN T V+++ AC
Sbjct: 175 VVSWTGLISGYM------------KAGLFNDAVALFLRMDVA---PNAATFVSILGACGK 219
Query: 236 LGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAM 295
LG L+ G H + + V L+DMY KC + A +LFD++ ++D + +M
Sbjct: 220 LGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSM 279
Query: 296 I 296
I
Sbjct: 280 I 280
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 17/232 (7%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
IL K LN K +H + + L+ + K S T A +F IP
Sbjct: 213 ILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPEKD 272
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+ + ++IS + + L+ +L +P+ S+ AC G YG
Sbjct: 273 IVSWTSMISGLVQYQCP-QESLDLFYEMLG-SGFEPDGVILTSVLSACASLGL-LDYGRW 329
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+H ++ +D + SL++ YAK G + +++ +F+ + ++ TWN +
Sbjct: 330 VHEYI-DHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIGG----- 383
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG 242
L EAL F + S RPNE+T +A+ SAC + G + +G
Sbjct: 384 -------LAINGHGQEALKQFGYLVESGTRPNEITFLAVFSACCHSGLVDEG 428
>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:988953-991582 | 20130731
Length = 838
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 137/283 (48%), Gaps = 17/283 (6%)
Query: 16 LQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFSSIPNPTVFLY- 74
LQ C +L LKQ+H ML G+ ++ + + + + YAL F LY
Sbjct: 39 LQTCKTLIELKQLHCNMLKKGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYT 98
Query: 75 -NTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHA 133
NTLI + + S A +Y ++ + P++FTFP L AC F G +H
Sbjct: 99 CNTLIRGYAA-SGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKI-MAFSEGVQVHG 156
Query: 134 HVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXX 193
V+K + D FV SL++FYA G++ + R +FD++ E ++ +W +L+
Sbjct: 157 VVVK-MGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSV----- 210
Query: 194 XXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNN 253
+++ EA+ LF +M PN VT+V ISAC+ L L G +
Sbjct: 211 -------VNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELG 263
Query: 254 LKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+K N V AL+DMY KCG + ++FD+ +D++ YN ++
Sbjct: 264 VKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIM 306
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 136/312 (43%), Gaps = 24/312 (7%)
Query: 5 NPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYAL-TIF 63
NP+ + K L K+V M G+ +T ++ LL + K YA+ IF
Sbjct: 232 NPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIF 291
Query: 64 SSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
+ + +YNT++S++ H + L + K +P+ T S AC G
Sbjct: 292 DEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDE--MLQKGQRPDKVTMLSTIAACAQLGD 349
Query: 124 WFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
G HA+V + D+ A +++ Y K G+ + +FD +S + TWN+L+
Sbjct: 350 -LSVGKSSHAYVFRNGLERLDNISNA-IIDMYMKCGKREAACKVFDSMSNKTVVTWNSLI 407
Query: 184 XXXXXXXX-------------------XXXXXXLEDADLSLEALYLFCDMQMSRRRPNEV 224
+ A + EA+ L +MQ + + V
Sbjct: 408 AGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRV 467
Query: 225 TLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
T+V + SAC LGAL W + Y+ +N++ ++ +GTALVDM+S+CG A ++F+ +
Sbjct: 468 TMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENM 527
Query: 285 TDRDTFCYNAMI 296
RD + A I
Sbjct: 528 EKRDVSAWTAAI 539
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 17/271 (6%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPTVFLYNTLISSFTSHS 85
QVH ++ GL + + L+ + +F + V + +LI+ + S
Sbjct: 153 QVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGY-SVV 211
Query: 86 SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDH 145
+ A L+ ++ ++PN T AC + G + +++ L +
Sbjct: 212 NMAKEAVCLFFEMV-EVGVEPNPVTMVCAISACAKLKD-LELGKKV-CNLMTELGVKSNT 268
Query: 146 FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSL 205
V +LL+ Y K G + R +FD+ S+ +L +NT++ L+
Sbjct: 269 LVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQH------------GLAG 316
Query: 206 EALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALV 265
E L + +M +RP++VT+++ I+AC+ LG LS G +H Y+ RN L+ + A++
Sbjct: 317 EVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAII 376
Query: 266 DMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
DMY KCG AC++FD ++++ +N++I
Sbjct: 377 DMYMKCGKREAACKVFDSMSNKTVVTWNSLI 407
>Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:14788174-14785760 | 20130731
Length = 804
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 150/293 (51%), Gaps = 18/293 (6%)
Query: 5 NPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIF 63
NP+ +L +L + +VH L G+ + + L+ + +K S+ A TIF
Sbjct: 337 NPVTISSMLPVLGELGLFKLGMEVHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTIF 396
Query: 64 SSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
+ + + + +N+++++F + A L ++ AH PN+ TF ++ AC G
Sbjct: 397 NKMGDRNIVSWNSMVANFAQNRHHF-AAVELLRQMQAHGE-NPNNVTFTNVLPACARLG- 453
Query: 124 WFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
+ G +HA +++ D F+ +L + Y+K G L ++R +F+ +S D ++N L+
Sbjct: 454 FLNVGKEIHARIIQ-TGCATDLFLSNALTDMYSKCGHLSLARNVFN-VSIKDKVSYNILI 511
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
S E+L LF +M++S P+ V+ + +ISAC++L ++ QG
Sbjct: 512 IGYSQTTN------------SSESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSIKQGK 559
Query: 244 WTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H +L+R + F +L+D+Y+KCG ++LA ++FD++ +D +N MI
Sbjct: 560 EIHGHLVRKLFHTHLFAANSLLDLYTKCGRIDLATKVFDRIQHKDVASWNTMI 612
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 138/285 (48%), Gaps = 34/285 (11%)
Query: 29 HAQMLTTGLALHTYC-----LSHLLTISSKLASTYA--------LTIF-SSIP-NPTVFL 73
H+Q L+ LH + L H ++IS+ L YA L +F +++P + T FL
Sbjct: 43 HSQTLSQTNQLHAFSILNAFLPHSVSISASLILKYASFRHPETSLILFQNTLPFSKTAFL 102
Query: 74 YNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHA 133
+NTLI +++ + F +YN + ++P+ T+P + KAC F G +H
Sbjct: 103 WNTLIRAYSI--AGFFDGFGVYN-TMVRSGVKPDDHTYPFVLKACSDYLK-FDKGREVHG 158
Query: 134 HVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXX 193
V K + D FV +LL FY G + +FD++ E D +WNT++
Sbjct: 159 VVFK-VGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVSWNTVI---------- 207
Query: 194 XXXXLEDADLSLEALYLFCDMQMSR--RRPNEVTLVALISACSNLGALSQGVWTHCYLLR 251
D E+L F +M ++ RP+ VT+V+++ C++ + H Y+ +
Sbjct: 208 --GLCSDRGFHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGYVFK 265
Query: 252 NNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L + VG ALVD+Y KCG ++FD++ +R+ +NA+I
Sbjct: 266 VGLSGHVKVGNALVDVYGKCGSEEACKKVFDEMDERNEVSWNAVI 310
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 121/286 (42%), Gaps = 15/286 (5%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
+LK + ++VH + G + + LL A+ +F +
Sbjct: 140 VLKACSDYLKFDKGREVHGVVFKVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERD 199
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+NT+I + ++A ++P+ T S+ C S +
Sbjct: 200 KVSWNTVIGLCSDRGFHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVM-ARI 258
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+H +V K + V +L++ Y K G + +FD++ E + +WN ++
Sbjct: 259 VHGYVFKVGLSGHVK-VGNALVDVYGKCGSEEACKKVFDEMDERNEVSWNAVITGFSFR- 316
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
LS++AL F M + RPN VT+ +++ LG G+ H Y L
Sbjct: 317 -----------GLSMDALDAFRSMINTGMRPNPVTISSMLPVLGELGLFKLGMEVHGYSL 365
Query: 251 RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
R ++ + F+G +L+DMY+K G +A +F+++ DR+ +N+M+
Sbjct: 366 RMGIESDIFIGNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNSMV 411
>Medtr4g108660.1 | PPR containing plant-like protein | HC |
chr4:44998985-45001066 | 20130731
Length = 460
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 147/331 (44%), Gaps = 61/331 (18%)
Query: 12 ILKLLQKCHS-LNTLKQVHAQMLTTGLALHTYCLSHLL-----TISSKLASTYALTIFSS 65
+L LL C++ L T KQ+H + TGL H + LL +IS + + Y+L +F
Sbjct: 12 LLSLLSNCNTTLKTTKQIHTHLYVTGLHTHPFFFGKLLLNCAVSISDHVLN-YSLRLFHH 70
Query: 66 IPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWF 125
PNP F+YNTLI S SHSS + + ++L H TL P+SF+F K G
Sbjct: 71 FPNPDTFMYNTLIRSL-SHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDGCSK 129
Query: 126 QYGPPLHAHVLKFLEPPYDH-FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLX 184
+ G LH+H F DH FV +L++ YA+ G +R +FD++S+P++ WN ++
Sbjct: 130 RQGIQLHSHA--FRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVT 187
Query: 185 XXXXXXXXXXXXXLED-------------------ADLSLEALYLFCDMQM--------- 216
L + A A +FC+M+M
Sbjct: 188 ACFRCGDVEGAWGLFERMPVRNLTSWNTMLAGYVKAGQLWLARRVFCEMKMRDDASWSTM 247
Query: 217 ----------------------SRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNL 254
R RP+EV+L ++SAC+ GA G H ++ +
Sbjct: 248 IVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGF 307
Query: 255 KLNRFVGTALVDMYSKCGCLNLACQLFDQLT 285
V AL+D YSKCG +++A +F ++
Sbjct: 308 LCIVSVNNALIDTYSKCGNVDMAKLVFQHMS 338
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 36/222 (16%)
Query: 74 YNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHA 133
++T+I F + S H AF + +L + +P+ + + AC +G F++G LH
Sbjct: 244 WSTMIVGF-AKSGSFHDAFGFFKELLRDRN-RPSEVSLTGVLSACAQAGA-FEFGKILHG 300
Query: 134 HVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQIS-EPDLATWNTLLXXXXXXX 190
+ K FL V +L++ Y+K G + +++ +F +S E + +W +++
Sbjct: 301 FMEKAGFLCIVS---VNNALIDTYSKCGNVDMAKLVFQHMSAEKCIVSWTSMIAALAMHG 357
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
AD EA+ +F +M+ S RP+ VT ++L+ ACS+ G + QG C L
Sbjct: 358 R---------AD---EAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQG----CALF 401
Query: 251 RNNLKLNRFVGTA--------LVDMYSKCGCLNLACQLFDQL 284
K+ F G +VD+Y + L A + Q+
Sbjct: 402 S---KMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQM 440
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
Query: 167 LFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRR---PNE 223
LF PD +NTL+ L + L +L F +Q+ R P+
Sbjct: 67 LFHHFPNPDTFMYNTLIRS------------LSHSSTPLSSLQPF--IQLLRHPTLLPDS 112
Query: 224 VTLVALISACSNLG-ALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFD 282
+ + +N G + QG+ H + R+ + FVGT L+ MY++CGC A ++FD
Sbjct: 113 FSFAFTLKGIANDGCSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFD 172
Query: 283 QLTDRDTFCYNAMI 296
+++ + +NA++
Sbjct: 173 EMSQPNVVAWNAVV 186
>Medtr2g013500.1 | PPR containing plant-like protein | HC |
chr2:3639056-3640975 | 20130731
Length = 515
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 140/277 (50%), Gaps = 29/277 (10%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTI---SSKLASTYALTIFSSIPNPTVFLYNTLISSFT- 82
++HA+++ +G + + LL S+ + S A +F SIP+P V + +LIS +
Sbjct: 79 EIHARLIKSGHIFDGFIKNTLLYFYLSSNDVVS--ATRVFKSIPSPDVVSWTSLISGLSK 136
Query: 83 -SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEP 141
++ AFS N ++PN+ T S AC G ++G +HA+ LK L
Sbjct: 137 CGFETEAIEAFSSIN-------VKPNALTLVSAISACSSIGA-IKFGKAIHAYGLKSLMI 188
Query: 142 PYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDA 201
+ + L+ YAK G +R +F ++S+ D+ +W TLL
Sbjct: 189 DGNIVFYNAALDLYAKCGFFSNARNVFVKMSKRDVISWTTLLMAYARGGQCG-------- 240
Query: 202 DLSLEALYLFCDMQMS-RRRPNEVTLVALISACSNLGALSQGVWTHCYL-LRNNLKLNRF 259
EA+ +F M +S PNE T+V ++SAC+++G+LS G W H Y+ R +L ++
Sbjct: 241 ----EAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHDYIEKRIDLDVDGN 296
Query: 260 VGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+G ALV+MY KCG + + ++F+ + +D + +I
Sbjct: 297 IGNALVNMYVKCGDMKMGLKVFNMVVHKDVISWGTVI 333
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 114/231 (49%), Gaps = 21/231 (9%)
Query: 67 PNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQ 126
PNP + N + S SH + + F+L N++L+ + N +TF KACC S H
Sbjct: 20 PNPQLLNQNLKLLS-KSHDN-VKAFFNLCNQMLSCSS-SHNHYTFTHALKACC-SYHAHA 75
Query: 127 YGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXX 186
G +HA ++K +D F++ +LL FY + + +F I PD+ +W +L+
Sbjct: 76 KGLEIHARLIKSGH-IFDGFIKNTLLYFYLSSNDVVSATRVFKSIPSPDVVSWTSLI--- 131
Query: 187 XXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTH 246
L EA+ F + + +PN +TLV+ ISACS++GA+ G H
Sbjct: 132 ---------SGLSKCGFETEAIEAFSSINV---KPNALTLVSAISACSSIGAIKFGKAIH 179
Query: 247 CYLLRN-NLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
Y L++ + N A +D+Y+KCG + A +F +++ RD + ++
Sbjct: 180 AYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMSKRDVISWTTLL 230
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 104/245 (42%), Gaps = 35/245 (14%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYAL----------- 60
++ + C S+ +K G A+H Y L L+ + + AL
Sbjct: 159 LVSAISACSSIGAIK--------FGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSN 210
Query: 61 --TIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
+F + V + TL+ ++ + Q A ++ +++ +PN T ++ AC
Sbjct: 211 ARNVFVKMSKRDVISWTTLLMAY-ARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSAC 269
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
G G +H ++ K ++ D + +L+N Y K G + + +F+ + D+ +
Sbjct: 270 ASIGS-LSLGCWVHDYIEKRIDLDVDGNIGNALVNMYVKCGDMKMGLKVFNMVVHKDVIS 328
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
W T++ L + + +F M + P++VT + L+SACS++G
Sbjct: 329 WGTVICG------------LAMNGYGKQVVQMFSHMLVHGVLPDDVTFIGLLSACSHVGL 376
Query: 239 LSQGV 243
+S+G+
Sbjct: 377 VSEGM 381
>Medtr6g059820.1 | PPR containing plant-like protein | HC |
chr6:20520961-20518530 | 20130731
Length = 528
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 156/322 (48%), Gaps = 45/322 (13%)
Query: 9 NHPILKLLQKCHSLNTLKQVHAQMLTTGLA-LHTYCLSHLLTISSKLAST-YALTIFSSI 66
N + +L K + LN LKQ+ + + T G + H Y + S L++ YA IF+ I
Sbjct: 6 NELVTTILTKINHLNQLKQLQSHLTTLGHSQTHFYAFKLIRFCSLNLSNLHYAHQIFNHI 65
Query: 67 PNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQ 126
+P ++L+ +I++F SSQ H F L+ +L + ++PN+F +P + K+ F
Sbjct: 66 HSPNIYLFTAIITAF---SSQQHTTFKLFKTML-NSNIRPNNFIYPHVLKSV---KERFL 118
Query: 127 YGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKY-GRLCVSRCLFDQISEPDLATWNTL- 182
+HA ++K FL P V+ SL++ Y+K G L + +FD++SE ++ + L
Sbjct: 119 V-DLVHAQIVKCGFLNYP---VVETSLVDSYSKVLGGLRDAHKVFDEMSERNIVVFTVLV 174
Query: 183 ---LXXXXXXXXXXXXXXLEDADLSL---------------EALYLFCDMQMS------- 217
L + D D+ E + LF +M +
Sbjct: 175 SGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGG 234
Query: 218 ---RRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCL 274
+PN+VT+V ++SAC + G L G W H Y+ R+ ++ FV ALVDMY KCG L
Sbjct: 235 FCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCGSL 294
Query: 275 NLACQLFDQLTDRDTFCYNAMI 296
LA ++F+ + +N+MI
Sbjct: 295 ELARKVFEMDQRKGLTSWNSMI 316
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 27/232 (11%)
Query: 21 SLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFSSIPNPTVFLYNTLISS 80
L +V +M + + T +S L + L +F + + V +N +IS
Sbjct: 151 GLRDAHKVFDEMSERNIVVFTVLVSGYLRVGD---VEKGLMVFDEMVDRDVPAWNAVISG 207
Query: 81 FTSH---SSQIHLAFSL-YNRILAH----KTLQPNSFTFPSLFKACCGSGHWFQYGPPLH 132
T + S I L + + L K +PN T + AC G G Q G +H
Sbjct: 208 CTQNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVCVLSAC-GHGGMLQLGKWIH 266
Query: 133 AHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+V + F+ D FV +L++ Y K G L ++R +F+ L +WN+++
Sbjct: 267 GYVYRHGFV---VDSFVSNALVDMYGKCGSLELARKVFEMDQRKGLTSWNSMINCYALHG 323
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG 242
EDA E + + C + RP+EVT + L++AC++ G + QG
Sbjct: 324 K------CEDAITFFEKM-VECGGGV---RPDEVTFIGLLNACTHGGLVEQG 365
>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:54376407-54379381 | 20130731
Length = 783
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 136/289 (47%), Gaps = 25/289 (8%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKL----ASTYALTIFSSIP 67
+ L+ K + L Q HAQ + G + + L+ L ++ KL A+ +A +F S+P
Sbjct: 15 LFSLINKASTFPHLAQTHAQFILNG---YRFDLATLTKLTQKLFDFSATRHARALFFSVP 71
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
P +FL+N L+ F+ + S + SLY + + L P++FT+ AC H
Sbjct: 72 KPDIFLFNVLVRGFSLNDSPSS-SISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLML- 129
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
LHAH + + FV ++L++ Y K+ R+ +R +FD + E D WNT++
Sbjct: 130 ---LHAHSI-IDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLV 185
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
+++ LF +M R + T+ A++ A + L L G+ C
Sbjct: 186 KNCCFD------------DSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQC 233
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L+ +V T L+ +YSKCG +N A LF ++ D YNAMI
Sbjct: 234 LALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMI 282
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 123/268 (45%), Gaps = 23/268 (8%)
Query: 33 LTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLA 91
L G Y L+ L+++ SK A +F I P + YN +IS FT++ +
Sbjct: 236 LKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGT-ECS 294
Query: 92 FSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLK---FLEPPYDHFVQ 148
L+ +L + +S T L GH +H +K L P V
Sbjct: 295 VKLFRELLFSGE-RVSSSTIVGLIPLHSPFGH-LHLACSIHGFCVKSGIILNPT----VS 348
Query: 149 ASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEAL 208
+ Y K + ++R LFD+ E + WN ++ A+
Sbjct: 349 TAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTET------------AI 396
Query: 209 YLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMY 268
LF +M + PN VT+ ++SAC+ LG+LS G W H + NL+ N +V TALVDMY
Sbjct: 397 SLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMY 456
Query: 269 SKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+KCG ++ A QLFD +++++T +N MI
Sbjct: 457 AKCGNISEAWQLFDSMSEKNTVTWNTMI 484
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 24/262 (9%)
Query: 28 VHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPTVFLYNTLISSFTSHSS 86
+H + +G+ L+ + I +KL A +F P TV +N +IS +T + S
Sbjct: 332 IHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGS 391
Query: 87 QIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKF--LEPPYD 144
A SL+ ++ + PN+ T ++ AC G +G +H H++K LEP +
Sbjct: 392 T-ETAISLFKEMMKTE-FTPNAVTITTILSACAQLGS-LSFGKWVH-HLIKSENLEP--N 445
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
+V +L++ YAK G + + LFD +SE + TWNT++
Sbjct: 446 IYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLH------------GYG 493
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG--T 262
EAL L+ +M P+ VT ++++ ACS+ G + +G ++ N ++ +
Sbjct: 494 HEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMV-NKYRIEPLIEHYA 552
Query: 263 ALVDMYSKCGCLNLACQLFDQL 284
+VD+ + G L A + ++
Sbjct: 553 CMVDILGRSGQLEKALEFIKKM 574
>Medtr5g006420.1 | organelle transcript processing protein, putative
| HC | chr5:911890-915336 | 20130731
Length = 726
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 135/281 (48%), Gaps = 26/281 (9%)
Query: 25 LKQVHAQML-------TTGLALHTYCLSHLLTISSKLASTYALTIFSSIPNPTVFLYNTL 77
LKQ+HAQ+L T L LS SS + YAL++FS IPNP N L
Sbjct: 32 LKQIHAQILHSNTTPENTNTLLSKLALSICTLSSSSSSLHYALSVFSQIPNPHTHFSNQL 91
Query: 78 ISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLH--AHV 135
+ S SS LY+ + A + F+FPSL KA F +G +H A
Sbjct: 92 LRHL-SRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSA-FNHGLEIHGLASK 149
Query: 136 LKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXX 195
L F++ P F+Q L+ YA R+ +R LFD++ PD WN ++
Sbjct: 150 LGFVDDP---FIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYD-- 204
Query: 196 XXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLK 255
+AL LF DM+ S +P+ V L ++SAC + G LS G H ++ N
Sbjct: 205 ----------DALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYA 254
Query: 256 LNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
++ + TAL++MY+ CG ++LA +++D L+ + AM+
Sbjct: 255 IDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAML 295
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 144/321 (44%), Gaps = 47/321 (14%)
Query: 8 FNHP-ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSS 65
F+ P +LK + K + N ++H G + + L+ + + A +F
Sbjct: 122 FSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDK 181
Query: 66 IPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWF 125
+ +P +N +I + + A L+ + + ++P+S ++ AC +G+
Sbjct: 182 MCHPDAVAWNMIIDGYC-QNGHYDDALRLFEDMRS-SDMKPDSVILCTVLSACGHAGN-L 238
Query: 126 QYGPPLHAHV------------------------LKFLEPPYDH------FVQASLLNFY 155
YG +H V + YD V ++L+ Y
Sbjct: 239 SYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGY 298
Query: 156 AKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQ 215
AK G + +R +FDQ+ E DL W+ ++ ++D EAL LF +M
Sbjct: 299 AKLGMVKDARFIFDQMIERDLVCWSAMISGYA------------ESDQPQEALKLFDEML 346
Query: 216 MSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLN 275
R P+++T++++ISACS++GAL+Q W H Y+ R+ V AL+DMY+KCG L
Sbjct: 347 QKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLV 406
Query: 276 LACQLFDQLTDRDTFCYNAMI 296
A ++F+ + ++ +++MI
Sbjct: 407 KAREVFENMPRKNVISWSSMI 427
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 122/276 (44%), Gaps = 24/276 (8%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFSSIPNPTV 71
++ + C +++ ++++ + + L + T LS + + + IF + +
Sbjct: 263 LINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARF---IFDQMIERDL 319
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPL 131
++ +IS + + S Q A L++ +L +++ P+ T S+ AC G Q +
Sbjct: 320 VCWSAMISGY-AESDQPQEALKLFDEMLQKRSV-PDQITMLSVISACSHVGALAQ-ANWI 376
Query: 132 HAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXX 189
H +V + F V +L++ YAK G L +R +F+ + ++ +W++++
Sbjct: 377 HTYVDRSGFGRALS---VNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMH 433
Query: 190 XXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYL 249
+AD A+ LF M+ PN VT + ++ AC + G + +G +
Sbjct: 434 G---------NAD---SAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSM 481
Query: 250 L-RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
+ + + R +VD+Y + L A +L + +
Sbjct: 482 INEHGISPTREHYGCMVDLYCRANFLRKAIELIETM 517
>Medtr2g019350.1 | PPR containing plant-like protein | HC |
chr2:6301271-6304315 | 20130731
Length = 601
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 24/291 (8%)
Query: 10 HPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFSSIPNP 69
H + L+ C ++ + Q H M+ T L + LS LL +S YA TIF+ I NP
Sbjct: 14 HKLTLALKSCKTITEIHQFHCYMIKTSLTNVPFTLSKLLA-ASIFDMNYASTIFTCIQNP 72
Query: 70 TVFLYNTLISSFTSHSSQIHLAFSLYNRIL-AHKTLQPNSFTFPSLFKACCGSGHWFQYG 128
+F+YNT++ ++ +S + A ++N++ + L P F+F ++ KAC G +G
Sbjct: 73 NLFMYNTMLRGYSVSNSS-NKALPIFNKLRNSGNGLDP--FSFIAVMKAC-GRSFEVGFG 128
Query: 129 PPLHAHVLKFLEPPYDHFVQ--ASLLNFYAKYGRLCVSRCLFDQISEP-DLATWNTLLXX 185
+H V+K FV ++L FY GR+ +R +FD+ E DL +WN L+
Sbjct: 129 RGVHGIVVK---SGNRFFVDLNNTILQFYCVCGRIDDARKVFDECPERNDLVSWNILMGG 185
Query: 186 XXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWT 245
+D S LF S R + T ++L+SA ++G+ G
Sbjct: 186 CVLV-----------SDYSF-VFDLFLKRGCSGIRASVATTLSLLSAAGDIGSFVLGKSL 233
Query: 246 HCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H Y ++ N V TAL+DMY+K GC+ LA ++FD + ++D +N +I
Sbjct: 234 HGYCIKIGFCCNLNVVTALIDMYAKTGCIYLARKVFDGVVEKDVVLWNCLI 284
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 13/172 (7%)
Query: 125 FQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLX 184
F G LH + +K + V A L++ YAK G + ++R +FD + E D+ WN L+
Sbjct: 227 FVLGKSLHGYCIKIGFCCNLNVVTA-LIDMYAKTGCIYLARKVFDGVVEKDVVLWNCLIK 285
Query: 185 XXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVW 244
L EA+ L M+ +PN TLV L+S S G++ +
Sbjct: 286 NYARSC------------LVEEAVALLQSMRQEGVKPNSSTLVGLLSVYSASGSMQGVRY 333
Query: 245 THCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ L+L+ +GTALVD+Y+KCG L+ A ++F+++ ++D + A+I
Sbjct: 334 VTSLIEEEKLELDVILGTALVDVYAKCGFLDEAMEIFERMENKDVKSWTAVI 385
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 100/220 (45%), Gaps = 28/220 (12%)
Query: 36 GLALHTYCL-----------SHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTS 83
G +LH YC+ + L+ + +K Y A +F + V L+N LI ++ +
Sbjct: 230 GKSLHGYCIKIGFCCNLNVVTALIDMYAKTGCIYLARKVFDGVVEKDVVLWNCLIKNY-A 288
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPY 143
S + A +L + + ++PNS T L SG G +++ +
Sbjct: 289 RSCLVEEAVALLQS-MRQEGVKPNSSTLVGLLSVYSASGS--MQGVRYVTSLIEEEKLEL 345
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
D + +L++ YAK G L + +F+++ D+ +W ++
Sbjct: 346 DVILGTALVDVYAKCGFLDEAMEIFERMENKDVKSWTAVISGHGIHGQ------------ 393
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
++ A+ LF M+ RPNE+T +A+++ACS+ G +++GV
Sbjct: 394 AINAISLFNRMENEGFRPNEITFLAILTACSHGGLVTEGV 433
>Medtr4g108890.1 | PPR containing plant-like protein | HC |
chr4:45133263-45138694 | 20130731
Length = 548
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 43/315 (13%)
Query: 12 ILKLLQKCHSLNT-LKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALT--------I 62
I LLQ C++ T + Q+H Q++ GL SH I +KL S YA + +
Sbjct: 18 IFSLLQTCNNTETNILQIHTQVILNGL-------SHKHNIIAKLLSFYAASGKLQHAHKL 70
Query: 63 FSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSG 122
F I NP ++N +I ++ S + + YN+++ + +P+ FT+ L AC G
Sbjct: 71 FIQIHNPKTTVWNHMIRAYASSITPWK-SVQYYNQMVLN-ACEPDGFTYSFLLSACV-RG 127
Query: 123 HWFQYGPPLHAHVLKFLEPPY--DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWN 180
+ G LH VL Y D FV +L+NFYA G + +R +FD +++ + +WN
Sbjct: 128 GLVREGEQLHGIVLA---KGYCSDVFVNTNLINFYADCGGVEQARYVFDDMTQRSVVSWN 184
Query: 181 TLLXXXXX-XXXXXXXXXLEDADLS------------------LEALYLFCDMQMSRRRP 221
+LL E+ + +EAL LF M+ +R
Sbjct: 185 SLLVGYVKCGDFDAARNVFEEIPVRNVVSWTTMIAGYAQNGKCVEALSLFGQMRRARVEL 244
Query: 222 NEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLF 281
++V LVA++SAC+ LG L G W H Y+ + + + AL+ MY+ CG ++ A ++F
Sbjct: 245 DQVVLVAVLSACAELGDLKLGRWIHWYVQERQRQASVRLNNALMHMYASCGIIDEAYRMF 304
Query: 282 DQLTDRDTFCYNAMI 296
+++ + T + +I
Sbjct: 305 TKMSWKTTVSWTIII 319
>Medtr8g066250.1 | PPR containing plant-like protein | HC |
chr8:27517637-27514893 | 20130731
Length = 728
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 143/382 (37%), Gaps = 90/382 (23%)
Query: 1 MKAQNP---IFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST 57
M NP I + LL+ C + L Q+ AQ++T GL + + + +T S+
Sbjct: 1 MVVLNPVQRIVEEKFITLLRSCKNYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRI 60
Query: 58 Y-ALTIFSSIPNPTVFLYNTLISSF--TSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSL 114
+ A +F IP P +N + + H + F NRI PN FTFP +
Sbjct: 61 HHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAG----MPNCFTFPMI 116
Query: 115 FKA--------------CCGSGHWFQY--------------------------------- 127
K+ CC + H F+
Sbjct: 117 IKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNV 176
Query: 128 -------------GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEP 174
G + L L P D + + L++ Y + + +R LFD++
Sbjct: 177 VVWTAIINGYILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNR 236
Query: 175 DLATWNTLLXXXXXXXXXXXXXXL-----EDADLSLEALY-------LFCDMQMSRRR-- 220
D +WN +L + E S L LF + S +R
Sbjct: 237 DTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRML 296
Query: 221 ------PNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCL 274
PN+ TLVA++SACS LGAL G W H Y K N FVG L+DMY+KCG +
Sbjct: 297 VEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVI 356
Query: 275 NLACQLFDQLTDRDTFCYNAMI 296
A +F+ L +D +N +I
Sbjct: 357 ENAVVVFNCLDRKDIISWNTII 378
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 15/181 (8%)
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS 121
+F +P VF +N LI + + + R+L + PN FT ++ AC
Sbjct: 260 VFDEMPERNVFSWNGLIGGYVK-NGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRL 318
Query: 122 GHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
G G +H + + + + FV L++ YAK G + + +F+ + D+ +WNT
Sbjct: 319 GA-LDMGKWVHVYA-ESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNT 376
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
++ + +AL +F M+ P+ VT V ++SAC+++G +
Sbjct: 377 IINGLAIHGH------------APDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKD 424
Query: 242 G 242
G
Sbjct: 425 G 425
>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:38304139-38306748 | 20130731
Length = 739
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 120/235 (51%), Gaps = 16/235 (6%)
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS 121
+FS + + ++TLI+ + S + +F LY R++ + L N ++ A G
Sbjct: 295 VFSYMVFRDIVSWSTLIAGY-SQNGMYKESFELYVRMV-NMGLTTNEIVVSTVLPAL-GK 351
Query: 122 GHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
F+ G +H VLK D V ++L++ YA G + + +F + + D+ WN+
Sbjct: 352 LKLFKQGKEMHNFVLK-QGLLTDVVVGSALVDMYANCGSIKEAESIFRNMLDMDIMVWNS 410
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
L+ D A + F ++ ++ RPN +TLV+++ C+ +GAL Q
Sbjct: 411 LIAGYNLV-----------GDFQ-SAFFTFREIWVAEHRPNHITLVSVLPICTQIGALRQ 458
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G HCY R+ L LN VG +L+DMYSKCG L L ++F+Q+ ++T YN MI
Sbjct: 459 GKEIHCYATRSGLGLNISVGNSLIDMYSKCGFLELGVKVFNQMMVKNTITYNTMI 513
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 132/277 (47%), Gaps = 22/277 (7%)
Query: 26 KQVHAQMLTTGL----ALHTYCLSHLLTISSKLAST-YALTIFSSIPNPTVFLYNTLISS 80
K++HA +L G + HT SHL+ S YA FS +P+ + +N ++ +
Sbjct: 51 KKLHALLLIHGFFHPSSPHTPLCSHLVNAYVNFGSHHYAFLFFSQLPHKSNLAWNAILRA 110
Query: 81 FTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLE 140
S+ L+ Y+ +L H P+++T+P + KAC S + G ++ ++L E
Sbjct: 111 LIG-SNNFTLSIQFYHSMLRHG-FAPDNYTYPLVLKACS-SLQAIEIGRWVYHNIL-INE 166
Query: 141 PPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLED 200
+ FVQ +L++ + K L +R +FD+++ DLATW L+
Sbjct: 167 EKANLFVQCALIDMFVKCESLEDARKVFDEMNVRDLATWTALICGNVWNGEWD------- 219
Query: 201 ADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL-GALSQGVWTHCYLLRNNLKLNRF 259
EA+ LF M++ + + V + +++ C L L G+ H LR+ + +
Sbjct: 220 -----EAVLLFRKMRLEGLKADSVIVASVLPVCGRLMEGLKLGMAMHGCALRSGFDSDLY 274
Query: 260 VGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
V A++DMY KCG + AC +F + RD ++ +I
Sbjct: 275 VSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWSTLI 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 122/275 (44%), Gaps = 18/275 (6%)
Query: 5 NPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIF 63
N I +L L K K++H +L GL S L+ + + S A +IF
Sbjct: 338 NEIVVSTVLPALGKLKLFKQGKEMHNFVLKQGLLTDVVVGSALVDMYANCGSIKEAESIF 397
Query: 64 SSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
++ + + ++N+LI+ + + AF + I + +PN T S+ C G
Sbjct: 398 RNMLDMDIMVWNSLIAGY-NLVGDFQSAFFTFREIWVAEH-RPNHITLVSVLPICTQIGA 455
Query: 124 WFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
Q G +H + + + V SL++ Y+K G L + +F+Q+ + T+NT++
Sbjct: 456 LRQ-GKEIHCYATRS-GLGLNISVGNSLIDMYSKCGFLELGVKVFNQMMVKNTITYNTMI 513
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
L + L + M + +PN+VT ++L+SACS+ G + +G
Sbjct: 514 SACGAH------------GLGEKGLKFYEQMNEAGMKPNKVTFISLLSACSHAGLVDRGW 561
Query: 244 WTHCYLLRN-NLKLNRFVGTALVDMYSKCGCLNLA 277
+ ++ + +K + + +VD+ + G L+ A
Sbjct: 562 LLYNSMVNDYGIKPDMEHYSCMVDLIGRTGDLDGA 596
>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48578894 | 20130731
Length = 993
Score = 112 bits (280), Expect = 4e-25, Method: Composition-based stats.
Identities = 86/290 (29%), Positives = 143/290 (49%), Gaps = 21/290 (7%)
Query: 12 ILKLLQKCHSLNTL----KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSI 66
I +L+ C SL +QVH L G+ L ++ + L+ + SK A +F +
Sbjct: 401 ITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQ 460
Query: 67 PNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQ 126
+ +N ++ FT S A L++ ++ + + + TF + KA G Q
Sbjct: 461 DGFDLASWNAMMHGFTV-SDNYREALRLFS-LMHERGEKADQITFANAAKAA-GCLVRLQ 517
Query: 127 YGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXX 186
G +HA V+K + YD FV + +L+ Y K G + +R +F+QI PD W T++
Sbjct: 518 QGKQIHAVVIK-MRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGC 576
Query: 187 XXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTH 246
+E+ + +AL+ + M+++ +P+E T L+ ACS L AL QG H
Sbjct: 577 -----------VENGEEE-QALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIH 624
Query: 247 CYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+++ N + FV T+LVDMY+KCG + A LF ++ R +NAMI
Sbjct: 625 ANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMI 674
Score = 80.9 bits (198), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 17/216 (7%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPTVFLYNTLISSFTSH 84
KQ+HA ++ + +S +L + K A +F+ IP+P + T+IS +
Sbjct: 520 KQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVEN 579
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
+ F+ + LA +QP+ +TF +L KAC + G +HA+++K L +D
Sbjct: 580 GEEEQALFTYHQMRLA--GVQPDEYTFATLVKACSLLTA-LEQGKQIHANIMK-LNCAFD 635
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
FV SL++ YAK G + + LF +++ +A WN ++ L +
Sbjct: 636 PFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVG------------LAQHGNA 683
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALS 240
EAL F +M+ P+ VT + ++SACS+ G S
Sbjct: 684 EEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTS 719
Score = 77.4 bits (189), Expect = 1e-14, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 23/243 (9%)
Query: 58 YALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQP-NSFTFPSLFK 116
YA +F + V ++N +SS+ + I K+ P +S T+ +
Sbjct: 249 YATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMI---KSRVPCDSLTYIVILS 305
Query: 117 ACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQA--SLLNFYAKYGRLCVSRCLFDQISEP 174
H + G +H V++F +D FV S +N Y K G + +R +F Q+ E
Sbjct: 306 VVASLNH-LELGKQIHGAVVRF---GWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEV 361
Query: 175 DLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACS 234
DL +WNT++ LE+ +L LF D+ S P++ T+ +++ ACS
Sbjct: 362 DLISWNTVI-------SGCARSGLEEC-----SLRLFIDLLRSGLLPDQFTITSVLRACS 409
Query: 235 NL-GALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYN 293
+L + G H L+ + L+ FV TAL+D+YSK G + A LF D +N
Sbjct: 410 SLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWN 469
Query: 294 AMI 296
AM+
Sbjct: 470 AMM 472
Score = 67.0 bits (162), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 23/172 (13%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT--VFLYNTLISSFT 82
K+ HA ++T+GL Y ++L+T+ +K S + A +F P + YN +++++
Sbjct: 33 KRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY- 91
Query: 83 SHSSQIH------LAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP-----L 131
+H+ ++H AF ++ R+L + T LFK C YG P L
Sbjct: 92 AHTGELHDVEKTHEAFHIF-RLLRQSVMLTTRHTLSPLFKLC------LLYGSPSASEAL 144
Query: 132 HAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
+ +K + +D FV +L+N YAK+ R+ +R LFD++ D+ WN ++
Sbjct: 145 QGYAVK-IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMM 195
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQI--SEPDLATWNTLLXXXXXXXXXXXXXXLEDA 201
D +V +L+ YAK G L +R LFD S+ DL T+N +L L D
Sbjct: 47 DRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGE------LHDV 100
Query: 202 DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG 261
+ + EA ++F ++ S TL L C G+ S Y ++ L+ + FV
Sbjct: 101 EKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVA 160
Query: 262 TALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
ALV++Y+K + A LFD++ RD +N M+
Sbjct: 161 GALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMM 195
>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 112 bits (280), Expect = 5e-25, Method: Composition-based stats.
Identities = 86/290 (29%), Positives = 143/290 (49%), Gaps = 21/290 (7%)
Query: 12 ILKLLQKCHSLNTL----KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSI 66
I +L+ C SL +QVH L G+ L ++ + L+ + SK A +F +
Sbjct: 401 ITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQ 460
Query: 67 PNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQ 126
+ +N ++ FT S A L++ ++ + + + TF + KA G Q
Sbjct: 461 DGFDLASWNAMMHGFTV-SDNYREALRLFS-LMHERGEKADQITFANAAKAA-GCLVRLQ 517
Query: 127 YGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXX 186
G +HA V+K + YD FV + +L+ Y K G + +R +F+QI PD W T++
Sbjct: 518 QGKQIHAVVIK-MRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGC 576
Query: 187 XXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTH 246
+E+ + +AL+ + M+++ +P+E T L+ ACS L AL QG H
Sbjct: 577 -----------VENGEEE-QALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIH 624
Query: 247 CYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+++ N + FV T+LVDMY+KCG + A LF ++ R +NAMI
Sbjct: 625 ANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMI 674
Score = 80.9 bits (198), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 17/216 (7%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPTVFLYNTLISSFTSH 84
KQ+HA ++ + +S +L + K A +F+ IP+P + T+IS +
Sbjct: 520 KQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVEN 579
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
+ F+ + LA +QP+ +TF +L KAC + G +HA+++K L +D
Sbjct: 580 GEEEQALFTYHQMRLA--GVQPDEYTFATLVKACSLLTA-LEQGKQIHANIMK-LNCAFD 635
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
FV SL++ YAK G + + LF +++ +A WN ++ L +
Sbjct: 636 PFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVG------------LAQHGNA 683
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALS 240
EAL F +M+ P+ VT + ++SACS+ G S
Sbjct: 684 EEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTS 719
Score = 77.4 bits (189), Expect = 1e-14, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 23/243 (9%)
Query: 58 YALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQP-NSFTFPSLFK 116
YA +F + V ++N +SS+ + I K+ P +S T+ +
Sbjct: 249 YATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMI---KSRVPCDSLTYIVILS 305
Query: 117 ACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQA--SLLNFYAKYGRLCVSRCLFDQISEP 174
H + G +H V++F +D FV S +N Y K G + +R +F Q+ E
Sbjct: 306 VVASLNH-LELGKQIHGAVVRF---GWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEV 361
Query: 175 DLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACS 234
DL +WNT++ LE+ +L LF D+ S P++ T+ +++ ACS
Sbjct: 362 DLISWNTVI-------SGCARSGLEEC-----SLRLFIDLLRSGLLPDQFTITSVLRACS 409
Query: 235 NL-GALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYN 293
+L + G H L+ + L+ FV TAL+D+YSK G + A LF D +N
Sbjct: 410 SLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWN 469
Query: 294 AMI 296
AM+
Sbjct: 470 AMM 472
Score = 67.0 bits (162), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 23/172 (13%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT--VFLYNTLISSFT 82
K+ HA ++T+GL Y ++L+T+ +K S + A +F P + YN +++++
Sbjct: 33 KRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY- 91
Query: 83 SHSSQIH------LAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP-----L 131
+H+ ++H AF ++ R+L + T LFK C YG P L
Sbjct: 92 AHTGELHDVEKTHEAFHIF-RLLRQSVMLTTRHTLSPLFKLC------LLYGSPSASEAL 144
Query: 132 HAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
+ +K + +D FV +L+N YAK+ R+ +R LFD++ D+ WN ++
Sbjct: 145 QGYAVK-IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMM 195
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQI--SEPDLATWNTLLXXXXXXXXXXXXXXLEDA 201
D +V +L+ YAK G L +R LFD S+ DL T+N +L L D
Sbjct: 47 DRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGE------LHDV 100
Query: 202 DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG 261
+ + EA ++F ++ S TL L C G+ S Y ++ L+ + FV
Sbjct: 101 EKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVA 160
Query: 262 TALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
ALV++Y+K + A LFD++ RD +N M+
Sbjct: 161 GALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMM 195
>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 112 bits (280), Expect = 5e-25, Method: Composition-based stats.
Identities = 86/290 (29%), Positives = 143/290 (49%), Gaps = 21/290 (7%)
Query: 12 ILKLLQKCHSLNTL----KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSI 66
I +L+ C SL +QVH L G+ L ++ + L+ + SK A +F +
Sbjct: 401 ITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQ 460
Query: 67 PNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQ 126
+ +N ++ FT S A L++ ++ + + + TF + KA G Q
Sbjct: 461 DGFDLASWNAMMHGFTV-SDNYREALRLFS-LMHERGEKADQITFANAAKAA-GCLVRLQ 517
Query: 127 YGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXX 186
G +HA V+K + YD FV + +L+ Y K G + +R +F+QI PD W T++
Sbjct: 518 QGKQIHAVVIK-MRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGC 576
Query: 187 XXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTH 246
+E+ + +AL+ + M+++ +P+E T L+ ACS L AL QG H
Sbjct: 577 -----------VENGEEE-QALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIH 624
Query: 247 CYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+++ N + FV T+LVDMY+KCG + A LF ++ R +NAMI
Sbjct: 625 ANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMI 674
Score = 80.9 bits (198), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 17/216 (7%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPTVFLYNTLISSFTSH 84
KQ+HA ++ + +S +L + K A +F+ IP+P + T+IS +
Sbjct: 520 KQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVEN 579
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
+ F+ + LA +QP+ +TF +L KAC + G +HA+++K L +D
Sbjct: 580 GEEEQALFTYHQMRLA--GVQPDEYTFATLVKACSLLTA-LEQGKQIHANIMK-LNCAFD 635
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
FV SL++ YAK G + + LF +++ +A WN ++ L +
Sbjct: 636 PFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVG------------LAQHGNA 683
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALS 240
EAL F +M+ P+ VT + ++SACS+ G S
Sbjct: 684 EEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTS 719
Score = 77.4 bits (189), Expect = 1e-14, Method: Composition-based stats.
Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 23/243 (9%)
Query: 58 YALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQP-NSFTFPSLFK 116
YA +F + V ++N +SS+ + I K+ P +S T+ +
Sbjct: 249 YATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMI---KSRVPCDSLTYIVILS 305
Query: 117 ACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQA--SLLNFYAKYGRLCVSRCLFDQISEP 174
H + G +H V++F +D FV S +N Y K G + +R +F Q+ E
Sbjct: 306 VVASLNH-LELGKQIHGAVVRF---GWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEV 361
Query: 175 DLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACS 234
DL +WNT++ LE+ +L LF D+ S P++ T+ +++ ACS
Sbjct: 362 DLISWNTVI-------SGCARSGLEEC-----SLRLFIDLLRSGLLPDQFTITSVLRACS 409
Query: 235 NL-GALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYN 293
+L + G H L+ + L+ FV TAL+D+YSK G + A LF D +N
Sbjct: 410 SLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWN 469
Query: 294 AMI 296
AM+
Sbjct: 470 AMM 472
Score = 67.0 bits (162), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 23/172 (13%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT--VFLYNTLISSFT 82
K+ HA ++T+GL Y ++L+T+ +K S + A +F P + YN +++++
Sbjct: 33 KRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY- 91
Query: 83 SHSSQIH------LAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP-----L 131
+H+ ++H AF ++ R+L + T LFK C YG P L
Sbjct: 92 AHTGELHDVEKTHEAFHIF-RLLRQSVMLTTRHTLSPLFKLC------LLYGSPSASEAL 144
Query: 132 HAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
+ +K + +D FV +L+N YAK+ R+ +R LFD++ D+ WN ++
Sbjct: 145 QGYAVK-IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMM 195
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQI--SEPDLATWNTLLXXXXXXXXXXXXXXLEDA 201
D +V +L+ YAK G L +R LFD S+ DL T+N +L L D
Sbjct: 47 DRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGE------LHDV 100
Query: 202 DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG 261
+ + EA ++F ++ S TL L C G+ S Y ++ L+ + FV
Sbjct: 101 EKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVA 160
Query: 262 TALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
ALV++Y+K + A LFD++ RD +N M+
Sbjct: 161 GALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMM 195
>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3128021-3130773 | 20130731
Length = 810
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 28/276 (10%)
Query: 33 LTTGLALHTYCL----SHLLTISSKLASTY--------ALTIFSSIPNPTVFLYNTLISS 80
L G ++H Y + ++ +S+ L Y +F + + V +NT+I
Sbjct: 252 LRIGRSVHGYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMSSKNVVSWNTVIDG 311
Query: 81 FTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLE 140
+ + + AF+ + ++ K ++P + + AC G + G +H +L ++
Sbjct: 312 L-AQNGESEEAFATFLKMFEEK-VEPTNVSMMGALHACSNLGD-LERGKFVH-RLLDQMK 367
Query: 141 PPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLED 200
+ V SL++ Y+K R+ ++ +FD + TWN ++
Sbjct: 368 LSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTNVTWNAMILGYAQNGCVN------- 420
Query: 201 ADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFV 260
EAL LFC MQ +P+ T V++I+A ++L Q W H +R N+ N FV
Sbjct: 421 -----EALNLFCTMQSQGIKPDSFTFVSVITALADLSVTRQAKWIHGLAIRTNMDTNVFV 475
Query: 261 GTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
TALVDMY+KCG + A +LFD + +R +NAMI
Sbjct: 476 ATALVDMYAKCGAIETARELFDMMQERHVITWNAMI 511
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 134/292 (45%), Gaps = 19/292 (6%)
Query: 7 IFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSS 65
I+ HP LL+ S++ L Q+ ++ G + L+++ K + AL +F S
Sbjct: 35 IYRHPSSILLELTTSISELHQILPHIIKNGFYNQHLFQTKLISLFCKFGTINEALRVFDS 94
Query: 66 IPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWF 125
+ LY+TL+ + +SS + + + ++P + F L + CG
Sbjct: 95 VETKLDVLYHTLLKGYVKNSSLSESLSFF--KRMQNDEVEPVVYDFTYLLQ-LCGENFDL 151
Query: 126 QYGPPLHAHVLK-FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLX 184
+ G +H ++K E + F S++N YAK ++ + +F ++ E DL WNT++
Sbjct: 152 KKGMEVHGMLIKNGFES--NLFAMTSVVNLYAKCRKIDDAYKMFVRMPERDLVCWNTVVA 209
Query: 185 XXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVW 244
+ +AL L DMQ ++ + +TLV+++ A +++ L G
Sbjct: 210 GYAQN------------GFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKGLRIGRS 257
Query: 245 THCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H Y +R V TAL+DMY KCG + +F +++ ++ +N +I
Sbjct: 258 VHGYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMSSKNVVSWNTVI 309
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 136/288 (47%), Gaps = 34/288 (11%)
Query: 9 NHPILKLLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFS 64
N ++ L C +L L++ VH + L+ + ++ L+++ SK A ++F
Sbjct: 337 NVSMMGALHACSNLGDLERGKFVHRLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASVFD 396
Query: 65 SIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCG---- 120
++ T +N +I + + ++ A +L+ + + ++P+SFTF S+ A
Sbjct: 397 NLEGKTNVTWNAMILGYAQNGC-VNEALNLFC-TMQSQGIKPDSFTFVSVITALADLSVT 454
Query: 121 -SGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATW 179
W +G + ++ + FV +L++ YAK G + +R LFD + E + TW
Sbjct: 455 RQAKWI-HGLAIRTNM------DTNVFVATALVDMYAKCGAIETARELFDMMQERHVITW 507
Query: 180 NTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQ-MSRRRPNEVTLVALISACSNLGA 238
N ++ L AL LF DMQ + +PN++T +++ISACS+ G
Sbjct: 508 NAMIDGYGTH------------GLGKAALDLFDDMQNEASLKPNDITFLSVISACSHSGF 555
Query: 239 LSQGVWTHCYLLRNNLKLNRFVG--TALVDMYSKCGCLNLACQLFDQL 284
+ +G++ + +++ L + A+VD+ + G L+ A + ++
Sbjct: 556 VEEGLY-YFKIMKEGYGLEPSMDHYGAMVDLLGRAGKLDDAWKFIHEM 602
>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
20130731
Length = 719
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 143/286 (50%), Gaps = 22/286 (7%)
Query: 15 LLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPTVFL 73
L+ + L QVH Q++ +GL + + ++ L+ SS L YA +F P+P +F+
Sbjct: 53 LIDNSTHITHLYQVHNQLVLSGLQHNRFLMTKLVNQSSNLGQIFYARKLFDEFPDPDLFM 112
Query: 74 YNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP--L 131
+N +I ++ S ++ +Y R + L P+ FTFP + KAC +G +
Sbjct: 113 WNAIIRTY-SRNNMYRNVIEMY-RWMKWVGLHPDKFTFPCVLKAC---SELLDFGLSCLV 167
Query: 132 HAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXX 191
HAHV+ + + FVQ L+ YAK GR+ ++R +FD++ + + +W ++
Sbjct: 168 HAHVIVYGFGSHV-FVQNGLVALYAKCGRIGMARMVFDRLYDRTIVSWTAIVSGYGQNGE 226
Query: 192 XXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLR 251
EAL +F M+ + +P+ ++LV+++ A +++ L QG H +++
Sbjct: 227 ------------PWEALRMFDQMRKTDVKPDWISLVSVMRAYTDVDDLEQGRSLHGCIIK 274
Query: 252 NNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL-TDRDTFCYNAMI 296
L+ + +L Y+KCG + +A FD++ T +NAMI
Sbjct: 275 MGLEEEPDLLISLTAFYAKCGEVTVAKSFFDKMKTPNKVMMWNAMI 320
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 129/272 (47%), Gaps = 20/272 (7%)
Query: 28 VHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPTVFLYNTLISSFTSHSS 86
VHA ++ G H + + L+ + +K A +F + + T+ + ++S + +
Sbjct: 167 VHAHVIVYGFGSHVFVQNGLVALYAKCGRIGMARMVFDRLYDRTIVSWTAIVSGYGQNGE 226
Query: 87 QIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKF-LEPPYDH 145
A ++++ + ++P+ + S+ +A + G LH ++K LE D
Sbjct: 227 PWE-ALRMFDQ-MRKTDVKPDWISLVSVMRAYTDVDD-LEQGRSLHGCIIKMGLEEEPDL 283
Query: 146 FVQASLLNFYAKYGRLCVSRCLFDQISEPD-LATWNTLLXXXXXXXXXXXXXXLEDADLS 204
+ SL FYAK G + V++ FD++ P+ + WN ++ +
Sbjct: 284 LI--SLTAFYAKCGEVTVAKSFFDKMKTPNKVMMWNAMISGYAKNGH------------A 329
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTAL 264
EA+ LF M +P+ +TL + + AC+ +G+L W Y+ ++ + FV T L
Sbjct: 330 EEAVELFQAMISRNIKPDSITLRSAVLACAQVGSLKLAQWMDDYVRKSKYGGDIFVNTTL 389
Query: 265 VDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+DMY+KCG + A +FD+ + +D ++AMI
Sbjct: 390 IDMYAKCGSVESARLVFDRASVKDVVMWSAMI 421
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 119/269 (44%), Gaps = 20/269 (7%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
+++ L + +H ++ GL L L +K T A + F + P
Sbjct: 252 VMRAYTDVDDLEQGRSLHGCIIKMGLEEEPDLLISLTAFYAKCGEVTVAKSFFDKMKTPN 311
Query: 71 -VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGP 129
V ++N +IS + + A L+ +++ + ++P+S T S AC G +
Sbjct: 312 KVMMWNAMISGYAK-NGHAEEAVELFQAMIS-RNIKPDSITLRSAVLACAQVGS-LKLAQ 368
Query: 130 PLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXX 189
+ +V K + D FV +L++ YAK G + +R +FD+ S D+ W+ ++
Sbjct: 369 WMDDYVRKS-KYGGDIFVNTTLIDMYAKCGSVESARLVFDRASVKDVVMWSAMIMGYGLH 427
Query: 190 XXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYL 249
EA+YL+ M+ PN+VT + L++ACS+ G + QG W +
Sbjct: 428 GQ------------GWEAIYLYHAMKQEGVCPNDVTFIGLLTACSHSGLIKQG-WELFHC 474
Query: 250 LRN-NLKLNRFVGTALVDMYSKCGCLNLA 277
+R+ +K + +VD+ + G L A
Sbjct: 475 MRDFGIKPRNEHYSCVVDLLGRAGYLKQA 503
>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35708903-35705786 | 20130731
Length = 616
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 138/303 (45%), Gaps = 32/303 (10%)
Query: 19 CHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKL----ASTYALTIFSSIPNPTVFLY 74
C +LN KQ+HA + L +Y +++LL + L TY +FS + +P FLY
Sbjct: 21 CTTLNHAKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLY 80
Query: 75 NTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAH 134
+ LI ++ + + H + LY +L + + P SFTF +LF Q LHA
Sbjct: 81 SALIRAY-ARNGPFHHSIRLYTSML-NNNVSPVSFTFSALFSLLKNPSLGSQL--HLHAF 136
Query: 135 VLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXX 194
+ F+ D +V ++++ Y K+G L +R +FD++ D+ TW L+
Sbjct: 137 LFGFVN---DLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDS 193
Query: 195 XXXL-------------------EDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSN 235
L + +AL F M+ + +E+TLV ISAC+
Sbjct: 194 ACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQ 253
Query: 236 LGALSQGVWTH--CYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYN 293
LG W R N FVG+AL+DMYSKCG + A +F + + + F Y+
Sbjct: 254 LGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYS 313
Query: 294 AMI 296
+MI
Sbjct: 314 SMI 316
>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:13515619-13513589 | 20130731
Length = 676
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 17/265 (6%)
Query: 21 SLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLIS 79
SL TLK +H +L +G +L ++ L+ K + T A +F +PN + +N++IS
Sbjct: 16 SLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMIS 74
Query: 80 SFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFL 139
S S + A LY+ +L L P+++TF ++FKA G + G H +
Sbjct: 75 SHVSR-GKTKEAIELYDNMLFEGVL-PDAYTFSAIFKAFSEMG-VSREGQKAHGLAVVLG 131
Query: 140 EPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLE 199
D FV +++ YAK+G++ +R +FD++ + D+ + L+
Sbjct: 132 FEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGY------------N 179
Query: 200 DADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRF 259
L EAL +F DM SR +PNE TL +++ +C NLG L G H ++++ L+
Sbjct: 180 QRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVA 239
Query: 260 VGTALVDMYSKCGCLNLACQLFDQL 284
T+L+ MYSKC + + ++F+ L
Sbjct: 240 SQTSLLTMYSKCNMVEDSIKVFNSL 264
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 136/288 (47%), Gaps = 23/288 (7%)
Query: 15 LLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
+L C +L L K +H ++ +GL + LLT+ SK ++ +F+S+ +
Sbjct: 209 VLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYAS 268
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+ + I + + +A S++ R + ++ PN FTF S+ AC S + G
Sbjct: 269 HVTWTSFIVGLVQNGRE-EIALSMF-REMIRCSISPNHFTFSSILHACS-SLAMLEAGEQ 325
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+HA +K L + +V A+L++ Y K G + +R +F+ ++E D+ + NT++
Sbjct: 326 IHAVTVK-LGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQN- 383
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
EAL LF M+ +PN VT ++++ AC+N G + +G L+
Sbjct: 384 -----------GFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFS-LI 431
Query: 251 RNN--LKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
RNN ++L R T ++D+ + A L ++ + D + ++
Sbjct: 432 RNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLL 479
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 18/236 (7%)
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS 121
+F + + V L+ LI + A ++ ++ + ++PN +T S+ +C
Sbjct: 159 VFDRVLDKDVVLFTALIVGYNQRGLDGE-ALEVFEDMVGSR-IKPNEYTLASVLVSCGNL 216
Query: 122 GHWFQYGPPLHAHVLK-FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWN 180
G G +H V+K LE Q SLL Y+K + S +F+ ++ TW
Sbjct: 217 GDLVN-GKLIHGLVVKSGLESVVAS--QTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWT 273
Query: 181 TLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALS 240
+ + AL +F +M PN T +++ ACS+L L
Sbjct: 274 SFIVGLVQNGREEI------------ALSMFREMIRCSISPNHFTFSSILHACSSLAMLE 321
Query: 241 QGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G H ++ + N++V AL+ +Y KCG + A +F+ LT+ D N MI
Sbjct: 322 AGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMI 377
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 15/169 (8%)
Query: 129 PPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXX 188
LH H+LK F L++ Y K + +R LFD++ + TWN+++
Sbjct: 21 KSLHTHILK--SGSLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVS 78
Query: 189 XXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCY 248
+ EA+ L+ +M P+ T A+ A S +G +G H
Sbjct: 79 RGK------------TKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGL 126
Query: 249 LLRNNLKL-NRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ ++ + FV T +VDMY+K G + A +FD++ D+D + A+I
Sbjct: 127 AVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALI 175
>Medtr2g024080.1 | PPR containing plant-like protein | HC |
chr2:8563899-8566215 | 20130731
Length = 767
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 17/272 (6%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSH 84
+ VH Q+L G L + + + + K + A +F + V L+ +IS +
Sbjct: 288 RLVHGQILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFERSLDKDVVLWTAMISGLVQN 347
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
+ A ++++++ ++P++ T S+ AC G F G +H ++L+ + D
Sbjct: 348 ENA-DKALAVFDQMFKFG-MKPSTETMASVITACAQLGA-FNLGKSIHGYILR-QKLSLD 403
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
SL+ YAK G L S +FD++S+ DL +WN ++
Sbjct: 404 TAAHNSLVTMYAKCGHLDQSYIVFDRMSKRDLVSWNAIVAGYAQNGCVY----------- 452
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTAL 264
+A LF +M+ + P+ +T+V+L+ C++ G L G W H +++RN L+ V T+L
Sbjct: 453 -KAFSLFNEMRSCHQTPDSITIVSLVQGCASTGQLHPGKWIHGFVIRNGLRPCILVDTSL 511
Query: 265 VDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
VDMY KCG L+ A + F+ + +D ++A+I
Sbjct: 512 VDMYCKCGDLDSAQRCFNLMPSQDLVSWSAII 543
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 127/286 (44%), Gaps = 23/286 (8%)
Query: 15 LLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFSSIPNPT 70
LL+ C LN +H +++ GL+ +Y S L+ K + A +F +P
Sbjct: 75 LLKACSFLNLFHLGNSLHQRVIVNGLSTDSYIASSLINFYVKFGYNDVARKVFDFMPERN 134
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
V + T+I + S + AFSL+ R + ++ +QP+S T SL Y
Sbjct: 135 VVPWTTVIGCY-SKMGDVREAFSLF-RQMRYEGIQPSSVTLLSLLFGVSE----VPYVQC 188
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
LH + F D + S++N Y K G + R LF+ + D+ +WN+LL
Sbjct: 189 LHGCAI-FYGFMSDLNLLNSMVNLYGKCGSIEDCRKLFEFMDRRDVVSWNSLLSAYA--- 244
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
+ DL E L L M++ P +++S + G + G H +L
Sbjct: 245 --------QIGDLC-EVLLLLKRMKLQGLEPGLQAFGSVLSVAVSTGDMRLGRLVHGQIL 295
Query: 251 RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
R L+ + T+ + MY K G +N+A ++F++ D+D + AMI
Sbjct: 296 RGGFVLDAHIETSFIVMYLKGGNINVAFKMFERSLDKDVVLWTAMI 341
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 38/243 (15%)
Query: 66 IPNP-----TVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCG 120
+P+P T YN LI+ ++ + + + Y +L + + +++TFPSL KAC
Sbjct: 24 LPHPPSSSATTHSYNALINRHSTQGAHRQVLIT-YTSML-NANIPSDAYTFPSLLKACSF 81
Query: 121 SGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWN 180
+ F G LH V+ D ++ +SL+NFY K+G V+R +FD + E ++ W
Sbjct: 82 L-NLFHLGNSLHQRVI-VNGLSTDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPWT 139
Query: 181 TLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALS 240
T++ D+ EA LF M+ +P+ VTL++L L +S
Sbjct: 140 TVIGCYSKM-----------GDVR-EAFSLFRQMRYEGIQPSSVTLLSL------LFGVS 181
Query: 241 QGVWTHC-------YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYN 293
+ + C Y ++L L ++V++Y KCG + +LF+ + RD +N
Sbjct: 182 EVPYVQCLHGCAIFYGFMSDLNLL----NSMVNLYGKCGSIEDCRKLFEFMDRRDVVSWN 237
Query: 294 AMI 296
+++
Sbjct: 238 SLL 240
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 125/270 (46%), Gaps = 26/270 (9%)
Query: 21 SLNTLKQVHAQMLTTGLALHTYCLSHLLTISSK---LASTYALTIFSSIPNPTVFLYNTL 77
+ N K +H +L L+L T + L+T+ +K L +Y +F + + +N +
Sbjct: 384 AFNLGKSIHGYILRQKLSLDTAAHNSLVTMYAKCGHLDQSY--IVFDRMSKRDLVSWNAI 441
Query: 78 ISSFTSHSSQIHLAFSLYNRILA-HKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVL 136
++ + + ++ AFSL+N + + H+T P+S T SL + C +G G +H V+
Sbjct: 442 VAGYAQNGC-VYKAFSLFNEMRSCHQT--PDSITIVSLVQGCASTGQ-LHPGKWIHGFVI 497
Query: 137 K-FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXX 195
+ L P V SL++ Y K G L ++ F+ + DL +W+ ++
Sbjct: 498 RNGLRPCI--LVDTSLVDMYCKCGDLDSAQRCFNLMPSQDLVSWSAIIAGYGYHGKGET- 554
Query: 196 XXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRN-NL 254
AL L+ +R +PN V ++++S+CS+ G + QG+ + + R+
Sbjct: 555 -----------ALRLYSKFLETRIKPNHVIFLSILSSCSHNGLIDQGLNIYESMTRDFGF 603
Query: 255 KLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
N +VD+ + G + A L+ ++
Sbjct: 604 VPNLEHHACMVDLLCRAGKVEEAYNLYKRM 633
>Medtr8g068150.1 | SLOW growth protein, putative | HC |
chr8:28404022-28408146 | 20130731
Length = 633
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 148/331 (44%), Gaps = 60/331 (18%)
Query: 9 NHPILKLLQKCHSLNTLKQVHAQMLTTG----LALHTYCLSHLLTISSKLASTYALTIFS 64
N I LL C ++ Q++A ++ TG L L T + + SS + ++ T+F+
Sbjct: 14 NERIKSLLSSCKTMQQAHQIYAHIIVTGRHNNLHLSTTLFTFYASSSSSQSLHHSHTLFT 73
Query: 65 SIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS-GH 123
I NP +FL+N +I +++ S FSL+ +L L P+SFTFP L KAC
Sbjct: 74 QITNPDIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVL-PDSFTFPFLLKACANVLIS 132
Query: 124 WFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
Q+G +H HVL+ D FV +LLNFY +G + + +FD+ D ++NT++
Sbjct: 133 APQFGFQVHCHVLRN-GFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMI 191
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
D+S +F +M+ RP+E T VAL+S CS L G
Sbjct: 192 NGFA-----------RKGDVS-GCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGR 239
Query: 244 WTHCYLLRNNLKLNRFVGTA-----LVDMYSKCGCL------------------------ 274
H + R +L F G LVDMY+KCG L
Sbjct: 240 QVHGLVYR---ELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLV 296
Query: 275 ---------NLACQLFDQLTDRDTFCYNAMI 296
+A +LFDQ+ +RD + AMI
Sbjct: 297 SAYALRGEVKVARRLFDQMGERDVVSWTAMI 327
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 131/308 (42%), Gaps = 52/308 (16%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSHS 85
QVH +L G + + LL A +F +NT+I+ F +
Sbjct: 139 QVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGF-ARK 197
Query: 86 SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC---------------------CGSGH- 123
+ F ++ + ++P+ +TF +L C C G+
Sbjct: 198 GDVSGCFRVFGEMRG-VCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNV 256
Query: 124 ---------WFQYGPPLHAHVLKFLEPPYDHFVQA--SLLNFYAKYGRLCVSRCLFDQIS 172
+ + G + A + + P V A SL++ YA G + V+R LFDQ+
Sbjct: 257 LLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMG 316
Query: 173 EPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISA 232
E D+ +W ++ A EAL LF ++ +P+EV +VA +SA
Sbjct: 317 ERDVVSWTAMISGY------------SHAGCFQEALELFVKLEGLGMKPDEVAVVAALSA 364
Query: 233 CSNLGALSQGVWTHCYLLRNNL--KLNRFVGTALVDMYSKCGCLNLACQLFDQLTD--RD 288
C+ LGAL G H N +NR +A+VDMY+KCG +++A +F + +D +
Sbjct: 365 CARLGALELGRRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKT 424
Query: 289 TFCYNAMI 296
TF YN++I
Sbjct: 425 TFLYNSII 432
>Medtr5g043450.1 | PPR containing plant-like protein | HC |
chr5:19108134-19105482 | 20130731
Length = 828
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 145/293 (49%), Gaps = 28/293 (9%)
Query: 12 ILKLLQKCHSLNTLKQ---VHA-----QMLTTGLALHTYCLSHLLTISSKLASTYALTIF 63
++ +L C L LK+ VH M TGL L L + K++S L
Sbjct: 307 MISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGP-ALIDFYSACWKMSSCEKL--L 363
Query: 64 SSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
SI N + +NTLIS F + A + + ++A K + P+SF+ S A SG
Sbjct: 364 HSIGNENIVSWNTLIS-FYAREGLNDEAMAFFACMVA-KGIMPDSFSLASSISASASSGS 421
Query: 124 WFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
Q+G +H HV+K +D FVQ SL++ Y+K G + +F++I + WN ++
Sbjct: 422 -IQFGQQIHGHVMK--RGFFDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMI 478
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
+S+EAL LF +M +R N+VT ++ I ACSNLG L +G
Sbjct: 479 CG------------FSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGK 526
Query: 244 WTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
W H ++ + + ++ TALVDMY+KCG L A ++FD + ++ ++ MI
Sbjct: 527 WIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMI 579
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 36/296 (12%)
Query: 13 LKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTV 71
+ L + C +L L Q+HA ++ T L + + LL S++ S + +F + P+P
Sbjct: 5 MPLFRTCSTLRRLTQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDS 64
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRIL---------AHKTLQPNSFTFPSLFKACCGSG 122
F+++ LI + HL L+ +L K Q +F +PS+ +A G G
Sbjct: 65 FMFSVLI--------KCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVG 116
Query: 123 HWFQYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWN 180
G LH +LK F E D + SL+ Y + L ++ +FD++ DL W+
Sbjct: 117 ELI-VGRKLHGRILKSGFCE---DRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWS 172
Query: 181 TLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALS 240
+++ + + E L +F M RP+ V L+++ AC +G L
Sbjct: 173 SIISCYV------------ENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLR 220
Query: 241 QGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H Y++R + + + +L+ MYS+CG L A +LF+ + DR T C+ +MI
Sbjct: 221 LAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMI 276
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 142/296 (47%), Gaps = 19/296 (6%)
Query: 4 QNPIFNHP-ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALT 61
QN F +P +++ + L +++H ++L +G + L+ + +L A
Sbjct: 99 QNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKK 158
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS 121
+F + + L++++IS + + ++ ++ + ++P+S S+ +AC G
Sbjct: 159 VFDEMCVRDLVLWSSIISCYVENGV-YREGLEMFRSMIC-EGIRPDSVMLLSVAEAC-GK 215
Query: 122 GHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
+ +H +V++ D + SL+ Y++ G LC ++ LF+ I + + W +
Sbjct: 216 IGCLRLAKSVHGYVMR-EGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTS 274
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
++ + EAL +F MQ S PN+VT+++++++C+ LG L +
Sbjct: 275 MISAY------------NQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKE 322
Query: 242 GVWTHCYLLRNNLKLNRF-VGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G HC++LRN + + +G AL+D YS C ++ +L + + + +N +I
Sbjct: 323 GKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLI 378
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 128/262 (48%), Gaps = 21/262 (8%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFSSIPNPTVFLYNTLISSFTSH 84
+Q+H ++ G + + L+ + SK ++ A TIF+ I + ++ +N +I F+ +
Sbjct: 426 QQIHGHVMKRGF-FDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQN 484
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
+ A SL++ + ++ L+ N TF S +AC G + G +H H + D
Sbjct: 485 GISVE-ALSLFDEMFKNR-LEINKVTFLSAIQACSNLG-YLDKGKWIH-HKIIVTGNQND 540
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
++ +L++ YAK G L ++ +FD I E + +W+T++
Sbjct: 541 LYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINA---------- 590
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG--T 262
A LF M +S +PNEVT + ++SAC + G++ +G + + +R+ + V
Sbjct: 591 --ATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKF-YFNTMRDYYGIVPNVEHFA 647
Query: 263 ALVDMYSKCGCLNLACQLFDQL 284
++VD+ S+ G +N A ++ +
Sbjct: 648 SIVDLLSRAGDINGAYEIIKSI 669
>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45554142-45556499 | 20130731
Length = 785
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 118/241 (48%), Gaps = 18/241 (7%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F IP P+V L+N +I ++ + S + LY +L + P +FTFP L KAC
Sbjct: 60 ARHVFDQIPKPSVVLWNMMIRTY-AWSGPFQQSIYLYLHML-QLGVTPTNFTFPFLLKAC 117
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQIS--EPDL 176
S Q G +H H L D +V +LL+ YAK G L ++ LF+ IS + D+
Sbjct: 118 -SSLQALQLGRLIHTHA-HILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDI 175
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
WN ++ L + ++ MQ + PN TLV+++
Sbjct: 176 VAWNAMIAAFSFHA------------LHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQA 223
Query: 237 GALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
AL QG H Y +RN N + TAL+DMY+KC L A ++F+ + ++ C++AMI
Sbjct: 224 NALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMI 283
Query: 297 G 297
G
Sbjct: 284 G 284
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 138/289 (47%), Gaps = 23/289 (7%)
Query: 15 LLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIP--N 68
LL+ C SL L + +H GL++ Y + LL + +K Y A T+F+SI +
Sbjct: 113 LLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQD 172
Query: 69 PTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYG 128
+ +N +I++F+ H+ S+ + + PNS T S+ G + G
Sbjct: 173 RDIVAWNAMIAAFSFHALHAQTIHSVAQ--MQQAGVTPNSSTLVSILPT-IGQANALHQG 229
Query: 129 PPLHAHVLKFLEPPYDHFV-QASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
+HA+ ++ +D+ V Q +LL+ YAK L +R +F+ +++ + W+ ++
Sbjct: 230 KAIHAYYIRNFF--FDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYV 287
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
L D L + L P TL ++ AC+ L L +G HC
Sbjct: 288 LHDSISDALALYDDMLCIYGL-----------NPTPATLATMLRACAQLTDLKRGKKLHC 336
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+++++ + L+ VG +L+ MY+KCG ++ A D++ +DT Y+A+I
Sbjct: 337 HMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAII 385
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 135/295 (45%), Gaps = 34/295 (11%)
Query: 12 ILKLLQKCHSLNTLKQVHAQ----------MLTTGLALHTYCLSHLLTISSKLASTYALT 61
IL + + ++L+ K +HA +L T L L Y HLL YA
Sbjct: 216 ILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTAL-LDMYAKCHLLF--------YARK 266
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS 121
IF+++ ++ +I + H S I A +LY+ +L L P T ++ +AC
Sbjct: 267 IFNTVNKKNDVCWSAMIGGYVLHDS-ISDALALYDDMLCIYGLNPTPATLATMLRACAQL 325
Query: 122 GHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
+ G LH H++K D V SL++ YAK G + + D++ D +++
Sbjct: 326 TD-LKRGKKLHCHMIKS-GMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSA 383
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
++ + +AL +F MQ S P T++AL+ ACS+L AL
Sbjct: 384 IISGCVQN------------GYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQH 431
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G H Y + + + A++DMYSKCG + ++ ++FD++ +RD +N MI
Sbjct: 432 GTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMI 486
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 127/277 (45%), Gaps = 39/277 (14%)
Query: 15 LLQKCHSLNTLK---QVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFSSIPNPTV 71
+L+ C L LK ++H M+ +G+ L T T+ + L S YA + N
Sbjct: 318 MLRACAQLTDLKRGKKLHCHMIKSGMDLDT-------TVGNSLISMYAKC--GIMDNAVG 368
Query: 72 FLYNTLISSFTSHSSQIHLAFS--------LYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
FL + S+S+ I L R + + P T +L AC
Sbjct: 369 FLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAA 428
Query: 124 WFQYGPPLHAH--VLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
Q+G H + V F D + ++++ Y+K G++ +SR +FD++ D+ +WNT
Sbjct: 429 -LQHGTCCHGYTVVRGFTN---DTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNT 484
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
++ L +EAL LF ++Q +P++VTL+A++SACS+ G +++
Sbjct: 485 MIIGYGIH------------GLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTE 532
Query: 242 GVWTHCYLLRN-NLKLNRFVGTALVDMYSKCGCLNLA 277
G + + +N N+K +VD+ ++ G L+ A
Sbjct: 533 GKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEA 569
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 132 HAHVLKFLEPPYDHFVQAS------LLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXX 185
H + F P+ H V S L ++ + ++R +FDQI +P + WN ++
Sbjct: 22 HRQIRSFSPHPHPHRVSDSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRT 81
Query: 186 XXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG--V 243
+++YL+ M P T L+ ACS+L AL G +
Sbjct: 82 YAWSGPFQ------------QSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLI 129
Query: 244 WTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLT--DRDTFCYNAMIG 297
TH ++L L ++ +V TAL+ MY+KCG L A LF+ ++ DRD +NAMI
Sbjct: 130 HTHAHIL--GLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIA 183
>Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38095334-38099255 | 20130731
Length = 653
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 140/274 (51%), Gaps = 22/274 (8%)
Query: 15 LLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPTVFL 73
+L+ C L LKQVH+ +L GL + S L+ SKL A+ +F + +
Sbjct: 191 VLRACERLCDLKQVHSGILKAGLESDVFVRSALIDAYSKLGELLEAVGVFREMVTGDSVV 250
Query: 74 YNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHA 133
+N++I++F HS A +LY + + + + T S+ +AC GS + G +H
Sbjct: 251 WNSIIAAFAQHSDGDE-ALALY-KSMRREGFPADQSTLTSVLRACTGSS-LLELGRQVHV 307
Query: 134 HVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXX 193
HVLKF + D + +LL+ Y K G L ++ +F +++ D+ +W+T++
Sbjct: 308 HVLKFDQ---DLILNNALLDMYCKCGSLEDAKFIFSRMAVKDVISWSTMISG-------- 356
Query: 194 XXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRN- 252
L S+EAL LF M++S RPN +T++ ++ ACS+ G +++G W + ++N
Sbjct: 357 ----LAQNGFSVEALNLFDSMKVSGPRPNYITILGVLFACSHAGLVNEG-WGYFRSMKNL 411
Query: 253 -NLKLNRFVGTALVDMYSKCGCLNLACQLFDQLT 285
+ R + L+D+ + G L+ +L ++T
Sbjct: 412 YGIDPGREHYSCLLDLLGRAGKLDEMVKLIHEMT 445
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 32/277 (11%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFT-- 82
K+VH + + G T+ ++ LL + KL A +F +P V + T+IS+++
Sbjct: 104 KRVHNHIFSNGYRPKTFLINTLLNMYVKLNLLEEAQMVFDKMPERNVVSWTTMISAYSYA 163
Query: 83 --SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKF-L 139
+ + L F + + ++ PN +TF S+ +AC Q +H+ +LK L
Sbjct: 164 KLNDRAMKLLVFMIRDGVM------PNMYTFSSVLRACERLCDLKQ----VHSGILKAGL 213
Query: 140 EPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLE 199
E D FV+++L++ Y+K G L + +F ++ D WN+++
Sbjct: 214 ES--DVFVRSALIDAYSKLGELLEAVGVFREMVTGDSVVWNSIIAAFAQHS--------- 262
Query: 200 DADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRF 259
D D EAL L+ M+ ++ TL +++ AC+ L G H ++L+ + L
Sbjct: 263 DGD---EALALYKSMRREGFPADQSTLTSVLRACTGSSLLELGRQVHVHVLKFDQDL--I 317
Query: 260 VGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ AL+DMY KCG L A +F ++ +D ++ MI
Sbjct: 318 LNNALLDMYCKCGSLEDAKFIFSRMAVKDVISWSTMI 354
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 17/199 (8%)
Query: 99 LAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKY 158
+ + + ++ + L K CC + + G +H H+ P F+ +LLN Y K
Sbjct: 75 MEKRGVFADAIAYSELIK-CCLAHKAVREGKRVHNHIFSNGYRP-KTFLINTLLNMYVKL 132
Query: 159 GRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSR 218
L ++ +FD++ E ++ +W T++ A L+ A+ L M
Sbjct: 133 NLLEEAQMVFDKMPERNVVSWTTMISAYSY------------AKLNDRAMKLLVFMIRDG 180
Query: 219 RRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLAC 278
PN T +++ AC L L Q H +L+ L+ + FV +AL+D YSK G L A
Sbjct: 181 VMPNMYTFSSVLRACERLCDLKQ---VHSGILKAGLESDVFVRSALIDAYSKLGELLEAV 237
Query: 279 QLFDQLTDRDTFCYNAMIG 297
+F ++ D+ +N++I
Sbjct: 238 GVFREMVTGDSVVWNSIIA 256
>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:21773208-21775311 | 20130731
Length = 662
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 133/265 (50%), Gaps = 17/265 (6%)
Query: 21 SLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLIS 79
SL TLK +H +L +G +L ++ L+ K + T A +F +PN + +N++IS
Sbjct: 16 SLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMIS 74
Query: 80 SFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFL 139
S S + A LY+ +L L P+++TF ++FKA G + G H +
Sbjct: 75 SHVSR-GKTKEAIELYSNMLFEGVL-PDAYTFSAIFKAFSEMG-VSREGQKAHGLAVVLG 131
Query: 140 EPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLE 199
D FV +++ YAK+G++ +R +FD++ + D+ + L+
Sbjct: 132 FEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQH---------- 181
Query: 200 DADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRF 259
L EAL +F DM SR +PNE TL +++ +C NLG L G H +++ L+
Sbjct: 182 --GLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVA 239
Query: 260 VGTALVDMYSKCGCLNLACQLFDQL 284
T+L+ MYSKC + + ++F+ L
Sbjct: 240 SQTSLLTMYSKCNMVEDSIKVFNSL 264
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 18/236 (7%)
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS 121
+F + + V L+ LI + H A ++ ++ + ++PN +T S+ +C
Sbjct: 159 VFDRVLDKDVVLFTALIVGYNQHGLDGE-ALEVFEDMVGSR-IKPNEYTLASVLVSCGNL 216
Query: 122 GHWFQYGPPLHAHVLKF-LEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWN 180
G G +H V+K+ LE Q SLL Y+K + S +F+ ++ TW
Sbjct: 217 GDLVN-GKLIHGLVVKYGLESVVAS--QTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWT 273
Query: 181 TLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALS 240
+ + AL +F +M PN TL +++ ACS+L L
Sbjct: 274 SFIVGLVQNGREEV------------ALSMFREMMRCSISPNHFTLSSILHACSSLAMLE 321
Query: 241 QGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G H ++ + N+FV AL+ +Y KCG + A +FD LT+ D N MI
Sbjct: 322 AGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMI 377
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 133/288 (46%), Gaps = 23/288 (7%)
Query: 15 LLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
+L C +L L K +H ++ GL + LLT+ SK ++ +F+S+ +
Sbjct: 209 VLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYAS 268
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+ + I + + +A S++ R + ++ PN FT S+ AC S + G
Sbjct: 269 HVTWTSFIVGLVQNGRE-EVALSMF-REMMRCSISPNHFTLSSILHACS-SLAMLEAGEQ 325
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+HA +K L + FV A+L++ Y K G + +R +FD ++E D+ + NT++
Sbjct: 326 IHAVTVK-LGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQN- 383
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
EAL LF ++ PN VT ++++ AC+N G + +G L+
Sbjct: 384 -----------GFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFS-LI 431
Query: 251 RNN--LKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
RNN ++L R T ++D+ + A L ++ + D + ++
Sbjct: 432 RNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLL 479
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 15/169 (8%)
Query: 129 PPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXX 188
LH H+LK F L++ Y K + +R LFD++ + TWN+++
Sbjct: 21 KSLHTHILK--SGSLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVS 78
Query: 189 XXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCY 248
+ EA+ L+ +M P+ T A+ A S +G +G H
Sbjct: 79 RGK------------TKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGL 126
Query: 249 LLRNNLKL-NRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ ++ + FV T +VDMY+K G + A +FD++ D+D + A+I
Sbjct: 127 AVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALI 175
>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21515828-21518970 | 20130731
Length = 616
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 140/275 (50%), Gaps = 23/275 (8%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFT-- 82
++VHA M+ T + + L+ + +K S A +F +P V + +IS+++
Sbjct: 60 QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQR 119
Query: 83 SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPP 142
++SQ A +L+ ++L T +PN FTF ++ +C S F G +H+ ++K
Sbjct: 120 GYASQ---ALNLFLQMLRSGT-EPNEFTFATVLTSCTSS-LGFILGRQIHSLIIKL--NY 172
Query: 143 YDH-FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDA 201
DH FV +SLL+ YAK G++ +R +F+ + E D+ + ++
Sbjct: 173 EDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQL------------ 220
Query: 202 DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG 261
L EAL LF +Q + N VT +++A S L AL G H ++LR+ + +
Sbjct: 221 GLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQ 280
Query: 262 TALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+L+DMYSKCG L + ++FD + +R +NAM+
Sbjct: 281 NSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAML 315
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 24/223 (10%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSH 84
+Q+H+ ++ H + S LL + +K + A T+F +P V +IS +
Sbjct: 161 RQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGY--- 217
Query: 85 SSQIHL---AFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEP 141
+Q+ L A L+ R L + ++ N T+ + A G G +H HVL+ E
Sbjct: 218 -AQLGLDEEALELFRR-LQGEGMKSNYVTYTGVLTALSGLA-ALDLGKQVHNHVLRS-EI 273
Query: 142 PYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDA 201
P +Q SL++ Y+K G L SR +FD + E + +WN +L
Sbjct: 274 PSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGE---------- 323
Query: 202 DLSLEALYLFCDM-QMSRRRPNEVTLVALISACSNLGALSQGV 243
E L LF M + ++ +P+ VT++A++S CS+ G +G+
Sbjct: 324 --GREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGL 364
>Medtr7g076707.1 | PPR containing plant-like protein | HC |
chr7:28928185-28925455 | 20130731
Length = 569
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 125/238 (52%), Gaps = 17/238 (7%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F IP PT+ +N +I + S ++Q A YN ++ + L N+ T+P L KAC
Sbjct: 30 ANELFRQIPRPTLSHWNIMIRGW-SQTNQPIEAIRNYN-LMYSQALFGNNLTYPFLLKAC 87
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
+ +HA VLK L D FV +L++ YA + L +R +FD++SE DL +
Sbjct: 88 ARISN--VSCTTVHARVLK-LGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDLVS 144
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
WN+L+ E L +F +M+M+ + + VT+V ++ AC+ LG
Sbjct: 145 WNSLICGYGRCRRYS------------EVLVVFEEMRMADVKGDAVTMVKVVLACTVLGE 192
Query: 239 LSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
Y+ N ++++ ++G L+DMY + ++LA ++FD++ DR+ +NAMI
Sbjct: 193 WGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMI 250
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 145/309 (46%), Gaps = 36/309 (11%)
Query: 15 LLQKCHSLNTLK--QVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTV 71
LL+ C ++ + VHA++L G + + L+ + +A +F + +
Sbjct: 83 LLKACARISNVSCTTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDL 142
Query: 72 FLYNTLISSFTS--HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGP 129
+N+LI + S++ + F + ++ ++ T + AC G W
Sbjct: 143 VSWNSLICGYGRCRRYSEVLVVFEE----MRMADVKGDAVTMVKVVLACTVLGEW----- 193
Query: 130 PLHAHVLKFLEP---PYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXX 186
+ +++++E D ++ +L++ Y + + ++R +FD++ + ++ +WN ++
Sbjct: 194 GVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGY 253
Query: 187 XXXXXXXXXXXLED-------------------ADLSLEALYLFCDMQMSRRRPNEVTLV 227
L D A +A+ LF +M +++ +P+E+T+
Sbjct: 254 GKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVA 313
Query: 228 ALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDR 287
+++SAC+++GAL G H Y+ + ++ + +VG AL+DMY KCG + +F+++ R
Sbjct: 314 SVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKR 373
Query: 288 DTFCYNAMI 296
D+ + ++I
Sbjct: 374 DSVSWTSVI 382
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 26/244 (10%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F +P+ V + ++ISS+ S + Q A L+ ++ K ++P+ T S+ AC
Sbjct: 262 ARKLFDDMPHRDVISWTSMISSY-SQAGQFGKAVRLFQEMMVTK-VKPDEITVASVLSAC 319
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
G G +H ++ K+ + D +V +L++ Y K G + +F+++ + D +
Sbjct: 320 AHIGA-LDVGEAVHEYIRKY-DVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVS 377
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
W +++ AD AL LF M RP T V ++ AC++ G
Sbjct: 378 WTSVIAGLAVNGS---------AD---SALNLFSLMLREGVRPTHGTFVGVLLACAHAGV 425
Query: 239 LSQGV-----WTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL-TDRDTFCY 292
+ +G+ Y L +K V VD+ S+ G L A + ++ D D +
Sbjct: 426 VDKGLEYFESMERVYGLTPEMKHYGCV----VDLLSRSGNLGRAYEFIKRMPMDPDVVVW 481
Query: 293 NAMI 296
++
Sbjct: 482 RILL 485
>Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0013:48776-47089 | 20130731
Length = 558
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 137/278 (49%), Gaps = 24/278 (8%)
Query: 25 LKQVHAQMLTTG-LALH--TYCLSHLLTISSKLASTYALTIFSSIPNPTVFLYNTLISSF 81
+KQ+ A ++TTG H L L ++S + A IF I NPT YN ++
Sbjct: 1 MKQLQAHLITTGKFQFHPSRTKLLELFSVSPSGNLSLAGNIFRQIQNPTTNDYNAILRGL 60
Query: 82 TSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEP 141
+ SS+ + S Y +L + ++ T K C F LH+ VL+F
Sbjct: 61 -AQSSEPTQSISWYRDMLCC-VQRVDALTCSFALKGCA-RALAFSEATQLHSQVLRF--- 114
Query: 142 PYD--HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLE 199
+D + +LL+ YAK G + +R +FD++ + D+A+WN ++ L
Sbjct: 115 GFDADVLLLTTLLDVYAKTGFIDYARKVFDEMDKRDIASWNAMISG------------LA 162
Query: 200 DADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRF 259
EA+ LF M+ RPN+VT++ +SACS LGAL +G H Y+L L N
Sbjct: 163 QGSRPDEAIALFNRMKEEGWRPNDVTVLGALSACSQLGALKEGEIVHRYVLDEKLDRNVI 222
Query: 260 VGTALVDMYSKCGCLNLACQLFDQLTDRDT-FCYNAMI 296
V A++DM++KCG ++ A +F+ ++ R + +N MI
Sbjct: 223 VCNAVIDMFAKCGFVDKAYSVFESMSCRKSLITWNTMI 260
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 121/276 (43%), Gaps = 22/276 (7%)
Query: 13 LKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFSSIPNPTV 71
LK + + + Q+H+Q+L G L+ LL + +K YA +F + +
Sbjct: 92 LKGCARALAFSEATQLHSQVLRFGFDADVLLLTTLLDVYAKTGFIDYARKVFDEMDKRDI 151
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPL 131
+N +IS + S+ A +L+NR + + +PN T AC G + G +
Sbjct: 152 ASWNAMISGL-AQGSRPDEAIALFNR-MKEEGWRPNDVTVLGALSACSQLGA-LKEGEIV 208
Query: 132 HAHVLKFLEPPYDH--FVQASLLNFYAKYGRLCVSRCLFDQIS-EPDLATWNTLLXXXXX 188
H +VL + D V ++++ +AK G + + +F+ +S L TWNT++
Sbjct: 209 HRYVL---DEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSCRKSLITWNTMIMAFAM 265
Query: 189 XXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCY 248
+AL L M + P+ V+ + + AC++ G + +GV
Sbjct: 266 NGD------------GYKALDLLDRMSLDGTCPDAVSYLGALCACNHAGLVDEGVRLFDL 313
Query: 249 LLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
+ + +KLN ++VD+ + G L A ++ + +
Sbjct: 314 MKVSGVKLNVKHYGSMVDLLGRAGRLKEAYEIINSM 349
>Medtr5g024360.1 | PPR containing plant-like protein | HC |
chr5:9808546-9804666 | 20130731
Length = 611
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 145/306 (47%), Gaps = 39/306 (12%)
Query: 10 HP--ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYC--LSHLLT--ISSKLAS--TYALT 61
HP IL LL KC +L K HA +LTT ++T LS L+ + S YA
Sbjct: 3 HPNTILSLLPKCKTLLQFKTSHALILTTPTTINTKIIPLSKLIDFCVDSHFDEYFNYANL 62
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS 121
+F I +P V+++N++I + + S+ ++ LY ++L P+ FTFP + KAC
Sbjct: 63 LFRQIHSPNVYIFNSMIKGY-AKSNNPTMSLHLYKQML-QNGYSPDHFTFPFVLKACS-- 118
Query: 122 GHWFQY----GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLA 177
F Y G +H+ +LK + +V LLN Y + + +FD+I + ++
Sbjct: 119 ---FIYDQVSGKCVHSCILKS-GFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVV 174
Query: 178 TWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLG 237
W L+ D EAL +F +M NEVT+V + AC+
Sbjct: 175 AWTCLINGYVIN------------DQPREALEVFKEMGRWGVEANEVTMVNALIACARCR 222
Query: 238 ALSQGVWTHCYLLRNNL-------KLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTF 290
+ G W H + + N + TA+V+MY+KCG LN+A +LF+++ +R+
Sbjct: 223 DVDTGRWVHERVCKAGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIV 282
Query: 291 CYNAMI 296
+N MI
Sbjct: 283 AWNCMI 288
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 39/287 (13%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSH 84
K VH+ +L +G + Y + LL + + + L +F IP V + LI+ + +
Sbjct: 127 KCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLINGYVIN 186
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACC-----GSGHWFQYGPPLHAHVLKFL 139
Q A ++ + ++ N T + AC +G W +H V K
Sbjct: 187 D-QPREALEVFKE-MGRWGVEANEVTMVNALIACARCRDVDTGRW------VHERVCK-- 236
Query: 140 EPPYDHFVQAS---------LLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
YD FV AS ++ YAK G L V+R LF+++ E ++ WN ++
Sbjct: 237 -AGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYE 295
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
EAL LF M + P++ T ++++S C+ L+ G H YLL
Sbjct: 296 RYN------------EALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLL 343
Query: 251 RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQ-LTDRDTFCYNAMI 296
++N+ + + TAL+DMY+K G L A ++F+ L +D + +MI
Sbjct: 344 KSNMAKDIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMI 390
>Medtr4g131300.1 | PPR containing plant-like protein | HC |
chr4:54775340-54772788 | 20130731
Length = 734
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 134/274 (48%), Gaps = 17/274 (6%)
Query: 24 TLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFT 82
T +QVH+ + GL + L+T+ +K S A+ F + ++ +++ +
Sbjct: 237 TGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGY- 295
Query: 83 SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPP 142
+ A L+N++ + L P+ FT + AC + G +H+ K L
Sbjct: 296 AQGGDSDKALKLFNKMHSSGVL-PSEFTLVGVINACSDLCAVVE-GKQMHSFAFK-LGFG 352
Query: 143 YDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDAD 202
+V +++++ YAK G L +R F+ + +PD+ W +++ +++ D
Sbjct: 353 LQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGY-----------VQNGD 401
Query: 203 LSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGT 262
L L+ MQM R PNE+T+ +++ ACS+L AL QG H +++ KL +G+
Sbjct: 402 YE-GGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGS 460
Query: 263 ALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
AL MY+KCG L+ +F ++ RD +NAMI
Sbjct: 461 ALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMI 494
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 143/289 (49%), Gaps = 21/289 (7%)
Query: 15 LLQKCHSLNTLKQ--VHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPN--P 69
L++ H+ N LK +HA++L TG Y + L + +K ++ALT+F SI +
Sbjct: 18 LIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDK 77
Query: 70 TVFLYNTLISSFTSH--SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
+N+LI++F+ + SS A SL+ R++ + PN+ T +F A
Sbjct: 78 DDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVA- 136
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G H+ +K D +V +SLLN Y K G + +R LFD++ E + +W T++
Sbjct: 137 GKQAHSVAVK-TGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYA 195
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
+D++ +A+ +F M+ NE L +++SA ++ + G H
Sbjct: 196 S------------SDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHS 243
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
++N L V ALV MY+KCG L+ A + F+ D+++ ++AM+
Sbjct: 244 LAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMV 292
>Medtr8g065730.2 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 160/341 (46%), Gaps = 55/341 (16%)
Query: 9 NH--PILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSS 65
NH +LKL + H+ K +H+ ++ T T+ L++L++ +KL S YA +F
Sbjct: 10 NHYCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQ 69
Query: 66 IPNPTVFLYNTLISSFT--SHSSQIHLAFS----------------------LYNRILAH 101
+P+P ++ +NT++S+++ S++ F +Y + A+
Sbjct: 70 MPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAY 129
Query: 102 K-------TLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNF 154
++ N TF +L G + G +H HV+KF Y FV + L++
Sbjct: 130 NLMLKNDGSINLNRITFSTLLILASKRG-CVKLGRQIHGHVVKFGFMSY-VFVGSPLVDM 187
Query: 155 YAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXL----EDAD-------- 202
Y+K G + +R +FD++ E ++ +NTL+ L + D
Sbjct: 188 YSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 247
Query: 203 -------LSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLK 255
L +A+ +F +M++ + ++ T ++++AC + AL +G H Y++R + K
Sbjct: 248 TGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYK 307
Query: 256 LNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
N FV +ALV+MY KC + A +F ++T ++ + AM+
Sbjct: 308 DNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAML 348
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 145/323 (44%), Gaps = 46/323 (14%)
Query: 5 NPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIF 63
N I +L L K + +Q+H ++ G + + S L+ + SK+ + A +F
Sbjct: 142 NRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVF 201
Query: 64 SSIPNPTVFLYNTLI---------------------------SSFTSHSSQIHL---AFS 93
+P V +YNTLI +S + +Q L A
Sbjct: 202 DELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAID 261
Query: 94 LYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLN 153
++ R + + LQ + +TF S+ AC G Q G +HA++++ + + FV ++L+
Sbjct: 262 IF-REMKLENLQMDQYTFGSVLTAC-GGVMALQEGKQVHAYIIR-TDYKDNIFVASALVE 318
Query: 154 FYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCD 213
Y K + + +F +++ ++ +W +L S EA+ F D
Sbjct: 319 MYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQN------------GYSEEAVKTFSD 366
Query: 214 MQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGC 273
MQ P++ TL ++IS+C+NL +L +G H L + L V ALV +Y KCG
Sbjct: 367 MQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGS 426
Query: 274 LNLACQLFDQLTDRDTFCYNAMI 296
+ + +LF++++ +D + A++
Sbjct: 427 IEDSHRLFNEISFKDEVTWTALV 449
>Medtr8g065730.1 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 160/341 (46%), Gaps = 55/341 (16%)
Query: 9 NH--PILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSS 65
NH +LKL + H+ K +H+ ++ T T+ L++L++ +KL S YA +F
Sbjct: 10 NHYCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQ 69
Query: 66 IPNPTVFLYNTLISSFT--SHSSQIHLAFS----------------------LYNRILAH 101
+P+P ++ +NT++S+++ S++ F +Y + A+
Sbjct: 70 MPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAY 129
Query: 102 K-------TLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNF 154
++ N TF +L G + G +H HV+KF Y FV + L++
Sbjct: 130 NLMLKNDGSINLNRITFSTLLILASKRG-CVKLGRQIHGHVVKFGFMSY-VFVGSPLVDM 187
Query: 155 YAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXL----EDAD-------- 202
Y+K G + +R +FD++ E ++ +NTL+ L + D
Sbjct: 188 YSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 247
Query: 203 -------LSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLK 255
L +A+ +F +M++ + ++ T ++++AC + AL +G H Y++R + K
Sbjct: 248 TGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYK 307
Query: 256 LNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
N FV +ALV+MY KC + A +F ++T ++ + AM+
Sbjct: 308 DNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAML 348
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 145/323 (44%), Gaps = 46/323 (14%)
Query: 5 NPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIF 63
N I +L L K + +Q+H ++ G + + S L+ + SK+ + A +F
Sbjct: 142 NRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVF 201
Query: 64 SSIPNPTVFLYNTLI---------------------------SSFTSHSSQIHL---AFS 93
+P V +YNTLI +S + +Q L A
Sbjct: 202 DELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAID 261
Query: 94 LYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLN 153
++ R + + LQ + +TF S+ AC G Q G +HA++++ + + FV ++L+
Sbjct: 262 IF-REMKLENLQMDQYTFGSVLTAC-GGVMALQEGKQVHAYIIR-TDYKDNIFVASALVE 318
Query: 154 FYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCD 213
Y K + + +F +++ ++ +W +L S EA+ F D
Sbjct: 319 MYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQN------------GYSEEAVKTFSD 366
Query: 214 MQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGC 273
MQ P++ TL ++IS+C+NL +L +G H L + L V ALV +Y KCG
Sbjct: 367 MQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGS 426
Query: 274 LNLACQLFDQLTDRDTFCYNAMI 296
+ + +LF++++ +D + A++
Sbjct: 427 IEDSHRLFNEISFKDEVTWTALV 449
>Medtr3g072900.1 | PPR containing plant-like protein | HC |
chr3:32815251-32818532 | 20130731
Length = 745
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 137/295 (46%), Gaps = 48/295 (16%)
Query: 21 SLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLIS 79
S+ K +H+ ++ +G H + L++++++ SK +S A +F +P+ + + T++S
Sbjct: 18 SIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVS 77
Query: 80 SFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFL 139
T +SS H A SLYN ++ K QPN F + ++ KA CG + G +H H+ +
Sbjct: 78 VLT-NSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKA-CGLVRNVELGKMVHYHIFQ-A 134
Query: 140 EPPYDHFVQASLLNFYAKYGRL-------CVSRC------------------------LF 168
+ D + +LL+ Y K G L C C LF
Sbjct: 135 KLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLF 194
Query: 169 DQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVA 228
D++ EPD+ +WN+++ + S AL M + +E T +
Sbjct: 195 DKMPEPDIVSWNSIIAGLVD-------------NASSRALRFVSMMHGKGLKMDEFTFPS 241
Query: 229 LISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQ 283
++ AC L G HCY++++ + + + +AL+DMYS C L+ A ++FDQ
Sbjct: 242 VLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQ 296
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 122/246 (49%), Gaps = 28/246 (11%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A+ +F +P P + +N++I+ ++S L F ++ K L+ + FTFPS+ KAC
Sbjct: 190 AMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFV---SMMHGKGLKMDEFTFPSVLKAC 246
Query: 119 CGSGHWFQYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQ------ 170
G G +H +++K F Y ++L++ Y+ L + +FDQ
Sbjct: 247 -GCSDELMLGREIHCYIIKSGFESSCY---CISALIDMYSSCKLLSEATKIFDQYFRNSS 302
Query: 171 ISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALI 230
+SE LA WN++L + + D +EAL + M S R + T ++
Sbjct: 303 VSES-LALWNSMLSGH-----------VVNGDY-VEALSMISHMHRSGVRFDFYTFSIVL 349
Query: 231 SACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTF 290
C N LS H +++ + +L+ VG+ L+D+Y+K G +N A +LF++L D+D
Sbjct: 350 KICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVV 409
Query: 291 CYNAMI 296
++++I
Sbjct: 410 AWSSLI 415
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 138/295 (46%), Gaps = 31/295 (10%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
+LK+ +L+ QVH ++T+G L S L+ I +K S AL +F +P+
Sbjct: 348 VLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKD 407
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCG-SGHWFQYGP 129
V +++LI+ S LAFSL+ ++ H LQ + F + KAC + H Q+G
Sbjct: 408 VVAWSSLITGCARFGSD-KLAFSLFMDMI-HLGLQIDHFVISIVLKACSSLASH--QHGK 463
Query: 130 PLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXX 189
+H+ LK + V +L++ YAK G + + LF +SE D +W +++
Sbjct: 464 QVHSLCLK-KGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQN 522
Query: 190 XXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYL 249
EA+ L M S +PN++T++ +++AC + G L + W
Sbjct: 523 GRAE------------EAISLLHKMIESGTKPNKITILGVLTACRHSG-LVEEAWD---- 565
Query: 250 LRNNLKLNRFV------GTALVDMYSKCGCLNLACQLFDQLTDR-DTFCYNAMIG 297
+ N+++ N + +VD+ + G A +L ++ + D +++++G
Sbjct: 566 VFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLG 620
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 129/279 (46%), Gaps = 26/279 (9%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTI--SSKLASTYALTIF-----SSIPNPTVFLYNTLI 78
+++H ++ +G YC+S L+ + S KL S A IF +S + ++ L+N+++
Sbjct: 256 REIHCYIIKSGFESSCYCISALIDMYSSCKLLSE-ATKIFDQYFRNSSVSESLALWNSML 314
Query: 79 SSFTSHSSQIHLAFSLYNRILAHKT-LQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLK 137
S + + A S+ + + H++ ++ + +TF + K C + +H V+
Sbjct: 315 SGHVVNGDYVE-ALSMISHM--HRSGVRFDFYTFSIVLKICMNFDN-LSLASQVHGFVIT 370
Query: 138 FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXX 197
D V + L++ YAK G + + LF+++ + D+ W++L+
Sbjct: 371 S-GYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKL--- 426
Query: 198 LEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLN 257
A LF DM + + + ++ ACS+L + G H L+ +
Sbjct: 427 ---------AFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESE 477
Query: 258 RFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
V TAL+DMY+KCG + A LF L++ DT + ++I
Sbjct: 478 GVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSII 516
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 88/168 (52%), Gaps = 16/168 (9%)
Query: 131 LHAHVLKFLEPPYDH-FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXX 189
LH+H++K +H F+ ++++ Y+K + +R +FD++ ++ +W T++
Sbjct: 25 LHSHIIK--SGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVSV---- 78
Query: 190 XXXXXXXXLEDADLSLEALYLFCDMQMSR-RRPNEVTLVALISACSNLGALSQGVWTHCY 248
L ++ + EAL L+ +M S+ +PN+ A++ AC + + G H +
Sbjct: 79 --------LTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYH 130
Query: 249 LLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ + L ++ + AL+DMY KCG L A ++F ++ ++ +N +I
Sbjct: 131 IFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLI 178
>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:40268645-40272453 | 20130731
Length = 678
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 135/285 (47%), Gaps = 27/285 (9%)
Query: 18 KCHSLNTLKQVHAQMLTTGLALHTYCLSHLL--TISSKLASTYALTIFSSIP-NPTVFLY 74
KC L K H ++L L LS +L TI+ + Y + +F P N FLY
Sbjct: 15 KC--LKHAKLAHCRLLRLNLHHDNDLLSIILRSTINFSNNAQYPILVFHKTPTNSNTFLY 72
Query: 75 NTLISSFTSH---SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPL 131
NT+I S ++ +HL S++ + P+SFTF + KAC + F G +
Sbjct: 73 NTMIRGMVSKDRFNNAVHLYASMHK-----AAIVPDSFTFSFVLKAC-ARLNLFHLGVMI 126
Query: 132 HAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXX 191
H+ V K D FV+ +++ FY+K G L + +FD + ++ +W ++
Sbjct: 127 HSLVFK-TGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGK 185
Query: 192 XXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLR 251
EA+ LF + S RP+ +V ++ AC+ LG L G W +
Sbjct: 186 FR------------EAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRE 233
Query: 252 NNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L N FV T+LVDMY+KCG + A +FD + ++D C++AMI
Sbjct: 234 CGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMI 278
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 124/291 (42%), Gaps = 30/291 (10%)
Query: 15 LLQKCHSLNTLK---QVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
+L+ C LN +H+ + TG + ++++ SK A +F +
Sbjct: 110 VLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKN 169
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACC-----GSGHWF 125
V + +I + A L+ R L L+P+ F + +AC SG W
Sbjct: 170 VVSWTGMICGCIEFG-KFREAVDLF-RGLLESGLRPDGFVIVRVLRACARLGDLESGRWI 227
Query: 126 QYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXX 185
++ + FV SL++ Y K G + +R +FD + E D+ W+ ++
Sbjct: 228 D-------RCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQG 280
Query: 186 XXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWT 245
L EA+ LF +M+ RP+ +V +S+C++LGAL G W
Sbjct: 281 YASN------------GLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWA 328
Query: 246 HCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ N +GT+L+D Y+KCG + A ++ + ++D +NA+I
Sbjct: 329 KGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVI 379
>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:17991225-17993175 | 20130731
Length = 586
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 134/292 (45%), Gaps = 41/292 (14%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTI----SSKLASTYALTIFSSIP 67
++ L+ KC +L LKQ+ A + T +T ++ + +K + +A +F I
Sbjct: 29 LISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFDQIT 88
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC---CGSGHW 124
P + L+NT+ + + + R++ H F+ C
Sbjct: 89 QPNIVLFNTMARGYARLNDPL--------RMITH-------------FRRCLRLVSKVKA 127
Query: 125 FQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLX 184
G LH +K L + +V +L+N Y G + SR +FD+I EP + +N ++
Sbjct: 128 LAEGKQLHCFAVK-LGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIM 186
Query: 185 XXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVW 244
L + + EAL LF ++Q +P +VT++ ++S+C+ LG+L G W
Sbjct: 187 S------------LARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRW 234
Query: 245 THCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H Y+ + V T L+DMY+KCG L+ A +F + RDT ++A+I
Sbjct: 235 MHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAII 286
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 128/277 (46%), Gaps = 24/277 (8%)
Query: 13 LKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYA-LTIFSSIPNPTV 71
L+L+ K +L KQ+H + G++ + Y + L+ + + A +F I P V
Sbjct: 119 LRLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCV 178
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPL 131
YN +I S + +++ + A +L+ R L L+P T + +C G G +
Sbjct: 179 VAYNAIIMSL-ARNNRANEALALF-RELQEIGLKPTDVTMLVVLSSCALLGS-LDLGRWM 235
Query: 132 HAHVLKFLEPPYDHFVQA--SLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXX 189
H +V K+ +D +V+ +L++ YAK G L + +F + + D W+ ++
Sbjct: 236 HEYVKKY---GFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATH 292
Query: 190 XXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYL 249
+A+ + +M+ + +P+E+T + ++ ACS+ G + +G + + +
Sbjct: 293 GD------------GFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEG-FEYFHG 339
Query: 250 LRNNLKLNRFVG--TALVDMYSKCGCLNLACQLFDQL 284
+ N + + +VD+ + G L+ A + D+L
Sbjct: 340 MTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDEL 376
>Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:44861451-44859606 | 20130731
Length = 554
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 136/280 (48%), Gaps = 40/280 (14%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSKL--ASTYALTIFSSIPNP-TVFLYNTLISSFTS 83
++HA ++ TG + + L S A+ YA T+ +P P F YNT+I +
Sbjct: 6 KLHATLIKTGQHQNPHSLRPFFLTCSNYPAAARYAATVLLRLPTPPDPFSYNTIIKHVSP 65
Query: 84 HSSQIHLAFSLYNRILAHKTLQP-NSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPP 142
A SL++ + H+ P + FTFP + K +
Sbjct: 66 TG-----AISLFSHM--HRNSVPFDHFTFPLILKHHHHH-----------LLHSLIFKLG 107
Query: 143 YDH--FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLED 200
+D FVQ +L+N Y G L V+ LFD++ D+ +W+TL+ L
Sbjct: 108 FDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISC------------LVK 155
Query: 201 ADLSLEALYLFCDMQMSRRRP----NEVTLVALISACSNLGALSQGVWTHCYLLRNNLKL 256
+L EAL +F MQM R + ++++ISA S+LG + G+W H +++R + +
Sbjct: 156 NNLPAEALSVFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVM 215
Query: 257 NRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+GTAL++MYS+CG ++ + ++FD++ +R+ + A+I
Sbjct: 216 TVPLGTALINMYSRCGLIDRSVKVFDEMPERNVVTWTALI 255
>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:453448-455881 | 20130731
Length = 668
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 135/289 (46%), Gaps = 21/289 (7%)
Query: 14 KLLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNP 69
KLL++C L LKQ VH ++ + + +L + +K S A +F +
Sbjct: 96 KLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVK 155
Query: 70 TVFLYNTLISSFT--SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
V + ++I+ ++ ++S A L+ ++ L+PN F SL K CCG
Sbjct: 156 DVVTWTSMITGYSQDGYASSATTALVLFLEMV-RDGLRPNEFALSSLVK-CCGFLGSCVD 213
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G +H K+ + FV +SL++ YA+ G L SR +FD++ + +WN L+
Sbjct: 214 GKQIHGCCWKY-GFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFA 272
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
EAL LF MQ E T AL+ + S G+L QG W H
Sbjct: 273 RKGEGE------------EALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHA 320
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+++++ KL +VG L+ MY+K G + A ++FD+L D N+M+
Sbjct: 321 HMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSML 369
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 15/201 (7%)
Query: 98 ILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVL--KFLEPPYDHFVQASLLNFY 155
++ + +L+P+ + L K C G + G +H H++ KF D ++ S+L Y
Sbjct: 81 LINNGSLEPDRTIYNKLLKRCTMLGK-LKQGKLVHTHLMNSKFRN---DLVIKNSILFMY 136
Query: 156 AKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQ 215
AK G L ++R +FD++ D+ TW +++ A + AL LF +M
Sbjct: 137 AKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGY---------ASSATTALVLFLEMV 187
Query: 216 MSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLN 275
RPNE L +L+ C LG+ G H + + N FVG++LVDMY++CG L
Sbjct: 188 RDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELR 247
Query: 276 LACQLFDQLTDRDTFCYNAMI 296
+ +FD+L ++ +NA+I
Sbjct: 248 ESRLVFDELESKNEVSWNALI 268
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 134/277 (48%), Gaps = 23/277 (8%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSH 84
KQ+H G + + S L+ + ++ + +F + + +N LIS F +
Sbjct: 215 KQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGF-AR 273
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
+ A L+ + + + FT+ +L + +G + G LHAH++K +
Sbjct: 274 KGEGEEALGLFVK-MQREGFGATEFTYSALLCSSSTTGS-LEQGKWLHAHMMKSGKKLVG 331
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
+V +LL+ YAK G +C ++ +FD++ + D+ + N++L L
Sbjct: 332 -YVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQH------------GLG 378
Query: 205 LEALYLFCDMQM-SRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNL--KLNRFVG 261
EA+ LF +M + PN++T +++++ACS+ G L +G++ + + L KL+ +
Sbjct: 379 KEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHY-- 436
Query: 262 TALVDMYSKCGCLNLACQLFDQL-TDRDTFCYNAMIG 297
T +VD++ + G L+ A +++ + + + A++G
Sbjct: 437 TTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLG 473
>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:41831683-41828172 | 20130731
Length = 811
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 141/299 (47%), Gaps = 34/299 (11%)
Query: 9 NHPILKLLQKC---HSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALT---- 61
N I L+ C + N K VH G AL C H L + L YA +
Sbjct: 237 NFTISGALKSCLGLEAFNVGKSVH------GCALKG-CYDHDLFVGIALLELYAKSGEII 289
Query: 62 ----IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKA 117
+F +P + ++ +I+ + + S + A L+ R + ++ PN+FTF S+ +A
Sbjct: 290 DAQRLFEEMPKTDLIPWSLMIARY-AQSDRSKEALDLFLR-MRQTSVVPNNFTFASVLQA 347
Query: 118 CCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLA 177
C S G +H+ VLKF + FV ++++ YAK G + S LF+++ + +
Sbjct: 348 CASSVS-LDLGKQIHSCVLKF-GLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDV 405
Query: 178 TWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLG 237
TWNT++ L D + A+ LF M +P EVT +++ A ++L
Sbjct: 406 TWNTIIVGYVQ---------LGDGE---RAMNLFTHMLEHDMQPTEVTYSSVLRASASLA 453
Query: 238 ALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
AL G+ H ++ + V +L+DMY+KCG +N A FD++ RD +NAMI
Sbjct: 454 ALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMI 512
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 108/210 (51%), Gaps = 23/210 (10%)
Query: 91 AFSLYN--RILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDH--F 146
+ L+N RI+ +K PN+FT K+C G F G +H LK YDH F
Sbjct: 221 SLQLFNQMRIMGYK---PNNFTISGALKSCLGL-EAFNVGKSVHGCALK---GCYDHDLF 273
Query: 147 VQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLE 206
V +LL YAK G + ++ LF+++ + DL W+ ++ +D S E
Sbjct: 274 VGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYA------------QSDRSKE 321
Query: 207 ALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVD 266
AL LF M+ + PN T +++ AC++ +L G H +L+ L N FV A++D
Sbjct: 322 ALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMD 381
Query: 267 MYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+Y+KCG + + +LF++L DR+ +N +I
Sbjct: 382 VYAKCGEIENSMKLFEELPDRNDVTWNTII 411
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 118/238 (49%), Gaps = 20/238 (8%)
Query: 9 NHPILKLLQKCHS---LNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFS 64
N +LQ C S L+ KQ+H+ +L GL + + + ++ + +K ++ +F
Sbjct: 338 NFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFE 397
Query: 65 SIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHW 124
+P+ +NT+I + A +L+ +L H +QP T+ S+ +A S
Sbjct: 398 ELPDRNDVTWNTIIVGYVQLGDG-ERAMNLFTHMLEHD-MQPTEVTYSSVLRAS-ASLAA 454
Query: 125 FQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLX 184
+ G +H+ +K + D V SL++ YAK GR+ +R FD++++ D +WN ++
Sbjct: 455 LEPGLQIHSLTIKTMYNK-DTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMIC 513
Query: 185 XXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG 242
+S+EAL LF MQ + +PN++T V ++SACSN G L +G
Sbjct: 514 GYSMH------------GMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKG 559
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 17/273 (6%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSH 84
K +H +L G +L + + LL + S A +F +P + TL + S
Sbjct: 55 KHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGY-SR 113
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
Q H A RI + + N F F +L K S LHA V K L D
Sbjct: 114 DHQFHQALHFILRIFK-EGHEVNPFVFTTLLKLLV-SMDLAHLCWTLHACVYK-LGHHAD 170
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
FV +L++ Y+ G + V+R +FD I D+ +W ++
Sbjct: 171 AFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYE----------- 219
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTAL 264
E+L LF M++ +PN T+ + +C L A + G H L+ + FVG AL
Sbjct: 220 -ESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIAL 278
Query: 265 VDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+++Y+K G + A +LF+++ D ++ MI
Sbjct: 279 LELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIA 311
>Medtr3g466010.1 | PPR containing plant-like protein | HC |
chr3:27120018-27122473 | 20130731
Length = 536
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 143/320 (44%), Gaps = 44/320 (13%)
Query: 11 PILKLLQKCHSLNTLKQVHAQMLTTG-----LALHTYCLSHLLTISSKLASTYALTIFSS 65
PI L K +LN +KQ HA+++ +G L +H L S Y+L+IF+S
Sbjct: 10 PIFPSLPKQPTLNQIKQTHAKIILSGQSQSRLTIHIL----SLLSLSTSPLNYSLSIFNS 65
Query: 66 IPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWF 125
I + TV +N++I + S+ + + L N TF L AC F
Sbjct: 66 ISSQTVLAFNSIIR-IHAKSNSSPSNSLSLYSSMRRRFLNANQHTFTFLLHACTKGKDCF 124
Query: 126 QY--GPPLHAHVLKFLEPPYDHFVQASLLNFY------AKYGRLCVSRCLFDQISE--PD 175
G +H HV+K L + FV+ +L++FY ++Y + R +++ E D
Sbjct: 125 NIVSGVQVHDHVVK-LGYTGNVFVRNALIHFYFEGFDVSEYAK----RVFEEEVDEVCSD 179
Query: 176 LATWNTLLXXXXXXXXXXXXXXLEDA------------------DLSLE-ALYLFCDMQM 216
+ TWN++L + D + LE L F M+
Sbjct: 180 VVTWNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYVQNGKLEDGLECFRLMRE 239
Query: 217 SRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNL 276
RPNE LV ++SA + LG L G + H + +++ +GT LVDMY+KCGC+
Sbjct: 240 KGIRPNESILVTMLSASAQLGLLGWGRFVHSTIESLRFRISVAIGTGLVDMYAKCGCIEE 299
Query: 277 ACQLFDQLTDRDTFCYNAMI 296
+ LFD + +RD + + MI
Sbjct: 300 SRDLFDGMMERDIWTWTVMI 319
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 110/243 (45%), Gaps = 19/243 (7%)
Query: 45 SHLLTISSKLASTYALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTL 104
S L + K A +F +P V ++++I + + ++ + R++ K +
Sbjct: 185 SMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYV-QNGKLEDGLECF-RLMREKGI 242
Query: 105 QPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVS 164
+PN ++ A G +G +H+ ++ L + L++ YAK G + S
Sbjct: 243 RPNESILVTMLSASAQLG-LLGWGRFVHS-TIESLRFRISVAIGTGLVDMYAKCGCIEES 300
Query: 165 RCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEV 224
R LFD + E D+ TW ++ L D + EAL LF + RP V
Sbjct: 301 RDLFDGMMERDIWTWTVMICG------------LASHDRAKEALVLFREFIREGFRPVNV 348
Query: 225 TLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG--TALVDMYSKCGCLNLACQLFD 282
V +++ACS G +S+G + + L+ + ++ + +VD++++ G ++ A +L +
Sbjct: 349 IFVGVLNACSRAGLVSEGRY-YFKLMVDGYGISPEMEHYGCMVDLFARAGLIDEAVRLIE 407
Query: 283 QLT 285
+T
Sbjct: 408 TMT 410
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 129/275 (46%), Gaps = 24/275 (8%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTI-SSKLASTYALTIFSSIPNP-TVFLYNTLISSFTSH 84
++H ++ G + H+ +HLLT S+ YA + P TV ++ LIS + +
Sbjct: 2 ELHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQN 61
Query: 85 S--SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAH-VLKFLEP 141
+ LAF+ + ++ N FTFP++ KAC G +HA V+ E
Sbjct: 62 GFHKEALLAFNEMCTL----GVKSNEFTFPTVLKACSIKKD-LNMGKKVHAMTVVSGFES 116
Query: 142 PYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDA 201
D FV +L+ YAK G+ S+ LF I EP + +WN L +
Sbjct: 117 --DAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHV------------QS 162
Query: 202 DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG 261
D E + LF M + RPNE +L +++AC+ L G H L++ L++F
Sbjct: 163 DFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSA 222
Query: 262 TALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
ALVDMY+K G + A +F ++ DT +NA+I
Sbjct: 223 NALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAII 257
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 22/289 (7%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
+LK LN K+VHA + +G + + L+ + +K + + +F I P
Sbjct: 89 VLKACSIKKDLNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPG 148
Query: 71 VFLYNTLISSFTSHSSQIHLA--FSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYG 128
V +N L F+ H LA L+ R++ K ++PN ++ + AC G G
Sbjct: 149 VVSWNAL---FSCHVQSDFLAETVDLFKRMVEGK-VRPNEYSLSIILNACAGLRDG-GIG 203
Query: 129 PPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXX 188
+H ++K L D F +L++ YAK GR+ + +F ++ PD +WN ++
Sbjct: 204 RTVHGLLMK-LGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVL 262
Query: 189 XXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCY 248
E DL AL L +M+ S PN TL + + AC+ +G G H
Sbjct: 263 H---------EYNDL---ALILLNEMKKSGSCPNVFTLSSALKACAAMGLKDLGRQIHSC 310
Query: 249 LLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRD-TFCYNAMI 296
++ + + FV L+D+YSKC ++ A + +D + +D NA+I
Sbjct: 311 SVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALI 359
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 131/301 (43%), Gaps = 23/301 (7%)
Query: 4 QNPIFNHP----ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TY 58
+N FN +LK + + KQ+H + G+ Y ++ LL K +
Sbjct: 381 ENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDE 440
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A IF + Y ++I++++ H A LY ++ ++P+ F SL AC
Sbjct: 441 ASKIFEERTWEDLVAYTSMITAYSQHGDA-EEALKLYLQMQV-ADIKPDPFVCSSLLNAC 498
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
+ Q G LH H +KF D F SL+N YAK G + + F +I + + +
Sbjct: 499 ANLSAYEQ-GKQLHVHAIKF-GFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVS 556
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
W+ ++ L EAL +F M PN +TLV+++ AC++ G
Sbjct: 557 WSAMIGG------------LAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGL 604
Query: 239 LSQGV-WTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLT-DRDTFCYNAMI 296
+++G + + +K + ++D+ + G LN A +L + + + D + A++
Sbjct: 605 VNEGKQYFETMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALL 664
Query: 297 G 297
G
Sbjct: 665 G 665
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 18/224 (8%)
Query: 75 NTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAH 134
N LIS + S A SL+ L H+ + N T ++ K+ Q H
Sbjct: 356 NALISGY-SQCGDDEQAISLFFE-LHHENIDFNQTTLSTVLKSVAS---LQQIKVCKQIH 410
Query: 135 VLKFLEPPY-DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXX 193
L Y D +V SLL+ Y K + + +F++ + DL + +++
Sbjct: 411 TLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHG--- 467
Query: 194 XXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNN 253
DA+ EAL L+ MQ++ +P+ +L++AC+NL A QG H + ++
Sbjct: 468 ------DAE---EALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQLHVHAIKFG 518
Query: 254 LKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+ F +LV+MY+KCG + A + F ++ R ++AMIG
Sbjct: 519 FMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIG 562
>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38323846-38321575 | 20130731
Length = 628
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 137/288 (47%), Gaps = 23/288 (7%)
Query: 16 LQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFS--SIPNP 69
LQ+C L KQ+H +L G ++ ++ + SK YAL +F+ + +
Sbjct: 36 LQQCAQTTNLTKGKQLHTHLLKNGFFASPLAITSIINMYSKCTLINYALKVFNYPTHHDK 95
Query: 70 TVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGP 129
VF YN +I+ F S+ H +F LY ++ + P+ FTFP + +AC +G F+
Sbjct: 96 NVFAYNAIIAGFVSNGLSQH-SFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGDVFEV-K 153
Query: 130 PLHAHVLKF-LEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXX 188
+H + KF LE D FV ++L+ Y K+ + + +F+++ D+ WN+++
Sbjct: 154 KIHGLLFKFGLE--LDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVNGYAQ 211
Query: 189 XXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCY 248
EAL +F M + P T+ ++S S +G G H +
Sbjct: 212 IGCFE------------EALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNGQAVHGF 259
Query: 249 LLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L + + V AL+DMY KC C + A +F+ + ++D F +N++I
Sbjct: 260 LTKMGYHSSVVVLNALIDMYGKCKCASDALNVFEVMDEKDMFSWNSII 307
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 128/283 (45%), Gaps = 29/283 (10%)
Query: 25 LKQVHAQMLTTGLALHTYCLSHLLTISSKL-ASTYALTIFSSIPNPTVFLYNTLISSFTS 83
+K++H + GL L + S L+T K A +F +P V L+N++++ + +
Sbjct: 152 VKKIHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVNGY-A 210
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPY 143
A ++ R++ + + P +T + G F G +H + K +
Sbjct: 211 QIGCFEEALGMFRRMVENGVV-PCRYTVTGVLSIYSVIGD-FDNGQAVHGFLTK-MGYHS 267
Query: 144 DHFVQASLLNFYAKYGRLCVSRCL--FDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDA 201
V +L++ Y K C S L F+ + E D+ +WN+++ +
Sbjct: 268 SVVVLNALIDMYGKCK--CASDALNVFEVMDEKDMFSWNSIISVH------------QRC 313
Query: 202 DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL--------RNN 253
L LF M ++ +P+ VT+ ++ AC++L AL G H Y++ RNN
Sbjct: 314 GDHYGTLKLFDRMLGNKVQPDLVTVTTVLPACTHLAALMHGREIHGYMIVNGLGKEGRNN 373
Query: 254 LKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ + AL+DMY+KCG + A +FD +T++D +N MI
Sbjct: 374 DFDDVLLNNALMDMYAKCGSMRDARMVFDNMTEKDVASWNIMI 416
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 110/240 (45%), Gaps = 23/240 (9%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFSSIPNPT 70
+L + + + VH + G L+ L+ + K ++ AL +F +
Sbjct: 240 VLSIYSVIGDFDNGQAVHGFLTKMGYHSSVVVLNALIDMYGKCKCASDALNVFEVMDEKD 299
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+F +N++IS + L++R+L +K +QP+ T ++ AC +G
Sbjct: 300 MFSWNSIISVHQRCGDH-YGTLKLFDRMLGNK-VQPDLVTVTTVLPACTHLAA-LMHGRE 356
Query: 131 LHAHVL------KFLEPPYDH-FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
+H +++ + +D + +L++ YAK G + +R +FD ++E D+A+WN ++
Sbjct: 357 IHGYMIVNGLGKEGRNNDFDDVLLNNALMDMYAKCGSMRDARMVFDNMTEKDVASWNIMI 416
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
EAL F M+ ++ PNE++ V L+SACS+ G + +G+
Sbjct: 417 TGYGMHGYGD------------EALDTFTRMRQAQLVPNEISFVGLLSACSHAGMVKEGL 464
>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:2848688-2851472 | 20130731
Length = 873
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 117/239 (48%), Gaps = 18/239 (7%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F +P +F +N L+ + + A +LY+R+L ++P+ +TFP + + C
Sbjct: 153 AWYVFGRMPERNLFSWNVLVGGY-AKGGFFDEALNLYDRML-WVGVRPDVYTFPCVLRTC 210
Query: 119 CGSGHWFQYGPPLHAHVLKF-LEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLA 177
G + G +H HVL+F E D V +L+ YAK G + +R +FD++ + D
Sbjct: 211 GGVPDLVK-GREIHVHVLRFGFESDVD--VINALITMYAKCGDIDTARLVFDKMPKKDRI 267
Query: 178 TWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLG 237
+WN ++ E+ + LE L LFC M P+ +T+ ++I+AC +G
Sbjct: 268 SWNAMIAGC-----------FENGE-CLEGLTLFCRMIEYPVDPDLMTMTSVITACELIG 315
Query: 238 ALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G H Y++R + V +L+ MYS G + A ++F Q RD + AMI
Sbjct: 316 DERLGREIHGYVMRTKFSRDPSVYNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMI 374
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 29/277 (10%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFSSIPNPTVFLYNTLISSFTSH 84
+++H ++ T + + L+ + S + A +FS V ++ +IS + ++
Sbjct: 321 REIHGYVMRTKFSRDPSVYNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMISGYENN 380
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC---CGSGHWFQYGPPLHAHVLKFLEP 141
A Y +++ + + P+ T + AC C G LH K
Sbjct: 381 LMH-QKALETY-KMMEAEGIIPDEITIGVVLSACSCLCD----LDTGMNLHEKAKKTGLI 434
Query: 142 PYDHFVQASLLNFYAKYGRLCVSRCL--FDQISEPDLATWNTLLXXXXXXXXXXXXXXLE 199
Y V L++ YAK C+ + L F I + ++ +W +++ L
Sbjct: 435 FY-VIVANKLIDMYAKCK--CIDKALEVFHSIRDKNIISWTSIILG------------LR 479
Query: 200 DADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRF 259
+ +AL+ F +M M R++PN VTLV ++SAC+ +GA + G H Y LR + + +
Sbjct: 480 INNRCYDALFFFKEM-MRRQKPNWVTLVCVLSACARIGAFTCGKEIHAYALRTGVSDDGY 538
Query: 260 VGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ A++DMY +CG + A + F + D+D +N ++
Sbjct: 539 MPNAVLDMYVRCGRMEYAWKQFFSI-DQDVSTWNILL 574
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 151 LLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYL 210
LL+ + K+G L + +F ++ E +L +WN L+ EAL L
Sbjct: 140 LLSMFVKFGNLVDAWYVFGRMPERNLFSWNVLVGGYA------------KGGFFDEALNL 187
Query: 211 FCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSK 270
+ M RP+ T ++ C + L +G H ++LR + + V AL+ MY+K
Sbjct: 188 YDRMLWVGVRPDVYTFPCVLRTCGGVPDLVKGREIHVHVLRFGFESDVDVINALITMYAK 247
Query: 271 CGCLNLACQLFDQLTDRDTFCYNAMI 296
CG ++ A +FD++ +D +NAMI
Sbjct: 248 CGDIDTARLVFDKMPKKDRISWNAMI 273
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 28/270 (10%)
Query: 21 SLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLIS 79
L+T +H + TGL + + L+ + +K AL +F SI + + + ++I
Sbjct: 417 DLDTGMNLHEKAKKTGLIFYVIVANKLIDMYAKCKCIDKALEVFHSIRDKNIISWTSIIL 476
Query: 80 SFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFL 139
++ + + A + ++ + +PN T + AC G F G +HA+ L+
Sbjct: 477 GLRINN-RCYDALFFFKEMMRRQ--KPNWVTLVCVLSACARIGA-FTCGKEIHAYALR-T 531
Query: 140 EPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLE 199
D ++ ++L+ Y + GR+ + F I + D++TWN LL E
Sbjct: 532 GVSDDGYMPNAVLDMYVRCGRMEYAWKQFFSIDQ-DVSTWNILLTGYA-----------E 579
Query: 200 DADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV-----WTHCYLLRNNL 254
+L A LF M S PNEVT ++++ ACS G +++G+ + Y ++ NL
Sbjct: 580 RGKGTL-ATELFRRMLESNVVPNEVTFISILCACSRSGMVAEGLEYYDSMKYKYSIKPNL 638
Query: 255 KLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
K +VD+ + G L A + ++
Sbjct: 639 KHY----ACVVDLLGRAGKLEDAYEFIQKI 664
>Medtr8g086560.1 | PPR containing plant protein | HC |
chr8:35911406-35914374 | 20130731
Length = 908
Score = 104 bits (260), Expect = 8e-23, Method: Composition-based stats.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 29/277 (10%)
Query: 33 LTTGLALHTY----CLSHLLTISSKLASTY--------ALTIFSSIPNPTVFLYNTLISS 80
L+ G ALH + C S + S+ L Y A +F + + T+ + ++I++
Sbjct: 312 LSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAA 371
Query: 81 FTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLE 140
+ A L++ + K ++P+ +T S+ AC S G +H++V+K
Sbjct: 372 YVREGLYSD-AIGLFDE-MQSKGVRPDIYTVTSIVHACACSSS-LDKGRDVHSYVIKN-G 427
Query: 141 PPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLED 200
+ V +L+N YAK G + +R +F +I D+ +WNT++
Sbjct: 428 MGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNL---------- 477
Query: 201 ADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFV 260
L EAL LF DMQ + +P+++T+ ++ AC+ L AL +G H ++LR + V
Sbjct: 478 --LPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHV 534
Query: 261 GTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
ALVDMY+KCG L LA LFD + +D + MI
Sbjct: 535 ACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIA 571
Score = 80.5 bits (197), Expect = 2e-15, Method: Composition-based stats.
Identities = 69/294 (23%), Positives = 132/294 (44%), Gaps = 31/294 (10%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPT 70
+LK + K+VH +L G +T ++ L+ K A +F + P
Sbjct: 201 VLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPD 260
Query: 71 VFLYNTLISS-----FTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWF 125
V +N++I+ F+ + +I + + ++ + T S+ AC G+
Sbjct: 261 VVSWNSMINGCVVNGFSGNGLEIFIQMLILG-------VEVDLTTLVSVLVACANIGN-L 312
Query: 126 QYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
G LH +K F E + +LL+ Y+K G L + +F ++ + + +W +++
Sbjct: 313 SLGRALHGFGVKACFSE---EVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSII 369
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
L +A+ LF +MQ RP+ T+ +++ AC+ +L +G
Sbjct: 370 AAYVR------------EGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGR 417
Query: 244 WTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
H Y+++N + N V AL++MY+KCG + A +F ++ +D +N MIG
Sbjct: 418 DVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 471
Score = 77.8 bits (190), Expect = 1e-14, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 29/271 (10%)
Query: 21 SLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLIS 79
SL+ + VH+ ++ G+ + + L+ + +K S A +FS IP + +NT+I
Sbjct: 412 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 471
Query: 80 SFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLK-- 137
+ S + + A L+ + K +P+ T + AC G G +H H+L+
Sbjct: 472 GY-SQNLLPNEALELF--LDMQKQFKPDDITMACVLPACAGLAA-LDKGREIHGHILRRG 527
Query: 138 FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXX 197
+ D V +L++ YAK G L +++ LFD I + DL +W ++
Sbjct: 528 YFS---DLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMH-------- 576
Query: 198 LEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNL--- 254
EA+ F +M+++ P+E + A+++ACS+ G L++G W +RN
Sbjct: 577 ----GFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEG-WKFFNSMRNECGVE 631
Query: 255 -KLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
KL + +VD+ ++ G L+ A + + +
Sbjct: 632 PKLEHY--ACVVDLLARMGNLSKAYKFIESM 660
Score = 49.3 bits (116), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
D + A L+ Y G L R +FD+I + WN L+ E A +
Sbjct: 128 DEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMS--------------EYAKI 173
Query: 204 S--LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG 261
E++ LF MQ N T ++ + LG + + H Y+L+ N V
Sbjct: 174 GNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVV 233
Query: 262 TALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+L+ Y K G + A LFD+L++ D +N+MI
Sbjct: 234 NSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMI 268
>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:10600555-10597860 | 20130731
Length = 839
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 150/292 (51%), Gaps = 24/292 (8%)
Query: 15 LLQKC-HSLNT--LKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
LL++C + NT K +H ++ T+ L L T L+ L+T+ SK A +IF S+ N
Sbjct: 58 LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSK 117
Query: 71 --VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYG 128
V Y+++IS F ++ + + A +++++L + PN + F ++ +AC G +F+ G
Sbjct: 118 RDVVSYSSIISCFANNRNCLK-AVEMFDQLLLQDGVYPNEYCFTAVIRACLKGG-FFKTG 175
Query: 129 PPLHAHVLKFLEPPYDHFVQASLLNFYAK---YGRLCVSRCLFDQISEPDLATWNTLLXX 185
L VLK V L++ + K L +R +FD++ E ++ TW ++
Sbjct: 176 LCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITR 235
Query: 186 XXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRR-PNEVTLVALISACSNLGALSQGVW 244
L + EA+ LF +M +S P+ TL LIS C+ + LS G
Sbjct: 236 ------------LAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKE 283
Query: 245 THCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H +++R+ L L+ VG +LVDMY+KCG + A ++FD + + + + A++
Sbjct: 284 LHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALV 335
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 16/273 (5%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFSSIPNPTVFLYNTLISSFTSH 84
K++H+ ++ +GL L L+ + +K A +F + V + L++ +
Sbjct: 282 KELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRG 341
Query: 85 SSQIHL-AFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPY 143
A +++ +L + PN FTF + KAC S F +G +H +K
Sbjct: 342 GGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKAC-ASLPDFDFGEQVHGQTIKLGLSAI 400
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
D V L++ YAK GR+ +R FD + E +L + + + DL
Sbjct: 401 D-CVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLN-----SEQDL 454
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTA 263
E Y+ + + T +L+S + +G + +G H +++ + + V A
Sbjct: 455 DREVEYVGSGV-------SSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNA 507
Query: 264 LVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L+ MYSKCG A Q+F+ + D + + ++I
Sbjct: 508 LISMYSKCGNKEAALQVFNDMEDCNVITWTSII 540
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 133/296 (44%), Gaps = 36/296 (12%)
Query: 15 LLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLASTYAL-----TIFSSI 66
+L+ C SL +QVH Q + GL+ + L+++ +K + +F
Sbjct: 372 VLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKN 431
Query: 67 PNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFK--ACCGSGHW 124
+ +T + F +S Q +R + + +SFT+ SL AC G+
Sbjct: 432 LVSETVVDDTNVKDFNLNSEQD------LDREVEYVGSGVSSFTYASLLSGAACIGT--- 482
Query: 125 FQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLX 184
G +HA V+K + D V +L++ Y+K G + +F+ + + ++ TW +++
Sbjct: 483 IGKGEQIHAMVVK-IGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIIN 541
Query: 185 XXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVW 244
+ +AL LF +M + +PN+VT +A++SACS++G + + W
Sbjct: 542 G------------FAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEA-W 588
Query: 245 THCYLLRNNLKL-NRFVGTA-LVDMYSKCGCLNLACQLFDQLT-DRDTFCYNAMIG 297
H +R+N + R A +VD+ + G L+ A + + + D D + +G
Sbjct: 589 KHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLG 644
>Medtr3g026690.1 | PPR containing plant-like protein | HC |
chr3:8195048-8190900 | 20130731
Length = 944
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 17/241 (7%)
Query: 57 TYALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFK 116
TYA+T+F+ + + ++NTLI+ FT + HLA ++NR+ L P+S T LF
Sbjct: 452 TYAMTLFNRMQIKDIVVWNTLINGFTKYGDP-HLALEMFNRLQLSGIL-PDSGTMVGLFS 509
Query: 117 ACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLC-VSRCLFDQISEPD 175
AC G LH + K D V+ +L++ YAK G LC V R D
Sbjct: 510 ACAIMDD-LDLGTCLHGGIEKS-GFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKD 567
Query: 176 LATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSN 235
+WN ++ S EA+ F M++ RPN VT V ++ A S
Sbjct: 568 EVSWNVMIAGYLHN------------GYSNEAISTFRRMKLENVRPNLVTFVTILPAVSY 615
Query: 236 LGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAM 295
L L + + H ++R +G +L+DMY+KCG L + + F ++ ++DT +NAM
Sbjct: 616 LSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAM 675
Query: 296 I 296
+
Sbjct: 676 L 676
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 131/289 (45%), Gaps = 49/289 (16%)
Query: 9 NHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFSSIPN 68
N+ LKL+ C +N L Q+H T F I N
Sbjct: 33 NNHYLKLINSCKYINPLLQIH-------------------------------THFLQIKN 61
Query: 69 PTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYG 128
P++ LYN+ I ++ S H A +LY+ IL L+P+ FTF + KAC S F G
Sbjct: 62 PSLILYNSFIKAY-SKFHHFHKAINLYHTILK-IGLKPDKFTFNFVLKACT-SALDFHEG 118
Query: 129 PPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXX 188
++ ++ F D ++ SL++ + K G L +R +FD++ D WN ++
Sbjct: 119 VNIYKDIV-FNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISG--- 174
Query: 189 XXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCY 248
L + EAL +F MQM ++V+++ L A S LG + H Y
Sbjct: 175 ---------LSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGY 225
Query: 249 LLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
++R + + V +L+DMY KCG ++ A ++FD++ RD + M+
Sbjct: 226 VVRRS--ICGVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMA 272
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 12/153 (7%)
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
D V ++ YAK G L +R LF + DL W+ L L +
Sbjct: 333 DIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSA------------LVETGY 380
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTA 263
E L +F MQ +P++ L L+S C+ + + G HCY ++ +++ + + T
Sbjct: 381 PREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTT 440
Query: 264 LVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
LV MY + A LF+++ +D +N +I
Sbjct: 441 LVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLI 473
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 113/279 (40%), Gaps = 35/279 (12%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSHS 85
++ ++ GL Y + L+ + K+ A +F +P +N +IS S S
Sbjct: 120 NIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGL-SQS 178
Query: 86 SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKA--------CCGSGHWFQYGPPLHAHVLK 137
A ++ R + + + + + +L A CC S +H +V++
Sbjct: 179 LNPCEALEMFWR-MQMEGFEVDKVSILNLAPAVSRLGDVGCCKS---------IHGYVVR 228
Query: 138 FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXX 197
V SL++ Y K G + ++ +FD++ D +W T++
Sbjct: 229 ---RSICGVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCY----- 280
Query: 198 LEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLN 257
E L L M+ + N+V +V + + + L +G + Y L+ L +
Sbjct: 281 -------FEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSD 333
Query: 258 RFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
V T +V MY+KCG L A +LF L RD ++A +
Sbjct: 334 IVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFL 372
>Medtr8g102760.1 | PPR containing plant-like protein | HC |
chr8:43261430-43259561 | 20130731
Length = 447
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 119/233 (51%), Gaps = 22/233 (9%)
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
NP F +N +I S+T S + A +Y +L L P+ +T P + KA S Q
Sbjct: 59 NPASFNWNNIIRSYTRLESPQN-ALRIYVSMLRAGVL-PDRYTLPIVLKAVSQS-FAIQL 115
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G +H++ +K L + + ++ +N Y K G + +FD+ EP L +WN L+
Sbjct: 116 GQQVHSYGIK-LGLQSNEYCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISG-- 172
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
L L+++A+ +F DM+ P+ +T+V+++SAC ++G L + H
Sbjct: 173 ----------LSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSACGSIGDLYLALQLHK 222
Query: 248 YLLRNNLKLNRF----VGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
Y+ + K N + + +L+DMY KCG ++LA ++F + DR+ + +MI
Sbjct: 223 YVFQ--AKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFATMEDRNVSSWTSMI 273
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 104/233 (44%), Gaps = 17/233 (7%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
+LK + + ++ +QVH+ + GL + YC S + + K A +F P
Sbjct: 103 VLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDENHEPK 162
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+ +N LIS + + A ++ + H +P+ T S+ AC G +
Sbjct: 163 LGSWNALISGLSQGGLAMD-AIVVFVDMKRHG-FEPDGITMVSVMSACGSIGDLY-LALQ 219
Query: 131 LHAHVLKFLEPPYDHFVQA-SLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXX 189
LH +V + + + + SL++ Y K GR+ ++ +F + + ++++W +++
Sbjct: 220 LHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMH 279
Query: 190 XXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG 242
+ EAL F M+ S +PN VT + ++SAC + G + +G
Sbjct: 280 GH------------AKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQEG 320
>Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5362710-5366096 | 20130731
Length = 654
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 138/293 (47%), Gaps = 28/293 (9%)
Query: 15 LLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPT 70
L+ C N+L VH +++ +GL Y + L+ + L S +A +F T
Sbjct: 80 LINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKT 139
Query: 71 VFLYNTLISSFT--SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWF--- 125
+F++N + + S + + + N I + N FT+ + KAC S
Sbjct: 140 IFVWNAIFRALAMASRGEDLLVLYGQMNWI----GIPSNRFTYTYVLKACVVSELSICPL 195
Query: 126 QYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXX 185
+ G +HAH+L+ + H V +LL+ YA++G + + +F + + ++ +W+ ++
Sbjct: 196 RKGKEIHAHILRHGYEGHVH-VMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIAC 254
Query: 186 XXXXXXXXXXXXLEDADLSLEALYLFCDMQMS--RRRPNEVTLVALISACSNLGALSQGV 243
++ ++AL LF M + PN +T+V+++ AC++L AL G
Sbjct: 255 YAKN------------EMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGK 302
Query: 244 WTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H Y+LR L V L+ MY +CG ++ ++FD + RD +N++I
Sbjct: 303 LVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLI 355
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 221 PNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQL 280
P + T LI++C +LS GV H L+ + L + ++ T L++MY G ++ AC++
Sbjct: 72 PTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKV 131
Query: 281 FDQLTDRDTFCYNAM 295
FD+ ++ F +NA+
Sbjct: 132 FDETREKTIFVWNAI 146
>Medtr4g086490.1 | PPR containing plant protein | HC |
chr4:33903624-33910415 | 20130731
Length = 1183
Score = 103 bits (258), Expect = 1e-22, Method: Composition-based stats.
Identities = 80/277 (28%), Positives = 133/277 (48%), Gaps = 29/277 (10%)
Query: 33 LTTGLALHTY----CLSHLLTISSKLASTY--------ALTIFSSIPNPTVFLYNTLISS 80
L+ G ALH + C S + S+ L Y A +F + + T+ + + I++
Sbjct: 587 LSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAA 646
Query: 81 FTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLE 140
+ A L++ + K ++P+ +T S+ AC S G +H++V+K
Sbjct: 647 YVREGLYSD-AIGLFDE-MQSKGVRPDIYTVTSIVHACACSSS-LDKGRDVHSYVIKN-G 702
Query: 141 PPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLED 200
+ V +L+N YAK G + +R +F +I D+ +WNT++
Sbjct: 703 MGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGY------------SQ 750
Query: 201 ADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFV 260
L EAL LF DMQ + +P+++T+ ++ AC+ L AL +G H ++LR + V
Sbjct: 751 NSLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHV 809
Query: 261 GTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
ALVDMY+KCG L LA LFD + +D + MI
Sbjct: 810 ACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIA 846
Score = 79.0 bits (193), Expect = 6e-15, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 29/271 (10%)
Query: 21 SLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLIS 79
SL+ + VH+ ++ G+ + + L+ + +K S A +FS IP + +NT+I
Sbjct: 687 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 746
Query: 80 SFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLK-- 137
+ S +S + A L+ + K +P+ T + AC G G +H H+L+
Sbjct: 747 GY-SQNSLPNEALELF--LDMQKQFKPDDITMACVLPACAGLAA-LDKGREIHGHILRRG 802
Query: 138 FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXX 197
+ D V +L++ YAK G L +++ LFD I + DL +W ++
Sbjct: 803 YFS---DLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMH-------- 851
Query: 198 LEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNL--- 254
EA+ F +M+++ P+E + +++ACS+ G L++G W +RN
Sbjct: 852 ----GFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEG-WKFFNSMRNECGVE 906
Query: 255 -KLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
KL + +VD+ ++ G L+ A + + +
Sbjct: 907 PKLEHY--ACVVDLLARMGNLSKAYKFIESM 935
Score = 75.1 bits (183), Expect = 8e-14, Method: Composition-based stats.
Identities = 68/294 (23%), Positives = 130/294 (44%), Gaps = 31/294 (10%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPT 70
+LK + K+VH +L G +T ++ L+ K A +F + P
Sbjct: 476 VLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPD 535
Query: 71 VFLYNTLISS-----FTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWF 125
V +N++I+ F+ + +I + + ++ + T S+ A G+
Sbjct: 536 VVSWNSMINGCVVNGFSGNGLEIFIQMLILG-------VEVDLTTLVSVLVAWANIGN-L 587
Query: 126 QYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
G LH +K F E + +LL+ Y+K G L + +F ++ + + +W + +
Sbjct: 588 SLGRALHGFGVKACFSE---EVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTI 644
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
L +A+ LF +MQ RP+ T+ +++ AC+ +L +G
Sbjct: 645 AAYVR------------EGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGR 692
Query: 244 WTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
H Y+++N + N V AL++MY+KCG + A +F ++ +D +N MIG
Sbjct: 693 DVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 746
Score = 49.3 bits (116), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 16/155 (10%)
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
D + A L+ Y G L R +FD+I + WN L+ E A +
Sbjct: 403 DEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMS--------------EYAKI 448
Query: 204 S--LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG 261
E++ LF MQ N T ++ + LG + + H Y+L+ N V
Sbjct: 449 GNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVV 508
Query: 262 TALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+L+ Y K G + A LFD+L++ D +N+MI
Sbjct: 509 NSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMI 543
>Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:4610013-4612058 | 20130731
Length = 520
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 140/295 (47%), Gaps = 27/295 (9%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSH 84
+++H+ +L TG +T LL + K S YA +F + + T+ YN +I + +
Sbjct: 57 QKIHSHILKTGFVPNTNISIKLLILYIKSHSLRYARQVFDDLHDRTLSAYNYMIGGYLKN 116
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC---CGSGHWFQYGPPLHAHVLKFLEP 141
Q+ + L+++ L+ +P+ FTF + KA +G G +HA +LKF +
Sbjct: 117 G-QVDESLDLFHQ-LSVSGEKPDGFTFSMILKASTNRVSNGMVGDLGRMVHAQILKF-DV 173
Query: 142 PYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXL--- 198
D + +L++ Y K GR+ R +FD +SE ++ + +L+ +
Sbjct: 174 EKDDVLCTALIDSYVKNGRVGYGRTVFDVMSEKNVISSTSLISGYMNKGFFDDAEYIFRK 233
Query: 199 -----------------EDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
+ ++ ++ +L ++ DMQ RPN T ++I ACS L A
Sbjct: 234 TLDKDVVVFNAMIEGYSKVSEYAMRSLEVYIDMQRLNFRPNLSTFASIIGACSVLAAFEI 293
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G L++ +G+AL+DMYSKCG + A ++FD + +++ F + +MI
Sbjct: 294 GEQVQAQLMKTPFFAVIKLGSALIDMYSKCGRVIDAQRVFDHMLEKNVFSWTSMI 348
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 107/231 (46%), Gaps = 23/231 (9%)
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS 121
IF + V ++N +I ++ S + +Y + +PN TF S+ AC
Sbjct: 230 IFRKTLDKDVVVFNAMIEGYSKVSEYAMRSLEVYID-MQRLNFRPNLSTFASIIGACSVL 288
Query: 122 GHWFQYGPPLHAHVLKFLEPPYDHFVQ--ASLLNFYAKYGRLCVSRCLFDQISEPDLATW 179
F+ G + A ++K P+ ++ ++L++ Y+K GR+ ++ +FD + E ++ +W
Sbjct: 289 AA-FEIGEQVQAQLMK---TPFFAVIKLGSALIDMYSKCGRVIDAQRVFDHMLEKNVFSW 344
Query: 180 NTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR-RPNEVTLVALISACSNLGA 238
+++ EAL LF MQ+ PN VT ++ ++AC++ G
Sbjct: 345 TSMIDGYGKN------------GFPDEALELFKKMQIEYSITPNFVTFLSALTACAHAGL 392
Query: 239 LSQGVWTHCYLLRNNLKLN-RFVGTA-LVDMYSKCGCLNLACQLFDQLTDR 287
+ +G W + + KL R A +VD+ + G LN A + ++ +R
Sbjct: 393 VERG-WEIFQSMESEYKLKPRMEHYACMVDLLGRAGWLNQAWEFVTRMPER 442
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 84/176 (47%), Gaps = 21/176 (11%)
Query: 127 YGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXX 186
+G +H+H+LK P + + LL Y K L +R +FD + + L+ +N ++
Sbjct: 55 HGQKIHSHILKTGFVPNTN-ISIKLLILYIKSHSLRYARQVFDDLHDRTLSAYNYMIGGY 113
Query: 187 XXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSN------LGALS 240
L++ + E+L LF + +S +P+ T ++ A +N +G L
Sbjct: 114 -----------LKNGQVD-ESLDLFHQLSVSGEKPDGFTFSMILKASTNRVSNGMVGDL- 160
Query: 241 QGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G H +L+ +++ + + TAL+D Y K G + +FD +++++ ++I
Sbjct: 161 -GRMVHAQILKFDVEKDDVLCTALIDSYVKNGRVGYGRTVFDVMSEKNVISSTSLI 215
>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:24361845-24364937 | 20130731
Length = 975
Score = 103 bits (258), Expect = 2e-22, Method: Composition-based stats.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 33/273 (12%)
Query: 39 LHTYCLSHLLTISSKLAST-------------YALTIFSSIPNPTVFLYNTLISSFTSHS 85
+H Y L H S +L + YA +F + + V +N LI +
Sbjct: 422 IHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNG 481
Query: 86 SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLK--FLEPPY 143
A LY ++ L+P+ FT SL AC G +H +L+ F
Sbjct: 482 FP-RKALDLY-LLMRGSGLEPDLFTIASLLSACARLKS-LSCGKEIHGSMLRNGF---EL 535
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
D F+ SL++ Y + G++ +++ FD + E +L WNT++ +
Sbjct: 536 DEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMING------------FSQNEF 583
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTA 263
+AL +F M S+ P+E++++ + ACS + AL G HC+ ++++L + FV +
Sbjct: 584 PFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCS 643
Query: 264 LVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L+DMY+KCGC+ + +FD++ + +N +I
Sbjct: 644 LIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLI 676
Score = 80.5 bits (197), Expect = 2e-15, Method: Composition-based stats.
Identities = 70/257 (27%), Positives = 127/257 (49%), Gaps = 19/257 (7%)
Query: 44 LSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHK 102
++ L+T+ S S Y + +F++ +FL+N L+S + +S A ++ +++
Sbjct: 132 ITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYL-RNSLFRDAVFVFVEMISLT 190
Query: 103 TLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLC 162
P++FT P + KAC G + + G +H LK + D FV +L+ Y K+G +
Sbjct: 191 EFVPDNFTLPCVIKACVGV-YDVRLGEAVHGFALK-TKVLSDVFVGNALIAMYGKFGFVE 248
Query: 163 VSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR--R 220
+ +FD++ + +L +WN+++ LE+ E+ LF +
Sbjct: 249 SAVKVFDKMPQRNLVSWNSVM-----------YACLENGVFE-ESYGLFKGLLNGDEGLM 296
Query: 221 PNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQL 280
P+ T+V +I C+ G + G+ H L+ L V ++L+DMYSKCG L A L
Sbjct: 297 PDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVL 356
Query: 281 FDQLTDRDTFCYNAMIG 297
FD +++ +N+MIG
Sbjct: 357 FDT-NEKNVISWNSMIG 372
Score = 77.4 bits (189), Expect = 1e-14, Method: Composition-based stats.
Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 25/283 (8%)
Query: 12 ILKLLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIP 67
I LL C L +L K++H ML G L + L+++ + A F ++
Sbjct: 505 IASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNME 564
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
+ +NT+I+ F+ + A +++++L+ K + P+ + AC +
Sbjct: 565 EKNLVCWNTMINGFSQNEFPFD-ALDMFHQMLSSK-IWPDEISIIGALGACSQVSA-LRL 621
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G LH +K + FV SL++ YAK G + S+ +FD++ TWN L+
Sbjct: 622 GKELHCFAVKSHLTEHS-FVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYG 680
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG---VW 244
+A+ LF MQ + RP+ VT +AL++AC++ G +++G +
Sbjct: 681 IHGH------------GRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLG 728
Query: 245 THCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDR 287
L KL + +VDM + G LN A +L ++L D+
Sbjct: 729 QMQSLFGIKPKLEHY--ACVVDMLGRAGRLNEALELVNELPDK 769
Score = 66.2 bits (160), Expect = 3e-11, Method: Composition-based stats.
Identities = 71/273 (26%), Positives = 124/273 (45%), Gaps = 28/273 (10%)
Query: 36 GLALHTYCLSHLLTISSKLASTY--------ALTIFSSIPNPTVFLYNTLISSFTSHSSQ 87
G AL T LS + + + L + Y A+ +F +P + +N+++ + +
Sbjct: 220 GFALKTKVLSDVF-VGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGV- 277
Query: 88 IHLAFSLYNRIL-AHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHF 146
++ L+ +L + L P+ T ++ C G + G H LK L +
Sbjct: 278 FEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGE-VRLGMVFHGLALK-LGLCGELK 335
Query: 147 VQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLE 206
V +SLL+ Y+K G LC +R LFD +E ++ +WN+++ +D D
Sbjct: 336 VNSSLLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIGGYS-----------KDRDFR-G 382
Query: 207 ALYLFCDMQMSRR-RPNEVTLVALISACSNLGALSQGVWTHCYLLRNN-LKLNRFVGTAL 264
A L MQM + + NEVTL+ ++ C + H Y LR+ ++ + V A
Sbjct: 383 AFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAF 442
Query: 265 VDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
V Y+KCG L+ A +F + + +NA+IG
Sbjct: 443 VAGYAKCGSLHYAEGVFCGMESKMVSSWNALIG 475
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 128/272 (47%), Gaps = 17/272 (6%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPTVFLYNTLISSFTSH 84
+ VH ++ G ++ L+ + +K T A ++ P + +ISS+ S
Sbjct: 272 ENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSY-SE 330
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
I A + + + ++P++ + H F G H + +K D
Sbjct: 331 KGDIESAVECFIQTI-QLDIKPDAVALIGVLHGITNPSH-FAIGCTFHGYGVKS-GLSND 387
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
V L++ Y+++ + + LF + E L TWN+++ A S
Sbjct: 388 CLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCV------------QAGKS 435
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTAL 264
+A+ LF +M M ++P+ +T+ +L+S C LG L G H Y+LRNN+++ F+GTAL
Sbjct: 436 SDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTAL 495
Query: 265 VDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+DMYSKCG L+ A ++F + D +NA+I
Sbjct: 496 IDMYSKCGRLDYAEKVFYNIKDPCLATWNAII 527
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 116/252 (46%), Gaps = 29/252 (11%)
Query: 53 KLASTYALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFP 112
K AST S PN ++F ++L + TS A ++ +IL + PN FTF
Sbjct: 2 KFASTTIPCCLRSRPNLSLF--HSLFQNATSP------ALVIFRQIL-QANVNPNEFTFS 52
Query: 113 SLFKACCGSGHWFQYGP---PLHAHVLKF--LEPPYDHF--VQASLLNFYAKYGRLCVSR 165
L KA S F + P L A ++ L+ + F V SL++ Y K G +R
Sbjct: 53 LLIKAYLSSPS-FTHCPSTAALQARQIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHAR 111
Query: 166 CLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVT 225
+FDQ+S D+ +WN L+ A+ LF DM +PN+ T
Sbjct: 112 NMFDQMSYRDVVSWNVLICGYSQNGYLY------------HAIQLFVDMLRENFKPNQTT 159
Query: 226 LVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLT 285
+V+L+ +C + QG H + ++ L+ + AL+ MY+KC L + LFD++
Sbjct: 160 IVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMD 219
Query: 286 DRDTFCYNAMIG 297
++ +N MIG
Sbjct: 220 EKSVVSWNTMIG 231
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 123/272 (45%), Gaps = 23/272 (8%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFSSIPNPTVFLYNTLISSFTSH 84
+Q+ Q L G+ + + L+ + KL +++A +F + V +N LI ++ +
Sbjct: 76 RQIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQN 135
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
H A L+ +L + +PN T SL +C FQ G +H +K D
Sbjct: 136 GYLYH-AIQLFVDML-RENFKPNQTTIVSLLPSCGCFELIFQ-GRSIHGFGIK-AGFGLD 191
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
+ +L++ YAK L S+ LFD++ E + +WNT++ L
Sbjct: 192 SHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQN------------GLF 239
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTAL 264
+A+ F +M P+ VT++ L+SA A + V HCY+++ + V T+L
Sbjct: 240 DKAILYFKEMLKEGFHPSSVTIMNLVSA----NAFPENV--HCYVVKCGFTNDASVVTSL 293
Query: 265 VDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
V +Y+K G N A QL+ +D A+I
Sbjct: 294 VCLYAKQGFTNTAKQLYKYYPTKDLITLTAII 325
>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:40624011-40626927 | 20130731
Length = 793
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 135/281 (48%), Gaps = 22/281 (7%)
Query: 21 SLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLIS 79
SL+ K++H +L + +H++ + K S A +F ++ P V + ++IS
Sbjct: 80 SLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMIS 139
Query: 80 SFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFL 139
+ S + Q + A +Y ++ P+ TF S+ KAC +G G LHAHV+K
Sbjct: 140 GY-SQNGQANDAIIMYIQMTRSGQF-PDQLTFGSVIKACYIAGD-IDLGRQLHAHVIK-- 194
Query: 140 EPPYDHFV--QASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXX 197
+ H + Q +L++ Y +G++ + +F +I DL +W T++
Sbjct: 195 -SWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQL-------- 245
Query: 198 LEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKL 256
+EALYLF D+ + +PNE ++ SACS+L L G H ++ L+
Sbjct: 246 ----GYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRR 301
Query: 257 NRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
N F G +L DMY+K G L A F Q+ + D +NA+I
Sbjct: 302 NVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIA 342
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 22/275 (8%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSH 84
KQVH + GL + + L + +K A F I NP + +N +I++F +
Sbjct: 288 KQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADN 347
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
+ A + R + H L P+S T+ SL CGS G +H++++K +D
Sbjct: 348 GDA-NEAIDFF-RQMIHIGLTPDSITYISLL-CTCGSPVRLNQGRQIHSYIVKI---GFD 401
Query: 145 HFVQA--SLLNFYAKYGRLCVSRCLFDQISE-PDLATWNTLLXXXXXXXXXXXXXXLEDA 201
+ SLL Y K L + +F IS +L +WN +L
Sbjct: 402 KEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEG-------- 453
Query: 202 DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG 261
E L+ +M S +P+ +T+ L+ C+ L +L G HCY +++ L L+ V
Sbjct: 454 ----ETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVC 509
Query: 262 TALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L+DMY+KCG L A +FD + D ++++I
Sbjct: 510 NGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLI 544
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 22/272 (8%)
Query: 22 LNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIP-NPTVFLYNTLIS 79
LN +Q+H+ ++ G + LLT+ +K + + AL +F I N + +N ++S
Sbjct: 385 LNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILS 444
Query: 80 SFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFL 139
+ Q F LY + +P+S T +L C G +H + +K
Sbjct: 445 ACL-QKKQEGETFRLYKE-MHFSGNKPDSITITTLL-GTCAELTSLGVGNQVHCYSIKS- 500
Query: 140 EPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLE 199
D V L++ YAK G L +R +FD D+ +W++L+
Sbjct: 501 GLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYA------------ 548
Query: 200 DADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWT--HCYLLRNNLKLN 257
L EAL LF M +PNEVT + +SACS++G + +G W + +
Sbjct: 549 QCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEG-WRLYKSMETEHGIPPT 607
Query: 258 RFVGTALVDMYSKCGCLNLACQLFDQLTDRDT 289
R + +VD+ ++ GCL+ A + F Q + D
Sbjct: 608 REHFSCIVDLLARAGCLHEA-ETFIQKSGLDA 638
>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:46998568-47001126 | 20130731
Length = 782
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 142/320 (44%), Gaps = 62/320 (19%)
Query: 18 KCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNT 76
K T + +HA+++ GL L + +++LL SK AS A +FS +P T F +NT
Sbjct: 22 KSRDTVTGRFIHARIIKHGLHLSVFLMNNLLNFYSKTASFNDAHRLFSEMPQRTTFSWNT 81
Query: 77 LISSFTSHSSQIHLAFSLYNRI----------------------LAHKTLQ--------P 106
L+SS+ + I A L++ I A T Q P
Sbjct: 82 LLSSY-AKGGNIETARRLFDDIPEPDSVSWTTMIVGYNQMGRFNTAIHTFQQMISDGILP 140
Query: 107 NSFTFPSLFKACCGSGHWFQYGPPLHAHVLKF----LEPPYDHFVQASLLNFYAKYGRLC 162
FTF ++ +C +G G +H+ V+K + P V SLLN Y K G
Sbjct: 141 TQFTFTNVLASCVATGS-LDIGKKVHSFVVKLGLSGVVP-----VANSLLNMYVKSGDSL 194
Query: 163 VSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXL----EDADL--------------- 203
+ +FD++ D +TWN ++ L D D+
Sbjct: 195 RVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALFDQMTDRDIISWNSIIAGYCHQGY 254
Query: 204 SLEALYLFCDM-QMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGT 262
+AL F DM + S +P++ TL +++SAC+NL +L G H Y++R ++ ++ VG
Sbjct: 255 DSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQIHAYIVRADIDISGAVGN 314
Query: 263 ALVDMYSKCGCLNLACQLFD 282
AL+ MY+K G + +A + +
Sbjct: 315 ALISMYAKSGAVEVARTIVE 334
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 116/271 (42%), Gaps = 47/271 (17%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
AL +F + + + +N++I+ + H A ++ + +L+P+ FT S+ AC
Sbjct: 227 ALALFDQMTDRDIISWNSIIAGYC-HQGYDSKALETFSDMFRSSSLKPDKFTLGSVLSAC 285
Query: 119 CGSGHWFQYGPPLHAHVLKF------------------------------LEPPYDHFVQ 148
+ G +HA++++ L + V
Sbjct: 286 ANL-ESLKLGKQIHAYIVRADIDISGAVGNALISMYAKSGAVEVARTIVELRGTSNINVI 344
Query: 149 A--SLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLE 206
A SLLN Y K G + +R +FD + D+ W ++ L +
Sbjct: 345 AFTSLLNGYVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNS------------LLKD 392
Query: 207 ALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVD 266
AL LF M RPN TL A++S S+L +L G H +R + VG AL+
Sbjct: 393 ALELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHGKQLHAIAIRLKEVSSVSVGNALIT 452
Query: 267 MYSKCGCLNLACQLFDQL-TDRDTFCYNAMI 296
MYSK GC+ A ++F+Q+ T+RDT + +MI
Sbjct: 453 MYSKSGCIKDARKVFNQICTERDTLTWTSMI 483
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 43/196 (21%)
Query: 133 AHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXX 192
AH L P F +LL+ YAK G + +R LFD I EPD +W T++
Sbjct: 64 AHRLFSEMPQRTTFSWNTLLSSYAKGGNIETARRLFDDIPEPDSVSWTTMIVGYNQMGRF 123
Query: 193 XXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRN 252
A++ F M P + T ++++C G+L G H ++++
Sbjct: 124 NT------------AIHTFQQMISDGILPTQFTFTNVLASCVATGSLDIGKKVHSFVVKL 171
Query: 253 NLK---------LNRFVGTA----------------------LVDMYSKCGCLNLACQLF 281
L LN +V + ++ M+ + G ++A LF
Sbjct: 172 GLSGVVPVANSLLNMYVKSGDSLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALF 231
Query: 282 DQLTDRDTFCYNAMIG 297
DQ+TDRD +N++I
Sbjct: 232 DQMTDRDIISWNSIIA 247
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 17/185 (9%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A IF S+ V + +I + + +S + A L+ R++ + +PNS+T ++ +
Sbjct: 362 AREIFDSLKCRDVVAWTAMIVGY-AQNSLLKDALELF-RLMISEGPRPNSYTLAAVL-SV 418
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQI-SEPDLA 177
S +G LHA ++ E V +L+ Y+K G + +R +F+QI +E D
Sbjct: 419 FSSLASLDHGKQLHAIAIRLKEVSSVS-VGNALITMYSKSGCIKDARKVFNQICTERDTL 477
Query: 178 TWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLG 237
TW +++ L L EA+ LF DM +P+ +T V ++SAC+++G
Sbjct: 478 TWTSMIIA------------LAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVG 525
Query: 238 ALSQG 242
+ QG
Sbjct: 526 LVEQG 530
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 102 bits (255), Expect = 3e-22, Method: Composition-based stats.
Identities = 82/276 (29%), Positives = 129/276 (46%), Gaps = 24/276 (8%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTI-SSKLASTYALTIFSSIPNP-TVFLYNTLISSFTSH 84
++H ++ G + H+ +HLLT S+ YA + P TV ++ LIS + +
Sbjct: 2 ELHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQN 61
Query: 85 S--SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAH-VLKFLEP 141
+ LAF+ + ++ N FTFP++ KAC G +HA V+ E
Sbjct: 62 GFHKEALLAFNE----MCTLGVKSNEFTFPTVLKACSIKKD-LNMGKKVHAMTVVSGFES 116
Query: 142 PYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDA 201
D FV +L+ YAK G+ S+ LF I EP + +WN L +
Sbjct: 117 --DAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHV------------QS 162
Query: 202 DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG 261
D E + LF M + RPNE +L +++AC+ L G H L++ L++F
Sbjct: 163 DFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSA 222
Query: 262 TALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
ALVDMY+K G + A +F ++ DT +NA+I
Sbjct: 223 NALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIA 258
Score = 84.0 bits (206), Expect = 2e-16, Method: Composition-based stats.
Identities = 79/294 (26%), Positives = 134/294 (45%), Gaps = 23/294 (7%)
Query: 8 FNHP-ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSS 65
F P +LK LN K+VHA + +G + + L+ + +K + + +F
Sbjct: 84 FTFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGM 143
Query: 66 IPNPTVFLYNTLISSFTSHSSQIHLA--FSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
I P V +N L F+ H LA L+ R++ K ++PN ++ + AC G
Sbjct: 144 ILEPGVVSWNAL---FSCHVQSDFLAETVDLFKRMVEGK-VRPNEYSLSIILNACAGLRD 199
Query: 124 WFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
G +H ++K L D F +L++ YAK GR+ + +F ++ PD +WN ++
Sbjct: 200 G-GIGRTVHGLLMK-LGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAII 257
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
E DL AL L +M+ S PN TL + + AC+ +G G
Sbjct: 258 AGCVLH---------EYNDL---ALILLNEMKKSGSCPNVFTLSSALKACAAMGLKDLGR 305
Query: 244 WTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRD-TFCYNAMI 296
H ++ + + FV L+D+YSKC ++ A + +D + +D NA+I
Sbjct: 306 QIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALI 359
Score = 73.6 bits (179), Expect = 2e-13, Method: Composition-based stats.
Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 19/289 (6%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPT 70
+LK + + KQ+H + G+ Y ++ LL K + A IF
Sbjct: 393 VLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWED 452
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+ Y ++I++++ H A LY ++ ++P+ F SL AC + Q G
Sbjct: 453 LVAYTSMITAYSQHGDA-EEALKLYLQMQV-ADIKPDPFVCSSLLNACANLSAYEQ-GKQ 509
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
LH H +KF D F SL+N YAK G + + F +I + + +W+ ++
Sbjct: 510 LHVHAIKF-GFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGG----- 563
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG-VWTHCYL 249
L EAL +F M PN +TLV+++ AC++ G +++G +
Sbjct: 564 -------LAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETME 616
Query: 250 LRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLT-DRDTFCYNAMIG 297
+ +K + ++D+ + G LN A +L + + + D + A++G
Sbjct: 617 EKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLG 665
Score = 70.5 bits (171), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 16/223 (7%)
Query: 75 NTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAH 134
N LIS + S A SL+ L H+ + N T ++ K+ S + +H
Sbjct: 356 NALISGY-SQCGDDEQAISLFFE-LHHENIDFNQTTLSTVLKSV-ASLQQIKVCKQIHTL 412
Query: 135 VLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXX 194
+K D +V SLL+ Y K + + +F++ + DL + +++
Sbjct: 413 SIK-CGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHG---- 467
Query: 195 XXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNL 254
DA+ EAL L+ MQ++ +P+ +L++AC+NL A QG H + ++
Sbjct: 468 -----DAE---EALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQLHVHAIKFGF 519
Query: 255 KLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+ F +LV+MY+KCG + A + F ++ R ++AMIG
Sbjct: 520 MSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIG 562
>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3127058-3124158 | 20130731
Length = 845
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 130/286 (45%), Gaps = 17/286 (5%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFSSIPNPT 70
IL + L K +H L G ++ LL + + A +F + N
Sbjct: 225 ILPAVADIKDLRIGKSIHGYALRLGFESKVSVINALLYMYFECGCERIARLVFEGMINKC 284
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+NT+I + + + AF+ + ++L + ++P + AC G + G
Sbjct: 285 AVSWNTMIDGY-AQIGKSEEAFATFLKML-DEGVEPTRVAIMAALTACADLGD-LERGRF 341
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+H VL+ + ++ V SLL+ Y+K R+ ++ +F+ + + TWN ++
Sbjct: 342 VHKLVLQ-KKLDFEVPVMNSLLSMYSKCKRVDLAASIFENLKKKTNVTWNAMILGYAQNG 400
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
EALYLFC MQ +P+ TLVA+I+A ++L W H +
Sbjct: 401 CVN------------EALYLFCVMQSQEVKPDCFTLVAVITALADLSVNRMAKWIHGLAI 448
Query: 251 RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
R + + +V TAL+DMY+KCG A +LFD + +R +NAMI
Sbjct: 449 RTFMDNDVYVATALIDMYAKCGATQTARKLFDMMHERHVITWNAMI 494
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 134/298 (44%), Gaps = 30/298 (10%)
Query: 7 IFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-------- 58
I+ HP LL C S L Q+ ++ TG +Y HL +KL + +
Sbjct: 17 IYKHPSPSLLDHCTSTKHLHQILPLIIKTG----SYYNDHLF--QTKLINMFFKHGSINE 70
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F ++ + LY+ ++ + +SS A Y+R + + ++P + F L +
Sbjct: 71 ASLVFDTVEHKQDVLYHAMLKGYAKNSSLCD-ALCFYHR-MQNDGVRPVVYDFAYLLQ-L 127
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
CG + G +H V+ YD F ++ FY K G + + +F+++SE DL +
Sbjct: 128 CGKKFELEKGREIHGQVI-VNGFEYDLFSMIGVMGFYVKCGEIDDAFKVFERLSEKDLVS 186
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
W +L+ AL LF MQ + + + VTLV+++ A +++
Sbjct: 187 WTSLIAGYAQNGYPK------------RALDLFYRMQEAGLKADSVTLVSILPAVADIKD 234
Query: 239 LSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L G H Y LR + V AL+ MY +CGC +A +F+ + ++ +N MI
Sbjct: 235 LRIGKSIHGYALRLGFESKVSVINALLYMYFECGCERIARLVFEGMINKCAVSWNTMI 292
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 132/286 (46%), Gaps = 37/286 (12%)
Query: 12 ILKLLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIP 67
I+ L C L L++ VH +L L ++ LL++ SK A +IF ++
Sbjct: 323 IMAALTACADLGDLERGRFVHKLVLQKKLDFEVPVMNSLLSMYSKCKRVDLAASIFENLK 382
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCG-----SG 122
T +N +I + + ++ A L+ ++ + ++P+ FT ++ A
Sbjct: 383 KKTNVTWNAMILGYAQNGC-VNEALYLFC-VMQSQEVKPDCFTLVAVITALADLSVNRMA 440
Query: 123 HWFQYGPPLHAHVLK-FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
W +H ++ F++ D +V +L++ YAK G +R LFD + E + TWN
Sbjct: 441 KW------IHGLAIRTFMDN--DVYVATALIDMYAKCGATQTARKLFDMMHERHVITWNA 492
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
++ L EA+ +F +MQ PN+ T +++ISACS+ G + +
Sbjct: 493 MIDGYGTH------------GLGKEAIDIFDNMQKEAVIPNDTTFLSVISACSHSGFVEE 540
Query: 242 GVWTHCYL-LRNNLKLNRFVG--TALVDMYSKCGCLNLACQLFDQL 284
G+ H + ++ + L + +A+VD+ + G L+ A L +++
Sbjct: 541 GL--HFFQSMKEDYGLEPSMDHYSAVVDLLGRAGKLHGAWNLIEEM 584
>Medtr3g098230.1 | PPR containing plant-like protein | HC |
chr3:44828973-44831769 | 20130731
Length = 873
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 142/290 (48%), Gaps = 18/290 (6%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSK--LASTYALTIFSSIPNP 69
+L + + +LN K VH ++ +G + T+ + L+++ +K L + A +F SI +
Sbjct: 152 VLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHK 211
Query: 70 TVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY-- 127
V +N +I+ + + + AFSL++ ++ +++PN T ++ C +
Sbjct: 212 DVVSWNAMIAGL-AENGLLKEAFSLFS-LMMKGSVKPNYATVANILPVCASFDENIAHRC 269
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G +H++VL++ E D V +LL+FY K GR + LF + DL +WNT++
Sbjct: 270 GRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYA 329
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
+ +SLE L L + VT+V+++ AC+ L L G H
Sbjct: 330 LNGEWLKSLHVFGNLVSLEMLLL-----------DSVTMVSILPACAQLDNLQAGKQVHA 378
Query: 248 YLLRNN-LKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
Y+LR+ L + G ALV Y+KCG + A F ++ +D +N+++
Sbjct: 379 YILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSIL 428
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 18/174 (10%)
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G LH++V+K H +LLN YAK G L LFDQ D WN +L
Sbjct: 62 GKCLHSYVVKQGHVSC-HVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYS 120
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRR-RPNEVTLVALISACSNLGALSQGVWTH 246
DAD+ + +F M S P+ VT+ ++ C+ G L+ G H
Sbjct: 121 RSGK-------NDADV----MKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVH 169
Query: 247 CYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQ---LFDQLTDRDTFCYNAMIG 297
Y++++ +++ F G ALV MY+KCG +AC +FD + +D +NAMI
Sbjct: 170 GYVIKSGFEMDTFAGNALVSMYAKCGL--VACDAYAVFDSIIHKDVVSWNAMIA 221
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 13/148 (8%)
Query: 150 SLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALY 209
SL++ Y G + +F +SE DL TWN ++ + D +AL
Sbjct: 531 SLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYA------------ENDCPEQALE 578
Query: 210 LFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYS 269
LF +Q +P+ VT+++LI C+ + ++ H Y++R++ + GT L+D Y+
Sbjct: 579 LFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFEDLHLKGT-LLDAYA 637
Query: 270 KCGCLNLACQLFDQLTDRDTFCYNAMIG 297
KCG + A ++F D+D + AMIG
Sbjct: 638 KCGIIGYAYKIFQSSVDKDLVMFTAMIG 665
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 128/267 (47%), Gaps = 19/267 (7%)
Query: 26 KQVHAQMLT-TGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPTVFLYNTLISSFTS 83
+Q+H+ +L L+ + LL+ K+ T A ++F ++ + +NT+I+ +
Sbjct: 271 RQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYAL 330
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPY 143
+ + + ++ +++ + L +S T S+ AC + Q G +HA++L+
Sbjct: 331 NGEWLK-SLHVFGNLVSLEMLLLDSVTMVSILPACAQLDN-LQAGKQVHAYILRHPFLFE 388
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
D +L++FYAK G + + F IS DL +WN++L L
Sbjct: 389 DTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRF-------L 441
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKL---NRFV 260
SL + L D+ RP+ VT++ +I C++L + + H Y +R+ L V
Sbjct: 442 SLLHVMLKLDI-----RPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTV 496
Query: 261 GTALVDMYSKCGCLNLACQLFDQLTDR 287
G A++D YSKCG + A ++F L+++
Sbjct: 497 GNAILDAYSKCGNIEYANKMFQNLSEK 523
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 19/230 (8%)
Query: 73 LYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLH 132
++N ++S ++ ++ + + + P+S T ++ C SG+ G +H
Sbjct: 111 IWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGN-LNGGKSVH 169
Query: 133 AHVLKFLEPPYDHFVQASLLNFYAKYGRL-CVSRCLFDQISEPDLATWNTLLXXXXXXXX 191
+V+K D F +L++ YAK G + C + +FD I D+ +WN ++
Sbjct: 170 GYVIKS-GFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMI-------- 220
Query: 192 XXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLG---ALSQGVWTHCY 248
L + L EA LF M +PN T+ ++ C++ A G H Y
Sbjct: 221 ----AGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSY 276
Query: 249 LLR-NNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+L+ L + V AL+ Y K G A LF + RD +N +I
Sbjct: 277 VLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIA 326
>Medtr7g105440.1 | PPR containing plant-like protein | HC |
chr7:42760641-42762768 | 20130731
Length = 589
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 140/288 (48%), Gaps = 27/288 (9%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST---YALTIFSSIPN 68
I LL+ C + L+QVHA ++ GL + +S+ +++++ L+ + Y+ +F+ + N
Sbjct: 18 IATLLKACKRIQHLQQVHASIIQRGLEQDQFLISNFISLANTLSISTLSYSTAVFNRVLN 77
Query: 69 PTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYG 128
P+ FL+NT I + SS S + R+ A + P+S+T+PS+ KAC G+ G
Sbjct: 78 PSTFLWNTFIRTHC-QSSFFSDTISAFIRMKAEGAV-PDSYTYPSVIKACSGTCKVL-VG 134
Query: 129 PPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXX 188
+H V + D FV +L++ Y K G + +R +FD++S+ ++ +W ++
Sbjct: 135 KSVHGSVFR-CGLDQDLFVGTTLVDMYGKCGEIGDARKVFDELSDRNVVSWTAMVVGYVT 193
Query: 189 XXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCY 248
A +EA +F +M + N + A+I +G LS
Sbjct: 194 ------------AGDVVEAKKVFDEMPLR----NVASWNAMIRGFVKVGDLSSARGVFDS 237
Query: 249 LLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ N+ T ++D Y+K G + + LF+Q ++D ++A+I
Sbjct: 238 MPEKNV----VSFTTMIDGYAKAGDMESSRFLFEQAAEKDVVAWSALI 281
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 136/303 (44%), Gaps = 32/303 (10%)
Query: 1 MKAQNPI---FNHP-ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS 56
MKA+ + + +P ++K + K VH + GL + + L+ + K
Sbjct: 106 MKAEGAVPDSYTYPSVIKACSGTCKVLVGKSVHGSVFRCGLDQDLFVGTTLVDMYGKCGE 165
Query: 57 TY-ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLF 115
A +F + + V + ++ + + + ++ L+ N ++ ++
Sbjct: 166 IGDARKVFDELSDRNVVSWTAMVVGYVTAGDVVEA-----KKVFDEMPLR-NVASWNAMI 219
Query: 116 KACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQ-ASLLNFYAKYGRLCVSRCLFDQISEP 174
+ G L + F P + V ++++ YAK G + SR LF+Q +E
Sbjct: 220 RGFVKVGD-------LSSARGVFDSMPEKNVVSFTTMIDGYAKAGDMESSRFLFEQAAEK 272
Query: 175 DLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACS 234
D+ W+ L+ +++ + + EAL +F +M+ + P+E LV+L+SA S
Sbjct: 273 DVVAWSALISGY-----------VQNGEAN-EALKVFLEMESMKVIPDEFVLVSLMSAAS 320
Query: 235 NLGALSQGVWTHCYLLRNNLKLNR-FVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYN 293
LG L Y+ +++ L + +V +ALVDM +KCG + A +LF ++ RD Y
Sbjct: 321 QLGDLKLAQRVDSYVDNSSIDLQQDYVISALVDMNAKCGNMERALKLFREMPKRDLVSYC 380
Query: 294 AMI 296
+MI
Sbjct: 381 SMI 383
>Medtr1g067280.1 | PPR containing plant-like protein | HC |
chr1:28986458-28983697 | 20130731
Length = 684
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 15/275 (5%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSH 84
KQ+HA+ + + + L+T +K A +F IP+ F +N++I ++TS
Sbjct: 69 KQLHARFFPFAITPDNFIATKLITFYAKSNLIRNARNVFDKIPHKNSFSWNSMIIAYTS- 127
Query: 85 SSQIHLAFSLYNRILA--HKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPP 142
S + A SL+ ++ + P++FT S+ K S Y H L
Sbjct: 128 KSLFNDALSLFASFVSSTDNNVSPDNFTMTSILKTLALSSS-VCYKSAKQIHCSALLRGF 186
Query: 143 Y-DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDA 201
Y D V +L+ Y + GR+ ++R +FD+++E D+ TWN ++ L
Sbjct: 187 YSDVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQSGFYEECKRLYLE 246
Query: 202 DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG 261
L LE + PN VT+ +++ AC LS G+ H ++ + ++ + F+
Sbjct: 247 MLGLEGKGIL---------PNAVTIGSVMQACGQSKDLSFGMEVHRFMKDDGIETDVFLC 297
Query: 262 TALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
A++ MY+KCG LN A +LFD++ ++D Y ++I
Sbjct: 298 NAIIAMYAKCGSLNYARELFDEMGEKDEVSYRSII 332
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 134/314 (42%), Gaps = 35/314 (11%)
Query: 12 ILKLLQKCHSL--NTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPN 68
ILK L S+ + KQ+H L G L+ L+T + A +F +
Sbjct: 159 ILKTLALSSSVCYKSAKQIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKVFDEMTE 218
Query: 69 PTVFLYNTLISSFTSHSSQIHLAFSLYNRILA--HKTLQPNSFTFPSLFKACCGSGHWFQ 126
+ +N +I + S S LY +L K + PN+ T S+ +AC G
Sbjct: 219 RDIVTWNAMIGGY-SQSGFYEECKRLYLEMLGLEGKGILPNAVTIGSVMQAC-GQSKDLS 276
Query: 127 YGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXX 186
+G +H +K D F+ +++ YAK G L +R LFD++ E D ++ +++
Sbjct: 277 FGMEVH-RFMKDDGIETDVFLCNAIIAMYAKCGSLNYARELFDEMGEKDEVSYRSIISGY 335
Query: 187 X----XXXXXXXXXXLEDADLSL---------------EALYLFCDMQMS--RRRPNEVT 225
+E+ LS AL L +M +PN VT
Sbjct: 336 MINGFVDEALDVLKGIENPGLSTWNDVIPGMVQNNQFERALDLVREMPGFGLNLKPNVVT 395
Query: 226 LVALI---SACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFD 282
L ++I S SNL L + H Y +R + N +V TA+VD Y+K G ++LA ++FD
Sbjct: 396 LSSIIPLFSYFSNLRGLKE---VHGYAIRRSYDQNIYVATAIVDSYAKLGFIHLARRVFD 452
Query: 283 QLTDRDTFCYNAMI 296
Q R + ++I
Sbjct: 453 QSQSRSLIIWTSII 466
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 18/184 (9%)
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
C + + G LHA F P D+F+ L+ FYAK + +R +FD+I + +
Sbjct: 59 CTNHRLIRQGKQLHARFFPFAITP-DNFIATKLITFYAKSNLIRNARNVFDKIPHKNSFS 117
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRR---PNEVTLVALIS--AC 233
WN+++ L +AL LF S P+ T+ +++ A
Sbjct: 118 WNSMIIAYTS------------KSLFNDALSLFASFVSSTDNNVSPDNFTMTSILKTLAL 165
Query: 234 SNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYN 293
S+ HC L + V ALV Y +CG + +A ++FD++T+RD +N
Sbjct: 166 SSSVCYKSAKQIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWN 225
Query: 294 AMIG 297
AMIG
Sbjct: 226 AMIG 229
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 17/180 (9%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
I+ L +L LK+VH + + Y + ++ +KL + A +F + +
Sbjct: 399 IIPLFSYFSNLRGLKEVHGYAIRRSYDQNIYVATAIVDSYAKLGFIHLARRVFDQSQSRS 458
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSG----HW-- 124
+ ++ ++I ++ SH LA LYN++L + +QP+ T S+ AC SG W
Sbjct: 459 LIIWTSIIYAYASHGDA-SLALGLYNQML-DRGIQPDPVTLTSVLTACAHSGLVNEAWDV 516
Query: 125 FQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQIS-EPDLATWNTLL 183
F P H ++P +H+ A ++ ++ G+L + ++ EP W LL
Sbjct: 517 FNAMPSKHG-----IQPVVEHY--ACMVGVLSRAGKLSEAEKFISKMPFEPTAKVWGALL 569
>Medtr5g038580.1 | PPR containing plant-like protein | HC |
chr5:16954387-16952525 | 20130731
Length = 620
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 140/300 (46%), Gaps = 33/300 (11%)
Query: 8 FNHPILKLLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSKLAST----YAL 60
F PIL L+ C +L++ Q +HA + TG H + + L I+S A+T YAL
Sbjct: 36 FTFPIL--LKACSNLSSPSQTQILHAHLFKTGFHSHPHTSTAL--IASYAANTRSFHYAL 91
Query: 61 TIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKA--C 118
+F +P PT+ +N ++S + + + + R + ++PNS T SL A
Sbjct: 92 ELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLF--RQIGFWNIRPNSVTIVSLLSARDV 149
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
H Q +H K L YD +V SL+ Y+K G L S +F+ + ++ T
Sbjct: 150 KNQSHVQQ----VHCLACK-LGVEYDVYVSTSLVTAYSKCGVLVSSNKVFENLRVKNVVT 204
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMS-RRRPNEVTLVALISACSNLG 237
+N + L +F DM M+ +PN+VTLV+++SAC+ L
Sbjct: 205 YNAFMSG------------LLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSVVSACATLS 252
Query: 238 ALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+ G H ++ + V T+LVDMYSKCGC A +F + R+ +N+MI
Sbjct: 253 NIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGSAFDVFSRSEKRNLITWNSMIA 312
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 121/299 (40%), Gaps = 29/299 (9%)
Query: 25 LKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTS 83
++QVH G+ Y + L+T SK + +F ++ V YN +S
Sbjct: 155 VQQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNKVFENLRVKNVVTYNAFMSGLLQ 214
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPY 143
+ + F ++ + + +PN T S+ AC + + G +H +K LE
Sbjct: 215 NGFH-RVVFDVFKDMTMNLEEKPNKVTLVSVVSACATLSN-IRLGKQVHGLSMK-LEACD 271
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXL----- 198
V SL++ Y+K G + +F + + +L TWN+++ L
Sbjct: 272 HVMVVTSLVDMYSKCGCWGSAFDVFSRSEKRNLITWNSMIAGMMMNSESERAVELFERMV 331
Query: 199 ------------------EDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALS 240
+ +EA F MQ + P L +L+S C + L
Sbjct: 332 DEGILPDSATWNSLISGFAQKGVCVEAFKYFSKMQCAGVAPCLKILTSLLSVCGDSCVLR 391
Query: 241 QGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDR--DTFCYNAMIG 297
H Y LR + + F+ TALVD Y KCGC++ A +FDQ + D +NAMIG
Sbjct: 392 SAKAIHGYALRICVDKDDFLATALVDTYMKCGCVSFARFVFDQFDVKPDDPAFWNAMIG 450
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 14/191 (7%)
Query: 106 PNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSR 165
PN+FTFP L KAC Q LHAH+ K + H A + ++ A +
Sbjct: 33 PNTFTFPILLKACSNLSSPSQT-QILHAHLFKTGFHSHPHTSTALIASYAANTRSFHYAL 91
Query: 166 CLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVT 225
LFD++ +P + +N +L L +A++LF + RPN VT
Sbjct: 92 ELFDEMPQPTITAFNAVL------------SGLSRNGPRGQAVWLFRQIGFWNIRPNSVT 139
Query: 226 LVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLT 285
+V+L+SA ++ S HC + ++ + +V T+LV YSKCG L + ++F+ L
Sbjct: 140 IVSLLSA-RDVKNQSHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNKVFENLR 198
Query: 286 DRDTFCYNAMI 296
++ YNA +
Sbjct: 199 VKNVVTYNAFM 209
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 131/326 (40%), Gaps = 55/326 (16%)
Query: 12 ILKLLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIP 67
++ ++ C +L+ + KQVH + H ++ L+ + SK A +FS
Sbjct: 241 LVSVVSACATLSNIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGSAFDVFSRSE 300
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSL------------- 114
+ +N++I+ +S + A L+ R++ L P+S T+ SL
Sbjct: 301 KRNLITWNSMIAGMMMNS-ESERAVELFERMVDEGIL-PDSATWNSLISGFAQKGVCVEA 358
Query: 115 FK---------------------ACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLN 153
FK + CG + +H + L+ D F+ +L++
Sbjct: 359 FKYFSKMQCAGVAPCLKILTSLLSVCGDSCVLRSAKAIHGYALRICVDK-DDFLATALVD 417
Query: 154 FYAKYGRLCVSRCLFDQ--ISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLF 211
Y K G + +R +FDQ + D A WN ++ D + + E Y
Sbjct: 418 TYMKCGCVSFARFVFDQFDVKPDDPAFWNAMIGGYGTNG---------DYESAFEVFYEM 468
Query: 212 CDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKC 271
D + +PN T V+++SACS+ G + +G+ + + L +VD+ +
Sbjct: 469 LDEMV---QPNSATFVSVLSACSHSGQIERGLRFFRMIRKYGLDPKPEHFGCVVDLLGRA 525
Query: 272 GCLNLACQLFDQLTDRDTFCYNAMIG 297
G L A L +L + +++++G
Sbjct: 526 GQLGEARDLVQELAEPPASVFDSLLG 551
>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 131/295 (44%), Gaps = 28/295 (9%)
Query: 16 LQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTV 71
++ C SL L KQ+H Q G + S L+ + SK A +F IP V
Sbjct: 93 IKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNV 152
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRILAHKT----LQPNSFTFPSLFKAC----CGSGH 123
+ ++IS + + F +L +T + S+ C C
Sbjct: 153 VSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVC 212
Query: 124 WFQYGPPLHA-HVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTL 182
+H V K E V +L++ YAK G + VSR +FD + E D+ +WN+L
Sbjct: 213 VKSVTECVHGLAVKKGFEGCL--AVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSL 270
Query: 183 LXXXXXXXXXXXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACSNLGALSQ 241
+ LS+EA LF DM + R N VTL A++ AC++ GAL
Sbjct: 271 IAVYAQN------------GLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQI 318
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G H +++ L+ N VGT++VDMY KCG + +A + FD+L ++ + M+
Sbjct: 319 GKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMV 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 114/244 (46%), Gaps = 31/244 (12%)
Query: 66 IPNPTVFLYNTLISSF--TSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
+ +V+ +N++I+ F + S Q AFS ++ +L PN TFP K+C S +
Sbjct: 46 VDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKL----SLHPNRSTFPCTIKSC-SSLY 100
Query: 124 WFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
G +H F D FV ++L++ Y+K G L +R LFD+I E ++ +W +++
Sbjct: 101 DLCAGKQIHQQAFVFGYGS-DIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMI 159
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCD-----------MQMSRRRPNEVTLVALISA 232
+ + EA++LF + + + V L +ISA
Sbjct: 160 SGYVQN------------ERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISA 207
Query: 233 CSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCY 292
C+ + S H ++ + VG L+D Y+KCG ++++ ++FD + + D +
Sbjct: 208 CARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSW 267
Query: 293 NAMI 296
N++I
Sbjct: 268 NSLI 271
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 130/289 (44%), Gaps = 28/289 (9%)
Query: 13 LKLLQKC-HSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFSSIPNPTV 71
+K + +C H L K + + Y +++S K +F + V
Sbjct: 213 VKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRK--------VFDGMEETDV 264
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPL 131
+N+LI+ + + + AFSL++ ++ ++ N+ T ++ AC SG Q G +
Sbjct: 265 CSWNSLIAVYAQNGLSVE-AFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGA-LQIGKCI 322
Query: 132 HAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXX 191
H V+K +E + V S+++ Y K GR+ ++R FD++ ++ +W ++
Sbjct: 323 HDQVVK-MELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGH 381
Query: 192 XXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLR 251
EA+ +F +M +PN +T V++++ACS+ G L +G W ++
Sbjct: 382 ------------GKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEG-WHWFNKMK 428
Query: 252 NNLKLNRFVG--TALVDMYSKCGCLNLACQLFDQLTDR-DTFCYNAMIG 297
+ + + +VD+ + G L A L ++ + D + +++G
Sbjct: 429 CEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLG 477
>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 131/295 (44%), Gaps = 28/295 (9%)
Query: 16 LQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTV 71
++ C SL L KQ+H Q G + S L+ + SK A +F IP V
Sbjct: 93 IKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNV 152
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRILAHKT----LQPNSFTFPSLFKAC----CGSGH 123
+ ++IS + + F +L +T + S+ C C
Sbjct: 153 VSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVC 212
Query: 124 WFQYGPPLHA-HVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTL 182
+H V K E V +L++ YAK G + VSR +FD + E D+ +WN+L
Sbjct: 213 VKSVTECVHGLAVKKGFEGCL--AVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSL 270
Query: 183 LXXXXXXXXXXXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACSNLGALSQ 241
+ LS+EA LF DM + R N VTL A++ AC++ GAL
Sbjct: 271 IAVYAQN------------GLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQI 318
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G H +++ L+ N VGT++VDMY KCG + +A + FD+L ++ + M+
Sbjct: 319 GKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMV 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 114/244 (46%), Gaps = 31/244 (12%)
Query: 66 IPNPTVFLYNTLISSF--TSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
+ +V+ +N++I+ F + S Q AFS ++ +L PN TFP K+C S +
Sbjct: 46 VDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKL----SLHPNRSTFPCTIKSC-SSLY 100
Query: 124 WFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
G +H F D FV ++L++ Y+K G L +R LFD+I E ++ +W +++
Sbjct: 101 DLCAGKQIHQQAFVFGYGS-DIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMI 159
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCD-----------MQMSRRRPNEVTLVALISA 232
+ + EA++LF + + + V L +ISA
Sbjct: 160 SGYVQN------------ERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISA 207
Query: 233 CSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCY 292
C+ + S H ++ + VG L+D Y+KCG ++++ ++FD + + D +
Sbjct: 208 CARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSW 267
Query: 293 NAMI 296
N++I
Sbjct: 268 NSLI 271
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 130/289 (44%), Gaps = 28/289 (9%)
Query: 13 LKLLQKC-HSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFSSIPNPTV 71
+K + +C H L K + + Y +++S K +F + V
Sbjct: 213 VKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRK--------VFDGMEETDV 264
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPL 131
+N+LI+ + + + AFSL++ ++ ++ N+ T ++ AC SG Q G +
Sbjct: 265 CSWNSLIAVYAQNGLSVE-AFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGA-LQIGKCI 322
Query: 132 HAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXX 191
H V+K +E + V S+++ Y K GR+ ++R FD++ ++ +W ++
Sbjct: 323 HDQVVK-MELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGH 381
Query: 192 XXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLR 251
EA+ +F +M +PN +T V++++ACS+ G L +G W ++
Sbjct: 382 ------------GKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEG-WHWFNKMK 428
Query: 252 NNLKLNRFVG--TALVDMYSKCGCLNLACQLFDQLTDR-DTFCYNAMIG 297
+ + + +VD+ + G L A L ++ + D + +++G
Sbjct: 429 CEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLG 477
>Medtr5g094220.1 | PPR containing plant-like protein | HC |
chr5:41149037-41146758 | 20130731
Length = 759
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 94/181 (51%), Gaps = 16/181 (8%)
Query: 117 ACCGSGHWFQYGPPLHAHVLK-FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPD 175
A CG G +H +V+K F++ V SL+ Y K ++ VS +F++ SE D
Sbjct: 424 ASCGQLGEINLGRSIHCNVIKGFVDETIS--VTNSLIEMYGKCDKMNVSWRIFNR-SERD 480
Query: 176 LATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSN 235
+ WN L+ EA+ LF M M + PN TLV ++SACS+
Sbjct: 481 VILWNALISAHIHVKHYE------------EAISLFDIMIMEDQNPNTATLVVVLSACSH 528
Query: 236 LGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAM 295
L L +G H Y+ KLN +GTALVDMY+KCG L + ++FD + ++D C+NAM
Sbjct: 529 LAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAM 588
Query: 296 I 296
I
Sbjct: 589 I 589
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 134/286 (46%), Gaps = 13/286 (4%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFSSIPNPT 70
++ L ++ +L +L HA +TTG + + + + L+++ L T + T+F S+P
Sbjct: 15 LISLSKRITTLQSLLPFHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKD 74
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
FL+N+ + + S S ++ F + ++ + + PN FTFP + + + G
Sbjct: 75 TFLWNSFLKTLFSRS--LYPQFLSFYSLMRSENVLPNHFTFP-MVASSYAHFMMIRSGMN 131
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
LHA K P + V +S ++ Y++ + + +FD+I D+ W L+
Sbjct: 132 LHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNG 191
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
++++ LE + + ++PN TL AC NLG L G H ++
Sbjct: 192 ---------ESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVV 242
Query: 251 RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+N + + ++++ MY KCG A Q F ++ ++D + +MI
Sbjct: 243 KNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMI 288
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G H +++ P D V SLL+ Y K+G L + LF Q S+ + WN ++
Sbjct: 335 GKAFHGLIIRRHYAP-DEMVDNSLLSMYCKFGMLSFAERLF-QRSQGSIEYWNFMIVGYG 392
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
+++ + LF +MQ R V +V+ I++C LG ++ G HC
Sbjct: 393 RIGK------------NVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHC 440
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+++ + V +L++MY KC +N++ ++F++ ++RD +NA+I
Sbjct: 441 NVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNR-SERDVILWNALI 488
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 24/214 (11%)
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
V L+N LIS+ H A SL++ I+ + PN+ T + AC + + G
Sbjct: 481 VILWNALISAHI-HVKHYEEAISLFD-IMIMEDQNPNTATLVVVLSACSHLA-FLEKGER 537
Query: 131 LHAHV----LKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXX 186
LH ++ K P + +L++ YAK G+L SR +FD + E D+ WN ++
Sbjct: 538 LHRYINEKGFKLNLP-----LGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGY 592
Query: 187 XXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTH 246
+ A+ +F M+ S +PNE+T ++L+SAC++ G + +G
Sbjct: 593 GMN------------GYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVF 640
Query: 247 CYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQL 280
+ ++K N T +VD+ + L A +L
Sbjct: 641 AKMQSYSVKPNLKHYTCMVDLLGRSCNLEEAEEL 674
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 121/302 (40%), Gaps = 45/302 (14%)
Query: 1 MKAQNPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTY-CLSHLLTISSKLASTY- 58
M+++N + NH ++ ++ H M+ +G+ LH C +S + S++
Sbjct: 101 MRSENVLPNHFTFPMVASSYA-------HFMMIRSGMNLHALACKVGFFPENSAVGSSFV 153
Query: 59 -----------ALTIFSSIPNPTVFLYNTLISSFTSHS-SQIHLAFSLYNRILAHKTLQP 106
A+ +F IP V + L+ + + S++ L + + +P
Sbjct: 154 SLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKP 213
Query: 107 NSFTFPSLFKACCGSGHWFQYGPPLHAHVLK-----FLEPPYDHFVQASLLNFYAKYGRL 161
N+ T F AC G G LH V+K L+ +Q+S+L+ Y K G
Sbjct: 214 NARTLEGGFLACGNLGDLVS-GRCLHGLVVKNGIGCLLD------IQSSVLSMYCKCGVP 266
Query: 162 CVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRP 221
+ F ++ DL +W +++ + + F +M ++ P
Sbjct: 267 REAYQSFSEVINKDLLSWTSMIRVYARFGMMS------------DCVRFFWEMLENQVCP 314
Query: 222 NEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLF 281
+ + + ++S N + G H ++R + + V +L+ MY K G L+ A +LF
Sbjct: 315 DGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLF 374
Query: 282 DQ 283
+
Sbjct: 375 QR 376
>Medtr4g074470.1 | PPR containing plant-like protein | HC |
chr4:28370337-28367680 | 20130731
Length = 542
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 155/352 (44%), Gaps = 73/352 (20%)
Query: 15 LLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISS-----KLASTYALTIFSSIPNP 69
LL K S++ LKQ+ A + +GL H + L+ S+ L+ Y+L SSI
Sbjct: 12 LLNKLSSISELKQLQAIITKSGLHSHIPLTTKLIFFSALSPFGNLSHAYSLFQHSSILIH 71
Query: 70 TVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY-- 127
F+ NT+I +F SHS A +YN++L + + +S+T + KAC + Q
Sbjct: 72 NPFISNTMIRAF-SHSCFPLQALLIYNQMLINNVV-SDSYTCNFVLKACSRAYKLIQESG 129
Query: 128 -------------GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEP 174
G +H V+K + D VQ SLL FY++ G + V+R LFDQI +
Sbjct: 130 SCDDDNLVVVYNKGTEIHCRVIK-IGFQNDPSVQNSLLYFYSQCGLVSVARHLFDQIKDT 188
Query: 175 DLAT-------------------------------WNTLLXXXXXXXXXXXXXXL----- 198
L + WNTL+ +
Sbjct: 189 SLVSWNIMISAYDLVNDYESADYLLELMPCKTVVSWNTLIARYIRLGDVQAARRVFGCMP 248
Query: 199 EDADLSLE--------------ALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVW 244
E +S AL LF +MQ + +P EVTL++++ AC+ GAL G
Sbjct: 249 ERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEIGHK 308
Query: 245 THCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ L K+ ++G ALV+MY KCG L+LA ++F+ + + C+NAM+
Sbjct: 309 IYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAMV 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 99/227 (43%), Gaps = 20/227 (8%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F +P +N++I+ S A L++ + + ++P T S+ AC
Sbjct: 240 ARRVFGCMPERNAVSWNSMIAGCVSVRDYAG-ALELFSE-MQNAGVKPTEVTLISILGAC 297
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
+G + G ++ LK E + ++ +L+N Y K G L ++ +F+ + ++
Sbjct: 298 AETGA-LEIGHKIYES-LKVCEHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSC 355
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMS---RRRPNEVTLVALISACSN 235
WN ++ L E LF +M+ S RP+ VT + ++ ACS+
Sbjct: 356 WNAMV------------IGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSH 403
Query: 236 LGALSQGVWTHCYLL-RNNLKLNRFVGTALVDMYSKCGCLNLACQLF 281
G + + W +++ R + + +VD+ S+ G L A Q+
Sbjct: 404 KGLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLLSRWGLLEEAYQII 450
>Medtr8g098250.1 | PPR containing plant-like protein | HC |
chr8:40970486-40967324 | 20130731
Length = 998
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 20/287 (6%)
Query: 15 LLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
+L C SL L +QVHA + + + + L+ + +K S T A +F+ +
Sbjct: 349 VLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAID 408
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+ YN +I + S ++ A L+ R + P F SL S + +
Sbjct: 409 LVSYNAMIEGY-SRQDKLCEALDLF-REMRLSLSSPTLLIFVSLL-GVSASLYHLELSNQ 465
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+H ++K+ D F ++L++ Y+K R+ +R +F++I + D+ W +
Sbjct: 466 IHGLIIKY-GVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQS 524
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
E+L L+ +QMSR +PNE T A+I+A SN+ +L G H ++
Sbjct: 525 ENE------------ESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVI 572
Query: 251 RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+ + FV LVDMY+K G + A + F +DT C+N+MI
Sbjct: 573 KMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIA 619
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 132/276 (47%), Gaps = 21/276 (7%)
Query: 26 KQVHAQMLTTGLALHT-YCLSHLLTISSKLA-STYALTIFSSIPNPTVFLYNTLISSFTS 83
K++H++++ G H + ++ LL SKL +A +F ++ + + +++++S +T
Sbjct: 58 KKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTH 117
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPY 143
HS + A L+ + + +PN + S+ +AC G P L H L ++ Y
Sbjct: 118 HSHCLE-ALMLFVQFMRSCNEKPNEYILASVVRACTQFG---GLNPALQIHGL-VVKGGY 172
Query: 144 --DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDA 201
D +V SL++FY K+ + +R LFD + TW T++
Sbjct: 173 VQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGR---------- 222
Query: 202 DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG 261
S +L LF M+ P++ L +++SAC L L G HCY+LR+ + ++ +
Sbjct: 223 --SQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMV 280
Query: 262 TALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+D Y KC + L +LFD++ D++ + +I
Sbjct: 281 NGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIA 316
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 128/277 (46%), Gaps = 17/277 (6%)
Query: 21 SLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLIS 79
LN Q+H ++ G Y + L+ +K A A +F + T F + T+I+
Sbjct: 156 GLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIA 215
Query: 80 SFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFL 139
+ S + ++ L+++ + + P+ + S+ AC + + G +H +VL+
Sbjct: 216 GY-SKQGRSQVSLKLFDQ-MKEGHVCPDKYVLSSVLSACLML-KFLEGGKQIHCYVLRS- 271
Query: 140 EPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLE 199
D + ++FY K ++ + R LFD++ + ++ +W T++
Sbjct: 272 GIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNS--------- 322
Query: 200 DADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRF 259
+AL LF +M P+ +++++C +L AL +G H Y ++ N+ + F
Sbjct: 323 ---FHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDF 379
Query: 260 VGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
V L+DMY+KC L A ++F+ + D YNAMI
Sbjct: 380 VKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMI 416
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 21/219 (9%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSHS 85
Q+H ++ G++L + S L+ + SK + A +F I + + ++ + S +T S
Sbjct: 465 QIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQS 524
Query: 86 SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLK--FLEPPY 143
+ LY + L L+PN FTF ++ A ++G H V+K F + P
Sbjct: 525 EN-EESLKLY-KCLQMSRLKPNEFTFAAVITAASNIAS-LRHGQQFHNQVIKMGFDDDP- 580
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
FV +L++ YAK G + + F + D A WN+++
Sbjct: 581 --FVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAE---------- 628
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG 242
+AL +F DM M +PN VT V ++SACS+ G L G
Sbjct: 629 --KALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLG 665
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 20/289 (6%)
Query: 12 ILKLLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIP 67
+ LL C S+ L KQ H+ + G+ LL + K + A F +
Sbjct: 388 VASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLACE 447
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
V L+N ++ + ++ +F ++ ++ + PN FT+PS+ K C G
Sbjct: 448 TENVVLWNVMLVGY-GQLDNLNKSFQIFTQMQIEGIV-PNQFTYPSILKTCTTLGAT-DL 504
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G +H VLK ++ +V + L++ YAK+G+L + +F ++ E D+ +W ++
Sbjct: 505 GEQIHTQVLK-TGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYT 563
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
D EAL LF +MQ + + + + ISAC+ + AL QG H
Sbjct: 564 QH------------DKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHA 611
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ + +G ALV +Y++CG + A FDQ+ +D +N+++
Sbjct: 612 QSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLV 660
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 17/272 (6%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSH 84
KQ+H +L G + TY + L+T+ S+ + + A IF + YN+LIS +
Sbjct: 304 KQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGL-AQ 362
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
I+ A +L+ + + +P+ T SL AC G G H++ +K D
Sbjct: 363 QGYINRALALFKK-MNLDCQKPDCVTVASLLSACASVGA-LPNGKQFHSYAIK-AGMTSD 419
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
V+ SLL+ Y K + + F ++ WN +L L++ + S
Sbjct: 420 IVVEGSLLDLYVKCSDIKTAHEFFLACETENVVLWNVMLVGYGQ---------LDNLNKS 470
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTAL 264
+ +F MQ+ PN+ T +++ C+ LGA G H +L+ + N +V + L
Sbjct: 471 FQ---IFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVL 527
Query: 265 VDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+DMY+K G L+ A ++F +L + D + AMI
Sbjct: 528 IDMYAKHGKLDHALKIFRRLKENDVVSWTAMI 559
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 131/292 (44%), Gaps = 20/292 (6%)
Query: 8 FNHP-ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSS 65
F +P ILK + + +Q+H Q+L TG + Y S L+ + +K +AL IF
Sbjct: 487 FTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRR 546
Query: 66 IPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWF 125
+ V + +I+ +T H + A +L+ + + ++ ++ F S AC G
Sbjct: 547 LKENDVVSWTAMIAGYTQHD-KFTEALNLFKE-MQDQGIKSDNIGFASAISACAGI-QAL 603
Query: 126 QYGPPLHAHVLKFLEPPYDHF-VQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLX 184
G +HA L D + +L++ YA+ G++ + FDQI D +WN+L+
Sbjct: 604 DQGRQIHAQSC--LSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVS 661
Query: 185 XXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVW 244
+ EAL +F M + N T + +SA +N+ + G
Sbjct: 662 G------------FAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQ 709
Query: 245 THCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H + + V AL+ +Y+KCG ++ A + F ++ D++ +N+MI
Sbjct: 710 IHGMIRKTGYDSETEVSNALITLYAKCGTIDDAERHFFEMPDKNEISWNSMI 761
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 140/304 (46%), Gaps = 26/304 (8%)
Query: 1 MKAQNPIFNHPILKLLQKCHSLNTL-----KQVHAQMLTTGLALHTYCLSHLLTISSKLA 55
M +N F+ I ++ + S N + +Q+HA+ +T+G T+ + L+ + K
Sbjct: 173 MLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNG 232
Query: 56 S-TYALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSL 114
+ A +F ++ + +IS + + + A L+ + + + P + F S+
Sbjct: 233 FLSSAKKVFENLKARDSVSWVAMISGLSQNGYE-EEAMLLFCQ-MHTSGICPTPYIFSSV 290
Query: 115 FKACCGSGHWFQYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQIS 172
AC +F++G LH VLK F Y V +L+ Y++ G L + +F +S
Sbjct: 291 LSACTKV-EFFEFGKQLHGLVLKQGFSSETY---VCNALVTLYSRSGNLSSAEQIFHCMS 346
Query: 173 EPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISA 232
+ D ++N+L+ L AL LF M + ++P+ VT+ +L+SA
Sbjct: 347 QRDRVSYNSLI------------SGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSA 394
Query: 233 CSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCY 292
C+++GAL G H Y ++ + + V +L+D+Y KC + A + F + +
Sbjct: 395 CASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLACETENVVLW 454
Query: 293 NAMI 296
N M+
Sbjct: 455 NVML 458
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 109/240 (45%), Gaps = 19/240 (7%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A+ +F +P ++ +N + ++F + + L+ R+L K ++ + F + + C
Sbjct: 135 AVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVP-GLFRRMLT-KNVEFDERIFAVVLRGC 192
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDH--FVQASLLNFYAKYGRLCVSRCLFDQISEPDL 176
G+ F++ +HA K + ++ F+ L++ Y K G L ++ +F+ + D
Sbjct: 193 SGNAVSFRFVEQIHA---KTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDS 249
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
+W ++ L EA+ LFC M S P +++SAC+ +
Sbjct: 250 VSWVAMISG------------LSQNGYEEEAMLLFCQMHTSGICPTPYIFSSVLSACTKV 297
Query: 237 GALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G H +L+ +V ALV +YS+ G L+ A Q+F ++ RD YN++I
Sbjct: 298 EFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLI 357
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 35/234 (14%)
Query: 20 HSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYA--------LTIFSSIPNPTV 71
+L+ +Q+HAQ +G S L+I + L S YA F I
Sbjct: 601 QALDQGRQIHAQSCLSGY-------SDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDN 653
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPL 131
+N+L+S F + S A +++ + + L+ NSFTF S A + + G +
Sbjct: 654 VSWNSLVSGF-AQSGYFEEALNIFAQ-MNKAGLEINSFTFGSAVSAAANIAN-VRIGKQI 710
Query: 132 HAHVLKFLEPPYDHFVQAS--LLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXX 189
H + K YD + S L+ YAK G + + F ++ + + +WN+++
Sbjct: 711 HGMIRK---TGYDSETEVSNALITLYAKCGTIDDAERHFFEMPDKNEISWNSMITGYSQH 767
Query: 190 XXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
EAL LF DM+ PN VT V ++SACS++G + +G+
Sbjct: 768 ------------GCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGI 809
>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:34908078-34912174 | 20130731
Length = 1099
Score = 100 bits (250), Expect = 1e-21, Method: Composition-based stats.
Identities = 85/289 (29%), Positives = 139/289 (48%), Gaps = 23/289 (7%)
Query: 11 PILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNP 69
PILK C SL K+VH + G + + L+ + S+ A +F +P
Sbjct: 129 PILK---ACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVK 185
Query: 70 TVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGP 129
V +N +IS F + + A + NR + + ++ ++ T S+ C S G
Sbjct: 186 DVGSWNAMISGFCQNGNAAG-ALGVLNR-MKGEGVKMDTITVASILPVCAQSDDVIN-GV 242
Query: 130 PLHAHVLKF-LEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXX 188
+H HVLK L+ D FV +L+N Y+K+GRL ++ +FDQ+ DL +WN+++
Sbjct: 243 LIHLHVLKHGLDS--DVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAY-- 298
Query: 189 XXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCY 248
E + AL F MQ+ RP+ +T+V+L S S L +
Sbjct: 299 ----------EQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGF 348
Query: 249 LLRNN-LKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
++R L + +G ALV+MY+K G +N A +FDQL +DT +N ++
Sbjct: 349 VIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLV 397
Score = 99.8 bits (247), Expect = 3e-21, Method: Composition-based stats.
Identities = 77/294 (26%), Positives = 140/294 (47%), Gaps = 36/294 (12%)
Query: 15 LLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY--------ALTIFSSI 66
L C ++N K++HA +L G S + +S+KL + Y + + F I
Sbjct: 28 LFNSCVNVNATKKLHALLLVFGK-------SQNIVLSTKLINLYVTHGDISLSRSTFDYI 80
Query: 67 PNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAH---KTLQPNSFTFPSLFKACCGSGH 123
+F +N++IS++ + H A + N++ + L+P+ +TFP + KAC
Sbjct: 81 HKKNIFSWNSIISAYVRFG-KYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS--- 136
Query: 124 WFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
G +H V K + D FV ASL++ Y++YG L V+ +F + D+ +WN ++
Sbjct: 137 -LVDGKKVHCCVFK-MGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMI 194
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
+ AL + M+ + + +T+ +++ C+ + GV
Sbjct: 195 SGFCQNGN------------AAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGV 242
Query: 244 WTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
H ++L++ L + FV AL++MYSK G L A +FDQ+ RD +N++I
Sbjct: 243 LIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIA 296
Score = 86.7 bits (213), Expect = 3e-17, Method: Composition-based stats.
Identities = 53/155 (34%), Positives = 83/155 (53%), Gaps = 13/155 (8%)
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
D + +L+N YAK G + + +FDQ+ D +WNTL+ L
Sbjct: 358 DVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYT------------QNGL 405
Query: 204 SLEALYLFCDMQMSRRR-PNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGT 262
+ EA+ + M+ R PN+ T V++I A S++GAL QG+ H L++N+L L+ FV T
Sbjct: 406 ASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVAT 465
Query: 263 ALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
L+D+Y KCG L A LF ++ + +NA+I
Sbjct: 466 CLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIA 500
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 21/187 (11%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A T+F +P +NTL++ +T + A YN + + PN T+ S+ A
Sbjct: 378 AHTVFDQLPRKDTISWNTLVTGYTQNGLASE-AIDAYNMMEECRDTIPNQGTWVSIIPAY 436
Query: 119 CGSGHWFQYGPPLHAHVLK---FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPD 175
G Q G +HA ++K +L D FV L++ Y K GRL + LF +I
Sbjct: 437 SHVGA-LQQGMKIHAKLIKNSLYL----DVFVATCLIDLYGKCGRLEDAMSLFYEIPRDT 491
Query: 176 LATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSN 235
WN ++ L EAL LF DM R + + +T V+L+SACS+
Sbjct: 492 SVPWNAIIAS------------LGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSH 539
Query: 236 LGALSQG 242
G + +G
Sbjct: 540 SGLVDEG 546
>Medtr4g108030.1 | PPR containing plant-like protein | HC |
chr4:44776233-44777913 | 20130731
Length = 544
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 155/354 (43%), Gaps = 75/354 (21%)
Query: 15 LLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISS-----KLASTYALTIFSSIPNP 69
LL K S++ LKQ+ A + +GL H + L+ S+ L+ Y+L SSI
Sbjct: 12 LLNKLSSMSELKQLQAIITKSGLHSHIPLTTKLIFFSALSPFGNLSHAYSLFQHSSILIH 71
Query: 70 TVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY-- 127
F+ NT+I +F SHS A +YN++L + + +S+T + KAC + Q
Sbjct: 72 NPFISNTMIRAF-SHSCFPLQALLIYNQMLINNVV-SDSYTCNFVLKACSRAYKLIQESG 129
Query: 128 ---------------GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQIS 172
G +H V+K + D VQ SLL FY++ G + V+R LFDQI
Sbjct: 130 SCDDDDDNLVVVYNKGTEIHCRVIK-IGFQNDPSVQNSLLYFYSQCGLVSVARYLFDQIK 188
Query: 173 EPDLAT-------------------------------WNTLLXXXXXXXXXXXXXXL--- 198
+ L + WNTL+ +
Sbjct: 189 DTSLVSWNIMISAYDRVDDYELADHLLELMPCKTVISWNTLIARYIRLGDVQAARRVFGC 248
Query: 199 --EDADLSLE--------------ALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG 242
E +S AL LF +MQ + +P EVTL++++ AC+ GAL G
Sbjct: 249 MPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEIG 308
Query: 243 VWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ L K+ ++G ALV+MY KCG L+LA ++F+ + + C+NAM+
Sbjct: 309 HKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAMV 362
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 99/227 (43%), Gaps = 20/227 (8%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F +P +N++I+ S A L++ + + ++P T S+ AC
Sbjct: 242 ARRVFGCMPERNAVSWNSMIAGCVSVRDYAG-ALELFSE-MQNAGVKPTEVTLISILGAC 299
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
+G + G ++ LK E + ++ +L+N Y K G L ++ +F+ + ++
Sbjct: 300 AETGA-LEIGHKIYES-LKVCEHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSC 357
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMS---RRRPNEVTLVALISACSN 235
WN ++ L E LF +M+ S RP+ VT + ++ ACS+
Sbjct: 358 WNAMV------------IGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSH 405
Query: 236 LGALSQGVWTHCYLL-RNNLKLNRFVGTALVDMYSKCGCLNLACQLF 281
G + + W +++ R + + +VD+ ++ G L A Q+
Sbjct: 406 KGLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLLTRRGLLEEAYQII 452
>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28566228-28568873 | 20130731
Length = 808
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 134/273 (49%), Gaps = 21/273 (7%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSH 84
+QVH ++ +G + Y S L+ + +K A + ++ + V +N+L+ F H
Sbjct: 256 EQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRH 315
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP-LHAHVLKFLEPPY 143
+ A L+ + + ++ + +TFPS+ CC G P +H ++K Y
Sbjct: 316 GLE-EEALRLFKNMHG-RNMKIDDYTFPSVLN-CCVVG---SINPKSVHGLIIKTGFENY 369
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
V +L++ YAK G + + +F+++ E D+ +W +L+
Sbjct: 370 -KLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHE---------- 418
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTA 263
E+L +FCDM+++ P++ + +++SAC+ L L G H +++ L+ ++ V +
Sbjct: 419 --ESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNS 476
Query: 264 LVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
LV MY+KCGCL+ A +F + +D + A+I
Sbjct: 477 LVAMYAKCGCLDDADAIFVSMQVKDVITWTAII 509
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 20/157 (12%)
Query: 151 LLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDA--------- 201
LLN +K G++ +R LFD++ + D +WNT++ L D
Sbjct: 42 LLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITW 101
Query: 202 ----------DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLR 251
+EA LF M++ + ++ TL +++ CS+LG + G H ++++
Sbjct: 102 SSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVK 161
Query: 252 NNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLT-DR 287
N + N FV T LVDMY+KC C++ A LF L DR
Sbjct: 162 NGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDR 198
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 128/315 (40%), Gaps = 55/315 (17%)
Query: 19 CHSLNTLKQVHAQMLTTGLALHT-YCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNT 76
C + L+ +H TT + + Y + LL SK A +F +P + +NT
Sbjct: 16 CKFMAFLRSIHT---TTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNT 72
Query: 77 LISSFTSHSSQIHL------------------------------AFSLYNRILAHKTLQP 106
+ISS+ + + AF L+ R + + +
Sbjct: 73 MISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLF-RSMRLEGWKA 131
Query: 107 NSFTFPSLFKACCGSGHWFQYGPPLHAHVLK-FLEPPYDHFVQASLLNFYAKYGRLCVSR 165
+ FT S+ + C G Q G +H V+K E + FV L++ YAK + +
Sbjct: 132 SQFTLGSVLRVCSSLG-LIQTGEMIHGFVVKNGFEG--NVFVVTGLVDMYAKCKCVSEAE 188
Query: 166 CLFD--QISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNE 223
LF + + W ++ ++ D +A+ F M N+
Sbjct: 189 FLFKGLEFDRKNHVLWTAMVTGYA-----------QNGD-GYKAVEFFRYMHAQGVECNQ 236
Query: 224 VTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQ 283
T +++ACS++ A G H +++++ N +V +ALVDMY+KCG L A + +
Sbjct: 237 YTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLET 296
Query: 284 LTDRDTFCYNA-MIG 297
+ D D +N+ M+G
Sbjct: 297 MEDDDVVSWNSLMVG 311
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 111/271 (40%), Gaps = 38/271 (14%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSH 84
K VH ++ TG + + L+ + +K A T+F + V + +L++ + +
Sbjct: 355 KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQN 414
Query: 85 SS-QIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPP- 142
+S + L R+ + P+ F S+ AC ++G +H L F++
Sbjct: 415 NSHEESLKIFCDMRVTG---VNPDQFIVASILSAC-AELTLLEFGKQVH---LDFIKSGL 467
Query: 143 -YDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDA 201
+ V SL+ YAK G L + +F + D+ TW ++ DA
Sbjct: 468 RWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDA 527
Query: 202 DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG 261
M S RP+ +T + L+ ACS+ G + +G + ++N+ G
Sbjct: 528 ------------MVSSGTRPDFITFIGLLFACSHAGLVDEG-------RKYFQQMNKVYG 568
Query: 262 TA--------LVDMYSKCGCLNLACQLFDQL 284
++D++ + G L+ A QL DQ+
Sbjct: 569 IKPGPEHYACMIDLFGRSGKLDEAKQLLDQM 599
>Medtr4g015760.4 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 703
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 143/292 (48%), Gaps = 21/292 (7%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
++KLL+ C S ++ Q+H+Q L GL ++ ++ L + ++ AS + A +F P+ T
Sbjct: 7 LVKLLETCCSKLSISQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRT 66
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTL----QPNSFTFPSLFKACCGSGHWFQ 126
V+L+N L+ S+ + SL+ ++ ++ +P++++ K+C G
Sbjct: 67 VYLWNALLRSYCFEGEWVE-TLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLL- 124
Query: 127 YGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXX 186
G +H LK + D FV ++L++ Y K G++ + +F + +PD+ W +++
Sbjct: 125 LGKVIHG-FLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGY 183
Query: 187 XXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR-RPNEVTLVALISACSNLGALSQGVWT 245
E + AL F M +S + P+ VTLV++ SAC+ L G
Sbjct: 184 ------------EQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSV 231
Query: 246 HCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
H ++ R L + +L+ +Y K G + A LF +++D+D ++ M+
Sbjct: 232 HGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVA 283
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 137/275 (49%), Gaps = 21/275 (7%)
Query: 26 KQVHAQMLTTGLALHTYCLSH-LLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTS 83
+ VH + GL + CL++ LL + K S A +F + + + ++T+++ +
Sbjct: 229 RSVHGFVKRKGLD-NKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYAD 287
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC-CGSGHWFQYGPPLHAHVLKFLEPP 142
+ ++ + L+N +L K ++PN T S+ +AC C S + G +H + +
Sbjct: 288 NGAETDV-LDLFNEML-DKRIKPNWVTVVSVLRACACISN--LEEGMKIHELAVNY-GFE 342
Query: 143 YDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDAD 202
+ V +L++ Y K + LF+++ + D+ W L D
Sbjct: 343 METTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYA------------DNG 390
Query: 203 LSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGT 262
+ E++++F +M S RP+ + LV +++ S LG L Q V H ++++N + N+F+G
Sbjct: 391 MVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGA 450
Query: 263 ALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+L+++Y+KC + A ++F +T +D ++++I
Sbjct: 451 SLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIA 485
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 127/279 (45%), Gaps = 22/279 (7%)
Query: 12 ILKLLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSK-LASTYALTIFSSIP 67
++ +L+ C ++ L++ +H + G + T + L+ + K + A+ +F+ +P
Sbjct: 313 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 372
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
V + L S + + +H + ++ +L+ T +P++ + G Q
Sbjct: 373 KKDVIAWAVLFSGYADNG-MVHESMWVFRNMLSSGT-RPDAIALVKILTTISELG-ILQQ 429
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
LHA V+K + F+ ASL+ YAK + + +F ++ D+ TW++++
Sbjct: 430 AVCLHAFVIKN-GFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYG 488
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACSNLGALSQGVWTH 246
EAL LF M S +PN VT ++++SACS+ G + +G+
Sbjct: 489 FHGQGE------------EALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMF 536
Query: 247 CYLL-RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
++ + LK N +VD+ + G L++A + + +
Sbjct: 537 DIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNM 575
>Medtr4g015760.1 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 703
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 143/292 (48%), Gaps = 21/292 (7%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
++KLL+ C S ++ Q+H+Q L GL ++ ++ L + ++ AS + A +F P+ T
Sbjct: 7 LVKLLETCCSKLSISQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRT 66
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTL----QPNSFTFPSLFKACCGSGHWFQ 126
V+L+N L+ S+ + SL+ ++ ++ +P++++ K+C G
Sbjct: 67 VYLWNALLRSYCFEGEWVE-TLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLL- 124
Query: 127 YGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXX 186
G +H LK + D FV ++L++ Y K G++ + +F + +PD+ W +++
Sbjct: 125 LGKVIHG-FLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGY 183
Query: 187 XXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR-RPNEVTLVALISACSNLGALSQGVWT 245
E + AL F M +S + P+ VTLV++ SAC+ L G
Sbjct: 184 ------------EQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSV 231
Query: 246 HCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
H ++ R L + +L+ +Y K G + A LF +++D+D ++ M+
Sbjct: 232 HGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVA 283
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 137/275 (49%), Gaps = 21/275 (7%)
Query: 26 KQVHAQMLTTGLALHTYCLSH-LLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTS 83
+ VH + GL + CL++ LL + K S A +F + + + ++T+++ +
Sbjct: 229 RSVHGFVKRKGLD-NKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYAD 287
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC-CGSGHWFQYGPPLHAHVLKFLEPP 142
+ ++ + L+N +L K ++PN T S+ +AC C S + G +H + +
Sbjct: 288 NGAETDV-LDLFNEML-DKRIKPNWVTVVSVLRACACISN--LEEGMKIHELAVNY-GFE 342
Query: 143 YDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDAD 202
+ V +L++ Y K + LF+++ + D+ W L D
Sbjct: 343 METTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYA------------DNG 390
Query: 203 LSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGT 262
+ E++++F +M S RP+ + LV +++ S LG L Q V H ++++N + N+F+G
Sbjct: 391 MVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGA 450
Query: 263 ALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+L+++Y+KC + A ++F +T +D ++++I
Sbjct: 451 SLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIA 485
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 127/279 (45%), Gaps = 22/279 (7%)
Query: 12 ILKLLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSK-LASTYALTIFSSIP 67
++ +L+ C ++ L++ +H + G + T + L+ + K + A+ +F+ +P
Sbjct: 313 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 372
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
V + L S + + +H + ++ +L+ T +P++ + G Q
Sbjct: 373 KKDVIAWAVLFSGYADNG-MVHESMWVFRNMLSSGT-RPDAIALVKILTTISELG-ILQQ 429
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
LHA V+K + F+ ASL+ YAK + + +F ++ D+ TW++++
Sbjct: 430 AVCLHAFVIKN-GFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYG 488
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACSNLGALSQGVWTH 246
EAL LF M S +PN VT ++++SACS+ G + +G+
Sbjct: 489 FHGQGE------------EALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMF 536
Query: 247 CYLL-RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
++ + LK N +VD+ + G L++A + + +
Sbjct: 537 DIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNM 575
>Medtr3g037470.1 | TPR superfamily protein | HC |
chr3:13772234-13768538 | 20130731
Length = 424
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 18/193 (9%)
Query: 107 NSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQ--ASLLNFYAKYGRLCVS 164
+SF+F KAC H + G LH+ ++KF Y+ +Q SLL YA G L +
Sbjct: 74 DSFSFLYTLKACINKNHSYVLGKQLHSLIIKF---GYESIIQLQTSLLKVYAGGGNLFDA 130
Query: 165 RCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEV 224
+FD+I E ++ W +L+ + S + L LF M M+ P+++
Sbjct: 131 HQVFDEIPEKNIICWTSLISAYV------------ENHKSNKGLELFRLMLMNNVEPDQI 178
Query: 225 TLVALISACSNLGALSQGVWTHCYLLRN-NLKLNRFVGTALVDMYSKCGCLNLACQLFDQ 283
L +SAC++ G L G W H ++ R +K++ + AL++MY+KCG + A +LFD
Sbjct: 179 VLTTALSACADAGGLEMGEWIHDFVRRKQGMKIDLHLNNALINMYAKCGDIGNARKLFDN 238
Query: 284 LTDRDTFCYNAMI 296
++D + +MI
Sbjct: 239 TRNKDVTTWTSMI 251
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 115/272 (42%), Gaps = 34/272 (12%)
Query: 16 LQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLY 74
+ K HS KQ+H+ ++ G + LL + + + + A +F IP + +
Sbjct: 86 INKNHSYVLGKQLHSLIIKFGYESIIQLQTSLLKVYAGGGNLFDAHQVFDEIPEKNIICW 145
Query: 75 NTLISSFT-SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHA 133
+LIS++ +H S L R++ ++P+ + AC +G + G +H
Sbjct: 146 TSLISAYVENHKSNKGLELF---RLMLMNNVEPDQIVLTTALSACADAG-GLEMGEWIHD 201
Query: 134 HVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXX 193
V + D + +L+N YAK G + +R LFD D+ TW +++
Sbjct: 202 FVRRKQGMKIDLHLNNALINMYAKCGDIGNARKLFDNTRNKDVTTWTSMIVGHAVHGE-- 259
Query: 194 XXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNN 253
+ EAL LF +M PN+VT + ++ ACS+ G + +G RN
Sbjct: 260 ----------AREALQLFSEMNFIVS-PNDVTFIGVLMACSHAGLVEEGK-------RNF 301
Query: 254 LKLNRFVGTA--------LVDMYSKCGCLNLA 277
+N G +VD++ + G L A
Sbjct: 302 RSMNEDYGIEPREPHFGCMVDLFCRSGHLREA 333
>Medtr8g069550.1 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 157/341 (46%), Gaps = 55/341 (16%)
Query: 9 NH--PILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSS 65
NH +LKL + + K +H+ ++ T T+ L++L++ +KL S YA +F
Sbjct: 19 NHYCALLKLCCETRNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQ 78
Query: 66 IPNPTVFLYNTLISSFT--SHSSQIHLAFS----------------------LYNRILAH 101
+P+P ++ +NT++S+++ S++ F +Y + A+
Sbjct: 79 MPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAY 138
Query: 102 K-------TLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNF 154
+ N TF +L G + G +H HV+KF Y FV + L++
Sbjct: 139 NLMLKNDGSFNLNRITFSTLLILASKRG-CVKLGRQIHGHVVKFGFMSY-VFVGSPLVDM 196
Query: 155 YAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXL----EDAD-------- 202
Y+K G + +R +FD++ E ++ +NTL+ L + D
Sbjct: 197 YSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 256
Query: 203 -------LSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLK 255
L +A+ +F +M++ + ++ T ++++AC + AL +G H Y++R + K
Sbjct: 257 TGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTDYK 316
Query: 256 LNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
N FV +ALV MY KC + A +F ++T ++ + AM+
Sbjct: 317 DNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAML 357
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 145/323 (44%), Gaps = 46/323 (14%)
Query: 5 NPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIF 63
N I +L L K + +Q+H ++ G + + S L+ + SK+ + A +F
Sbjct: 151 NRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVF 210
Query: 64 SSIPNPTVFLYNTLI---------------------------SSFTSHSSQIHL---AFS 93
+P V +YNTLI +S + +Q L A
Sbjct: 211 DELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAID 270
Query: 94 LYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLN 153
++ R + + LQ + +TF S+ AC G Q G +HA++++ + + FV ++L+
Sbjct: 271 IF-REMKLENLQMDQYTFGSVLTAC-GCVMALQEGKQVHAYIIR-TDYKDNIFVASALVV 327
Query: 154 FYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCD 213
Y K + + +F +++ ++ +W +L S EA+ F D
Sbjct: 328 MYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQN------------GYSEEAVKTFSD 375
Query: 214 MQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGC 273
MQ P++ TL ++IS+C+NL +L +G H L + L V ALV +Y KCG
Sbjct: 376 MQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGS 435
Query: 274 LNLACQLFDQLTDRDTFCYNAMI 296
+ + +LF++++ +D + A++
Sbjct: 436 IEDSHRLFNEISFKDEVTWTALV 458
>Medtr8g069550.2 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 157/341 (46%), Gaps = 55/341 (16%)
Query: 9 NH--PILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSS 65
NH +LKL + + K +H+ ++ T T+ L++L++ +KL S YA +F
Sbjct: 19 NHYCALLKLCCETRNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQ 78
Query: 66 IPNPTVFLYNTLISSFT--SHSSQIHLAFS----------------------LYNRILAH 101
+P+P ++ +NT++S+++ S++ F +Y + A+
Sbjct: 79 MPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAY 138
Query: 102 K-------TLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNF 154
+ N TF +L G + G +H HV+KF Y FV + L++
Sbjct: 139 NLMLKNDGSFNLNRITFSTLLILASKRG-CVKLGRQIHGHVVKFGFMSY-VFVGSPLVDM 196
Query: 155 YAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXL----EDAD-------- 202
Y+K G + +R +FD++ E ++ +NTL+ L + D
Sbjct: 197 YSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 256
Query: 203 -------LSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLK 255
L +A+ +F +M++ + ++ T ++++AC + AL +G H Y++R + K
Sbjct: 257 TGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTDYK 316
Query: 256 LNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
N FV +ALV MY KC + A +F ++T ++ + AM+
Sbjct: 317 DNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAML 357
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 145/323 (44%), Gaps = 46/323 (14%)
Query: 5 NPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIF 63
N I +L L K + +Q+H ++ G + + S L+ + SK+ + A +F
Sbjct: 151 NRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVF 210
Query: 64 SSIPNPTVFLYNTLI---------------------------SSFTSHSSQIHL---AFS 93
+P V +YNTLI +S + +Q L A
Sbjct: 211 DELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAID 270
Query: 94 LYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLN 153
++ R + + LQ + +TF S+ AC G Q G +HA++++ + + FV ++L+
Sbjct: 271 IF-REMKLENLQMDQYTFGSVLTAC-GCVMALQEGKQVHAYIIR-TDYKDNIFVASALVV 327
Query: 154 FYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCD 213
Y K + + +F +++ ++ +W +L S EA+ F D
Sbjct: 328 MYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQN------------GYSEEAVKTFSD 375
Query: 214 MQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGC 273
MQ P++ TL ++IS+C+NL +L +G H L + L V ALV +Y KCG
Sbjct: 376 MQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGS 435
Query: 274 LNLACQLFDQLTDRDTFCYNAMI 296
+ + +LF++++ +D + A++
Sbjct: 436 IEDSHRLFNEISFKDEVTWTALV 458
>Medtr7g417770.1 | PPR containing plant-like protein | HC |
chr7:5697167-5694522 | 20130731
Length = 881
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 17/271 (6%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSHS 85
Q+HA L T + L + +K A +F++ PNPT +N LI + +
Sbjct: 292 QLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGY-ARQ 350
Query: 86 SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDH 145
Q+ A ++ R L L + + AC + + G LH +K ++
Sbjct: 351 DQVLEALEIF-RSLQKSYLDFDEISLSGALTACSAIKGYLE-GIQLHGLAVK-CGLDFNI 407
Query: 146 FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSL 205
V ++L+ YAK G L + +FD + D +WN ++ E +
Sbjct: 408 CVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAH------------EQNEHVE 455
Query: 206 EALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALV 265
E L LF M S P++ T +++ AC+ AL+ G+ H ++++ + L+ FVG+A++
Sbjct: 456 ETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAII 515
Query: 266 DMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
DMY KCG L A ++ ++L +R T +N++I
Sbjct: 516 DMYCKCGMLVEAEKIHERLEERTTVSWNSII 546
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 122/271 (45%), Gaps = 17/271 (6%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSHS 85
Q+H + GL + + +L + +K + A IF + +N +I++ +
Sbjct: 393 QLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAH-EQN 451
Query: 86 SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDH 145
+ +L+ +L T++P+ +TF S+ KAC G YG +H V+K D
Sbjct: 452 EHVEETLALFVSML-RSTMEPDDYTFGSVVKACAGK-KALNYGMEVHGRVIKS-GMGLDW 508
Query: 146 FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSL 205
FV +++++ Y K G L + + +++ E +WN+++
Sbjct: 509 FVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISG------------FSSEKQGE 556
Query: 206 EALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALV 265
AL F M P+ T ++ C+NL + G H +L+ L + ++ + +V
Sbjct: 557 NALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIV 616
Query: 266 DMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
DMYSKCG + + +F++ RD ++AMI
Sbjct: 617 DMYSKCGNMQDSRIMFEKAPKRDYVTWSAMI 647
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 143/290 (49%), Gaps = 21/290 (7%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
++K +LN +VH +++ +G+ L + S ++ + K A I + T
Sbjct: 479 VVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERT 538
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+N++IS F+S Q A S ++R+L + P++FT+ ++ C + G
Sbjct: 539 TVSWNSIISGFSSEK-QGENALSYFSRMLQVGVI-PDNFTYATVLDICANLAT-VELGKQ 595
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+H +LK L+ D ++ +++++ Y+K G + SR +F++ + D TW+ ++
Sbjct: 596 IHGQILK-LQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYH- 653
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
L +A+ LF +MQ+ +PN ++++ AC+++G + +G+ + +
Sbjct: 654 -----------GLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGL-HYFREM 701
Query: 251 RNNLKLNRFVG--TALVDMYSKCGCLNLACQLFDQLT-DRDTFCYNAMIG 297
R++ L+ + + +VD+ + G +N A +L + + + D + ++G
Sbjct: 702 RSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLG 751
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 123/327 (37%), Gaps = 51/327 (15%)
Query: 5 NPIFNHPILKLLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSK-LASTYAL 60
NP + QKC +L + KQ HAQ+ TG + + LL K L YA
Sbjct: 34 NPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAF 93
Query: 61 TIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSF----------- 109
+F +P V +NT+I + + A L++ + + NS
Sbjct: 94 NVFDKMPQRDVISWNTMIFGYAG-VGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHR 152
Query: 110 -------------------TFPSLFKACCGSGHWFQYGPPLHAHVLKF-LEPPYDHFVQA 149
TF + KAC G YG L H L + D
Sbjct: 153 KSIEIFTKMRLLEIQHDYATFAVVLKACTGIE---DYGLGLQVHCLAIQMGFDSDVVTGT 209
Query: 150 SLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALY 209
+L++ Y+ +L + +F ++ E + W+ ++ D E L
Sbjct: 210 ALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRN------------DRFTEGLK 257
Query: 210 LFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYS 269
L+ M ++ T + +C+ L A G H Y L+ N + VGTA +DMY+
Sbjct: 258 LYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYA 317
Query: 270 KCGCLNLACQLFDQLTDRDTFCYNAMI 296
KC + A ++F+ + +NA+I
Sbjct: 318 KCDRMVDARKVFNTFPNPTRQSHNALI 344
>Medtr7g017700.1 | PPR containing plant-like protein | HC |
chr7:5672185-5669078 | 20130731
Length = 881
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 17/271 (6%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSHS 85
Q+HA L T + L + +K A +F++ PNPT +N LI + +
Sbjct: 292 QLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGY-ARQ 350
Query: 86 SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDH 145
Q+ A ++ R L L + + AC + + G LH +K ++
Sbjct: 351 DQVLEALEIF-RSLQKSYLDFDEISLSGALTACSAIKGYLE-GIQLHGLAVK-CGLDFNI 407
Query: 146 FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSL 205
V ++L+ YAK G L + +FD + D +WN ++ E +
Sbjct: 408 CVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAH------------EQNEHVE 455
Query: 206 EALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALV 265
E L LF M S P++ T +++ AC+ AL+ G+ H ++++ + L+ FVG+A++
Sbjct: 456 ETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAII 515
Query: 266 DMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
DMY KCG L A ++ ++L +R T +N++I
Sbjct: 516 DMYCKCGMLVEAEKIHERLEERTTVSWNSII 546
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 122/271 (45%), Gaps = 17/271 (6%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSHS 85
Q+H + GL + + +L + +K + A IF + +N +I++ +
Sbjct: 393 QLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAH-EQN 451
Query: 86 SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDH 145
+ +L+ +L T++P+ +TF S+ KAC G YG +H V+K D
Sbjct: 452 EHVEETLALFVSML-RSTMEPDDYTFGSVVKACAGK-KALNYGMEVHGRVIKS-GMGLDW 508
Query: 146 FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSL 205
FV +++++ Y K G L + + +++ E +WN+++
Sbjct: 509 FVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISG------------FSSEKQGE 556
Query: 206 EALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALV 265
AL F M P+ T ++ C+NL + G H +L+ L + ++ + +V
Sbjct: 557 NALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIV 616
Query: 266 DMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
DMYSKCG + + +F++ RD ++AMI
Sbjct: 617 DMYSKCGNMQDSRIMFEKAPKRDYVTWSAMI 647
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 143/290 (49%), Gaps = 21/290 (7%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
++K +LN +VH +++ +G+ L + S ++ + K A I + T
Sbjct: 479 VVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERT 538
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+N++IS F+S Q A S ++R+L + P++FT+ ++ C + G
Sbjct: 539 TVSWNSIISGFSSEK-QGENALSYFSRMLQVGVI-PDNFTYATVLDICANLAT-VELGKQ 595
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+H +LK L+ D ++ +++++ Y+K G + SR +F++ + D TW+ ++
Sbjct: 596 IHGQILK-LQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYH- 653
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
L +A+ LF +MQ+ +PN ++++ AC+++G + +G+ + +
Sbjct: 654 -----------GLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGL-HYFREM 701
Query: 251 RNNLKLNRFVG--TALVDMYSKCGCLNLACQLFDQLT-DRDTFCYNAMIG 297
R++ L+ + + +VD+ + G +N A +L + + + D + ++G
Sbjct: 702 RSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLG 751
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 123/327 (37%), Gaps = 51/327 (15%)
Query: 5 NPIFNHPILKLLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSK-LASTYAL 60
NP + QKC +L + KQ HAQ+ TG + + LL K L YA
Sbjct: 34 NPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAF 93
Query: 61 TIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSF----------- 109
+F +P V +NT+I + + A L++ + + NS
Sbjct: 94 NVFDKMPQRDVISWNTMIFGYAG-VGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHR 152
Query: 110 -------------------TFPSLFKACCGSGHWFQYGPPLHAHVLKF-LEPPYDHFVQA 149
TF + KAC G YG L H L + D
Sbjct: 153 KSIEIFTKMRLLEIQHDYATFAVVLKACTGIE---DYGLGLQVHCLAIQMGFDSDVVTGT 209
Query: 150 SLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALY 209
+L++ Y+ +L + +F ++ E + W+ ++ D E L
Sbjct: 210 ALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRN------------DRFTEGLK 257
Query: 210 LFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYS 269
L+ M ++ T + +C+ L A G H Y L+ N + VGTA +DMY+
Sbjct: 258 LYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYA 317
Query: 270 KCGCLNLACQLFDQLTDRDTFCYNAMI 296
KC + A ++F+ + +NA+I
Sbjct: 318 KCDRMVDARKVFNTFPNPTRQSHNALI 344
>Medtr4g082470.1 | PPR containing plant-like protein | HC |
chr4:32162319-32165367 | 20130731
Length = 700
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 29/285 (10%)
Query: 6 PIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS----TYALT 61
P+ P + L + C T+K +HA ++ +G T T+ S AS +A T
Sbjct: 37 PVPLPPTIHLSRICKHPTTVKTLHASLIISGHPPDT-------TLISLYASFGFLRHART 89
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQP-NSFTFPSLFKACCG 120
+F +P+PT + +I + H+ S YN LA TL N S+
Sbjct: 90 LFHRLPSPTHHSFKLIIRWHFLNDVHSHVV-SFYN--LARTTLGSFNDLVVFSILLKTAS 146
Query: 121 SGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWN 180
LH ++LK D FV SL++ Y+K G+L +R +FD+I + + +W
Sbjct: 147 QLRDIVLTTKLHCNILK--SNAADSFVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWT 204
Query: 181 TLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALS 240
+++ + + E L LF M+ N T+ +L++AC+ LG L
Sbjct: 205 SMIVAYVQN------------ECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLH 252
Query: 241 QGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLT 285
QG W H Y+++N +++N ++ T+L++MY KCG + A +FD+ +
Sbjct: 253 QGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFS 297
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 138/294 (46%), Gaps = 28/294 (9%)
Query: 15 LLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
L+ C L L Q VH ++ G+ +++Y + LL + K A ++F T
Sbjct: 241 LVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVST 300
Query: 71 ------VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHW 124
+ + +I +T A L+ ++ L PNS T SL AC +
Sbjct: 301 CGGGDDLVFWTAMIVGYTQRGYP-QAALELFTDKKWYRIL-PNSVTLASLLSACAQLEN- 357
Query: 125 FQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLX 184
G LH V+K+ D ++ SL++ YAK G + + +F + D+ +WN+++
Sbjct: 358 IVMGKLLHVLVVKY--GLDDTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVIS 415
Query: 185 XXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVW 244
+ + EAL LF M+M P+ VT+V ++SAC+++GA G+
Sbjct: 416 GYA------------QSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLS 463
Query: 245 THCYLLRNNLKLNR-FVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
H + L+ L + +VGTAL++ Y+KCG A +FD + +++ + AMIG
Sbjct: 464 LHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIG 517
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 24/228 (10%)
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS 121
+F++ + V +N++IS + + S + A L+NR + ++ P++ T + AC
Sbjct: 398 VFATTVDKDVVSWNSVISGY-AQSGSAYEALDLFNR-MRMESFLPDAVTVVGVLSACASV 455
Query: 122 GHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
G Q G LH LK+ +V +LLNFYAK G +R +FD + E + TW
Sbjct: 456 GA-HQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAA 514
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
++ + +L LF DM PNEV L++ACS+ G + +
Sbjct: 515 MIGGCGMQGD------------GVGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEE 562
Query: 242 GVWTHCYLLRNNLKLNRFVGTA-----LVDMYSKCGCLNLACQLFDQL 284
G+ ++ + +LN FV + +VD+ ++ G L A D++
Sbjct: 563 GLMIFDFMCK---ELN-FVPSMKHYACMVDLLARAGNLQEALDFIDKM 606
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 17/166 (10%)
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
LHA ++ PP +L++ YA +G L +R LF ++ P ++ ++
Sbjct: 59 LHASLIISGHPP-----DTTLISLYASFGFLRHARTLFHRLPSPTHHSFKLIIRWHFLND 113
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
+ L+ L F D+ V L+ S L + HC +L
Sbjct: 114 VHSHVVSFYN--LARTTLGSFNDL---------VVFSILLKTASQLRDIVLTTKLHCNIL 162
Query: 251 RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
++N + FV T+LVD YSKCG L A ++FD++ DR + +MI
Sbjct: 163 KSNAA-DSFVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMI 207
>Medtr4g014050.1 | PPR containing plant-like protein | HC |
chr4:3891221-3897546 | 20130731
Length = 935
Score = 99.4 bits (246), Expect = 4e-21, Method: Composition-based stats.
Identities = 71/273 (26%), Positives = 119/273 (43%), Gaps = 19/273 (6%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKL-ASTYALTIFSSIPNPTVFLYNTLISSFTSH 84
K +HAQ + G Y ++ L T+ SK Y + +F + P V + LI ++
Sbjct: 272 KAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQM 331
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
+ A + R + + PN +TF S+ AC ++G +H H L+ D
Sbjct: 332 GDE-ERALDAFKR-MRKSDVSPNEYTFASVISACANLA-ITKWGEQIHGHALRL--GLVD 386
Query: 145 HF-VQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
V S++ Y+K G L + +FD ++ D+ +W+T++
Sbjct: 387 ALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYC------------QGSH 434
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTA 263
+ EA M +PNE L +++S C ++ L G H Y L L V +A
Sbjct: 435 AKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSA 494
Query: 264 LVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L+ MYS+ G L A ++FD + + D + AMI
Sbjct: 495 LISMYSRSGNLQEASKIFDSIKNNDIVSWTAMI 527
Score = 80.5 bits (197), Expect = 2e-15, Method: Composition-based stats.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 21/272 (7%)
Query: 28 VHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPTVFLYNTLISSFTSHSS 86
+H + +GL + S L+ + K+ T ++F ++ V + +I H+
Sbjct: 173 LHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLV-HAG 231
Query: 87 QIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLK--FLEPPYD 144
S ++ + K + +S TF KA SG YG +HA +K F E Y
Sbjct: 232 CSLDGLSYFSEMWRSK-VGYDSHTFAVALKASAESG-LLHYGKAIHAQTIKQGFNETAY- 288
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
V +L Y+K + LF ++S PD+ +W L+ + D + +
Sbjct: 289 --VVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQ---------MGDEERA 337
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTAL 264
L+A F M+ S PNE T ++ISAC+NL G H + LR L V ++
Sbjct: 338 LDA---FKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSI 394
Query: 265 VDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ +YSKCG L A +FD +T +D ++ +I
Sbjct: 395 ITLYSKCGLLQEASLVFDGMTRKDIISWSTII 426
Score = 62.8 bits (151), Expect = 4e-10, Method: Composition-based stats.
Identities = 54/238 (22%), Positives = 110/238 (46%), Gaps = 24/238 (10%)
Query: 15 LLQKCHSLNTLK---QVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
++ C +L K Q+H L GL + ++T+ SK A +F +
Sbjct: 359 VISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKD 418
Query: 71 VFLYNTLISSFT--SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYG 128
+ ++T+IS + SH+ + AF+ Y ++ + +PN F S+ + CGS + G
Sbjct: 419 IISWSTIISVYCQGSHAKE---AFN-YLSWMSREGPKPNEFALASVL-SVCGSMALLEPG 473
Query: 129 PPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXX 188
+HA+ L + ++ V ++L++ Y++ G L + +FD I D+ +W ++
Sbjct: 474 KQVHAYAL-CIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYA- 531
Query: 189 XXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTH 246
+ S EA+ LF ++ P+ VT + +++AC++ G + G + +
Sbjct: 532 -----------EHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYY 578
Score = 57.8 bits (138), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 13/148 (8%)
Query: 150 SLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALY 209
S L K G++C +R +F+++S D +W L+ +A S EAL
Sbjct: 89 SQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYV------------NAANSNEALI 136
Query: 210 LFCDMQM-SRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMY 268
LF +M + S + ++ + + AC+ + G H + +++ L + FV +ALVDMY
Sbjct: 137 LFSNMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMY 196
Query: 269 SKCGCLNLACQLFDQLTDRDTFCYNAMI 296
K G C +F+ +T R+ + A+I
Sbjct: 197 MKVGKTEQGCSVFENMTTRNVVSWTAVI 224
>Medtr1g073160.1 | PPR containing plant-like protein | HC |
chr1:32444344-32441927 | 20130731
Length = 627
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 146/309 (47%), Gaps = 44/309 (14%)
Query: 15 LLQKCHSLNTLKQVHAQM--LTTGLALHTYCLS----HLLTISSKLASTY--------AL 60
LL ++L T+ +V ++ L G +H L + + + + S Y A+
Sbjct: 122 LLPDDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAM 181
Query: 61 TIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYN------RILAHKTLQPNSFTFPSL 114
+F +P V +N +IS + +L +SLY R + + ++FT SL
Sbjct: 182 KVFDEMPQRNVGSFNVIISGCAALG---NLDYSLYADLWNFFRRMQCQGYNADAFTVASL 238
Query: 115 FKACCGSGHWFQYGPPLHAHVLK---FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQI 171
CC S F +G LH +++K L+ D + +SL++ Y++ +L +SR +FDQ+
Sbjct: 239 LPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQM 298
Query: 172 SEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR-RPNEVTLVALI 230
++ W ++ AL LF +MQ R RPN V+LV+++
Sbjct: 299 KSRNIYVWTAMINGYVQNGAPEG------------ALILFREMQRKDRIRPNRVSLVSVL 346
Query: 231 SACSNLGALSQGVWTHCYLLRNNLKLNRFVG--TALVDMYSKCGCLNLACQLFDQLT-DR 287
AC L L G H + ++ ++ N ++ AL+DMY+KCG L+ A ++FD + +
Sbjct: 347 PACGLLVGLMGGKQVHAFSIK--MEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSK 404
Query: 288 DTFCYNAMI 296
D ++++I
Sbjct: 405 DAITWSSII 413
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 142/305 (46%), Gaps = 39/305 (12%)
Query: 10 HPILKLLQ---KCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYAL------ 60
H +L LLQ HSL +Q H+Q+LT C S ++++L S YA
Sbjct: 27 HNLLHLLQLSIDLHSLKLTQQCHSQILTN-------CFSQNAFLTTRLISAYATFGDSIM 79
Query: 61 --TIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
+F S+ V+L+N+LI+ + + Q A L+ ++ + L P+ +T ++ K
Sbjct: 80 SKLVFDSVHTKNVYLWNSLINGYVKN-HQFDNAIVLFRQM--GRCLLPDDYTLATISKV- 135
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
G G +H L+ + D V S+++ Y + + +FD++ + ++ +
Sbjct: 136 SGEIQDLVLGKLIHGKSLR-IGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGS 194
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEA--LYLFCDMQMSRRRPNEVTLVALISA-CSN 235
+N ++ L + D SL A F MQ + T+ +L+ C +
Sbjct: 195 FNVII---------SGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDS 245
Query: 236 LGALSQGVWTHCYLLRNNLKL----NRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFC 291
G G HCYL++N L L + +G++L+DMYS+ L L+ ++FDQ+ R+ +
Sbjct: 246 DGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYV 305
Query: 292 YNAMI 296
+ AMI
Sbjct: 306 WTAMI 310
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 113/269 (42%), Gaps = 28/269 (10%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALT--------IFSSIPNPTVFLYNTL 77
+++H ++ GL L H+ S L Y+ + +F + + ++++ +
Sbjct: 253 RELHCYLVKNGLDLKMCSDVHM---GSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAM 309
Query: 78 ISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLK 137
I+ + + + A L+ + ++PN + S+ AC G G +HA +K
Sbjct: 310 INGYVQNGAP-EGALILFREMQRKDRIRPNRVSLVSVLPAC-GLLVGLMGGKQVHAFSIK 367
Query: 138 FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQIS-EPDLATWNTLLXXXXXXXXXXXXX 196
Y A L++ YAK G L +R +FD S D TW++++
Sbjct: 368 MEFNDYISLRNA-LIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQ--- 423
Query: 197 XLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRN-NLK 255
EAL + +M +P+ +T+V ++SAC G + +G+ + L +K
Sbjct: 424 ---------EALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIYNSLTTEYEMK 474
Query: 256 LNRFVGTALVDMYSKCGCLNLACQLFDQL 284
+ + +VD+ + G L+ A ++
Sbjct: 475 PSVEICGCVVDLLGRSGQLDQALDFIREM 503
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 145/350 (41%), Gaps = 79/350 (22%)
Query: 16 LQKC---HSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY--------ALTIFS 64
LQKC +L KQ+HA +LTTG +++L++SSKL Y A +F
Sbjct: 21 LQKCLKSKALKPGKQIHAMLLTTGTN------TNILSLSSKLVGMYSSCTDLKSATLLFH 74
Query: 65 SIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHW 124
+I P VF +N +I + + F Y R++ L N FTF + K C G
Sbjct: 75 NIHKPNVFAFNWMILGMVYNGYFDNALF--YFRLMRDIGLIGNKFTFGIVIKTCVGLMD- 131
Query: 125 FQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAK--------------------------- 157
+ G +H + + + D + L++ Y K
Sbjct: 132 MKKGKQVHGMICE-MGLMNDVLIGNGLIDMYGKCGSVDYACRVFDGMSERDVASWTSMIC 190
Query: 158 ----YGRLCVSRCLFDQIS----EPDLATWNTLLXXXXXXXXXXXXXXLEDA-------- 201
GR+ + LF+++ EP+ TWN ++ +
Sbjct: 191 GFCNTGRIEEALVLFERMKMEGYEPNDFTWNAIIATYARLGDSKKAFGFMERMQKEGFIP 250
Query: 202 DLSL---------------EALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTH 246
D+ E +F +M +S PN+VT+ AL+ AC ++G++ G H
Sbjct: 251 DVVAWNALISGFAQNHQFRETFTVFREMLVSGICPNQVTIAALLPACGSVGSVKWGREVH 310
Query: 247 CYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
++ R N F+ +AL+DMYSKCG L A +FD++ ++ +NAMI
Sbjct: 311 GFICRKGFDANVFIASALIDMYSKCGSLKDARNVFDKIQCKNVASWNAMI 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 20/177 (11%)
Query: 69 PTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYG 128
P V +N LIS F + + Q F+++ +L + PN T +L AC GS ++G
Sbjct: 250 PDVVAWNALISGF-AQNHQFRETFTVFREMLVS-GICPNQVTIAALLPAC-GSVGSVKWG 306
Query: 129 PPLHAHVLKFLEPPYDH--FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXX 186
+H + + +D F+ ++L++ Y+K G L +R +FD+I ++A+WN ++
Sbjct: 307 REVHGFICR---KGFDANVFIASALIDMYSKCGSLKDARNVFDKIQCKNVASWNAMIDC- 362
Query: 187 XXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
+ AL LF M+ +PNEVT ++SACS+ G++ +G+
Sbjct: 363 -----------FGKCGMVDSALELFTKMKEEGLQPNEVTFACILSACSHSGSVEKGL 408
>Medtr8g031210.1 | PPR containing plant-like protein | HC |
chr8:11676602-11671237 | 20130731
Length = 703
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 138/289 (47%), Gaps = 19/289 (6%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
++KLL+ C S ++ Q+H+Q L GL ++ ++ L + ++ AS + A +F P+ T
Sbjct: 7 LVKLLETCCSKLSISQLHSQCLKVGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHKT 66
Query: 71 VFLYNTLISSFTSHSSQIH---LAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
V+L+N L+ S+ + L + N +P++++ K+C G
Sbjct: 67 VYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIALKSCAGLRKLL-L 125
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G +H LK + D FV ++L++ Y K G++ + +F + +PD+ W +++
Sbjct: 126 GKMIHG-FLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGY- 183
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRR-RPNEVTLVALISACSNLGALSQGVWTH 246
E + AL F M +S + P+ VTLV++ SAC+ L G H
Sbjct: 184 -----------EQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVH 232
Query: 247 CYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAM 295
++ R L + +L+ +Y K G + A LF +++D+D ++ M
Sbjct: 233 GFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTM 281
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 134/275 (48%), Gaps = 21/275 (7%)
Query: 26 KQVHAQMLTTGLALHTYCLSH-LLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTS 83
+ VH + GL + CL++ LL + K S A +F + + + ++T+ + +
Sbjct: 229 RSVHGFVKRKGLD-NKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYAD 287
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC-CGSGHWFQYGPPLHAHVLKFLEPP 142
+ ++ + L+ +L K ++PN T S+ +AC C S + G +H + +
Sbjct: 288 NGAETDV-LDLFIEML-DKRIKPNWVTVVSVLRACACISN--LEEGMKIHELAVNY-GFE 342
Query: 143 YDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDAD 202
+ V +L++ Y K + F+++ + D+ W L D
Sbjct: 343 METTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYA------------DNG 390
Query: 203 LSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGT 262
+ E++++F +M S RP+ + LV +++ S LG L Q V H ++++N + N+F+G
Sbjct: 391 MVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGA 450
Query: 263 ALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+L+++Y+KC + A ++F +T +D ++++I
Sbjct: 451 SLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIA 485
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 125/279 (44%), Gaps = 22/279 (7%)
Query: 12 ILKLLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSK-LASTYALTIFSSIP 67
++ +L+ C ++ L++ +H + G + T + L+ + K + A+ F+ +P
Sbjct: 313 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP 372
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
V + L S + + + +H + ++ +L+ T +P++ + G Q
Sbjct: 373 KKDVIAWAVLFSGY-ADNGMVHESMWVFRNMLSSGT-RPDAIALVKILTTVSELG-ILQQ 429
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
HA V+K + F+ ASL+ YAK + + +F ++ D+ TW++++
Sbjct: 430 AVCFHAFVIKN-GFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYG 488
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACSNLGALSQGVWTH 246
EAL F M S +PN VT ++++SACS+ G + +G+
Sbjct: 489 FHGQGE------------EALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMF 536
Query: 247 CYLL-RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
++ + LK N +VD+ + G L++A L + +
Sbjct: 537 DIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNM 575
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 22/188 (11%)
Query: 114 LFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISE 173
L + CC Q LH+ LK + +D F+ L YA+Y + + LF +
Sbjct: 10 LLETCCSKLSISQ----LHSQCLK-VGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPH 64
Query: 174 PDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMS-----RRRPNEVTLVA 228
+ WN LL +E L LFC M+ +P+ ++
Sbjct: 65 KTVYLWNALLRSYCFEGEW------------VETLSLFCQMKNVCSVSIEEKPDNYSVSI 112
Query: 229 LISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRD 288
+ +C+ L L G H +L + + + FVG+AL+D+Y+KCG +N A ++F + D
Sbjct: 113 ALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPD 172
Query: 289 TFCYNAMI 296
+ +++
Sbjct: 173 VVLWTSIV 180
>Medtr8g031210.3 | PPR containing plant-like protein | HC |
chr8:11673838-11671237 | 20130731
Length = 703
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 138/289 (47%), Gaps = 19/289 (6%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
++KLL+ C S ++ Q+H+Q L GL ++ ++ L + ++ AS + A +F P+ T
Sbjct: 7 LVKLLETCCSKLSISQLHSQCLKVGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHKT 66
Query: 71 VFLYNTLISSFTSHSSQIH---LAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
V+L+N L+ S+ + L + N +P++++ K+C G
Sbjct: 67 VYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIALKSCAGLRKLL-L 125
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G +H LK + D FV ++L++ Y K G++ + +F + +PD+ W +++
Sbjct: 126 GKMIHG-FLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGY- 183
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRR-RPNEVTLVALISACSNLGALSQGVWTH 246
E + AL F M +S + P+ VTLV++ SAC+ L G H
Sbjct: 184 -----------EQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVH 232
Query: 247 CYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAM 295
++ R L + +L+ +Y K G + A LF +++D+D ++ M
Sbjct: 233 GFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTM 281
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 134/275 (48%), Gaps = 21/275 (7%)
Query: 26 KQVHAQMLTTGLALHTYCLSH-LLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTS 83
+ VH + GL + CL++ LL + K S A +F + + + ++T+ + +
Sbjct: 229 RSVHGFVKRKGLD-NKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYAD 287
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC-CGSGHWFQYGPPLHAHVLKFLEPP 142
+ ++ + L+ +L K ++PN T S+ +AC C S + G +H + +
Sbjct: 288 NGAETDV-LDLFIEML-DKRIKPNWVTVVSVLRACACISN--LEEGMKIHELAVNY-GFE 342
Query: 143 YDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDAD 202
+ V +L++ Y K + F+++ + D+ W L D
Sbjct: 343 METTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYA------------DNG 390
Query: 203 LSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGT 262
+ E++++F +M S RP+ + LV +++ S LG L Q V H ++++N + N+F+G
Sbjct: 391 MVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGA 450
Query: 263 ALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+L+++Y+KC + A ++F +T +D ++++I
Sbjct: 451 SLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIA 485
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 125/279 (44%), Gaps = 22/279 (7%)
Query: 12 ILKLLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSK-LASTYALTIFSSIP 67
++ +L+ C ++ L++ +H + G + T + L+ + K + A+ F+ +P
Sbjct: 313 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP 372
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
V + L S + + + +H + ++ +L+ T +P++ + G Q
Sbjct: 373 KKDVIAWAVLFSGY-ADNGMVHESMWVFRNMLSSGT-RPDAIALVKILTTVSELG-ILQQ 429
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
HA V+K + F+ ASL+ YAK + + +F ++ D+ TW++++
Sbjct: 430 AVCFHAFVIKN-GFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYG 488
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACSNLGALSQGVWTH 246
EAL F M S +PN VT ++++SACS+ G + +G+
Sbjct: 489 FHGQGE------------EALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMF 536
Query: 247 CYLL-RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
++ + LK N +VD+ + G L++A L + +
Sbjct: 537 DIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNM 575
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 22/188 (11%)
Query: 114 LFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISE 173
L + CC Q LH+ LK + +D F+ L YA+Y + + LF +
Sbjct: 10 LLETCCSKLSISQ----LHSQCLK-VGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPH 64
Query: 174 PDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMS-----RRRPNEVTLVA 228
+ WN LL +E L LFC M+ +P+ ++
Sbjct: 65 KTVYLWNALLRSYCFEGEW------------VETLSLFCQMKNVCSVSIEEKPDNYSVSI 112
Query: 229 LISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRD 288
+ +C+ L L G H +L + + + FVG+AL+D+Y+KCG +N A ++F + D
Sbjct: 113 ALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPD 172
Query: 289 TFCYNAMI 296
+ +++
Sbjct: 173 VVLWTSIV 180
>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1841187-1847304 | 20130731
Length = 880
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 136/295 (46%), Gaps = 28/295 (9%)
Query: 7 IFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST----YALTI 62
+ ++ ++ + KC SL V AQML + C + T+ S A+ A +
Sbjct: 99 VISNRLIHMYAKCGSL-----VDAQMLFDEIPQKDLCSWN--TMISGYANVGRIEQARKL 151
Query: 63 FSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSG 122
F +P+ F +N +IS + S + A L+ + +++ N FT S A
Sbjct: 152 FDEMPHRDNFSWNAVISGYVSQGWYME-ALDLFRMMQENESSNCNMFTLSSALAAAAAIS 210
Query: 123 HWFQYGPPLHAHVLK-FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
+ G +H ++++ LE D V +LL+ Y K G L +R +FDQ+++ D+ +W T
Sbjct: 211 S-LRRGKEIHGYLIRSGLE--LDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTT 267
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
++ ED E LF D+ S RPNE T +++AC++L A
Sbjct: 268 MIHRC-----------FEDG-RKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQM 315
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G H Y+ R F +ALV +YSKCG A ++F+Q+ D + ++I
Sbjct: 316 GKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLI 370
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 104/216 (48%), Gaps = 22/216 (10%)
Query: 101 HKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGR 160
H+ QP+ + +L AC + G +HAH P + L++ YAK G
Sbjct: 56 HRIPQPSPRLYSTLIAACL-RHRKLELGKRVHAHTKASNFIP-GIVISNRLIHMYAKCGS 113
Query: 161 LCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLED-----------ADLS----- 204
L ++ LFD+I + DL +WNT++ L D A +S
Sbjct: 114 LVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQ 173
Query: 205 ---LEALYLFCDMQMSRRRP-NEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFV 260
+EAL LF MQ + N TL + ++A + + +L +G H YL+R+ L+L+ V
Sbjct: 174 GWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVV 233
Query: 261 GTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
TAL+D+Y KCG LN A +FDQ+ D+D + MI
Sbjct: 234 WTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMI 269
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 126/275 (45%), Gaps = 19/275 (6%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSH 84
K++H ++ +GL L + LL + K S A IF + + + + T+I
Sbjct: 216 KEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFED 275
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
+ FSL+ R L ++PN +TF + AC Q G +H ++ + P+
Sbjct: 276 GRKKE-GFSLF-RDLMGSGVRPNEYTFAGVLNACADLAA-EQMGKEVHGYMTRVGYDPFS 332
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
F ++L++ Y+K G +R +F+Q+ PDL +W +L+ D+
Sbjct: 333 -FAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNG---------QPDM- 381
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV-WTHCYLLRNNLKLNRFVGTA 263
AL F + S +P+E+T V ++SAC++ G + G+ + H ++ L
Sbjct: 382 --ALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYAC 439
Query: 264 LVDMYSKCGCLNLACQLFDQLTDR-DTFCYNAMIG 297
++D+ ++ G A + D + + D F + +++G
Sbjct: 440 VIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLG 474
>Medtr4g083630.1 | PPR containing plant-like protein | HC |
chr4:32536076-32533157 | 20130731
Length = 708
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 129/282 (45%), Gaps = 18/282 (6%)
Query: 16 LQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLY 74
L+ C+ + + +VH L TY ++L+ +L A +F + +
Sbjct: 160 LRLCYDVEEVGRVHTIALKCFRGSSTYVDNNLICSYLRLGKLAQARKVFDGMSRRNTVTW 219
Query: 75 NTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAH 134
+I + + AF L++ + H +QPNS F CC G +HA
Sbjct: 220 TAIIDGYLKYDLDDE-AFKLFHGSIKH-GVQPNSKMFVCFMNLCCKRVD-LALGKQIHAR 276
Query: 135 VLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXX 194
+LK + V ++++NFY+K G++ + FD++++ D+ W T++
Sbjct: 277 ILK--SNWRNLIVDSAVVNFYSKCGKISSAFRTFDRMAKRDVVCWTTIITA--------- 325
Query: 195 XXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNL 254
L EAL L M + PNE T+ A + AC A G H +++
Sbjct: 326 ---CSQHGLGHEALLLLSQMLVDGFFPNEYTICAALKACGENKAFKCGTQLHGAIVKKIC 382
Query: 255 KLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
K + F+GT+L+DMY+KCG + + ++FD++ R+T + ++I
Sbjct: 383 KSDVFIGTSLIDMYAKCGEIVSSKKVFDRMKVRNTATWTSII 424
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 123/272 (45%), Gaps = 18/272 (6%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSH 84
KQ+HA++L + + S ++ SK + A F + V + T+I++ + H
Sbjct: 271 KQIHARILKSNWR-NLIVDSAVVNFYSKCGKISSAFRTFDRMAKRDVVCWTTIITACSQH 329
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
H A L +++L PN +T + KAC G F+ G LH ++K + D
Sbjct: 330 GLG-HEALLLLSQMLVDGFF-PNEYTICAALKAC-GENKAFKCGTQLHGAIVKKI-CKSD 385
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
F+ SL++ YAK G + S+ +FD++ + ATW +++
Sbjct: 386 VFIGTSLIDMYAKCGEIVSSKKVFDRMKVRNTATWTSIISGYARN------------GFG 433
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTAL 264
EAL F M+ + N+ TLV +++AC + A G H +++ + N ++ T L
Sbjct: 434 EEALNFFRLMKRKKVYVNKSTLVCVMTACGTIKASLIGREVHAQKIKSVILTNMYIETTL 493
Query: 265 VDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
V Y +C + A + + RD + A+I
Sbjct: 494 VWFYCRCKDYSHAFNVLKYIPLRDVVSWTAII 525
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 83/202 (41%), Gaps = 32/202 (15%)
Query: 97 RILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYA 156
R++ K + N T + AC G+ G +HA +K + + +++ +L+ FY
Sbjct: 441 RLMKRKKVYVNKSTLVCVMTAC-GTIKASLIGREVHAQKIKSV-ILTNMYIETTLVWFYC 498
Query: 157 KYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQM 216
+ + + I D+ +W ++ L EAL +M
Sbjct: 499 RCKDYSHAFNVLKYIPLRDVVSWTAIISGCARL------------GLETEALEFLREMME 546
Query: 217 SRRRPNEVTLVALISACSNLG--ALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCL 274
PN T + + AC+ L ALS N FV +AL+ MY+KCG +
Sbjct: 547 EGVLPNSYTYSSALKACAKLETPALS----------------NVFVNSALIYMYAKCGYI 590
Query: 275 NLACQLFDQLTDRDTFCYNAMI 296
A Q+FD + +R+ + AMI
Sbjct: 591 ADAFQVFDNMPERNLVSWKAMI 612
>Medtr7g078360.1 | PPR containing plant-like protein | HC |
chr7:29634869-29632890 | 20130731
Length = 632
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 58/274 (21%)
Query: 63 FSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSG 122
F +P +V +N ++S + + L+N +L+ +QP+ T+ ++ +C G
Sbjct: 208 FDKMPERSVVSWNAMLSGY-AQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLG 266
Query: 123 HWFQYGPPLHAHVLKFLEPPY----DHFVQASLLNF------------------------ 154
P L +++ L+ ++FV+ +LL+
Sbjct: 267 D-----PCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRS 321
Query: 155 ----------YAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
YA+ G L ++ LFD++ + D +WN+++ S
Sbjct: 322 SVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGE------------S 369
Query: 205 LEALYLFCDMQMSR--RRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGT 262
+A+ LF +M S R+P+EVT+V++ SAC +LG L G W L N+++++ V
Sbjct: 370 FKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYN 429
Query: 263 ALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+L++MYS+CG + A +F ++ RD YN +I
Sbjct: 430 SLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLI 463
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 118/274 (43%), Gaps = 59/274 (21%)
Query: 30 AQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSHSSQI 88
A +L +G Y + +L I +K +A +F +P+ TV +N +IS + ++
Sbjct: 108 AHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNE- 166
Query: 89 HLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQ 148
A +L++ ++ + + N T+ ++ +GH
Sbjct: 167 EEASTLFH-VMGDQEISRNVITWTTMI-----TGH------------------------- 195
Query: 149 ASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEAL 208
AK G L +R FD++ E + +WN +L E +
Sbjct: 196 -------AKKGNLKTARMYFDKMPERSVVSWNAMLSGYA------------QGGAPEETI 236
Query: 209 YLFCDM-QMSRRRPNEVTLVALISACSNLGA--LSQGVWTHCYLLRNNLKLNRFVGTALV 265
LF DM +P+E T +IS+CS+LG LS+ + + + N FV TAL+
Sbjct: 237 RLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESI-VRKLDDKVGFRPNYFVKTALL 295
Query: 266 DMYSKCGCLNLACQLFDQLTD---RDTFCYNAMI 296
DM++KCG L A ++F+QL R + +NAMI
Sbjct: 296 DMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMI 329
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 32/233 (13%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHK-TLQPNSFTFPSLFKA 117
A +F +P +N++I+ +T + A L+ +++ + + +P+ T S+F A
Sbjct: 341 AKHLFDKMPQRDTVSWNSMIAGYTQNGESFK-AIKLFEEMISSEDSRKPDEVTMVSVFSA 399
Query: 118 CC-----GSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQIS 172
C G G+W +LK V SL+N Y++ G + + +F +++
Sbjct: 400 CGHLGELGLGNWA-------VSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMA 452
Query: 173 EPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISA 232
DL ++NTL+ + +E++ L M+ P+ +T +A+++A
Sbjct: 453 TRDLVSYNTLI------------SGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTA 500
Query: 233 CSNLGALSQGVWTHCYLLRNNLKLNRFVGTA-LVDMYSKCGCLNLACQLFDQL 284
CS+ G L +G L ++K A ++DM + G L A +L +
Sbjct: 501 CSHAGLLDEG-----QRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSM 548
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 95/241 (39%), Gaps = 54/241 (22%)
Query: 56 STYALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLF 115
S+Y IF + +P V ++ ++ ++ + SL+ +L H ++PN+ + +
Sbjct: 37 SSYTCHIFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMM 96
Query: 116 KACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPD 175
K+ F AHVLK DH+V+ +L YAKYG + +R LFD++ +
Sbjct: 97 KSAGSESMLFL------AHVLKS-GYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRT 149
Query: 176 LATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSN 235
+A WN ++ L ++ D ++SR N +T +I+
Sbjct: 150 VADWNVMISGYWKCGNEEEASTL---------FHVMGDQEISR---NVITWTTMITG--- 194
Query: 236 LGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAM 295
++K G L A FD++ +R +NAM
Sbjct: 195 --------------------------------HAKKGNLKTARMYFDKMPERSVVSWNAM 222
Query: 296 I 296
+
Sbjct: 223 L 223
>Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:49468862-49466962 | 20130731
Length = 589
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 143/285 (50%), Gaps = 19/285 (6%)
Query: 16 LQKCHSLNTLKQV---HAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTV 71
+ K H+ N L HA ++ +GL+ T+ ++L+ KL +A +F + +P V
Sbjct: 30 IGKFHTFNHLPSATPTHANVVKSGLSNDTFTTNNLINSYLKLLKIDHAHKLFDEMSHPNV 89
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPL 131
++ L++ + Q ++A L++++ + PN FTF +L AC + + G +
Sbjct: 90 VSWSLLMAGYVRQG-QPNIALCLFHQMQG-TLVMPNEFTFSTLINACSILAN-LETGRRI 146
Query: 132 HAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXX 191
HA +++ D V +SL++ Y K R+ ++ +FD + ++ +W +++
Sbjct: 147 HA-LVEVFGYRSDLVVCSSLIDMYGKCNRVDEAQMIFDFMWVRNVVSWTSMITTYSQNG- 204
Query: 192 XXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLR 251
L+L+ F ++M++ PN L + ++AC++LG L G TH ++R
Sbjct: 205 --------QGHLALQLFREFNHIRMNK--PNHFMLCSAVTACASLGRLGSGKITHGVVIR 254
Query: 252 NNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ V +ALVDMY+KCGC+ + ++F ++ + Y +MI
Sbjct: 255 LGHDASDVVASALVDMYAKCGCVTYSDKVFRRIVNPSVVPYTSMI 299
>Medtr8g105210.1 | PPR containing plant-like protein | HC |
chr8:44370221-44373841 | 20130731
Length = 959
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 131/281 (46%), Gaps = 19/281 (6%)
Query: 18 KCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPTVFLYNT 76
K SL K+VH+ ++ G+ Y S L+ I K A F V +
Sbjct: 391 KSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTA 450
Query: 77 LISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVL 136
+IS + + + A +L+ R L + + PN T S+ AC + G LH +L
Sbjct: 451 MISGYVLNGLNVE-ALNLF-RWLIQEGMVPNCLTMASVLPACAALAS-LKLGKELHCDIL 507
Query: 137 K-FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXX 195
K LE V +S+ YAK GRL ++ F ++ D WN ++
Sbjct: 508 KKGLENVCQ--VGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFS-------- 557
Query: 196 XXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLK 255
++ L A+ LF M S + + V+L A +SAC+N AL G HC+++RN+
Sbjct: 558 ---QNGKPEL-AIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFI 613
Query: 256 LNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ FV + L+DMYSKCG L LA +FD + ++ +N++I
Sbjct: 614 SDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSII 654
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 130/283 (45%), Gaps = 37/283 (13%)
Query: 25 LKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYAL-TIFSSIPNPTVFL-------YNT 76
++Q+HA++L G+ + LT+ S++ Y L F + N L +N
Sbjct: 95 VRQIHAKVLVCGM-------NGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNW 147
Query: 77 LISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVL 136
LI F S A + R+L + P+ +TFP + KAC G + PL V
Sbjct: 148 LIRGF-SMLGCFDFALMFFFRMLG-SNVAPDKYTFPYVIKACGGLNN-----VPLCKMVH 200
Query: 137 KFLEPP---YDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXX 193
+ D F+ +SL+ Y G + ++ LFD++ D WN +L
Sbjct: 201 ELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGY------- 253
Query: 194 XXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNN 253
+++ D + AL F +M+ S +PN V+ V L+S C+ G + G+ H ++R+
Sbjct: 254 ----VKNGDFN-SALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSG 308
Query: 254 LKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ + V ++ MYSKCG L A ++FD + DT +N +I
Sbjct: 309 FESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLI 351
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 128/288 (44%), Gaps = 24/288 (8%)
Query: 15 LLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
+++ C LN + K VH + G + + S L+ + + + A +F +P
Sbjct: 183 VIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRD 242
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
L+N +++ + + + A + + + ++PNS +F L C G + G
Sbjct: 243 CILWNVMLNGYVKNG-DFNSALGTFQE-MRNSCVKPNSVSFVCLLSVCATRG-IVRAGIQ 299
Query: 131 LHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXX 188
LH V++ F P V +++ Y+K G L +R +FD + + D TWN L+
Sbjct: 300 LHGLVIRSGFESDPT---VANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYV- 355
Query: 189 XXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCY 248
+ EA+ LF M S + + +T + + + G+L H Y
Sbjct: 356 -----------QNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSY 404
Query: 249 LLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
++R+ + + ++ +ALVD+Y K G + +AC+ F Q T D AMI
Sbjct: 405 IVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMI 452
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 128/276 (46%), Gaps = 37/276 (13%)
Query: 15 LLQKCHSLNTLK---QVHAQMLTTGLALHTYC-----LSHLLTISSKLASTYALTIFSSI 66
+L C +L +LK ++H +L GL C ++++ S +L Y F +
Sbjct: 486 VLPACAALASLKLGKELHCDILKKGL--ENVCQVGSSITYMYAKSGRLDLAYQF--FRRM 541
Query: 67 PNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQ 126
P +N +I SF S + + LA L+ R + + +S + + AC +
Sbjct: 542 PVKDSVCWNLMIVSF-SQNGKPELAIDLF-RQMGTSGTKFDSVSLSATLSACANYPALY- 598
Query: 127 YGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLX 184
YG LH V++ F+ D FV ++L++ Y+K G+L ++R +FD + + +WN+++
Sbjct: 599 YGKELHCFVVRNSFIS---DTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIA 655
Query: 185 XXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVW 244
+ E L LF +M + +P+ VT + ++SAC + G + +G++
Sbjct: 656 AYG------------NHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIY 703
Query: 245 T-HCYLLRNNL--KLNRFVGTALVDMYSKCGCLNLA 277
C + ++ F +VD+Y + G L+ A
Sbjct: 704 YFRCMTEEYGICARMEHF--ACMVDLYGRAGRLHEA 737
>Medtr4g011730.1 | PPR containing plant-like protein | HC |
chr4:2939745-2937455 | 20130731
Length = 706
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 143/349 (40%), Gaps = 66/349 (18%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
I+K K S+ K VH +L TG H + ++ L+ + K+ A +F + +
Sbjct: 132 IIKSCSKIGSVGLCKIVHCHVLETGFKNHVHVVNELVGMYGKVRRMEDACKVFDGMVVRS 191
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSL---------------- 114
V +NTL+S + + + AF ++ R + + L+PN T+ SL
Sbjct: 192 VLSWNTLVSGYAFNFDYVG-AFRVFKR-MELEGLEPNYVTWTSLLSSHARCGLFDETMEL 249
Query: 115 FK------------------ACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYA 156
FK + C Q G +H V+K Y FV+ +L+ Y
Sbjct: 250 FKVMRIKGIEISGEAVAVVLSVCADMDGVQRGKEIHGFVIKGGYEDY-LFVKNALIGIYG 308
Query: 157 KYGR-LCVSRCLFDQISEPDLATWNTLLXXXXXXX----XXXXXXXLEDAD--------- 202
K L + +F I L +WN L+ LE ++
Sbjct: 309 KKREDLGDAHKIFSDIKNKSLVSWNALISSYADSGLCDDAYEVFLKLEKSNGHSPVRPNV 368
Query: 203 LSLEA--------------LYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCY 248
+S A L LF MQ+++ N VT+ +++S C+ L AL+ G H Y
Sbjct: 369 ISWSAVISGFASKGRLEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHAY 428
Query: 249 LLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+RN + N VG LV+MY KCG A +FD + RD +N++IG
Sbjct: 429 AIRNLMDDNILVGNGLVNMYMKCGVFEEAHLVFDNIKGRDLISWNSLIG 477
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 135/309 (43%), Gaps = 31/309 (10%)
Query: 15 LLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTV-- 71
L +C +L +Q+H Q++ T ++ + L+ S+ S + A IF++ P ++
Sbjct: 32 LHHQCFTLQQARQIHTQLILTTTHHSSFLSARLIATYSRFNSISEARKIFTTTPFESLSN 91
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPL 131
++N++I + SH + A +Y++++ L P+ FT P + K+C G +
Sbjct: 92 LVWNSIIRANVSHG-YYNYAVKIYHQMMKFGFL-PDGFTLPLIIKSCSKIGS-VGLCKIV 148
Query: 132 HAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX---- 187
H HVL+ + H V L+ Y K R+ + +FD + + +WNTL+
Sbjct: 149 HCHVLETGFKNHVHVVN-ELVGMYGKVRRMEDACKVFDGMVVRSVLSWNTLVSGYAFNFD 207
Query: 188 --XXXXXXXXXXLEDAD-----------------LSLEALYLFCDMQMSRRRPNEVTLVA 228
LE + L E + LF M++ + +
Sbjct: 208 YVGAFRVFKRMELEGLEPNYVTWTSLLSSHARCGLFDETMELFKVMRIKGIEISGEAVAV 267
Query: 229 LISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKC-GCLNLACQLFDQLTDR 287
++S C+++ + +G H ++++ + FV AL+ +Y K L A ++F + ++
Sbjct: 268 VLSVCADMDGVQRGKEIHGFVIKGGYEDYLFVKNALIGIYGKKREDLGDAHKIFSDIKNK 327
Query: 288 DTFCYNAMI 296
+NA+I
Sbjct: 328 SLVSWNALI 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 105/278 (37%), Gaps = 54/278 (19%)
Query: 6 PIFNHPILKLLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY--AL 60
I + +L C ++ + K++H ++ G + + + L+ I K A
Sbjct: 259 EISGEAVAVVLSVCADMDGVQRGKEIHGFVIKGGYEDYLFVKNALIGIYGKKREDLGDAH 318
Query: 61 TIFSSIPNPTVFLYNTLISSFTSHS--SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
IFS I N ++ +N LISS+ + F + H ++PN ++ ++
Sbjct: 319 KIFSDIKNKSLVSWNALISSYADSGLCDDAYEVFLKLEKSNGHSPVRPNVISWSAVISGF 378
Query: 119 CGSGHW----------------------------------FQYGPPLHAHVLKFLEPPYD 144
G G LHA+ ++ L +
Sbjct: 379 ASKGRLEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHAYAIRNLMDD-N 437
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
V L+N Y K G + +FD I DL +WN+L+ L
Sbjct: 438 ILVGNGLVNMYMKCGVFEEAHLVFDNIKGRDLISWNSLIGGYGMH------------GLG 485
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG 242
A+ F +M + RP+++T VA++SACS+ G ++ G
Sbjct: 486 ENAVRTFDEMINAGLRPDKITFVAVLSACSHAGLVAAG 523
>Medtr7g105540.1 | PPR containing plant-like protein | HC |
chr7:42802997-42805935 | 20130731
Length = 596
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 139/288 (48%), Gaps = 27/288 (9%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLA---STYALTIFSSIPN 68
I LL+ C + L+QVHA ++ GL +S+ +++++ L+ +Y+ +F+ + N
Sbjct: 18 ITTLLKACKRIQHLQQVHASIIQRGLEQDQVLISNFISLANTLSISTRSYSTAVFNRVLN 77
Query: 69 PTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYG 128
P+ FL+NT I + SS S + R+ A + P+S+T+PS+ KAC G+ G
Sbjct: 78 PSTFLWNTFIRTHC-QSSFFSDTISAFIRMKAEGAV-PDSYTYPSVIKACSGTCKVL-VG 134
Query: 129 PPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXX 188
+H V + D F+ +L++ Y K G++ +R +F++++E ++ +W ++
Sbjct: 135 KSVHGSVFR-CGLDQDLFMGTTLIDMYGKCGQISDARKVFNELTERNVVSWTAMVVGYVT 193
Query: 189 XXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCY 248
A ++A +F M + N + A+I +G LS
Sbjct: 194 ------------AGDVVKAKKVFDGMPLR----NVASWNAMIRGFVKVGDLSSARGVFDS 237
Query: 249 LLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ N+ T +VD Y+K G + + LF+Q ++D ++A+I
Sbjct: 238 MPEKNV----VSFTTMVDGYAKAGDMESSRFLFEQAAEKDVVTWSALI 281
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 13/148 (8%)
Query: 150 SLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALY 209
++++ YAK G + SR LF+Q +E D+ TW+ L+ +++ + + EAL
Sbjct: 248 TMVDGYAKAGDMESSRFLFEQAAEKDVVTWSALISGY-----------VQNGEAN-EALK 295
Query: 210 LFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNR-FVGTALVDMY 268
+F +M+ P+E LV L+SA S LG L Y+ N++ L + V +ALVDM
Sbjct: 296 VFLEMESMNVIPDEFVLVGLMSAASQLGDLKLAQRVDSYVGNNSIDLQKDHVISALVDMN 355
Query: 269 SKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+KCG + A +LF ++ +RD Y +MI
Sbjct: 356 AKCGNMERALKLFQEMPERDLVSYCSMI 383
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 27/202 (13%)
Query: 101 HKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVL-KFLEPPYDHFVQASLLNFYAKYG 159
H + +S +L KAC Q+ +HA ++ + LE Q + NF +
Sbjct: 8 HCSATRSSACITTLLKAC----KRIQHLQQVHASIIQRGLEQD-----QVLISNFISLAN 58
Query: 160 RLCVSR-----CLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDM 214
L +S +F+++ P WNT + + + F M
Sbjct: 59 TLSISTRSYSTAVFNRVLNPSTFLWNTFIRTHCQSSFFS------------DTISAFIRM 106
Query: 215 QMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCL 274
+ P+ T ++I ACS + G H + R L + F+GT L+DMY KCG +
Sbjct: 107 KAEGAVPDSYTYPSVIKACSGTCKVLVGKSVHGSVFRCGLDQDLFMGTTLIDMYGKCGQI 166
Query: 275 NLACQLFDQLTDRDTFCYNAMI 296
+ A ++F++LT+R+ + AM+
Sbjct: 167 SDARKVFNELTERNVVSWTAMV 188
>Medtr3g077200.1 | PPR containing plant-like protein | HC |
chr3:34651569-34656476 | 20130731
Length = 553
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 141/286 (49%), Gaps = 21/286 (7%)
Query: 14 KLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISS-KLASTYALTIFSSIPNPTVF 72
+L C SL +KQ+HA +L T L+ + + ++ + + YA +F +VF
Sbjct: 11 ELTNVCKSLLRVKQLHACLLKTHLSKDPFYATQIIRLYAFNNHINYAHHVFDKTSTRSVF 70
Query: 73 LYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYG--PP 130
L+N++I +F + + + A SL+ +L ++P+++T+ +AC S F +G
Sbjct: 71 LWNSMIRAF-AKARRFSNAISLFRTMLV-DDIRPDNYTYACAIRACADS---FDFGMLRV 125
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+H + + D ++L++ Y+K G + +R +FD I EPDL WN+L+
Sbjct: 126 VHGSAVS-VGLGLDPICCSALVSAYSKLGVVHEARRVFDGIVEPDLVLWNSLISAYGGSG 184
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
+ +F M+++ ++P+ TL L+ ++ LS G H
Sbjct: 185 MWEI------------GIQMFSSMRLAGKKPDGFTLAGLLGGIADSSLLSIGQELHGLSQ 232
Query: 251 RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
++ L + VG+ LV MYS+C C++ A ++F + + D ++A+I
Sbjct: 233 KSGLDSDCHVGSLLVSMYSRCKCIDSAYRVFCGIFNPDLVTWSALI 278
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 19/278 (6%)
Query: 21 SLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLIS 79
L+ VH ++ GL L C S L++ SKL + A +F I P + L+N+LIS
Sbjct: 119 DFGMLRVVHGSAVSVGLGLDPICCSALVSAYSKLGVVHEARRVFDGIVEPDLVLWNSLIS 178
Query: 80 SFTSHSSQIHLAFSLYNRI-LAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKF 138
++ S + +++ + LA K +P+ FT L S G LH K
Sbjct: 179 AYGG-SGMWEIGIQMFSSMRLAGK--KPDGFTLAGLLGGIADS-SLLSIGQELHGLSQKS 234
Query: 139 LEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXL 198
D V + L++ Y++ + + +F I PDL TW+ L+
Sbjct: 235 -GLDSDCHVGSLLVSMYSRCKCIDSAYRVFCGIFNPDLVTWSALISGYSQCGEYQ----- 288
Query: 199 EDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNR 258
+AL F + M ++ + V + ++++ + + + G H Y+LR+ L+ +
Sbjct: 289 -------KALLFFRKLNMKSKKLDSVLIATVLASITQMANVLPGCEIHGYVLRHGLESDV 341
Query: 259 FVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
V +AL+DMYSKCG L+L +F + +R+ YN+MI
Sbjct: 342 KVSSALIDMYSKCGFLHLGTCVFRIMLERNIISYNSMI 379
>Medtr7g078420.1 | PPR containing plant-like protein | HC |
chr7:29654282-29650656 | 20130731
Length = 646
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 123/273 (45%), Gaps = 57/273 (20%)
Query: 63 FSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSG 122
F +P +V +N ++S + + L+N +L+ +QP+ T+ ++ +C G
Sbjct: 223 FDKMPERSVVSWNAMLSGY-AQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLG 281
Query: 123 HWFQYGPPLHAHVLKFLEPPY----DHFVQASLLNF------------------------ 154
P L +++ L+ ++FV+ +LL+
Sbjct: 282 D-----PCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRS 336
Query: 155 ----------YAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
YA+ G L +R LFD++ + D +WN+++ S
Sbjct: 337 SVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGE------------S 384
Query: 205 LEALYLFCDMQMSR-RRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTA 263
++A+ LF +M S +P+EVT+V++ SAC +LG L G W L N+++++ V +
Sbjct: 385 VKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNS 444
Query: 264 LVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L+ MYS+CG + A +F ++ RD YN +I
Sbjct: 445 LISMYSRCGSMQDAVLIFQEMATRDLVSYNTLI 477
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 149/352 (42%), Gaps = 86/352 (24%)
Query: 15 LLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKL--ASTYALTIFSSIPNPTVF 72
++ K +L+ L+Q+HAQ++ L + + LLT ++L S+Y IF + +P V
Sbjct: 9 IVSKITNLHRLRQLHAQLVHHSLHHQNHWVVLLLTQCTRLLAPSSYTCHIFHAATHPDVR 68
Query: 73 LYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS----------- 121
++ ++ ++ + + SL+ +L H ++PN+ +F S+ GS
Sbjct: 69 VFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNT-SFYSVMMKSAGSESMLFLAHVLK 127
Query: 122 --------------GHWFQYGPPLHA---------------------------------- 133
G + +YGP A
Sbjct: 128 SGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTL 187
Query: 134 -HVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXX 192
HV+ E + +++ +AK G L +R FD++ E + +WN +L
Sbjct: 188 FHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYA----- 242
Query: 193 XXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACSNLGA--LSQGVWTHCYL 249
E + LF DM +P+E T V +IS+CS+LG LS+ +
Sbjct: 243 -------QGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESI---VRK 292
Query: 250 LRNNL--KLNRFVGTALVDMYSKCGCLNLACQLFDQLTD---RDTFCYNAMI 296
L + + + N FV TAL+DM++KCG L A ++F+QL R + +NAMI
Sbjct: 293 LDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMI 344
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 103/232 (44%), Gaps = 31/232 (13%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F +P +N++I+ +T + + A L+ +++ + +P+ T S+F AC
Sbjct: 356 ARHLFDKMPQRDTVSWNSMIAGYTQNGESVK-AIKLFEEMISSEDSKPDEVTMVSVFSAC 414
Query: 119 C-----GSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISE 173
G G+W +LK V SL++ Y++ G + + +F +++
Sbjct: 415 GHLGELGLGNWA-------VSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMAT 467
Query: 174 PDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISAC 233
DL ++NTL+ + +E++ L M+ P+ +T +A+++AC
Sbjct: 468 RDLVSYNTLI------------SGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTAC 515
Query: 234 SNLGALSQGVWTHCYLLRNNLKLNRFVGTA-LVDMYSKCGCLNLACQLFDQL 284
S+ G L +G L ++K A ++DM + G L A +L +
Sbjct: 516 SHAGLLGEG-----QRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSM 562
>Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:21642144-21644166 | 20130731
Length = 625
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 144/300 (48%), Gaps = 23/300 (7%)
Query: 5 NPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS----TYAL 60
P+ +L+ K +S + VHA +L +GL + + LLT+ KL ++A
Sbjct: 49 KPVIYASLLQTSVKTNSFHHGASVHAHVLKSGLHSDRFVGNSLLTLYFKLNPGPHLSHAR 108
Query: 61 TIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCG 120
+F S+ V + +LIS +T S H + SL+ +LA +QPN+FT S+ KAC
Sbjct: 109 HLFDSLHVKDVISWTSLISGYT-RSDLPHQSISLFYEMLAF-PVQPNAFTLSSVIKACSA 166
Query: 121 SGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQI-SEPDLATW 179
G H+ VL ++ V SL++ Y + +R +FD++ + D+ W
Sbjct: 167 LND-VNLGRCFHSMVLT-RGFDWNTVVSCSLIDMYGWNRAVDDARRVFDELFVKDDVFCW 224
Query: 180 NTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR-RPNEVTLVALISACSNLGA 238
+++ D+ E+L F M R P+ T +++AC+NLG
Sbjct: 225 TSIISCFTRN------------DMFKESLKFFYVMNRVRGVVPDGYTFGTILTACANLGL 272
Query: 239 LSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTD-RDTFCYNAMIG 297
L QG H ++ N V ++L+DMY KCGC+ + +F++L+D ++ + AM+G
Sbjct: 273 LRQGKEVHGKVVGLGFGGNVVVESSLLDMYGKCGCVRHSRIVFERLSDEKNNVSWTAMLG 332
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 134/292 (45%), Gaps = 33/292 (11%)
Query: 15 LLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISS-KLASTYALTIFSSI-PNP 69
+++ C +LN + + H+ +LT G +T L+ + A A +F +
Sbjct: 160 VIKACSALNDVNLGRCFHSMVLTRGFDWNTVVSCSLIDMYGWNRAVDDARRVFDELFVKD 219
Query: 70 TVFLYNTLISSFTSHS--SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
VF + ++IS FT + + F + NR+ + + P+ +TF ++ AC G +
Sbjct: 220 DVFCWTSIISCFTRNDMFKESLKFFYVMNRV---RGVVPDGYTFGTILTACANLG-LLRQ 275
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQIS-EPDLATWNTLLXXX 186
G +H V+ L + V++SLL+ Y K G + SR +F+++S E + +W +L
Sbjct: 276 GKEVHGKVVG-LGFGGNVVVESSLLDMYGKCGCVRHSRIVFERLSDEKNNVSWTAMLGVY 334
Query: 187 XXXXXXXXXXXL--EDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVW 244
L E DL+ A + ++ ACS L A++ G
Sbjct: 335 CQNKEYQNVLDLVRERGDLNFYAFGI------------------VLRACSGLAAVNHGKE 376
Query: 245 THCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
HC +R + + +ALVD+Y+KCG ++ AC +F + R+ +N+M+
Sbjct: 377 VHCMYVRKGGSKDVIIESALVDLYAKCGMVDFACTMFASMEVRNLITWNSMV 428
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 97/232 (41%), Gaps = 23/232 (9%)
Query: 15 LLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPT 70
+L C +L L+Q VH +++ G + S LL + K ++ +F + +
Sbjct: 263 ILTACANLGLLRQGKEVHGKVVGLGFGGNVVVESSLLDMYGKCGCVRHSRIVFERLSDEK 322
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+ T + + + L + N + F + +AC G +G
Sbjct: 323 NNVSWTAMLGVYCQNKEYQNVLDL-----VRERGDLNFYAFGIVLRACSGLAA-VNHGKE 376
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+H ++ D ++++L++ YAK G + + +F + +L TWN+++
Sbjct: 377 VHCMYVR-KGGSKDVIIESALVDLYAKCGMVDFACTMFASMEVRNLITWNSMVSG----- 430
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG 242
+EAL LF DM +P+ +T VA++ ACS+ G + +G
Sbjct: 431 -------FAQNGRGVEALALFEDMIKEGIKPDSITFVAVLFACSHAGLVDEG 475
>Medtr3g063220.1 | PPR containing plant-like protein | HC |
chr3:28610294-28607607 | 20130731
Length = 546
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 141/298 (47%), Gaps = 52/298 (17%)
Query: 27 QVHAQMLTT---------GLALHTYCLSHLL----TISSKLASTYAL--------TIFSS 65
+++A +L T G+ LH LL ISSKL YA +F
Sbjct: 112 EIYASLLETCYRFGAIHHGIWLHRLIPPALLHRNVGISSKLVRLYASFGYMDDAHDLFDQ 171
Query: 66 IPNPTV--FLYNTLISSFTS---HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCG 120
+ + F +N+LIS + + I L F + + ++P+ FTFP + K C G
Sbjct: 172 MTKRDMYAFPWNSLISGYAEMGLYDDAIALYFQM-----VEEGVEPDIFTFPRVLKVCGG 226
Query: 121 SGHWFQYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
G G +H HV++ F + D FV +L++ Y+K G + +R +F+++ D +
Sbjct: 227 IG-LVGVGEEVHRHVVRCGFWD---DGFVLNALVDMYSKCGDIVKARKIFNKMHFRDSVS 282
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
WN++L L +EA+ +F M + +P+ ++ A++++ S+L
Sbjct: 283 WNSMLTGYVRH------------GLEVEAINIFRQMVLKGEKPDYFSISAILTSVSSLDV 330
Query: 239 LSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
GV H +++R ++ N + +L+ YSK G L+ A +F+ + +RD +N++I
Sbjct: 331 ---GVQIHGWVIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLMPERDVVSWNSII 385
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 113/238 (47%), Gaps = 24/238 (10%)
Query: 7 IFNHP-ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFS 64
IF P +LK+ + ++VH ++ G + L+ L+ + SK A IF+
Sbjct: 214 IFTFPRVLKVCGGIGLVGVGEEVHRHVVRCGFWDDGFVLNALVDMYSKCGDIVKARKIFN 273
Query: 65 SIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHW 124
+ +N++++ + H ++ A +++ R + K +P+ F+ ++ +
Sbjct: 274 KMHFRDSVSWNSMLTGYVRHGLEVE-AINIF-RQMVLKGEKPDYFSISAILTSVSS---- 327
Query: 125 FQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLX 184
G +H V++ ++ + SL+ Y+K+GRL +R +F+ + E D+ +WN+++
Sbjct: 328 LDVGVQIHGWVIR-QGVEWNLSIANSLIIAYSKHGRLDKARSIFNLMPERDVVSWNSIIS 386
Query: 185 XXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG 242
EA+ F M+ + P+++T V+L+SAC++LG ++ G
Sbjct: 387 SHCKHP---------------EAISYFEKMEEAGEVPDKITFVSLLSACAHLGLVNDG 429
>Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:28350546-28353833 | 20130731
Length = 770
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 130/293 (44%), Gaps = 8/293 (2%)
Query: 9 NHPILKLLQKCHSLNTLK---QVHAQMLTTGLALHTYCLSHLLTISSKLAS--TYALTIF 63
N+ + L C SL++LK Q+HA ++ + T + L ++ +K LT F
Sbjct: 180 NYTLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAF 239
Query: 64 SSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
I V + IS+ + +L +QPN +T S CC
Sbjct: 240 RRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCC-EVK 298
Query: 124 WFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
+ G +HA K L + V+ SLL Y K G + ++ LF +++ +L TWN ++
Sbjct: 299 CLELGIQVHALCTK-LGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMI 357
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
L +EAL LF + S +P+ T +++S CS + AL QG
Sbjct: 358 AGHAQMMELSKDN-LSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGE 416
Query: 244 WTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H ++ + VG+++++MY+KCG + A ++F +++ R + MI
Sbjct: 417 QIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRTMILWTTMI 469
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 132/290 (45%), Gaps = 22/290 (7%)
Query: 15 LLQKCH---SLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
LLQ+C S ++ + +H ++ TG + S L+T+ +K A +F +
Sbjct: 84 LLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRN 143
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+ L+ + +S H A L+ +L H P+++T AC S H + G
Sbjct: 144 AVAWTNLMKGYVQNSMPKH-AIHLFEEMLLHSECYPSNYTLAIALNACT-SLHSLKLGEQ 201
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAK-YGRLCVSRCLFDQISEPDLATWNTLLXXXXXX 189
LHA+++K+ +D + +L + Y K G+L V F +I E D+ +W +
Sbjct: 202 LHAYIIKY-HVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACG-- 258
Query: 190 XXXXXXXXLEDADLSLEALYLFCDMQMS--RRRPNEVTLVALISACSNLGALSQGVWTHC 247
+ +++ + +F +M + + +PNE TL + +S C + L G+ H
Sbjct: 259 ----------EKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHA 308
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+ + N V +L+ +Y KCGC+ A +LF + D + +NAMI
Sbjct: 309 LCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIA 358
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 16/194 (8%)
Query: 105 QPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVS 164
+ +S +P L + C + F +H H++K D F+ + L+ YAK GR+ +
Sbjct: 75 EVDSSFYPPLLQQCLENCS-FSSTQIIHCHIVK-TGSHEDPFLSSFLVTVYAKCGRMECA 132
Query: 165 RCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQM-SRRRPNE 223
+ +FD ++ + W L+ + A++LF +M + S P+
Sbjct: 133 QQVFDHMNRRNAVAWTNLMKGYVQN------------SMPKHAIHLFEEMLLHSECYPSN 180
Query: 224 VTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGC-LNLACQLFD 282
TL ++AC++L +L G H Y+++ ++ + +G AL +Y+KCG L + F
Sbjct: 181 YTLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFR 240
Query: 283 QLTDRDTFCYNAMI 296
++ ++D + A I
Sbjct: 241 RIKEKDVISWTAAI 254
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 22/198 (11%)
Query: 91 AFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLK--FLEPPYDHFVQ 148
A +L+++ L ++P+ FTF S+ + C + G +HA +K FL D V
Sbjct: 380 ALNLFSK-LNRSGMKPDPFTFSSVL-SVCSKMMALEQGEQIHARTIKTGFLS---DVVVG 434
Query: 149 ASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEAL 208
+S++N Y K G + + +F ++S + W T++ S +AL
Sbjct: 435 SSMINMYNKCGSIERASKVFLEMSIRTMILWTTMITG------------FAQHGWSKQAL 482
Query: 209 YLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG--TALVD 266
LF DM++ RPN VT V ++SAC + G +++ + + +++ K+ + LVD
Sbjct: 483 NLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEA-FNYFEIMQKEYKIKPVMDHYVCLVD 541
Query: 267 MYSKCGCLNLACQLFDQL 284
M + G + A L ++
Sbjct: 542 MLVRLGQVQEAFDLIKKM 559
>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50925869-50923259 | 20130731
Length = 710
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 147/296 (49%), Gaps = 28/296 (9%)
Query: 8 FNHPILKLLQKCHSL---NTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALT-IF 63
F +PI+ ++ C L + VH Q G L+++ + LL + + A +F
Sbjct: 115 FTYPIV--IKACSELLFVDMGVGVHGQTAKCGFDLNSFVQNSLLAMYMNVGEKEAARLVF 172
Query: 64 SSIPNPTVFLYNTLISS-FTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSG 122
+ TV +NTLI+ F ++ ++ A +Y+R++ + + + T S+ +AC G
Sbjct: 173 ELMQERTVVSWNTLINGLFRNNCAED--ALRVYSRMV-DEGVGVDCATVVSVLQAC-GVL 228
Query: 123 HWFQYGPPLHAHVLKFLEPPY--DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWN 180
+ G + A L E Y + V+ +LL+ Y K G + +R L + + E D+ TW
Sbjct: 229 KNVELGREVRALTL---EKGYWGNVVVRNALLDMYVKCGEMEEARLLLNGMEEKDVVTWT 285
Query: 181 TLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALS 240
TL+ + D + AL L MQ+ +PN V++ +L+SAC +L +L
Sbjct: 286 TLINGYVV-----------NGD-ARSALMLCRSMQLEGVKPNLVSVASLLSACGDLVSLK 333
Query: 241 QGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G H + +R N++ + TAL+DMY+KC NL+ ++F + + + T +NA++
Sbjct: 334 HGKCLHAWAIRQNIESEVVMETALIDMYAKCNEGNLSYKVFMKTSKKRTAPWNAVL 389
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 131/295 (44%), Gaps = 30/295 (10%)
Query: 10 HPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYAL--------T 61
+L+ +SL+ K++HA ++T GL + S L SSKLA+TYA
Sbjct: 16 ESLLRKYSASNSLSETKKLHALIITYGL----FSSSQL---SSKLATTYAQCHHASYASQ 68
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS 121
+F +P +F +NT++ + + H A +++ +L P+ FT+P + KA C
Sbjct: 69 LFDKLPKRNLFSWNTMMRMYV-QMGRPHDALNMFVEMLHSGRAMPDHFTYPIVIKA-CSE 126
Query: 122 GHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
+ G +H K + FVQ SLL Y G +R +F+ + E + +WNT
Sbjct: 127 LLFVDMGVGVHGQTAK-CGFDLNSFVQNSLLAMYMNVGEKEAARLVFELMQERTVVSWNT 185
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
L+ L + + +AL ++ M + T+V+++ AC L +
Sbjct: 186 LI------------NGLFRNNCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNVEL 233
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G L N V AL+DMY KCG + A L + + ++D + +I
Sbjct: 234 GREVRALTLEKGYWGNVVVRNALLDMYVKCGEMEEARLLLNGMEEKDVVTWTTLI 288
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 130/291 (44%), Gaps = 22/291 (7%)
Query: 12 ILKLLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIP 67
++ +LQ C L + ++V A L G + + LL + K A + + +
Sbjct: 218 VVSVLQACGVLKNVELGREVRALTLEKGYWGNVVVRNALLDMYVKCGEMEEARLLLNGME 277
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
V + TLI+ + + + + R + + ++PN + SL AC G ++
Sbjct: 278 EKDVVTWTTLINGYVVNGDA--RSALMLCRSMQLEGVKPNLVSVASLLSAC-GDLVSLKH 334
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G LHA ++ + ++ +L++ YAK +S +F + S+ A WN +L
Sbjct: 335 GKCLHAWAIR-QNIESEVVMETALIDMYAKCNEGNLSYKVFMKTSKKRTAPWNAVLSGFV 393
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
L+ A+ LF +M + +P+ T +L+ A + L L Q + HC
Sbjct: 394 HNR------------LARNAVQLFKEMLLENVQPDSPTFNSLLPAYAILADLKQAMNMHC 441
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQ--LTDRDTFCYNAMI 296
YL++ V + LVD+YSKCG L A Q+FD L D+D + A+I
Sbjct: 442 YLVKLGFLCKLEVASMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWTAII 492
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 116/288 (40%), Gaps = 45/288 (15%)
Query: 12 ILKLLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSKL-ASTYALTIFSSIP 67
+ LL C L +LK +HA + + + L+ + +K + +F
Sbjct: 319 VASLLSACGDLVSLKHGKCLHAWAIRQNIESEVVMETALIDMYAKCNEGNLSYKVFMKTS 378
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
+N ++S F H+ A L+ +L + +QP+S TF SL A Q
Sbjct: 379 KKRTAPWNAVLSGFV-HNRLARNAVQLFKEMLL-ENVQPDSPTFNSLLPAYAILADLKQ- 435
Query: 128 GPPLHAHVLKF-----LEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQI--SEPDLATWN 180
+H +++K LE V + L++ Y+K G L + +FD I + D+ W
Sbjct: 436 AMNMHCYLVKLGFLCKLE------VASMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWT 489
Query: 181 TLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALS 240
++ A+ LF M S +PNEVT +++ ACS+ G +
Sbjct: 490 AIIDAYGKHGYGEM------------AVSLFNQMVQSGEKPNEVTFTSVLHACSHAGLVD 537
Query: 241 QGVWTHCYLLRNNLKLNRFVG-------TALVDMYSKCGCLNLACQLF 281
QG L NL L ++ T +VD+ + G LN A L
Sbjct: 538 QG------LSLFNLMLKKYQVIPSVDHYTCIVDLLGRAGRLNDAYNLI 579
>Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:44985847-44989750 | 20130731
Length = 912
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 142/299 (47%), Gaps = 31/299 (10%)
Query: 8 FNHPILKLLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIF 63
F L++L C+S N+LK+ +H+ ++ GL Y ++LL++ +K + A +F
Sbjct: 14 FQETCLRVLSFCNS-NSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLF 72
Query: 64 SSIPNPTVFLYNTLISSFTS--HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS 121
+PN V + T++SS T H S A L++ ++ PN FT S ++C
Sbjct: 73 DEMPNRDVVSWTTILSSHTKTKHHSD---ALQLFDMMIGSGEY-PNEFTLSSALRSCFAL 128
Query: 122 GHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQIS----EPDLA 177
G F+ G +H +K L + FV SL+ FY K G C S + +S D+
Sbjct: 129 GE-FERGMQIHCSAVK-LGLEMNRFVGTSLVEFYTKCG--CCSVEAWKLLSLVKDGGDVV 184
Query: 178 TWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLG 237
+W T+L +E+ EA ++ M S PNE T V L+ A S+
Sbjct: 185 SWTTMLSSL-----------VENGKWG-EAFEIYVKMIESGVYPNEFTFVKLLGAVSSFL 232
Query: 238 ALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
LS G H +L+ +LN + TA+VDMYSKC + A ++ + + D + + +I
Sbjct: 233 GLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLI 291
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 134/280 (47%), Gaps = 23/280 (8%)
Query: 21 SLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLA--STYALTIFSSIPNPTVFLYNTLI 78
SL+ +Q H++++ GL Y + L+ + K + +T A+ +F I +P V + +LI
Sbjct: 334 SLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLI 393
Query: 79 SSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP--LHAHVL 136
+ F ++ +F L+ + A ++PNSFT ++ AC + P LH H++
Sbjct: 394 AGFAE--KRLEDSFQLFAEMQA-AGVRPNSFTMSAILGACSKTRSLV---PTMMLHGHII 447
Query: 137 KFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXX 196
K + D V +L++ YA G + + + ++ D T+ L
Sbjct: 448 K-TKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHH---- 502
Query: 197 XLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKL 256
++L+ L C+ + + +E +L + +SA + LG + G HCY +++ +
Sbjct: 503 -----GMALKVLIHMCNDGI---KMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQR 554
Query: 257 NRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
V +LV +YSKCG ++ A + F +++ D F +N +I
Sbjct: 555 CHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLI 594
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 137/288 (47%), Gaps = 23/288 (7%)
Query: 16 LQKCHSLNTLK---QVHAQMLTTGLALHTYCLSHLLTISSKLA--STYALTIFSSIPNP- 69
L+ C +L + Q+H + GL ++ + + L+ +K S A + S + +
Sbjct: 122 LRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGG 181
Query: 70 TVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGP 129
V + T++SS + + AF +Y +++ + PN FTF L A S YG
Sbjct: 182 DVVSWTTMLSSLV-ENGKWGEAFEIYVKMI-ESGVYPNEFTFVKLLGAV-SSFLGLSYGK 238
Query: 130 PLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXX 189
LHAH++ F + ++ ++++ Y+K R+ + + + E D+ W TL+
Sbjct: 239 LLHAHLIMF-GAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQN 297
Query: 190 XXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYL 249
EA+ +F DM++S PN T +L++A S++ +L G H +
Sbjct: 298 LQVR------------EAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRV 345
Query: 250 LRNNLKLNRFVGTALVDMYSKCGCLNL-ACQLFDQLTDRDTFCYNAMI 296
+ L+ + ++G ALVDMY KC + A ++F ++T + C+ ++I
Sbjct: 346 IIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLI 393
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 26/197 (13%)
Query: 97 RILAH---KTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD--HFVQASL 151
++L H ++ + F+ S A G G + G LH + +K + H V SL
Sbjct: 507 KVLIHMCNDGIKMDEFSLASFLSAAAGLGT-METGKQLHCYSVK---SGFQRCHSVSNSL 562
Query: 152 LNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLF 211
++ Y+K G + + F ISEPD +WN L+ L AL F
Sbjct: 563 VHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWN------------GLISHALSTF 610
Query: 212 CDMQMSRRRPNEVTLVALISACSNLGALSQGV-WTHCYLLRNNL--KLNRFVGTALVDMY 268
DM+++ +P+ +TL++LISACS+ G L G+ + H ++ KL+ ++ LVD+
Sbjct: 611 DDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYM--CLVDLL 668
Query: 269 SKCGCLNLACQLFDQLT 285
+ G L A + ++++
Sbjct: 669 GRGGRLEEAMGVIEKMS 685
>Medtr4g074150.2 | PPR containing plant-like protein | HC |
chr4:28198214-28202779 | 20130731
Length = 606
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 109/239 (45%), Gaps = 17/239 (7%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F P + + LI+ F + L K + + FT S+ +A
Sbjct: 160 ACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRL--KGVVIDGFTVASVLRAA 217
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRC-LFDQISEPDLA 177
G + +G +H ++ D V +L++ Y K G C C +FD++ D+
Sbjct: 218 ALVGDYC-FGKRVHGFYVETGRVVLDGSVYCALVDMYFKCG-YCEDACKVFDEMPYRDVV 275
Query: 178 TWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLG 237
W ++ +AL F M + PNE TL +++SAC+++G
Sbjct: 276 AWTVVVAGFVQCKKYQ------------DALSFFRRMLLDNVVPNEFTLTSVLSACAHVG 323
Query: 238 ALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
AL QG H Y+ N+ LN +GT+LVDMY+KCGC++ A +F+ L ++ + AMI
Sbjct: 324 ALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMI 382
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 29/233 (12%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F +P V + +++ F + A S + R+L + PN FT S+ AC
Sbjct: 262 ACKVFDEMPYRDVVAWTVVVAGFV-QCKKYQDALSFFRRMLLDNVV-PNEFTLTSVLSAC 319
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCL--FDQISEPDL 176
G Q G +H + ++ + + + SL++ YAK G CV + L F+ + ++
Sbjct: 320 AHVGALDQ-GRLVHRY-MEHNDCNLNAVLGTSLVDMYAKCG--CVDKALMVFENLQVKNV 375
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
TW ++ +L AL +F M S RPN+VT + ++ ACS+
Sbjct: 376 HTWTAMINGLAVHGD------------ALGALNIFSRMLESGLRPNDVTFLGVLGACSHG 423
Query: 237 GALSQG-----VWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
G + +G + H Y L+ N++ +VD+ + GCL A Q+ D +
Sbjct: 424 GFVDEGKKLFEMMRHTYHLKPNMEHY----GCMVDLLGRAGCLEDAKQIIDNM 472
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 131/294 (44%), Gaps = 28/294 (9%)
Query: 10 HPILKLLQKCHSLNTLKQVHAQMLTTGL-----ALHTYCLSHLLTISSKLASTYALTIFS 64
+ I L + +L Q+ + ++T+GL A+ L +S S+ L + +
Sbjct: 9 NAIASLSKNHQNLKQWNQIQSTIITSGLYTLQDAIFVAKLIQCAPLSQPQTSSLRL-LLN 67
Query: 65 SIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHW 124
+I P L+N LI+SF + L+++ + + +QP+ TFP L K +G
Sbjct: 68 TIHTPNTRLFNKLITSFPKTTL---LSYAKMHEM----GVQPDKHTFPLLLKIFSKNGVP 120
Query: 125 FQYGP-PLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
+ P ++A V K L +D FV ++ + G + + +FD+ E D+ W L+
Sbjct: 121 NDHLPFMVYAQVFK-LGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALI 179
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
+ EAL F +M++ + T+ +++ A + +G G
Sbjct: 180 NGFVKN------------GVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGK 227
Query: 244 WTHC-YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H Y+ + L+ V ALVDMY KCG AC++FD++ RD + ++
Sbjct: 228 RVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVV 281
>Medtr4g074150.1 | PPR containing plant-like protein | HC |
chr4:28198256-28202779 | 20130731
Length = 606
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 109/239 (45%), Gaps = 17/239 (7%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F P + + LI+ F + L K + + FT S+ +A
Sbjct: 160 ACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRL--KGVVIDGFTVASVLRAA 217
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRC-LFDQISEPDLA 177
G + +G +H ++ D V +L++ Y K G C C +FD++ D+
Sbjct: 218 ALVGDYC-FGKRVHGFYVETGRVVLDGSVYCALVDMYFKCG-YCEDACKVFDEMPYRDVV 275
Query: 178 TWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLG 237
W ++ +AL F M + PNE TL +++SAC+++G
Sbjct: 276 AWTVVVAGFVQCKKYQ------------DALSFFRRMLLDNVVPNEFTLTSVLSACAHVG 323
Query: 238 ALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
AL QG H Y+ N+ LN +GT+LVDMY+KCGC++ A +F+ L ++ + AMI
Sbjct: 324 ALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMI 382
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 105/233 (45%), Gaps = 29/233 (12%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F +P V + +++ F + A S + R+L + PN FT S+ AC
Sbjct: 262 ACKVFDEMPYRDVVAWTVVVAGFV-QCKKYQDALSFFRRMLLDNVV-PNEFTLTSVLSAC 319
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCL--FDQISEPDL 176
G Q G +H + ++ + + + SL++ YAK G CV + L F+ + ++
Sbjct: 320 AHVGALDQ-GRLVHRY-MEHNDCNLNAVLGTSLVDMYAKCG--CVDKALMVFENLQVKNV 375
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
TW ++ +L AL +F M S RPN+VT + ++ ACS+
Sbjct: 376 HTWTAMINGLAVHGD------------ALGALNIFSRMLESGLRPNDVTFLGVLGACSHG 423
Query: 237 GALSQG-----VWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
G + +G + H Y L+ N++ +VD+ + GCL A Q+ D +
Sbjct: 424 GFVDEGKKLFEMMRHTYHLKPNMEHY----GCMVDLLGRAGCLEDAKQIIDNM 472
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 131/294 (44%), Gaps = 28/294 (9%)
Query: 10 HPILKLLQKCHSLNTLKQVHAQMLTTGL-----ALHTYCLSHLLTISSKLASTYALTIFS 64
+ I L + +L Q+ + ++T+GL A+ L +S S+ L + +
Sbjct: 9 NAIASLSKNHQNLKQWNQIQSTIITSGLYTLQDAIFVAKLIQCAPLSQPQTSSLRL-LLN 67
Query: 65 SIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHW 124
+I P L+N LI+SF + L+++ + + +QP+ TFP L K +G
Sbjct: 68 TIHTPNTRLFNKLITSFPKTTL---LSYAKMHEM----GVQPDKHTFPLLLKIFSKNGVP 120
Query: 125 FQYGP-PLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
+ P ++A V K L +D FV ++ + G + + +FD+ E D+ W L+
Sbjct: 121 NDHLPFMVYAQVFK-LGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALI 179
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
+ EAL F +M++ + T+ +++ A + +G G
Sbjct: 180 NGFVKN------------GVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGK 227
Query: 244 WTHC-YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H Y+ + L+ V ALVDMY KCG AC++FD++ RD + ++
Sbjct: 228 RVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVV 281
>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
chr7:19429810-19428206 | 20130731
Length = 534
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 129/302 (42%), Gaps = 78/302 (25%)
Query: 58 YALTIFSSIPNPTVFLYNTLISS-FTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFK 116
+A++ F+ I P +YN LI + SHSS L ++ + ++ P+S++F SL K
Sbjct: 30 FAISTFTQITKPNTLVYNALIKACVHSHSSNQALLHYIH---MLRSSVIPSSYSFSSLIK 86
Query: 117 ACC-------GS---GHWFQYGPPLHAHV------------------------------- 135
AC G GH ++YG H V
Sbjct: 87 ACTLLTDAVNGKTLHGHVWKYGFDSHVFVQTTLVEFYSSLGYVCDARKVFDEMSARDVYA 146
Query: 136 ------------------LKFLEPPYDHFVQA--SLLNFYAKYGRLCVSRCLFDQISEPD 175
+ F+E P ++++ YAK G + F +I D
Sbjct: 147 WTTMISAYVRNNDVESAEILFVEMPEGKNTATWNAVIDGYAKLGNIERVEFFFKEIPSKD 206
Query: 176 LATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACS 234
+ +W TL+ E + LF +M + P+EV + +ISAC+
Sbjct: 207 IISWTTLMSCYLKNKRYG------------EVVKLFHEMVNEGKVVPDEVAITTVISACA 254
Query: 235 NLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNA 294
+LGAL G H YL+ + ++ ++G++L+DMY+KCG L + +F +L +++ FC+N+
Sbjct: 255 HLGALGFGKEVHFYLMVSGFGIDVYIGSSLIDMYAKCGSLERSLLVFYKLKEKNLFCWNS 314
Query: 295 MI 296
MI
Sbjct: 315 MI 316
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 114/238 (47%), Gaps = 21/238 (8%)
Query: 63 FSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSG 122
F IP+ + + TL+S + + + L++ ++ + P+ ++ AC G
Sbjct: 199 FKEIPSKDIISWTTLMSCYLKNKRYGEVV-KLFHEMVNEGKVVPDEVAITTVISACAHLG 257
Query: 123 HWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTL 182
+G +H +++ D ++ +SL++ YAK G L S +F ++ E +L WN++
Sbjct: 258 A-LGFGKEVHFYLM-VSGFGIDVYIGSSLIDMYAKCGSLERSLLVFYKLKEKNLFCWNSM 315
Query: 183 LXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG 242
+ L + EAL +F +M+ RPN VT V++++AC++ G + +G
Sbjct: 316 IDG------------LAAHGYAKEALRMFAEMEREGIRPNRVTFVSVLTACTHAGFIQEG 363
Query: 243 VWTHCYLLRN---NLKLNRFVGTALVDMYSKCGCLNLACQLFDQLT-DRDTFCYNAMI 296
++ + + ++ + +VD+ SK G L A ++ + + ++F + A++
Sbjct: 364 RRFFTSMIEDYCISPQVEHY--GCMVDLLSKGGLLEDALEMIRGMRFEPNSFIWGALL 419
>Medtr5g024100.1 | PPR containing plant-like protein | HC |
chr5:9654442-9656866 | 20130731
Length = 754
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 125/272 (45%), Gaps = 20/272 (7%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSKLASTY--ALTIFSSIPNPTVFLYNTLISSFTSH 84
Q+H ++ GL + S L+ + K AL +F + V +N +IS F +
Sbjct: 129 QIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGF-AQ 187
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
+ + L++ + + L+P+ TF SL K C Q +H V KF D
Sbjct: 188 NGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCSVLNEVMQ----IHGIVYKF-GAEVD 242
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
V++++++ YAK + R +FD + + D W++++ +
Sbjct: 243 VVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMN------------NRG 290
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTAL 264
EA+ F DM R + ++ L + + AC + L+ GV H +++N + + FV + L
Sbjct: 291 EEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVL 350
Query: 265 VDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+++Y+ G L +LF ++ D+D +N+MI
Sbjct: 351 LNLYASFGELGDVEKLFSRIDDKDIVAWNSMI 382
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 143/299 (47%), Gaps = 37/299 (12%)
Query: 2 KAQNPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYAL 60
K NPI +L +C+ Q+HAQ++ T T+ + LL+ SK ++ YA
Sbjct: 16 KKSNPI-------ILTQCN------QIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAH 62
Query: 61 TIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCG 120
+F +PN V + TLISS + S + AF ++N + +PN TF L +AC
Sbjct: 63 KLFDKMPNRNVVTWTTLISSHLKYGS-VSKAFEMFNHMRVSDE-RPNENTFAVLLRACTN 120
Query: 121 SGHWFQYGPPLHAHVLK-FLEPPYDHFVQASLLNFYAKYG-RLCVSRCLFDQISEPDLAT 178
W G +H +++ LE + F +SL+ Y K G L + +F + E D+
Sbjct: 121 RELW-SVGLQIHGLLVRCGLER--EKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVA 177
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACSNLG 237
WN ++ ++ D + LF +M + +P+ +T +L+ CS L
Sbjct: 178 WNVMISGFA-----------QNGDFRM-VQRLFSEMWEEQGLKPDRITFASLLKCCSVLN 225
Query: 238 ALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ Q H + + +++ V +A+VD+Y+KC ++ ++FD + +D F +++MI
Sbjct: 226 EVMQ---IHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMI 281
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 124/285 (43%), Gaps = 15/285 (5%)
Query: 13 LKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALT-IFSSIPNPTV 71
LK + LNT QVH M+ G + S LL + + + +FS I + +
Sbjct: 316 LKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDI 375
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPL 131
+N++I + L+ + LQ T ++ K+C G +
Sbjct: 376 VAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSD-LPAGRQI 434
Query: 132 HAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXX 191
H+ ++K + V +L++ Y++ ++ + F I D ++W++++
Sbjct: 435 HSLIVKSSLCRHT-LVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGT------ 487
Query: 192 XXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLR 251
+ + +AL L +M +L ISACS L +S+G H + ++
Sbjct: 488 ------CKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIK 541
Query: 252 NNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ + ++G++++DMY+KCG + + ++FD+ + +NA+I
Sbjct: 542 SGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAII 586
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 122/279 (43%), Gaps = 26/279 (9%)
Query: 11 PILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNP 69
+LK +K L +Q+H+ ++ + L HT + L+ + S+ A F I
Sbjct: 417 AVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRK 476
Query: 70 TVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGP 129
++++I + + + A L +L + + S++ P L + C G
Sbjct: 477 DDSSWSSIIGTCKQNRMESK-ALELCKEML-DEGINFTSYSLP-LCISACSQLLTISEGK 533
Query: 130 PLHAHVLKFLEPPY--DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
LH +K Y D ++ +S+++ YAK G + S +FD+ +P+ T+N ++
Sbjct: 534 QLHVFAIK---SGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYA 590
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
+ +A+ + ++ + PN VT +AL+SACS+ G + + +H
Sbjct: 591 HHGK------------AQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEET--SHL 636
Query: 248 YLL---RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQ 283
+ L + +K + LVD Y + G L A Q+ +
Sbjct: 637 FTLMLDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQIVQK 675
>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:14398657-14402125 | 20130731
Length = 960
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 123/257 (47%), Gaps = 19/257 (7%)
Query: 42 YCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSHSSQIH-LAFSLYNRIL 99
+C + ++ S++ Y AL IF+ +P +NTLIS F+ H + LA + +
Sbjct: 213 FCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVE---M 269
Query: 100 AHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYG 159
++ PN T+ S+ AC + ++G LHA +L+ +E D L++ YAK G
Sbjct: 270 CNQGFSPNFMTYGSVLSACASTSD-LKWGAHLHARILR-MEHSLDLVFGNGLIDMYAKCG 327
Query: 160 RLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR 219
L +++ +F + E D +WN+L+ L +AL LF M+ S
Sbjct: 328 CLDLAKRVFKSLREHDHISWNSLITGVVHF------------GLGEDALILFNQMRRSSV 375
Query: 220 RPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQ 279
+E L ++ CS S G H Y +++ + + VG A++ MY+KCG + A
Sbjct: 376 VLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADL 435
Query: 280 LFDQLTDRDTFCYNAMI 296
+F + R+T + AMI
Sbjct: 436 VFRLMPLRNTISWTAMI 452
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 130/316 (41%), Gaps = 49/316 (15%)
Query: 15 LLQKCHSLNTLK---QVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
+L C S + LK +HA++L +L + L+ + +K A +F S+
Sbjct: 284 VLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHD 343
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+N+LI+ H A L+N+ + ++ + F P++ C G + G
Sbjct: 344 HISWNSLITGVV-HFGLGEDALILFNQ-MRRSSVVLDEFILPTILGVCSGP-DYASTGEL 400
Query: 131 LHAHVLK------------------------------FLEPPYDHFVQASLLNFYAKYGR 160
LH + +K L P + +++ +++ G
Sbjct: 401 LHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGD 460
Query: 161 LCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRR 220
+ +R FD + E ++ TWN++L S E L L+ M+ + +
Sbjct: 461 IGKARGYFDMMPERNIVTWNSMLSTYVQN------------GFSEEGLKLYVSMRSNGVQ 508
Query: 221 PNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQL 280
P+ +T I AC++L + G+ + + L LN V ++V MYS+CG + A
Sbjct: 509 PDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNT 568
Query: 281 FDQLTDRDTFCYNAMI 296
FD + D+D +NAM+
Sbjct: 569 FDSIDDKDLISWNAML 584
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 85/184 (46%), Gaps = 16/184 (8%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A F +P + +N+++S++ + LY + ++ +QP+ TF + +AC
Sbjct: 464 ARGYFDMMPERNIVTWNSMLSTYVQNGFS-EEGLKLYVSMRSNG-VQPDWITFTTSIRAC 521
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
+ G + H KF + V S++ Y++ G + ++ FD I + DL +
Sbjct: 522 ADLA-IVKLGMQVVTHATKF-GLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLIS 579
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
WN +L L ++ + F DM + +PN ++ V+++S CS++G
Sbjct: 580 WNAMLAA------------FAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGL 627
Query: 239 LSQG 242
+++G
Sbjct: 628 VAEG 631
>Medtr2g094420.1 | PPR containing plant-like protein | HC |
chr2:40258178-40258792 | 20130731
Length = 204
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 15/197 (7%)
Query: 101 HKT-LQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYG 159
HK + P+SFTF + KAC + F G +H+ V K D FV+ +++ FY+K G
Sbjct: 22 HKAAIVPDSFTFSFVLKAC-ARLNLFHLGMMMHSLVFK-TGFDCDVFVKTNVVCFYSKCG 79
Query: 160 RLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR 219
L + +FD + ++ +W ++ EA+YLF + S
Sbjct: 80 FLKDAWKMFDDMVVKNIVSWTGMICGCIEFGKFR------------EAVYLFRGLLESGL 127
Query: 220 RPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQ 279
RP+ +V ++ AC+ LG L G W L L N FV T+LVDMY+KCG + A
Sbjct: 128 RPDGFVIVRVLRACARLGDLDSGRWIDRCLRDCGLSRNVFVATSLVDMYTKCGSMEEARF 187
Query: 280 LFDQLTDRDTFCYNAMI 296
+FD + ++D C++ MI
Sbjct: 188 VFDGMVEKDVVCWSVMI 204
>Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1959596-1956593 | 20130731
Length = 831
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 118/235 (50%), Gaps = 16/235 (6%)
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS 121
IF + +P++ +N ++S + + S+ A L+ R + + P+ T + +C
Sbjct: 374 IFDCMSSPSLISWNAILSGY-NQSADHGEAVELF-RKMQFQWQNPDRTTLAIILSSCAEL 431
Query: 122 GHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
G + G +HA V + L D +V +SL+N Y+K G++ VS+ +F ++SE D+ WN+
Sbjct: 432 G-LLEAGKQVHA-VSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNS 489
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
++ L +AL F M+ P+E + + S+C+ L +L Q
Sbjct: 490 MIAGFSINS------------LEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQ 537
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G H ++++ N FVG++LV+MY KCG + A FD + ++ +N MI
Sbjct: 538 GQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMI 592
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 130/282 (46%), Gaps = 27/282 (9%)
Query: 15 LLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
+L C L L KQVHA G Y S L+ + SK + +FS +
Sbjct: 424 ILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELD 483
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
V +N++I+ F+ +S + A + + R+ P+ F+F ++ +C FQ G
Sbjct: 484 VVCWNSMIAGFSINSLE-QDALACFKRMRQFGFF-PSEFSFATIASSCAKLSSLFQ-GQQ 540
Query: 131 LHAHVLKFLEPPYDH-FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXX 189
+HA ++K + D+ FV +SL+ Y K G + +R FD + ++ TWN ++
Sbjct: 541 IHAQIIK--DGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHN 598
Query: 190 XXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYL 249
LEA+ L+ DM S +P+++T VA+++ACS+ + +GV +
Sbjct: 599 G------------YGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSM 646
Query: 250 LRNNL---KLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRD 288
L+ KL+ + T ++D + G N + D + +D
Sbjct: 647 LQKFEVVPKLDHY--TCIIDCLGRVGRFNEVEVILDTMPYKD 686
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 117/273 (42%), Gaps = 52/273 (19%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSH 84
KQ+H + G + + LL + +K A +F ++ +V +N +IS +
Sbjct: 271 KQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYG-- 328
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
NR + K L+ F + CCG Y P D
Sbjct: 329 -----------NRCDSEKALE----CFQRM--QCCG------YEP--------------D 351
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
++L K G + V R +FD +S P L +WN +L + AD
Sbjct: 352 DVTYINMLTACVKSGDVKVGRQIFDCMSSPSLISWNAILSGYN-----------QSADHG 400
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTAL 264
EA+ LF MQ + P+ TL ++S+C+ LG L G H + + +V ++L
Sbjct: 401 -EAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSL 459
Query: 265 VDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+++YSKCG + ++ +F +L++ D C+N+MI
Sbjct: 460 INVYSKCGKMEVSKHVFSKLSELDVVCWNSMIA 492
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 139/331 (41%), Gaps = 60/331 (18%)
Query: 12 ILKLLQKC---HSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIP 67
++ LLQ C SL++ K +HA++ L T+ +HL+ + SK T A +F IP
Sbjct: 8 LINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIP 67
Query: 68 NPTVFLYNTLISSFTSHSSQIHL------------------------------AFSLYNR 97
+ +F YN ++S+F ++ + A Y+
Sbjct: 68 HKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDL 127
Query: 98 ILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAK 157
++ +++++P+ TF ++F AC G G H VLK + + +V +LL Y K
Sbjct: 128 MMVYESVKPSHITFATVFSACGGLKD-VNCGRRNHGLVLK-VGFDSNIYVSNALLCMYTK 185
Query: 158 YGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMS 217
G + +F+ I EP+ T+ T++ L + E L LF M
Sbjct: 186 CGLNEDAFRVFEGIVEPNEVTFTTMMGG------------LSQTNQVKEGLELFRLMLRK 233
Query: 218 RRRPNEVTLVALISACS------------NLGALSQGVWTHCYLLRNNLKLNRFVGTALV 265
+ V+L ++ C+ L +QG H +++ + + + +L+
Sbjct: 234 GICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLL 293
Query: 266 DMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
DMY+K G ++ A +F+ L +N MI
Sbjct: 294 DMYAKTGDMDSAENVFENLDKHSVVSWNIMI 324
>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:38114703-38117150 | 20130731
Length = 616
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 138/299 (46%), Gaps = 37/299 (12%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSH 84
K++HAQ++ +GL H L+ K AL +F ++P + T++S+ +
Sbjct: 28 KKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSA-CNL 86
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACC--GSGHWFQYGPPLHAHVLKFLEPP 142
S+ H AFS+ IL H+ LQP+ F F SL KAC GS H + G LHA +FL P
Sbjct: 87 SNLPHKAFSISLPIL-HEGLQPDHFVFSSLIKACANLGSVH-VKLGKQLHA---RFLLSP 141
Query: 143 Y--DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXX----- 195
+ D V++SL++ YAK+ R +FD I E +W ++
Sbjct: 142 FFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFR 201
Query: 196 --------------XXLEDADLSLEALYLFCDMQMSRRR----PNEVTLVALISACSNLG 237
L + + +ALYLF +M RR + + L +++ AC+N
Sbjct: 202 ESPFKNLYAWTALISGLVQSGNANDALYLFVEM---RREGVSIADPLVLSSVVGACANSA 258
Query: 238 ALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G HC ++ + F+ ALVDMY+KC + A +F ++ +D + ++I
Sbjct: 259 VRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSII 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 20/226 (8%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
AL +F P ++ + LIS S + A L+ + + S+ AC
Sbjct: 196 ALELFRESPFKNLYAWTALISGLV-QSGNANDALYLFVEMRREGVSIADPLVLSSVVGAC 254
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDH--FVQASLLNFYAKYGRLCVSRCLFDQISEPDL 176
S + G +H V+ Y+ F+ +L++ YAK + ++ +F ++ D+
Sbjct: 255 ANSA-VRELGKQVHCVVITL---GYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDV 310
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
+W +++ L+ EAL L+ DM ++ +PNEVT V LI ACS++
Sbjct: 311 VSWTSIIVGTAQH------------GLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHV 358
Query: 237 GALSQGVWTHCYLLRN-NLKLNRFVGTALVDMYSKCGCLNLACQLF 281
G +S+G ++ + ++ + T L+D++S+ G L+ A L
Sbjct: 359 GLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLI 404
>Medtr5g008690.1 | PPR containing plant-like protein | HC |
chr5:1878296-1873339 | 20130731
Length = 764
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 143/317 (45%), Gaps = 32/317 (10%)
Query: 7 IFNHPILKLLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIF 63
I PI LL C +L +L KQ+HA +++ G+ + +S L+ + + I
Sbjct: 90 IIFQPIKHLLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIV 149
Query: 64 SSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
+ N L+ ++ S + A S+Y R+L+ K + P+ +T+PS+ KAC G
Sbjct: 150 AECSNSFDPLHWNMVISLYVKNCLFEDAISVYRRMLS-KGVIPDDYTYPSVLKAC---GE 205
Query: 124 WFQYGPPLHAH-VLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTL 182
Y + H ++ + FV +L+ Y ++G+L V+R LFD + D +WNT+
Sbjct: 206 LLDYDSGVAVHKAIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTM 265
Query: 183 LXXXXXXXXXXXXXXL----EDADLSLE-------------------ALYLFCDMQMSRR 219
+ L +A + AL LF M+ +
Sbjct: 266 ISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMR-AVI 324
Query: 220 RPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQ 279
+ + V +V ++ACS++GA+ G H + +R + V L+ MYS+C LN A
Sbjct: 325 QLDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYL 384
Query: 280 LFDQLTDRDTFCYNAMI 296
LF ++ ++ +NAM+
Sbjct: 385 LFRKIDEKGLITWNAML 401
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 106/228 (46%), Gaps = 19/228 (8%)
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+ ++NT I+ H+ A L++++ A +Q +S AC G + G
Sbjct: 294 IIIWNT-IAGGCLHTGNFKGALKLFSQMRA--VIQLDSVAMVVGLNACSHIGA-VKLGKE 349
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+H H ++ +D+ V+ +L+ Y++ L + LF +I E L TWN +L
Sbjct: 350 IHGHAVRTCFDVFDN-VKNTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSG----- 403
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
D S E +L +M PN VT+ +++ C+ + L G HCY++
Sbjct: 404 -------FAHMDRSEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMV 456
Query: 251 RNNLKLNRFV--GTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ + ++ +LV+MYS+ G + A ++FD L+ +D Y +MI
Sbjct: 457 KREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMI 504
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 125/271 (46%), Gaps = 26/271 (9%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSH 84
K++H + T + + L+T+ S+ +A +F I + +N ++S F
Sbjct: 348 KEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHM 407
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
++F L R + + ++PN T S+ C + Q+G H +++K E
Sbjct: 408 DRSEEVSFLL--REMLREGVEPNYVTIASILPLCARIAN-LQHGKEFHCYMVKREEQFKG 464
Query: 145 HFV-QASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
+ + SL+ Y++ G++ +R +FD +S D T+ +++ D +
Sbjct: 465 YLLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSG---------DGET 515
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG-- 261
AL LF +M+ +P+ VT+VA++ ACS+ G ++QG L R +++
Sbjct: 516 ---ALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVAQGQ----VLFRKMIEVYGIDPRV 568
Query: 262 ---TALVDMYSKCGCLNLACQLFDQLTDRDT 289
+ +VD++ + G L+ A ++ ++ + T
Sbjct: 569 EHYSCMVDLFGRAGLLDKAKEVITGMSCKPT 599
>Medtr3g052720.1 | organelle transcript processing protein, putative
| HC | chr3:20868148-20864227 | 20130731
Length = 1150
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 81/147 (55%), Gaps = 12/147 (8%)
Query: 150 SLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALY 209
S+++ Y G + ++ LFD + E D+ +W+ ++ EA+
Sbjct: 379 SMISGYLMCGYVEDAKKLFDSMVEKDVVSWSAMISGYAQHGCFS------------EAVA 426
Query: 210 LFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYS 269
LF +MQ+ RP+E +V++ISAC+++ AL G W H Y+ +N +N +GT LVDMY
Sbjct: 427 LFQEMQLLGIRPDETAIVSVISACTHMAALDLGKWIHAYISKNEFNVNVILGTTLVDMYM 486
Query: 270 KCGCLNLACQLFDQLTDRDTFCYNAMI 296
KCGC+ A ++F + ++ +NA+I
Sbjct: 487 KCGCVENALEVFYAMEEKGVSTWNALI 513
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 58/295 (19%)
Query: 6 PIFNHPILK-LLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSK---LASTYALT 61
P N IL+ L +C +N KQ+ +QM+ TG TY S L+ S+ + Y+L
Sbjct: 40 PTINLSILESKLHRCQWVNQFKQILSQMILTGYITDTYAASRLVNFSTHSNFIPFQYSLK 99
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS 121
IF+ + NP F++NT++ S + A + Y L T P+ +T+P L ++C
Sbjct: 100 IFNHLHNPNTFIWNTIMRSHLELHNSPQQALNFYKLFLFQNT-SPDHYTYPILLRSCTAR 158
Query: 122 GHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
+ G +H HV+KF D +V+ +L+N YA G + + +F + DL +WNT
Sbjct: 159 VSEPE-GKQIHDHVVKF-GFDSDVYVRNTLINLYAVCGNMVSAHKVFKESVVLDLVSWNT 216
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
LL A Y+ NLG + +
Sbjct: 217 LL-----------------------AGYV------------------------NLGDVVE 229
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
C + ++ N +++ ++ K GC+ A LFD++ +D ++AMI
Sbjct: 230 ---AECVYDKMPVR-NTIASNSMIVLFGKEGCIAKARSLFDRIEGKDMVSWSAMI 280
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 108/247 (43%), Gaps = 30/247 (12%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F S+ V ++ +IS + H A +L+ + ++P+ S+ AC
Sbjct: 393 AKKLFDSMVEKDVVSWSAMISGYAQHGC-FSEAVALFQE-MQLLGIRPDETAIVSVISAC 450
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCL--FDQISEPDL 176
G +HA++ K E + + +L++ Y K G CV L F + E +
Sbjct: 451 THMAA-LDLGKWIHAYISKN-EFNVNVILGTTLVDMYMKCG--CVENALEVFYAMEEKGV 506
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
+TWN L+ L L ++L +F DM+ ++ PNE+T + ++ AC ++
Sbjct: 507 STWNALILG------------LAMNGLVEKSLNVFADMKKTKTLPNEITFMGVLGACRHM 554
Query: 237 GALSQG-----VWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL-TDRDTF 290
G + +G T + + N+K +VD+ + G L A +L + + D
Sbjct: 555 GLVDEGRRYFSSMTQEHKIEPNVKHY----GCMVDLLGRAGLLKEAEELIESMPMAPDVA 610
Query: 291 CYNAMIG 297
+ A++G
Sbjct: 611 TWGALLG 617
>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:11375774-11372564 | 20130731
Length = 938
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 127/288 (44%), Gaps = 22/288 (7%)
Query: 15 LLQKCHSLNTLK---QVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
+L C ++ L+ Q H + GL + + S L+ + SK A I+S +P +
Sbjct: 450 ILSACGNIKVLEAGLQFHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMPEWS 509
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
V N LI+ + ++ + +IL L+P+ TF SL CC G
Sbjct: 510 VVSMNALIAGYAIKDTKEAINLLHEMQILG---LKPSEITFASLID-CCKESPKVILGMQ 565
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISE-PDLATWNTLLXXXXXX 189
+H +LK F+ SLL Y +L LF ++S + W L+
Sbjct: 566 IHCAILKNGLLCGSEFLGTSLLGMYMDSQKLAEGNILFSELSNLKSIVLWTALISGHTQN 625
Query: 190 XXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYL 249
D S +AL L+ +M+ + P++ T V ++ AC+ L +L G H +
Sbjct: 626 ------------DCSDQALNLYREMRDNNILPDQATFVTVLRACALLSSLQDGQEIHSLI 673
Query: 250 LRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL-TDRDTFCYNAMI 296
L+ +ALVDMY+KCG + A ++F++L +D +N+MI
Sbjct: 674 FHTGFDLDELTSSALVDMYAKCGDVKSAAKVFEELPIKKDVISWNSMI 721
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 124/272 (45%), Gaps = 19/272 (6%)
Query: 28 VHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPTVFLYNTLISSFTSHSS 86
VH + + G Y S L+ + K A +F + + V ++NT++ + +
Sbjct: 264 VHGEAVKLGFESSVYVASSLINMYGKCEMLCDAKKVFDVVCDRNVVMWNTILGVYAQNGC 323
Query: 87 QIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHF 146
+ L++ ++ P+ FT+ S+ +C + G LH+ ++K + D+
Sbjct: 324 -LSDVMELFSEMMGCGN-DPDEFTYSSILSSC-ACFDFLDIGRQLHSTIIK--KRFTDNL 378
Query: 147 -VQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSL 205
V +L++ YAK G L +R F+++ D +WN +L +
Sbjct: 379 CVNNALVDMYAKAGALKEARKQFERMKYRDNISWNAILVGYV------------QEEEET 426
Query: 206 EALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALV 265
EA +F M P+EV + +++SAC N+ L G+ H ++ L N F G++L+
Sbjct: 427 EAFNMFRRMNRHGVVPDEVCMASILSACGNIKVLEAGLQFHGLSVKLGLDTNLFAGSSLI 486
Query: 266 DMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
DMYSKCG + A +++ + + NA+I
Sbjct: 487 DMYSKCGGIEDARKIYSCMPEWSVVSMNALIA 518
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 125/266 (46%), Gaps = 27/266 (10%)
Query: 27 QVHAQMLTTGLALHTYCL-SHLLTI---SSKLASTYALTIFSSIPN-PTVFLYNTLISSF 81
Q+H +L GL + L + LL + S KLA L FS + N ++ L+ LIS
Sbjct: 565 QIHCAILKNGLLCGSEFLGTSLLGMYMDSQKLAEGNIL--FSELSNLKSIVLWTALISGH 622
Query: 82 TSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEP 141
T + A +LY R + + P+ TF ++ +AC Q G +H+ +
Sbjct: 623 TQNDCSDQ-ALNLY-REMRDNNILPDQATFVTVLRACALLSS-LQDGQEIHSLIFH-TGF 678
Query: 142 PYDHFVQASLLNFYAKYGRLCVSRCLFDQIS-EPDLATWNTLLXXXXXXXXXXXXXXLED 200
D ++L++ YAK G + + +F+++ + D+ +WN+++
Sbjct: 679 DLDELTSSALVDMYAKCGDVKSAAKVFEELPIKKDVISWNSMIVG------------FAK 726
Query: 201 ADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFV 260
+ AL +F +M +S P++VT + +++ACS+ G +S+G ++ N ++ V
Sbjct: 727 NGYAERALKVFDEMTLSSVSPDDVTFLGVLTACSHAGLVSEGRQIFDNMV-NYYSIHPRV 785
Query: 261 G--TALVDMYSKCGCLNLACQLFDQL 284
+VD+ +CG L A + D+L
Sbjct: 786 DHHACMVDLLGRCGFLEEAEEFIDKL 811
>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:31582853-31578503 | 20130731
Length = 1126
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 135/289 (46%), Gaps = 22/289 (7%)
Query: 15 LLQKCHSLNTLK---QVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSS--IPN 68
+L+ C + + ++H + G + + L+ + +K A +F S +
Sbjct: 154 VLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEK 213
Query: 69 PTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYG 128
+N++IS+ + A SL+ R + ++ N++TF S +AC G + + G
Sbjct: 214 DDPVSWNSIISAHVGEGESLE-ALSLFRR-MQEVGVESNTYTFVSALQACEGPT-FIKIG 270
Query: 129 PPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXX 188
+HA +LK D +V +L+ YA G++ + +F + D +WNTLL
Sbjct: 271 RGIHAVILKS-NHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSG--- 326
Query: 189 XXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCY 248
+ D+ +A+ F DMQ S ++P++V+++ +I+A L G+ H Y
Sbjct: 327 ---------MVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAY 377
Query: 249 LLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+++ + N +G +L+DMY KC C+ F+ + ++D + +I
Sbjct: 378 AIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIA 426
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 128/277 (46%), Gaps = 24/277 (8%)
Query: 26 KQVHAQMLTTGLALHTYCL-SHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTS 83
+Q+HA L T L + L + + + K S Y A+ +F + T+F +N +I + S
Sbjct: 66 QQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVS 125
Query: 84 HSSQIHLAFSLYN--RILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEP 141
+ A LY R+L + ++FTFP + KA CG+ + G +H +K
Sbjct: 126 AGRYVE-AIELYKEMRVLG---VSLDAFTFPCVLKA-CGAFKERRLGCEIHGVAVKCGYG 180
Query: 142 PYDHFVQASLLNFYAKYGRLCVSRCLFDQ--ISEPDLATWNTLLXXXXXXXXXXXXXXLE 199
+ FV +L+ YAK G L +R LFD + + D +WN+++
Sbjct: 181 GF-VFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGE-------- 231
Query: 200 DADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRF 259
SLEAL LF MQ N T V+ + AC + G H +L++N + +
Sbjct: 232 ----SLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVY 287
Query: 260 VGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
V AL+ MY+ CG + A ++F + +D +N ++
Sbjct: 288 VSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLL 324
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 126/276 (45%), Gaps = 29/276 (10%)
Query: 33 LTTGLALHTYCLSHLLTISSKLAST------------YALTIFSSIPNPTVFLYNTLISS 80
L G+ +H Y + H + + + ++ Y + F +P + + T+I+
Sbjct: 368 LLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAG 427
Query: 81 FTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLE 140
+ + + A +L ++ K + + S+ AC G + +H +VLK
Sbjct: 428 YAQNECHLD-ALNLLRKVQLEK-MDVDPMMIGSILLACSGLKSE-KLIKEIHGYVLK--G 482
Query: 141 PPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLED 200
D +Q +++N Y + + +R +F+ I+ D+ +W +++
Sbjct: 483 GLADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHN----------- 531
Query: 201 ADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFV 260
L++EAL LF + + P+ +TLV+++ A + L +L +G H +L+R L +
Sbjct: 532 -GLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLI 590
Query: 261 GTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+LVDMY++CG + A +F+ + RD + +MI
Sbjct: 591 ANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMI 626
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 74/180 (41%), Gaps = 14/180 (7%)
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
C S G LHAH LK F+ ++ Y K G + +FD++SE + T
Sbjct: 56 CASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFT 115
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
WN ++ A +EA+ L+ +M++ + T ++ AC
Sbjct: 116 WNAMIGACVS------------AGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKE 163
Query: 239 LSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQ--LTDRDTFCYNAMI 296
G H ++ FV AL+ MY+KCG L A LFD + D +N++I
Sbjct: 164 RRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSII 223
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 219 RRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNR-FVGTALVDMYSKCGCLNLA 277
R P + + C++ AL QG H + L+ L+ F+ T V MY KCG A
Sbjct: 42 RFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDA 101
Query: 278 CQLFDQLTDRDTFCYNAMIG 297
++FD++++R F +NAMIG
Sbjct: 102 VKVFDKMSERTIFTWNAMIG 121
>Medtr5g022740.1 | PPR containing plant-like protein | HC |
chr5:8999294-8995144 | 20130731
Length = 665
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 134/303 (44%), Gaps = 33/303 (10%)
Query: 19 CHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNP-TVFLYNT 76
C + + L Q+ + ++T+ + + LL+ +S L + + IF NP F NT
Sbjct: 48 CQTTHHLLQIQSLLITSSFYRNPFLSRTLLSRASNLCTVDFTFLIFHHFNNPLDTFCVNT 107
Query: 77 LISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVL 136
+I+S+ +S H A Y L NS+TF SL AC G H +
Sbjct: 108 VINSYC-NSYVPHKAIVFYFSSLKIGFF-ANSYTFVSLISAC-SKMSCVDNGKMCHGQAV 164
Query: 137 K----FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXX 192
K F+ P V+ SL + Y G + V+R +FD + DL +WN+++
Sbjct: 165 KNGVDFVLP-----VENSLAHMYGSCGYVEVARVMFDGMVSRDLVSWNSMIDGYVKVGDL 219
Query: 193 XXXXXLEDADLSLE-------------------ALYLFCDMQMSRRRPNEVTLVALISAC 233
L D AL LF +M R R N T+V ++AC
Sbjct: 220 SAAHKLFDVMPERNLVTWNCLISGYSKGRNPGYALKLFREMGRLRIRENARTMVCAVTAC 279
Query: 234 SNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYN 293
G L +G H ++R ++ + + TAL+DMY KCG + A ++F++++ R+ +N
Sbjct: 280 GRSGRLKEGKSVHGSMIRLFMRSSLILDTALIDMYCKCGRVEAASKVFERMSSRNLVSWN 339
Query: 294 AMI 296
AMI
Sbjct: 340 AMI 342
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 85/193 (44%), Gaps = 14/193 (7%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F +P + +N LIS + S A L+ R + ++ N+ T AC
Sbjct: 222 AHKLFDVMPERNLVTWNCLISGY-SKGRNPGYALKLF-REMGRLRIRENARTMVCAVTAC 279
Query: 119 CGSGHWFQYGPPLHAHVLK-FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLA 177
SG + G +H +++ F+ + +L++ Y K GR+ + +F+++S +L
Sbjct: 280 GRSGR-LKEGKSVHGSMIRLFMRSSL--ILDTALIDMYCKCGRVEAASKVFERMSSRNLV 336
Query: 178 TWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMS--------RRRPNEVTLVAL 229
+WN ++ L D + +E + ++ S R P+E+T + +
Sbjct: 337 SWNAMILGHCIHGNPEDGLSLFDLMVGMERVKGEVEVDESSSADRGLVRLLPDEITFIGI 396
Query: 230 ISACSNLGALSQG 242
+ AC+ LS+G
Sbjct: 397 LCACARAELLSEG 409
>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:40854327-40856914 | 20130731
Length = 616
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 133/310 (42%), Gaps = 37/310 (11%)
Query: 12 ILKLLQKCHS---LNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIP 67
I +LL+ C S L +K +HA+ + G + + + ++ +K A +F +P
Sbjct: 54 IPQLLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMP 113
Query: 68 NPTVFLYNTLISSFTSHS--------------------SQIHLAFSLYNRIL-AHKTLQP 106
V +N +I + + SQ+ F+ L A K
Sbjct: 114 ERNVVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFDK 173
Query: 107 NSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRC 166
+ + + + G A + L P ++FV +S++ Y K G + +
Sbjct: 174 VPYELKDVVIWTVMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEA 233
Query: 167 LFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTL 226
+F +I +L WN+++ +AL F +M + P+E T+
Sbjct: 234 IFRRIPVRNLEIWNSMIAGYVQN------------GCGEKALEAFGEMGVDGFEPDEFTV 281
Query: 227 VALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTD 286
V+++SAC+ LG L G H + + +N+FV + L+DMY+KCG L A +F+ +
Sbjct: 282 VSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNE 341
Query: 287 RDTFCYNAMI 296
R+ FC+NAMI
Sbjct: 342 RNVFCWNAMI 351
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 106/241 (43%), Gaps = 19/241 (7%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A IF IP + ++N++I+ + + A + + +P+ FT S+ AC
Sbjct: 231 AEAIFRRIPVRNLEIWNSMIAGYVQNGCG-EKALEAFGE-MGVDGFEPDEFTVVSVLSAC 288
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
G G +H H+++ + FV + L++ YAK G L +R +F+ +E ++
Sbjct: 289 AQLGD-LDAGKQMH-HMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFC 346
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
WN ++ E L MQ S R + VT + ++SAC++ G
Sbjct: 347 WNAMIAGFAVNGQCN------------EVLEYLDRMQESNIRLDAVTFITVLSACAHGGL 394
Query: 239 LSQGVWTHCYLLRNNLKLN-RFVGTALVDMYSKCGCLNLACQLFDQLTDR-DTFCYNAMI 296
+S+ + + +++ R G +VD+ + G L A +L ++ + + AMI
Sbjct: 395 MSEALEVISKMEEYGIEMGIRHYG-CMVDLLGRAGKLKEAYELIKRMPMKPNETVLGAMI 453
Query: 297 G 297
G
Sbjct: 454 G 454
>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2861060-2858958 | 20130731
Length = 700
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 127/276 (46%), Gaps = 22/276 (7%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSK-LASTYALTIFSS----IPNPT-VFLYNTLISS 80
Q H + GL H + S L+ + SK AL + S I N F YN+++++
Sbjct: 142 QCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNA 201
Query: 81 FTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLE 140
S ++ A + R++ + +S T+ S+ CG G +HA +LK
Sbjct: 202 LVE-SGRLGEAVEVLGRMVDEGVVW-DSVTYVSVM-GLCGQIRDLGLGLQVHAQLLKG-G 257
Query: 141 PPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLED 200
+D FV + L++ + K G + +R +FD + ++ W +L+ L++
Sbjct: 258 LTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAY-----------LQN 306
Query: 201 ADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFV 260
+ E L L M NE T L++A + + AL G H + + +K V
Sbjct: 307 GEFE-ETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIV 365
Query: 261 GTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G AL++MYSKCGC++ + +F + +RD +NAMI
Sbjct: 366 GNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMI 401
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 130/286 (45%), Gaps = 22/286 (7%)
Query: 21 SLNTLKQVHAQMLTTGLAL--HTYCLSHLLTISSKLASTY--------ALTIFSSIPNPT 70
+LN K +H Q+L + H+Y +++ ++S L + Y A +F + +
Sbjct: 27 NLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNS-LINLYVKCSKLRLARYLFDEMSLRS 85
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
V YN L+ + HS + HL + + QPN + F ++ AC SG F+ G
Sbjct: 86 VVSYNVLMGGYL-HSGE-HLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFE-GMQ 142
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
H + KF + HFV++SL++ Y+K C L Q+ E + +
Sbjct: 143 CHGFLFKF-GLVFHHFVKSSLVHMYSK----CFHVDLALQVLESEHGNIDN--DNDAFCY 195
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
+E L EA+ + M + VT V+++ C + L G+ H LL
Sbjct: 196 NSVLNALVESGRLG-EAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLL 254
Query: 251 RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ L + FVG+ LVDM+ KCG + A ++FD L +R+ + +++
Sbjct: 255 KGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLM 300
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 17/235 (7%)
Query: 11 PILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNP 69
++ L + L QVHAQ+L GL + S L+ + K A +F + N
Sbjct: 232 SVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNR 291
Query: 70 TVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGP 129
V ++ +L++++ + + +L + + T+ N FTF L A G ++G
Sbjct: 292 NVVVWTSLMTAYL-QNGEFEETLNLLSCMDREGTM-SNEFTFAVLLNAFAGMAA-LRHGD 348
Query: 130 PLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXX 189
LHA V K L V +L+N Y+K G + S +F + D+ TWN ++
Sbjct: 349 LLHARVEK-LGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGY--- 404
Query: 190 XXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVW 244
L +AL LF DM + PN VT V ++SAC++L +++G +
Sbjct: 405 ---------SQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFY 450
>Medtr2g009760.1 | PPR containing plant-like protein | HC |
chr2:2078277-2080236 | 20130731
Length = 622
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 134/282 (47%), Gaps = 33/282 (11%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY--------ALTIFSSIPNPTVFLYNTL 77
+Q+H ++ G + H + +S+ Y A ++F + + +
Sbjct: 189 RQIHGLVVVDGRIR----IQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAV 244
Query: 78 ISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLK 137
IS +++ +A + Y R + + + PN T +L AC G + +YG +H + +
Sbjct: 245 ISG-CANNQDYDVALACY-REMQVEGVSPNRVTLIALLAACARPG-FVKYGKEIHGYAFR 301
Query: 138 FLEPPYD--HFVQASLLNFYAKYGR-LCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXX 194
+D H +L+ Y + G+ L ++ +F+ S D+ W++++
Sbjct: 302 ---RGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGE--- 355
Query: 195 XXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNL 254
S +AL LF M+ PN VTL+A+ISAC+NL + G H Y+L+ +
Sbjct: 356 ---------SDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGI 406
Query: 255 KLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ FV AL++MY+KCG L+ + ++F ++ RD+ +N+MI
Sbjct: 407 GFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMI 448
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 36/249 (14%)
Query: 68 NPTVFLYNTLISSFT-SHSSQIHLAFSLYNRILAHKTLQP-----------NS--FTFPS 113
N F+ +SS +HS H+ +L + L H+TLQ NS F PS
Sbjct: 13 NCISFITRRFLSSVVPTHSPSDHIK-TLVSMGLYHQTLQFFTQLHFSAHHFNSIPFVLPS 71
Query: 114 LFKACCGSGHWFQYGPPLHAHVLKFLEPPY-DHFVQASLLNFYAKYGRLCVSRCLFDQIS 172
+ KAC + H+ +G LH L F+ Y D V S+++ YAK+ + +R +FD +
Sbjct: 72 VIKACSFT-HFHAFGTQLHC--LAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMP 128
Query: 173 EPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISA 232
D TWN+++ L++ L +EAL + D P L +++S
Sbjct: 129 HRDTITWNSMI-----------NAYLQNG-LLVEALQMLKDFYFLGFLPKPELLASMVSM 176
Query: 233 CSNLGALSQGVWTHCYLL-----RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDR 287
C L + + L R ++ + F+ TA VD Y +CG +A +FD++ +
Sbjct: 177 CGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVK 236
Query: 288 DTFCYNAMI 296
+ + A+I
Sbjct: 237 NEVSWTAVI 245
>Medtr7g103230.1 | PPR containing plant-like protein | HC |
chr7:41735375-41738881 | 20130731
Length = 970
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 141/295 (47%), Gaps = 21/295 (7%)
Query: 5 NPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFS 64
+P F P L+ + N K +HA +L +H + + T + +YA +F
Sbjct: 64 HPSFLFPFLRFSSHNKNPNLAKSIHATLLKNH-EIHHLTTALISTYINLRLFSYAHRLFL 122
Query: 65 SIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHW 124
S P + Y+ LIS+F+ + + F L+ ++ +L+PN +T+ ++ AC +
Sbjct: 123 SQSPPNIVSYSALISAFSKSNREKQSLF-LFLHMITVSSLRPNHYTYVAVLTACTRILN- 180
Query: 125 FQYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTL 182
Q+G LHA V+K +L+ FV +L+ FY+K G + +FD++ E D+A+WNT+
Sbjct: 181 LQFGLQLHAAVIKTGYLKSV---FVSNALMLFYSKCGFYKNAFKVFDEMPERDIASWNTV 237
Query: 183 LXXXXXXXXXXXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACSNLGALSQ 241
+ + LFCDM + + + TL ++AC+ G L +
Sbjct: 238 MSCAVQEFMYD------------DVFRLFCDMLVIDGLKVDYFTLSTFLTACAASGLLME 285
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G H + ++ L+ VG AL+ Y+ G ++ LF++++ RD + M+
Sbjct: 286 GKQVHAHAVKVGLEDELNVGNALIGFYTNFGDIDDVVCLFERMSVRDVITWTEMV 340
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 102/238 (42%), Gaps = 15/238 (6%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
L IF +P YN L+S ++ + A L+ R++ + ++ F+ S AC
Sbjct: 352 GLKIFDEMPEKNCVTYNVLLSGLCRNAEGLK-AVELFIRMV-EEGVELTDFSLSSGINAC 409
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
++ +H +KF + FV+ +LL+ Y + GR+ + +++++ E
Sbjct: 410 SLLAD-YRVSRQMHGFAIKF-GFGSNVFVEGALLDMYTRCGRMVDAEKMWEELEEVSSVV 467
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
W +++ L S L + +EV L +++S C +G
Sbjct: 468 WTSMMCGYARNGQPREAFSLFHLGHSEWKLIM-----------DEVALTSMLSLCGTVGY 516
Query: 239 LSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G HC +L+ N VG +V+MY KCG ++ A ++F + D +N +I
Sbjct: 517 HDMGKQIHCQVLKFGFHSNVQVGNVVVEMYFKCGNVDDAIKMFSGMASTDIVSWNTLI 574
>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:38310385-38313323 | 20130731
Length = 684
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 19/276 (6%)
Query: 24 TLKQVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFSSIPNPTVFLYNTLISSFT 82
T KQ+H L G+ + + K A +F +P + +N IS+
Sbjct: 126 TGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAV 185
Query: 83 SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPP 142
+ + + H +PNS TF + AC G LHA +++
Sbjct: 186 QDRRSLDAIVAFKEFLCVHG--EPNSITFCAFLNACVDMVR-LNLGRQLHAFIVR-CGYK 241
Query: 143 YDHFVQASLLNFYAKYGRLCVSRCLFDQIS-EPDLATWNTLLXXXXXXXXXXXXXXLEDA 201
D V L++FY K G + + +F++I ++ +W ++L L
Sbjct: 242 EDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAA------------LVQN 289
Query: 202 DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG 261
A +F + P + + +++SAC+ LG L G H ++ ++ N FVG
Sbjct: 290 HEEERACMVFLQAR-KEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVG 348
Query: 262 TALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+ALVDMY KCG + A Q+F +L +R+ +NAMIG
Sbjct: 349 SALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIG 384
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 123/267 (46%), Gaps = 24/267 (8%)
Query: 26 KQVHAQMLTTGLA-LHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTS 83
+ +HA ++ T + L ++ +HL+ + SKL A + S TV + +LIS
Sbjct: 26 RTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVH 85
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY---GPPLHAHVLKFLE 140
+ + N + +QPN FTFP +FKA + Q G +H LK
Sbjct: 86 NRRFLPALLHFTN--MRRDNVQPNDFTFPCVFKASA----FVQIPMTGKQIHGLALKG-G 138
Query: 141 PPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLED 200
YD FV S + Y K G + +FD++ + +LATWN + ++D
Sbjct: 139 MIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNA-----------VQD 187
Query: 201 ADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFV 260
SL+A+ F + PN +T A ++AC ++ L+ G H +++R K + V
Sbjct: 188 RR-SLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSV 246
Query: 261 GTALVDMYSKCGCLNLACQLFDQLTDR 287
L+D Y KCG + A +F+++ +R
Sbjct: 247 ANGLIDFYGKCGDIVSAEMVFNRIGNR 273
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 22 LNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPN-PTVFLYNTLIS 79
LN +Q+HA ++ G + L+ K A +F+ I N V + ++++
Sbjct: 225 LNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLA 284
Query: 80 SFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFL 139
+ + + + A K ++P F S+ AC G + G +HA +K
Sbjct: 285 ALVQNHEEERACMVF---LQARKEVEPTDFMISSVLSACAELGG-LELGRSVHALAVKAC 340
Query: 140 EPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLE 199
+ FV ++L++ Y K G + + +F ++ E +L TWN ++
Sbjct: 341 VED-NIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQG--------- 390
Query: 200 DADLSLEALYLFCDMQMSRR--RPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLN 257
D D+ AL LF +M + RP+ VTL++++S CS +GA+ +G+ + +++LN
Sbjct: 391 DIDM---ALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQ-----IFESMRLN 442
Query: 258 RFVGTA------LVDMYSKCGCLNLACQLFDQLTDRDTF-CYNAMIG 297
+ +VD+ + G ++ A + + + T + A++G
Sbjct: 443 YGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLG 489
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 12/169 (7%)
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G +HAH+++ P F+ L+N Y+K L ++ + + TW +L+
Sbjct: 25 GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCV 84
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
L AL F +M+ +PN+ T + A + + G H
Sbjct: 85 HNRRF------------LPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHG 132
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L+ + + FVG + DMY K G AC +FD++ R+ +NA I
Sbjct: 133 LALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYI 181
>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:32525227-32527614 | 20130731
Length = 795
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 107/264 (40%), Gaps = 27/264 (10%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A + + P +N +IS + AF + R+ + +Q + +T+ SL AC
Sbjct: 236 ARELLDGLTYPIDVAWNAMISGYVRRG-LYEEAFDTFRRMHS-MGIQEDEYTYTSLISAC 293
Query: 119 CGSGH---WFQYGPPLHAHVLKFLEPPYDHFV---QASLLNFYAKYGRLCVSRCLFDQIS 172
F G +H ++L+ + P HFV +L+ FY KY R+ +R +FD++
Sbjct: 294 GSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMP 353
Query: 173 EPDLATWNTLLXXXXXXXXXXXX-------------------XXLEDADLSLEALYLFCD 213
D+ +WN +L L E L LF
Sbjct: 354 VRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQ 413
Query: 214 MQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGC 273
M+ P + I+ACS LG+L G H ++R G AL+ MYS+CG
Sbjct: 414 MKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGV 473
Query: 274 LNLACQLFDQLTDRDTFCYNAMIG 297
+ A +F + D+ +NAMI
Sbjct: 474 VESAESVFLTMPYVDSVSWNAMIA 497
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 133/353 (37%), Gaps = 95/353 (26%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFT-- 82
+ VHA +LT+G +T+ L+ L+ I K ++ TYA +F IP P + TL+S+++
Sbjct: 25 RAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSS 84
Query: 83 ------------------------------SHSSQIHLAFSLYNRILAHKTLQPNSFTFP 112
SH + H A +L+ ++ + L P+ FTF
Sbjct: 85 GNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFL-PDPFTFS 143
Query: 113 SLFKA--------------------------------------CCGSGHWFQYGPPLHAH 134
S+ A CC S + + +
Sbjct: 144 SVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASA 203
Query: 135 VLKFLEPPYDHFVQASLLNFYAKYGR---LCVSRCLFDQISEPDLATWNTLLXXXXXXXX 191
F E P + + S A Y R L +R L D ++ P WN ++
Sbjct: 204 RKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRR-- 261
Query: 192 XXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSN----LGALSQGVWTHC 247
L EA F M + +E T +LISAC + +G + G H
Sbjct: 262 ----------GLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHG 311
Query: 248 YLLRNNLKLNRF----VGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
Y+LR ++ + V AL+ Y+K + A ++FD++ RD +NA++
Sbjct: 312 YILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVL 364
>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:46542320-46539266 | 20130731
Length = 1017
Score = 92.0 bits (227), Expect = 6e-19, Method: Composition-based stats.
Identities = 72/293 (24%), Positives = 139/293 (47%), Gaps = 20/293 (6%)
Query: 9 NHPILKLLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFS 64
N ++ L C SL L +Q+H + GL L + LLT+ ++ S +F
Sbjct: 440 NFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFF 499
Query: 65 SIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHW 124
+P +N+ I + + + + A + ++ +PN TF ++ A S
Sbjct: 500 QMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMM-QAGWRPNRVTFINIL-AAVSSFSV 557
Query: 125 FQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEP-DLATWNTLL 183
G +HA +LK+ D+ ++ +LL FY K ++ +F ++SE D +WN+++
Sbjct: 558 LGLGHQIHALILKY-SVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMI 616
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
+ + +A+ L M ++ + T ++SAC+++ L +G+
Sbjct: 617 SGYLH------------SGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGM 664
Query: 244 WTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H +R L+ + VG+ALVDMY+KCG ++ A + F+ + R+ + +N+MI
Sbjct: 665 EVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMI 717
Score = 75.9 bits (185), Expect = 4e-14, Method: Composition-based stats.
Identities = 77/301 (25%), Positives = 133/301 (44%), Gaps = 43/301 (14%)
Query: 21 SLNTLKQVHAQMLTTGLALHTY-----CLSHLLTISSKLASTY---------ALTIFSSI 66
+L +Q + + G+ +H + C+S ++ +S+ L S Y A +F I
Sbjct: 130 ALRACQQCGSTGIKLGMQIHAFICKLPCVSDMI-LSNVLMSMYSDCSGSIDDAHRVFDEI 188
Query: 67 PNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKT---LQPNSFTFPSLFKACCGSGH 123
+N++IS + + AF L++ + L+PN +T SL A C
Sbjct: 189 KFRNSVTWNSIISVYCRRGDAVS-AFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLA- 246
Query: 124 WFQYGPPLHAHVLKFLEPP---YDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWN 180
G L +L +E D +V ++L+N +A+YG + ++ +F Q+ + + T N
Sbjct: 247 --DCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMN 304
Query: 181 TLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALS 240
L+ L EA +F +M+ N +LV L+S + L
Sbjct: 305 GLMVG------------LARQHQGEEAAKVFKEMK-DLVEINSESLVVLLSTFTEFSNLK 351
Query: 241 QGVW----THCYLLRNNLKLNRF-VGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAM 295
+G H YL R+ L R +G ALV+MY KC ++ AC +F + +DT +N+M
Sbjct: 352 EGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSM 411
Query: 296 I 296
I
Sbjct: 412 I 412
Score = 54.7 bits (130), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 15/156 (9%)
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
D F +L+N Y + G L +R LFD++ + +L +W+ L+ +
Sbjct: 57 DVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNR------------M 104
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA--LSQGVWTHCYLLRNNLKLNRFVG 261
EA LF + S PN + + + AC G+ + G+ H ++ + + +
Sbjct: 105 PDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILS 164
Query: 262 TALVDMYSKC-GCLNLACQLFDQLTDRDTFCYNAMI 296
L+ MYS C G ++ A ++FD++ R++ +N++I
Sbjct: 165 NVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSII 200
Score = 52.0 bits (123), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 72/148 (48%), Gaps = 12/148 (8%)
Query: 150 SLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALY 209
+L+N Y K + + +F + D +WN+++ L+ + EA+
Sbjct: 379 ALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISG------------LDHNERFEEAVS 426
Query: 210 LFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYS 269
F M+ + P+ ++++ +S+CS+LG L+ G H + L L+ V AL+ +Y+
Sbjct: 427 CFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYA 486
Query: 270 KCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+ +N ++F Q+ + D +N+ IG
Sbjct: 487 ETDSINECQKVFFQMPEYDQVSWNSFIG 514
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 137/291 (47%), Gaps = 39/291 (13%)
Query: 16 LQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALT--------IFSSIP 67
L KC + N +KQ+HAQ++ L Y I+ KL ++Y+LT +F+ +P
Sbjct: 29 LHKCTNPNHIKQIHAQLIKCHLHQDPY-------IAPKLIASYSLTNNLSSAVNVFNQVP 81
Query: 68 NPTVFLYNTLISSFT--SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWF 125
+P V LYN LI +++ + S AF + ++ L N FT+P L K C GS W
Sbjct: 82 DPNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADN-FTYPFLLKGCNGSSSWL 140
Query: 126 QYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXX 185
+HAHV K L +D FV SL++ Y + G + ++ +F + E D+ +WN+++
Sbjct: 141 SLVKMVHAHVEK-LGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMV-- 197
Query: 186 XXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWT 245
+++ DL AL +F +M R V+ ++ + G + +
Sbjct: 198 ---------GGLVKNGDLD-GALKVFDEMPERDR----VSWNTMLDGFTKAGEMDKAF-- 241
Query: 246 HCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L + + + +V YSK G +++A LFD+ ++ + +I
Sbjct: 242 --KLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTII 290
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 130/295 (44%), Gaps = 32/295 (10%)
Query: 8 FNHPILKLLQKCHS----LNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTI 62
F +P L L+ C+ L+ +K VHA + G + + L+ + A+ +
Sbjct: 124 FTYPFL--LKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKV 181
Query: 63 FSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSG 122
FS + V +N+++ + + A +++ + + N+ KA
Sbjct: 182 FSGMEERDVVSWNSMVGGLVKNG-DLDGALKVFDEMPERDRVSWNTM-LDGFTKA----- 234
Query: 123 HWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTL 182
G A L D ++++ Y+K G + ++R LFD+ +L W T+
Sbjct: 235 -----GEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTI 289
Query: 183 LXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG 242
+ E + EA+ L +M+ S R ++ +++++AC+ G L G
Sbjct: 290 ISGYA-----------EKGQVK-EAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLG 337
Query: 243 VWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL-TDRDTFCYNAMI 296
H LR+ + + V + +DMY+KCGC++ A ++F+ + T++D +N+MI
Sbjct: 338 KKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMI 392
>Medtr7g005870.1 | PPR containing plant-like protein | HC |
chr7:378521-375734 | 20130731
Length = 601
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 130/306 (42%), Gaps = 83/306 (27%)
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPL 131
FL NT+I++ S Q + F+LYN+ +P+S+TF + K C S Q G +
Sbjct: 88 FLCNTIINAHFS-LRQFNHGFTLYNQFSKDCFFRPSSYTFTLILKGCSVSDAKRQ-GFQI 145
Query: 132 HAHVLK------------------------FLEPPYDHFVQASLLNF------YAKYGRL 161
H VLK F +D SL+++ YA+ G +
Sbjct: 146 HGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKVFDEMSVRSLVSWTAVIVGYARCGDM 205
Query: 162 CVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXL--------------------EDA 201
+R LFD + + D+A +N ++ L ED
Sbjct: 206 VEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDLARDLFDKMRVKNVISWTSMVHGYSEDG 265
Query: 202 DL------------------------------SLEALYLFCDMQMSRR-RPNEVTLVALI 230
D+ S +AL LFC+M+ + NEVT+V+++
Sbjct: 266 DVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVL 325
Query: 231 SACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTF 290
A ++L AL G W H ++ RN L + V ALVDMY+KCG + A +F+++T++DT
Sbjct: 326 PAVADLSALDLGGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKAKLVFEEMTEKDTG 385
Query: 291 CYNAMI 296
+NA+I
Sbjct: 386 SWNALI 391
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F +P V +N +I + + + H A L+ + + ++ N T S+ A
Sbjct: 270 ARFLFDCMPEKNVLSWNAMIRGYC-QNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAV 328
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
G +H V + H A L++ YAK G + ++ +F++++E D +
Sbjct: 329 ADLSA-LDLGGWVHGFVQRNQLDGSVHVCNA-LVDMYAKCGEIGKAKLVFEEMTEKDTGS 386
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
WN L+ + EAL +F M PN++T+ +++SAC++ G
Sbjct: 387 WNALINGYGVNG------------CAKEALEVFAMMLREGFEPNQITMTSVLSACNHCGL 434
Query: 239 LSQG 242
+ +G
Sbjct: 435 VEEG 438
>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:33294066-33291364 | 20130731
Length = 814
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 136/276 (49%), Gaps = 28/276 (10%)
Query: 28 VHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSHSS 86
VH +L G+ + L+ L+ + + T A +F+ + + ++ +N +IS +
Sbjct: 261 VHVFVLALGMGDDVFVLTSLVDMYCNVGDTESAFLVFNRMCSRSLISWNAMISGCV-QNG 319
Query: 87 QIHLAFSLYNRILAHKTLQP----NSFTFPSLFKACCGSGHWFQYGPPLHAHVL-KFLEP 141
+ +FSL+ HK +Q +S T SL + C + + G LHA ++ K LE
Sbjct: 320 MVPESFSLF-----HKLVQSGDGFDSGTLVSLIRGCSQTSD-LENGKVLHACIIRKGLES 373
Query: 142 PYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDA 201
+ + ++++ Y+K G + + +F + + ++ TW +L L
Sbjct: 374 --NLVLSTAIVDMYSKCGAIKQASDVFRTMEKRNVITWTAMLVG------------LSQN 419
Query: 202 DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG 261
+ AL LFC MQ N VTLV+L+ C++LG+L +G H +L+R+ + N
Sbjct: 420 GYAEGALKLFCRMQEENVAANSVTLVSLVHCCAHLGSLKKGRSVHGHLIRHGYEFNAVNM 479
Query: 262 TALVDMYSKCGCLNLACQLF-DQLTDRDTFCYNAMI 296
+AL+DMY+KCG ++ A +LF + +D N+MI
Sbjct: 480 SALIDMYAKCGKIHSAEKLFYNGFHLKDVILCNSMI 515
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 132/298 (44%), Gaps = 27/298 (9%)
Query: 7 IFNHP---ILKLLQK-CHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALT 61
+FN P LL++ ++L +K +HAQ++ + + + L+ I S L YA
Sbjct: 34 LFNQPSSIFSSLLREFSNTLIDVKSIHAQIIRNYASNQHFLATKLIKIYSNLGFLNYAYK 93
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS 121
+F P+ L N ++ F + + L+ +++ + ++ NS+T KAC
Sbjct: 94 VFDQCPHRETILCNAMMGGFLKNMEYKEVP-KLF-KMMGLRDIELNSYTCVFGLKACT-- 149
Query: 122 GHWFQYGPPLHAHVLKFLEPPYDHF---VQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
+ +++ H V +S++NF K G L +R +FD + E D+
Sbjct: 150 ---VLLDDEVGMELVRMAVRKGFHLHPHVGSSMINFLVKCGNLNDARMVFDGMPERDVVC 206
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
WN+++ L E + LF +M RP+ VT+ +++ AC G
Sbjct: 207 WNSIIGGYV------------QEGLLKEVIQLFVEMISCGIRPSSVTMASILKACGESGH 254
Query: 239 LSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G H ++L + + FV T+LVDMY G A +F+++ R +NAMI
Sbjct: 255 KKLGTCVHVFVLALGMGDDVFVLTSLVDMYCNVGDTESAFLVFNRMCSRSLISWNAMI 312
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 123/279 (44%), Gaps = 22/279 (7%)
Query: 12 ILKLLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIP 67
++ L++ C + L K +HA ++ GL + + ++ + SK + A +F ++
Sbjct: 343 LVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTAIVDMYSKCGAIKQASDVFRTME 402
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
V + ++ S + A L+ R + + + NS T SL CC +
Sbjct: 403 KRNVITWTAMLVGL-SQNGYAEGALKLFCR-MQEENVAANSVTLVSLVH-CCAHLGSLKK 459
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLF-DQISEPDLATWNTLLXXX 186
G +H H+++ ++ ++L++ YAK G++ + LF + D+ N+++
Sbjct: 460 GRSVHGHLIRH-GYEFNAVNMSALIDMYAKCGKIHSAEKLFYNGFHLKDVILCNSMIMGY 518
Query: 187 XXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG-VWT 245
+AL ++ M R +PN+ T V++++ACS+ G + +G
Sbjct: 519 GMHGQGH------------QALRVYDRMIDERLKPNQTTFVSMLTACSHSGLVEEGRTLF 566
Query: 246 HCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
HC +N+K + VD+ S+ G L A L Q+
Sbjct: 567 HCMERVHNIKPSDKHYACFVDLLSRAGYLEEAYALVKQI 605
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 13/169 (7%)
Query: 129 PPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXX 188
+HA +++ HF+ L+ Y+ G L + +FDQ + N ++
Sbjct: 57 KSIHAQIIRNY-ASNQHFLATKLIKIYSNLGFLNYAYKVFDQCPHRETILCNAMMGGF-- 113
Query: 189 XXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCY 248
L++ + E LF M + N T V + AC+ L G+
Sbjct: 114 ---------LKNMEYK-EVPKLFKMMGLRDIELNSYTCVFGLKACTVLLDDEVGMELVRM 163
Query: 249 LLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+R L+ VG+++++ KCG LN A +FD + +RD C+N++IG
Sbjct: 164 AVRKGFHLHPHVGSSMINFLVKCGNLNDARMVFDGMPERDVVCWNSIIG 212
>Medtr4g015760.2 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 673
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 137/275 (49%), Gaps = 21/275 (7%)
Query: 26 KQVHAQMLTTGLALHTYCLSH-LLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTS 83
+ VH + GL + CL++ LL + K S A +F + + + ++T+++ +
Sbjct: 199 RSVHGFVKRKGLD-NKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYAD 257
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC-CGSGHWFQYGPPLHAHVLKFLEPP 142
+ ++ + L+N +L K ++PN T S+ +AC C S + G +H + +
Sbjct: 258 NGAETDV-LDLFNEML-DKRIKPNWVTVVSVLRACACISN--LEEGMKIHELAVNY-GFE 312
Query: 143 YDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDAD 202
+ V +L++ Y K + LF+++ + D+ W L D
Sbjct: 313 METTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYA------------DNG 360
Query: 203 LSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGT 262
+ E++++F +M S RP+ + LV +++ S LG L Q V H ++++N + N+F+G
Sbjct: 361 MVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGA 420
Query: 263 ALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+L+++Y+KC + A ++F +T +D ++++I
Sbjct: 421 SLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIA 455
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 115/245 (46%), Gaps = 20/245 (8%)
Query: 58 YALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTL----QPNSFTFPS 113
+A +F P+ TV+L+N L+ S+ + SL+ ++ ++ +P++++
Sbjct: 24 HAHKLFQETPHRTVYLWNALLRSYCFEGEWVE-TLSLFRQMNNVSSVSIEERPDNYSVSI 82
Query: 114 LFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISE 173
K+C G G +H LK + D FV ++L++ Y K G++ + +F + +
Sbjct: 83 ALKSCAGLRKLL-LGKVIHG-FLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPK 140
Query: 174 PDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR-RPNEVTLVALISA 232
PD+ W +++ E + AL F M +S + P+ VTLV++ SA
Sbjct: 141 PDVVLWTSIISGY------------EQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASA 188
Query: 233 CSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCY 292
C+ L G H ++ R L + +L+ +Y K G + A LF +++D+D +
Sbjct: 189 CAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISW 248
Query: 293 NAMIG 297
+ M+
Sbjct: 249 STMVA 253
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 128/281 (45%), Gaps = 26/281 (9%)
Query: 12 ILKLLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSK-LASTYALTIFSSIP 67
++ +L+ C ++ L++ +H + G + T + L+ + K + A+ +F+ +P
Sbjct: 283 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 342
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
V + L S + + +H + ++ +L+ T +P++ + G Q
Sbjct: 343 KKDVIAWAVLFSGYADNG-MVHESMWVFRNMLSSGT-RPDAIALVKILTTISELG-ILQQ 399
Query: 128 GPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXX 185
LHA V+K F + F+ ASL+ YAK + + +F ++ D+ TW++++
Sbjct: 400 AVCLHAFVIKNGF---ENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAA 456
Query: 186 XXXXXXXXXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACSNLGALSQGVW 244
EAL LF M S +PN VT ++++SACS+ G + +G+
Sbjct: 457 YGFHGQGE------------EALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGIN 504
Query: 245 THCYLL-RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
++ + LK N +VD+ + G L++A + + +
Sbjct: 505 MFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNM 545
>Medtr4g015760.3 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 673
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 137/275 (49%), Gaps = 21/275 (7%)
Query: 26 KQVHAQMLTTGLALHTYCLSH-LLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTS 83
+ VH + GL + CL++ LL + K S A +F + + + ++T+++ +
Sbjct: 199 RSVHGFVKRKGLD-NKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYAD 257
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC-CGSGHWFQYGPPLHAHVLKFLEPP 142
+ ++ + L+N +L K ++PN T S+ +AC C S + G +H + +
Sbjct: 258 NGAETDV-LDLFNEML-DKRIKPNWVTVVSVLRACACISN--LEEGMKIHELAVNY-GFE 312
Query: 143 YDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDAD 202
+ V +L++ Y K + LF+++ + D+ W L D
Sbjct: 313 METTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYA------------DNG 360
Query: 203 LSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGT 262
+ E++++F +M S RP+ + LV +++ S LG L Q V H ++++N + N+F+G
Sbjct: 361 MVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGA 420
Query: 263 ALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+L+++Y+KC + A ++F +T +D ++++I
Sbjct: 421 SLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIA 455
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 115/245 (46%), Gaps = 20/245 (8%)
Query: 58 YALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTL----QPNSFTFPS 113
+A +F P+ TV+L+N L+ S+ + SL+ ++ ++ +P++++
Sbjct: 24 HAHKLFQETPHRTVYLWNALLRSYCFEGEWVE-TLSLFRQMNNVSSVSIEERPDNYSVSI 82
Query: 114 LFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISE 173
K+C G G +H LK + D FV ++L++ Y K G++ + +F + +
Sbjct: 83 ALKSCAGLRKLL-LGKVIHG-FLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPK 140
Query: 174 PDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR-RPNEVTLVALISA 232
PD+ W +++ E + AL F M +S + P+ VTLV++ SA
Sbjct: 141 PDVVLWTSIISGY------------EQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASA 188
Query: 233 CSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCY 292
C+ L G H ++ R L + +L+ +Y K G + A LF +++D+D +
Sbjct: 189 CAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISW 248
Query: 293 NAMIG 297
+ M+
Sbjct: 249 STMVA 253
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 128/281 (45%), Gaps = 26/281 (9%)
Query: 12 ILKLLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSK-LASTYALTIFSSIP 67
++ +L+ C ++ L++ +H + G + T + L+ + K + A+ +F+ +P
Sbjct: 283 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMP 342
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
V + L S + + +H + ++ +L+ T +P++ + G Q
Sbjct: 343 KKDVIAWAVLFSGYADNG-MVHESMWVFRNMLSSGT-RPDAIALVKILTTISELG-ILQQ 399
Query: 128 GPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXX 185
LHA V+K F + F+ ASL+ YAK + + +F ++ D+ TW++++
Sbjct: 400 AVCLHAFVIKNGF---ENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAA 456
Query: 186 XXXXXXXXXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACSNLGALSQGVW 244
EAL LF M S +PN VT ++++SACS+ G + +G+
Sbjct: 457 YGFHGQGE------------EALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGIN 504
Query: 245 THCYLL-RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
++ + LK N +VD+ + G L++A + + +
Sbjct: 505 MFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNM 545
>Medtr8g105720.1 | PPR containing plant-like protein | HC |
chr8:44583313-44585824 | 20130731
Length = 701
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 111/235 (47%), Gaps = 15/235 (6%)
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGS 121
+F +P V +NT+I+ F + + A + + + L+P+SFT S+
Sbjct: 182 VFDMMPVRDVVSWNTVIAGFAQNGMYVE-ALDMVREMGKNGKLKPDSFTLSSILPIFAEH 240
Query: 122 GHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
G +H + ++ D F+ +SL++ YAK RL S F + D +WN+
Sbjct: 241 VD-VNKGKEIHGYAVRN-GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNS 298
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
++ +++ + L F M +P V+ ++I AC++L ALS
Sbjct: 299 IIAGC-----------VQNGEFD-RGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSL 346
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G H ++R N F+ ++LVDMY+KCG + +A +FD++ RD + A+I
Sbjct: 347 GRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAII 401
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 154/311 (49%), Gaps = 41/311 (13%)
Query: 10 HPILKLLQKCH------SLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIF 63
H I K+L+K S KQ+HA ++ T LH+ + L S+ ++L +F
Sbjct: 7 HTISKILRKTPNKTLSVSTRQAKQLHAHIVKTKGTLHSDNILVLSLYSNLNLLQHSLHLF 66
Query: 64 SSIPNPTVFL-YNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSG 122
+S+P+P L ++++I +TSHS +HL+FS +N + + ++ PN FPSL KA
Sbjct: 67 NSLPSPPPPLAWSSIIKCYTSHS-LLHLSFSSFNSMRS-LSVPPNRHVFPSLLKASTLLK 124
Query: 123 HWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKY----------------GRLCVSRC 166
H + LHA ++ L D ++ +L+N YAK+ G CV +
Sbjct: 125 H-HKLAHSLHACTVR-LGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKK- 181
Query: 167 LFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVT 225
+FD + D+ +WNT++ + +EAL + +M + + +P+ T
Sbjct: 182 VFDMMPVRDVVSWNTVI------------AGFAQNGMYVEALDMVREMGKNGKLKPDSFT 229
Query: 226 LVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLT 285
L +++ + +++G H Y +RN + F+G++L+DMY+KC L + + F L
Sbjct: 230 LSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILP 289
Query: 286 DRDTFCYNAMI 296
+D +N++I
Sbjct: 290 RKDAISWNSII 300
>Medtr6g066360.1 | PPR containing plant-like protein | HC |
chr6:24701161-24699312 | 20130731
Length = 563
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 16/238 (6%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F + T+ + T++ + S + A L+N + H+ + + F +L C
Sbjct: 170 ARKVFDFMDEKTIVSWTTIMGGYVKVGSSVE-AVKLFNE-MQHQNIGLDFIVFVNLVSGC 227
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
+H+ VLK D ++ LL YA+ G L +R +FD I + +
Sbjct: 228 IQLREQL-LASSVHSLVLKCGCHEEDS-IKNLLLTMYARCGNLTSARIIFDLIVRKSVLS 285
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
W +++ EAL LF M M+ +PN TL ++SAC++LG+
Sbjct: 286 WTSMIAGYAHSRRPK------------EALDLFRRMVMTEIKPNRATLATVLSACADLGS 333
Query: 239 LSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L G Y N + + V T+LV MYSKCG +N A ++F+++ ++D +++MI
Sbjct: 334 LCIGEEIEQYAFENGFETDLQVQTSLVHMYSKCGNINKAREVFERVENKDLTLWSSMI 391
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 134/296 (45%), Gaps = 23/296 (7%)
Query: 8 FNHPILKLLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIF 63
F +P+L + C +L ++ +H + G T+ + L+ + SK + A +F
Sbjct: 11 FTYPLL--FKSCANLLSIPHGTMLHGHVFRLGFQADTFVQTSLVDMYSKCSVIESARKVF 68
Query: 64 SSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
+P +V +N+LIS++ H S + A SL +L +P+S TF S+ + +
Sbjct: 69 DEMPERSVVSWNSLISAYC-HESMMEKALSLIKEMLV-LGFKPSSSTFVSILSGYSSNLN 126
Query: 124 WFQY---GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWN 180
F++ G +H V+K ++ + SL+ YA++G++ +R +FD + E + +W
Sbjct: 127 SFEFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMDEARKVFDFMDEKTIVSWT 186
Query: 181 TLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALS 240
T++ S+EA+ LF +MQ + + V L+S C L
Sbjct: 187 TIMGGYVKVGS------------SVEAVKLFNEMQHQNIGLDFIVFVNLVSGCIQLREQL 234
Query: 241 QGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H +L+ + L+ MY++CG L A +FD + + + +MI
Sbjct: 235 LASSVHSLVLKCGCHEEDSIKNLLLTMYARCGNLTSARIIFDLIVRKSVLSWTSMI 290
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 104/202 (51%), Gaps = 19/202 (9%)
Query: 101 HKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGR 160
H ++ N+FT+P LFK+C +G LH HV + L D FVQ SL++ Y+K
Sbjct: 3 HSSVHGNTFTYPLLFKSCANLLS-IPHGTMLHGHVFR-LGFQADTFVQTSLVDMYSKCSV 60
Query: 161 LCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRR 220
+ +R +FD++ E + +WN+L+ + +AL L +M + +
Sbjct: 61 IESARKVFDEMPERSVVSWNSLISAYCH------------ESMMEKALSLIKEMLVLGFK 108
Query: 221 PNEVTLVALISA-CSNLGA---LSQGVWTHCYLLRNNLK-LNRFVGTALVDMYSKCGCLN 275
P+ T V+++S SNL + L QG+ HC++++ L + +L+ MY++ G ++
Sbjct: 109 PSSSTFVSILSGYSSNLNSFEFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMD 168
Query: 276 LACQLFDQLTDRDTFCYNAMIG 297
A ++FD + ++ + ++G
Sbjct: 169 EARKVFDFMDEKTIVSWTTIMG 190
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%)
Query: 214 MQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGC 273
M S N T L +C+NL ++ G H ++ R + + FV T+LVDMYSKC
Sbjct: 1 MHHSSVHGNTFTYPLLFKSCANLLSIPHGTMLHGHVFRLGFQADTFVQTSLVDMYSKCSV 60
Query: 274 LNLACQLFDQLTDRDTFCYNAMI 296
+ A ++FD++ +R +N++I
Sbjct: 61 IESARKVFDEMPERSVVSWNSLI 83
>Medtr2g086150.1 | PPR containing plant-like protein | HC |
chr2:36227786-36230819 | 20130731
Length = 867
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 30/247 (12%)
Query: 59 ALTIFSSIPN-PTVFL-YNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFK 116
A +F IP+ PT +N L+ S+ S Q A +L+ +L H +LQP+ T +F
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSY-SRDKQTKEALNLFVSLL-HSSLQPDESTLSCVFN 101
Query: 117 ACCGSGHWFQYGPPLHAHVLKFLEPPYDHF-VQASLLNFYAKYGRLCVSRCLFDQISEPD 175
C GS + G +H +KF DH V SL++ Y K + R +FD++ E +
Sbjct: 102 ICAGSLDG-KLGRQVHCQCVKF--GLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERN 158
Query: 176 LATWNTLLXXXXXXXXXXXXXXLEDADLSLEALY-----LFCDMQMSRRRPNEVTLVALI 230
+ +W +LL A S LY LFC MQ PN T+ +I
Sbjct: 159 VVSWTSLL-----------------AGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVI 201
Query: 231 SACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTF 290
+A N G + G+ H ++++ + V +L+ +YS+ G L A +FD++ RD
Sbjct: 202 AALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWV 261
Query: 291 CYNAMIG 297
+N+MI
Sbjct: 262 TWNSMIA 268
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 127/264 (48%), Gaps = 21/264 (7%)
Query: 25 LKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTS 83
+ ++HA+++ T + + LL KL +T A+ +F I + ++ +++ + +
Sbjct: 412 VSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGY-A 470
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPY 143
+ + A L+++++ + ++PN FTF S+ AC + G HA+ +K +
Sbjct: 471 QTGETEEAAKLFHQLIK-EGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIK-MRLNN 528
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
V ++L+ YAK G + + +F + E DL +WN+++
Sbjct: 529 ALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQ------------ 576
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRN---NLKLNRFV 260
+ +AL +F +MQ + VT + +I+AC++ G + +G ++ + N + +
Sbjct: 577 AKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHY- 635
Query: 261 GTALVDMYSKCGCLNLACQLFDQL 284
+ ++D+YS+ G L A + +++
Sbjct: 636 -SCMIDLYSRAGMLEKAMGIINEM 658
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 129/288 (44%), Gaps = 26/288 (9%)
Query: 15 LLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPN-P 69
+++ C SL L K + + L +G ++ L+ SK AL++FS +
Sbjct: 301 VIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGK 360
Query: 70 TVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGP 129
V + +IS + A +L+++ + + ++PN FT+ ++ H+ +
Sbjct: 361 NVVSWTAMISGCLQNGGNDQ-AVNLFSQ-MRREGVKPNHFTYSAILTV-----HYPVFVS 413
Query: 130 PLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXX 189
+HA V+K V +LL+ Y K G + +F+ I DL W+ +L
Sbjct: 414 EMHAEVIK-TNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQT 472
Query: 190 XXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSN-LGALSQGVWTHCY 248
+ EA LF + +PNE T ++I+AC++ A QG H Y
Sbjct: 473 GE------------TEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAY 520
Query: 249 LLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
++ L V +ALV MY+K G ++ A ++F + +RD +N+MI
Sbjct: 521 AIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMI 568
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 127/277 (45%), Gaps = 26/277 (9%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSH 84
+QVH Q + GL H + L+ + K + +F + V + +L++ + S
Sbjct: 113 RQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGY-SW 171
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLK--FLE-- 140
+ + L+ + + ++ + PN +T ++ A G G +HA V+K F E
Sbjct: 172 NGLYGYVWELFCQ-MQYEGVLPNRYTVSTVIAALVNEG-VVGIGLQVHAMVVKHGFEEAI 229
Query: 141 PPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLED 200
P ++ SL++ Y++ G L +R +FD++ D TWN+++
Sbjct: 230 PVFN-----SLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQ--------- 275
Query: 201 ADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFV 260
LE +F MQ++ +P +T ++I +C++L L+ C L++ ++ V
Sbjct: 276 ---DLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIV 332
Query: 261 GTALVDMYSKCGCLNLACQLFDQLTD-RDTFCYNAMI 296
TAL+ SKC ++ A LF + + ++ + AMI
Sbjct: 333 ITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMI 369
>Medtr5g018370.1 | PPR containing plant-like protein | HC |
chr5:6845861-6848150 | 20130731
Length = 714
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 135/290 (46%), Gaps = 23/290 (7%)
Query: 15 LLQKCH---SLNTLKQVHAQMLTTGLALHT---YCLSHLLTISSKLAS-TYALTIFSSIP 67
LL+KC SL +Q+HA +LTT A + + ++++++ S+ S A +F +P
Sbjct: 14 LLKKCRITTSLQEARQLHALLLTTTNASGSKSAFLYNNIISMYSRCGSLEDAHQVFDKMP 73
Query: 68 NPTVFLYNTLISSFTSHSSQ-IHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQ 126
T YN L+++++ S Q AF+LY + + + L+P++ T SL +A G
Sbjct: 74 QRTHVSYNALLAAYSRVSEQHCVYAFNLYTQ-MENMGLRPSNMTITSLLQAASLHGDLL- 131
Query: 127 YGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXX 186
G LHA LKF D VQ SLLN Y+ L + +F ++E D WN+L+
Sbjct: 132 IGLLLHAKSLKF-GFLNDICVQTSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGY 190
Query: 187 XXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTH 246
D + +YLF +M P T ++SACS L G H
Sbjct: 191 LKN------------DKIEKGVYLFIEMMWVGFTPTVYTFCMILSACSRLKDYFSGRLIH 238
Query: 247 CYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
++ N+ + + ALVDMY G A +F ++ D +N+MI
Sbjct: 239 ARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMI 288
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 123/273 (45%), Gaps = 20/273 (7%)
Query: 28 VHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSHSS 86
+HA+++ ++ + + L+ + T A IFS + + +N++IS + +
Sbjct: 237 IHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENED 296
Query: 87 QIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLK--FLEPPYD 144
A +L+ ++ A +P+ +T+ + A G+ F YG PLH V+K F+
Sbjct: 297 G-EKAMNLFVQLKALCFPKPDDYTYAGIISAT-GAFPCFSYGKPLHGQVIKAGFVRSV-- 352
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
FV ++L++ Y K + +F I D W ++ AD
Sbjct: 353 -FVGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTEMITGYSKM-----------AD-G 399
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTAL 264
+ A+ F +M ++ L ++S C+ L L QG HCY + + V +L
Sbjct: 400 MGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQGEIIHCYAYKLGYDVEMSVSGSL 459
Query: 265 VDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+DMY+K G L A +F Q++ D C+N+M+G
Sbjct: 460 IDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLG 492
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 19/224 (8%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTYA-LTIFSSIPNPTVFLYNTLISSFTSH 84
K +H Q++ G + S L+++ K T A L +F SIP L+ +I+ ++
Sbjct: 337 KPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTEMITGYSKM 396
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
+ + A ++ + H+ + + + + C Q G +H + K L +
Sbjct: 397 ADGMG-AIRCFSE-MHHEVHEIDDYVLSGVLSVCAYLAILRQ-GEIIHCYAYK-LGYDVE 452
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
V SL++ YAK G L + +F Q+S PDL WN++L +
Sbjct: 453 MSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGG------------FSHHGMV 500
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG--VWTH 246
+AL LF ++ P++VT ++L+SACS+ + QG +W +
Sbjct: 501 DDALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLLWNY 544
>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:26032045-26029503 | 20130731
Length = 633
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 131/297 (44%), Gaps = 24/297 (8%)
Query: 8 FNHPILKLLQKCHSLN---TLKQVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIF 63
F P+L L+ C L+ T Q+H+ +L TG Y S L+ + SK + A +F
Sbjct: 60 FTFPVL--LKSCALLSLPFTGSQLHSHILKTGSQPDPYTHSSLINMYSKTSLPCLARKVF 117
Query: 64 SSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
P YN +IS +T++ + A L+ R+L NS T L
Sbjct: 118 DESPVNLTISYNAMISGYTNNMMIVE-AIKLFRRMLCENRFFVNSVTMLGLVSGIL-VPE 175
Query: 124 WFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
+ G LH KF D V S L Y K G + R +FD+I DL TWN ++
Sbjct: 176 KLRLGFCLHGCCFKF-GFENDLSVGNSFLTMYVKCGEVEYGRKVFDEILVKDLITWNAMI 234
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACSNLGALSQG 242
+ L ++ +M ++ P+ VTL+ ++ +C+NLGA G
Sbjct: 235 SGYAQNGH------------ARRVLEIYREMRKVGGVNPDPVTLLGVLCSCANLGAQGIG 282
Query: 243 VWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDR--DTFCYNAMIG 297
+ R + N F+ AL++MY++CG L A ++FD + +R + A+IG
Sbjct: 283 REVEKEIDRFGFRSNSFLMNALINMYARCGNLVRAREVFDCMDERSKSVVSWTAIIG 339
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 83 SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPP 142
S + A ++Y +L + PN+FTFP L K+C F G LH+H+LK P
Sbjct: 35 SKQRKFMEALTVYRHML-RSSFFPNTFTFPVLLKSCALLSLPFT-GSQLHSHILKTGSQP 92
Query: 143 YDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDAD 202
D + +SL+N Y+K C++R +FD+ ++N ++
Sbjct: 93 -DPYTHSSLINMYSKTSLPCLARKVFDESPVNLTISYNAMISGYTNNM------------ 139
Query: 203 LSLEALYLFCDMQMSRR-RPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG 261
+ +EA+ LF M R N VT++ L+S L G H + + + VG
Sbjct: 140 MIVEAIKLFRRMLCENRFFVNSVTMLGLVSGILVPEKLRLGFCLHGCCFKFGFENDLSVG 199
Query: 262 TALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ + MY KCG + ++FD++ +D +NAMI
Sbjct: 200 NSFLTMYVKCGEVEYGRKVFDEILVKDLITWNAMI 234
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 30/287 (10%)
Query: 7 IFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFSSI 66
+ + ++ + KC +N + V +M + T +S SS A A +FS++
Sbjct: 289 VLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKA---ARLMFSNM 345
Query: 67 PNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQ 126
V +N LI+ +T + A L+ +L +++ P +TF +L AC +
Sbjct: 346 MERNVVSWNALIAGYTQNGEN-EEAVRLF-LLLKRESIWPTHYTFGNLLNACANLAD-LK 402
Query: 127 YGPPLHAHVLKF-----LEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
G H H+LK D FV SL++ Y K G + R +F+++ E D +WN
Sbjct: 403 LGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNA 462
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
++ EAL +F +M +S RP+ VT++ ++SACS+ G + +
Sbjct: 463 MIVGYAQNGY------------GTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEE 510
Query: 242 GVWTHCYL----LRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
G CY + + L + T +VD+ + GCL+ A L +
Sbjct: 511 G---RCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTM 554
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 133/288 (46%), Gaps = 24/288 (8%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
++ + KC L ++V M +T+ + +L +K + AL +F +P
Sbjct: 60 LVDVYGKCGFLEDARKVFDHMQQR----NTFSWNAVLGALTKFGALDEALNLFKCMPERD 115
Query: 71 VFLYNTLISSFTSHSS-QIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGP 129
+N ++S F + L F + + + N ++F S AC G G
Sbjct: 116 QCSWNAMVSGFAQRDRFEEALRFVVD---MHSEDFVLNEYSFGSALSACAGLMD-LSIGV 171
Query: 130 PLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXX 189
+H + K D ++ ++L++ Y+K + ++ FD + ++ +WN+L+
Sbjct: 172 QIHGLIAKS-RYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCY--- 227
Query: 190 XXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYL 249
E + +AL +F M P+E+TL ++ SAC++L A+ +G+ H +
Sbjct: 228 ---------EQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARV 278
Query: 250 LRNNLKLNRFV-GTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
++++ N V G ALVDMY+KC +N A +FD++ RD +M+
Sbjct: 279 MKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMV 326
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 132/296 (44%), Gaps = 29/296 (9%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSK-LASTYALTIFSSIPNPTVFLYNTLISSFTSHS 85
Q+H + + +L Y S L+ + SK A F + + +N+LI+ + +
Sbjct: 172 QIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCY-EQN 230
Query: 86 SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDH 145
A ++ R++ + ++P+ T S+ AC S + G +HA V+K + D
Sbjct: 231 GPAGKALEVFVRMM-NCGIEPDEITLASVASACA-SLSAIREGLQIHARVMKHDKYRNDL 288
Query: 146 FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXX-----XLED 200
+ +L++ YAK R+ +R +FD++ D+ + +++ +E
Sbjct: 289 VLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMER 348
Query: 201 ADLSL--------------EALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTH 246
+S EA+ LF ++ P T L++AC+NL L G H
Sbjct: 349 NVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAH 408
Query: 247 CYLLRNNL------KLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
++L++ + FVG +L+DMY KCG + +F+++ +RD +NAMI
Sbjct: 409 THILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMI 464
>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:452191-449631 | 20130731
Length = 827
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 37/229 (16%)
Query: 97 RILAHKTLQPNSFTFPSLFKA----CCGSGHWFQYGPPLHA-HVLKFLEPPYDHFVQASL 151
R L + ++P+SFT S+ C + G +H+ ++K L+ + FV +L
Sbjct: 395 RDLLMEGIEPDSFTLGSILTGFADMTC-----IRQGKEIHSIAIVKGLQS--NSFVGGAL 447
Query: 152 LNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXL------------- 198
+ Y K + ++ FD+ISE D +TWN L+ L
Sbjct: 448 VEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNV 507
Query: 199 -----------EDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
E+ L A+ LF +MQ+S RP+ T+ +++ACS L + +G H
Sbjct: 508 YTWNSILAGLVENKQYDL-AMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHA 566
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
Y +R + +G LVDMY+KCG + Q+++++++ + C+NAM+
Sbjct: 567 YSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAML 615
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 141/322 (43%), Gaps = 40/322 (12%)
Query: 5 NPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFS 64
N + ++ + KC SL+ K+V M C+S I++ +A+
Sbjct: 168 NVYVGNALIDMYGKCGSLDEAKKVLEGMTQKD------CVSWNSIITACVANGVVYEALD 221
Query: 65 SIPN-------PTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKA 117
+ N P V ++ +I F+S++ + + L+ R++ + P++ T S+ A
Sbjct: 222 LLENMLLSELEPNVVTWSAVIGGFSSNAYDVE-SVELFARMVG-AGVAPDARTLASVLPA 279
Query: 118 CCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLA 177
C W G LH ++++ E + FV +L+ Y + G + + +F + + A
Sbjct: 280 CS-RMKWLFVGKELHGYIVRH-ELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAA 337
Query: 178 TWNTLLXXXXXXXXXXXXXXL---------EDADLSL--------------EALYLFCDM 214
++NT++ L E +S +AL LF D+
Sbjct: 338 SYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDL 397
Query: 215 QMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCL 274
M P+ TL ++++ +++ + QG H + L+ N FVG ALV+MY KC +
Sbjct: 398 LMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDI 457
Query: 275 NLACQLFDQLTDRDTFCYNAMI 296
A FD++++RDT +NA+I
Sbjct: 458 IAAQMAFDEISERDTSTWNALI 479
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 135/311 (43%), Gaps = 36/311 (11%)
Query: 15 LLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLL---TISSKLASTYALTIFSSIPNPTV 71
+LQ +SL KQ+H+ + TG H + + LL +I+S + + ++ N
Sbjct: 40 ILQSSNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHS 99
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQP-NSFTFPSLFKACCGSGHWFQYGPP 130
+ T + + + F L+ L + + F FP + CCG G + G
Sbjct: 100 W---TAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGD-LELGRQ 155
Query: 131 LHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXX-XX 187
+H VLK F+ Y V +L++ Y K G L ++ + + +++ D +WN+++
Sbjct: 156 VHGMVLKHGFVTNVY---VGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVA 212
Query: 188 XXXXXXXXXXLEDADLS----------------------LEALYLFCDMQMSRRRPNEVT 225
LE+ LS +E++ LF M + P+ T
Sbjct: 213 NGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDART 272
Query: 226 LVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLT 285
L +++ ACS + L G H Y++R+ L N FV ALV MY +CG + A ++F +
Sbjct: 273 LASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFA 332
Query: 286 DRDTFCYNAMI 296
+ YN MI
Sbjct: 333 RKCAASYNTMI 343
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 21/233 (9%)
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
P V+ +N++++ + Q LA L+N + +L+P+ +T + AC
Sbjct: 504 EPNVYTWNSILAGLVE-NKQYDLAMQLFNEMQV-SSLRPDIYTVGIILAACSKLAT-IHR 560
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G +HA+ ++ D + A+L++ YAK G + ++++IS P+L N +L
Sbjct: 561 GKQVHAYSIR-AGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYA 619
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
E + +F M SR RP+ VT ++++S+C + G++ G C
Sbjct: 620 MHGHGE------------EGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGY--EC 665
Query: 248 YLLRNNLKLNRFVG--TALVDMYSKCGCLNLACQLFDQL-TDRDTFCYNAMIG 297
+ L + + T +VD+ S+ G L+ A QL + + D+ ++A++G
Sbjct: 666 FYLMETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLG 718
>Medtr5g025580.1 | PPR containing plant-like protein | HC |
chr5:10385696-10382561 | 20130731
Length = 767
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 134/294 (45%), Gaps = 32/294 (10%)
Query: 12 ILKLLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTI---SSKLASTYA-LTIFS 64
+ +L C+S N+L K VH L +G HT ++ L+ + S L S ++ L S
Sbjct: 322 VFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQENS 381
Query: 65 SIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHW 124
SI + + +NT+I Q A + + + +S T ++ A
Sbjct: 382 SIAD--IASWNTIIVGCV-RGDQFQEALETFMLMRQGPSFNYDSITLVNVLSAVANI-EL 437
Query: 125 FQYGPPLHAHVLKFLEPPY--DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTL 182
G LH+ LK P+ D VQ SL+ Y + + +R +F S +L TWN +
Sbjct: 438 LNQGKSLHSLALK---SPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCM 494
Query: 183 LXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG 242
+ L S EAL LF +Q +PNE T+V+++SAC+ +G L G
Sbjct: 495 ISA------------LSHNKESREALELFRHLQF---KPNEFTIVSVLSACTRIGVLIHG 539
Query: 243 VWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H Y R + N F+ ALVD+YS CG L+ A ++F + + +N+MI
Sbjct: 540 KQVHGYTFRYGYQQNSFISAALVDLYSTCGRLDNAVKVFRH-SQKSESAWNSMI 592
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 80/151 (52%), Gaps = 16/151 (10%)
Query: 150 SLLNFYAKYGRL--CVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEA 207
+L+N YAK G + S CLF+++ D+ +WN+++ L + DL ++
Sbjct: 50 ALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGC-----------LYNGDLE-KS 97
Query: 208 LYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTA--LV 265
L F M S R + V+L ISACS+LG L+ G H ++ K N FV A L+
Sbjct: 98 LCYFRRMNFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLI 157
Query: 266 DMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+YS+C +++A +F ++ +D +NAM+
Sbjct: 158 SLYSQCEAVDVAETVFREMAYKDIVSWNAMM 188
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 131/287 (45%), Gaps = 32/287 (11%)
Query: 4 QNPIFNHP------ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSK---L 54
Q P FN+ +L + LN K +H+ L + T + L+T+ + +
Sbjct: 414 QGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDI 473
Query: 55 ASTYALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSL 114
S + F SI N + +N +IS+ SH+ + A L+ H +PN FT S+
Sbjct: 474 NSARKVFKFHSISN--LCTWNCMISAL-SHNKESREALELFR----HLQFKPNEFTIVSV 526
Query: 115 FKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEP 174
AC G +G +H + ++ + F+ A+L++ Y+ GRL + +F S+
Sbjct: 527 LSACTRIGVLI-HGKQVHGYTFRY-GYQQNSFISAALVDLYSTCGRLDNAVKVFRH-SQK 583
Query: 175 DLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACS 234
+ WN+++ + + ++E + CD+ + + + T V+L+SACS
Sbjct: 584 SESAWNSMIAAYGNHG---------NGEKAIELFHEMCDLGI---KVTKSTFVSLLSACS 631
Query: 235 NLGALSQGV-WTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQL 280
+ G ++QG+ + C L + +K +V+M ++ G ++ A Q
Sbjct: 632 HSGLVNQGLQYYECMLEKYGIKPEAEHQVYVVNMLARSGRIDEAYQF 678
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 17/184 (9%)
Query: 117 ACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQA--SLLNFYAKYGRLCVSRCLFDQISEP 174
+ C S +G +H +K L + FV SL++ Y++ + V+ +F +++
Sbjct: 121 SACSSLGELAFGECIHGQGIK-LGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYK 179
Query: 175 DLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSR-RRPNEVTLVALISAC 233
D+ +WN ++ EA L +MQ + +P+ VTL ++ C
Sbjct: 180 DIVSWNAMMEGYASNENIH------------EAFDLMVEMQTTGCFQPDIVTLTTMLPLC 227
Query: 234 SNLGALSQGVWTHCYLLRNNLKLNRF-VGTALVDMYSKCGCLNLACQLFDQLTDRDTFCY 292
+ L +G H Y +R ++ + + L+DMYSKC + A LF D +
Sbjct: 228 AELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSW 287
Query: 293 NAMI 296
NAMI
Sbjct: 288 NAMI 291
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 116/271 (42%), Gaps = 32/271 (11%)
Query: 16 LQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY--------ALTIFS 64
+ C SL L + +H Q + G Y + +++++ L S Y A T+F
Sbjct: 120 ISACSSLGELAFGECIHGQGIKLG-----YKDNSFVSVANSLISLYSQCEAVDVAETVFR 174
Query: 65 SIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHW 124
+ + +N ++ + S+ + IH AF L + QP+ T ++ C
Sbjct: 175 EMAYKDIVSWNAMMEGYASNEN-IHEAFDLMVEMQTTGCFQPDIVTLTTML-PLCAELML 232
Query: 125 FQYGPPLHAHVLKFLEPPYDHF-VQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
++ G +H + ++ P DH ++ L++ Y+K + + LF ++ DL +WN ++
Sbjct: 233 YREGRTIHGYAIRRHMVP-DHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMI 291
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
+A LF ++ + + T+ A++S+C++ +L+ G
Sbjct: 292 SGYSQNKYYE------------KAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLNFGK 339
Query: 244 WTHCYLLRNNLKLNRFVGTALVDMYSKCGCL 274
H + L++ + + +L+ MY G L
Sbjct: 340 SVHIWQLKSGFLNHTLLVNSLMQMYINSGDL 370
>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:27881892-27885186 | 20130731
Length = 684
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 27/252 (10%)
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
P + +N +I+ F + A L++ +++ L P+ T + G+
Sbjct: 61 EPNLVSWNGMIAGF-GNVGLYDEAVRLFHEMVSEGFL-PDGSTVSCVLPGV-GNLEDVLM 117
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G +H +V+K L D +V ++LL+ Y + G +FD+I + ++ + N L
Sbjct: 118 GKQVHGYVIK-LGLESDKYVVSALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLS 176
Query: 188 XXXXXXXXXXL----EDADLSL-------------------EALYLFCDMQMSRRRPNEV 224
+ + +L L EAL LF DMQ PN V
Sbjct: 177 RNGLVDTALDVFKKFKAGELELNVVTWTSIIASCVQNGKDMEALELFRDMQADGVEPNAV 236
Query: 225 TLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
T+ +LI AC N+ AL+ G HC+ LR + + +VG+AL+DMY+ CG + L+ FD++
Sbjct: 237 TIPSLIPACGNISALTHGKEIHCFSLRKGIFDDVYVGSALIDMYANCGRIRLSQNCFDEM 296
Query: 285 TDRDTFCYNAMI 296
R+ +N+++
Sbjct: 297 PFRNLVSWNSIM 308
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 106/252 (42%), Gaps = 50/252 (19%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALT-IFSSIPNPTVFLYNTLISSFTSH 84
KQVH ++ GL Y +S LL + + ++ +F I + N ++ + +
Sbjct: 119 KQVHGYVIKLGLESDKYVVSALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRN 178
Query: 85 --------------SSQIHLAFSLYNRILAH-------------------KTLQPNSFTF 111
+ ++ L + I+A ++PN+ T
Sbjct: 179 GLVDTALDVFKKFKAGELELNVVTWTSIIASCVQNGKDMEALELFRDMQADGVEPNAVTI 238
Query: 112 PSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDH-FVQASLLNFYAKYGRLCVSRCLFDQ 170
PSL AC G+ +G +H L+ + +D +V ++L++ YA GR+ +S+ FD+
Sbjct: 239 PSLIPAC-GNISALTHGKEIHCFSLR--KGIFDDVYVGSALIDMYANCGRIRLSQNCFDE 295
Query: 171 ISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALI 230
+ +L +WN+++ + E + +F M S ++P+ +T +++
Sbjct: 296 MPFRNLVSWNSIMSGYAMHGK------------AKETIEMFHMMLQSGQKPDSITFTSVL 343
Query: 231 SACSNLGALSQG 242
SAC+ G +G
Sbjct: 344 SACTQNGLTEEG 355
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 77/157 (49%), Gaps = 16/157 (10%)
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQIS----EPDLATWNTLLXXXXXXXXXXXXXXLE 199
D V ++++ Y++ G + ++ +F ++ EP+L +WN ++
Sbjct: 28 DVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVEPNLVSWNGMIAG------------FG 75
Query: 200 DADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRF 259
+ L EA+ LF +M P+ T+ ++ NL + G H Y+++ L+ +++
Sbjct: 76 NVGLYDEAVRLFHEMVSEGFLPDGSTVSCVLPGVGNLEDVLMGKQVHGYVIKLGLESDKY 135
Query: 260 VGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
V +AL+DMY +CGC ++FD++ + NA +
Sbjct: 136 VVSALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFL 172
>Medtr1g103660.1 | PPR containing plant-like protein | HC |
chr1:46920306-46922872 | 20130731
Length = 684
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 19/276 (6%)
Query: 24 TLKQVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFSSIPNPTVFLYNTLISSFT 82
T KQ+H L G+ + + K A +F +P+ + +N IS+
Sbjct: 126 TGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFHGDACNMFDEMPHRNLATWNAYISNAV 185
Query: 83 SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPP 142
+ + + + H +PNS TF + AC G LHA +++
Sbjct: 186 QDRRSLDVIAAFKEFLCVHG--EPNSITFCAFLNACVDMMR-LNLGRQLHAFIVR-CGYK 241
Query: 143 YDHFVQASLLNFYAKYGRLCVSRCLFDQIS-EPDLATWNTLLXXXXXXXXXXXXXXLEDA 201
D V L++FY K G + + +F +I ++ +W ++L L
Sbjct: 242 EDVSVANGLIDFYGKCGDIVSAEMVFSRIGNRKNVVSWCSMLTA------------LVQN 289
Query: 202 DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG 261
A +F ++ P + + +++SAC+ LG L G H ++ +K N FVG
Sbjct: 290 HEEERACMVFLQVR-KEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVKDNIFVG 348
Query: 262 TALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+ALVD+Y KCG + A Q+F +L + + +NAMIG
Sbjct: 349 SALVDLYGKCGSIENAEQVFSELPESNLVTWNAMIG 384
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 24/267 (8%)
Query: 26 KQVHAQMLTTGLA-LHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTS 83
+ +HA ++ T + L ++ +HL+ + SKL A + S TV + +LIS
Sbjct: 26 RTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSFTHLRTVVTWTSLISGCVH 85
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY---GPPLHAHVLKFLE 140
+ + N + +QPN FTFP +FKA Q G +H LK
Sbjct: 86 NRRFLPALLHFTN--MRRDNVQPNDFTFPCVFKASA----LMQIPMTGKQIHGLALKG-G 138
Query: 141 PPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLED 200
YD FV S + Y K G + +FD++ +LATWN + ++D
Sbjct: 139 MIYDVFVGCSCFDMYCKTGFHGDACNMFDEMPHRNLATWNAYI-----------SNAVQD 187
Query: 201 ADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFV 260
SL+ + F + PN +T A ++AC ++ L+ G H +++R K + V
Sbjct: 188 RR-SLDVIAAFKEFLCVHGEPNSITFCAFLNACVDMMRLNLGRQLHAFIVRCGYKEDVSV 246
Query: 261 GTALVDMYSKCGCLNLACQLFDQLTDR 287
L+D Y KCG + A +F ++ +R
Sbjct: 247 ANGLIDFYGKCGDIVSAEMVFSRIGNR 273
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 128/287 (44%), Gaps = 33/287 (11%)
Query: 22 LNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPN-PTVFLYNTLIS 79
LN +Q+HA ++ G + L+ K A +FS I N V + ++++
Sbjct: 225 LNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFSRIGNRKNVVSWCSMLT 284
Query: 80 SFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFL 139
+ + + + K ++P F S+ AC G + G +HA +K
Sbjct: 285 ALVQNHEEERACMVF---LQVRKEVEPTDFMISSVLSACAELGG-LELGRSVHALAVKAC 340
Query: 140 EPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLE 199
+ FV ++L++ Y K G + + +F ++ E +L TWN ++
Sbjct: 341 VKD-NIFVGSALVDLYGKCGSIENAEQVFSELPESNLVTWNAMIGGYA-----------H 388
Query: 200 DADLSLEALYLFCDMQMSRR--RPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLN 257
D+ + AL LF +M + R RP+ VTLV+++S CS +GA+ +G+ + +++LN
Sbjct: 389 QGDIDM-ALRLFEEMTLGSRGIRPSYVTLVSILSVCSRVGAVERGIQ-----IFESMRLN 442
Query: 258 RFVGTA------LVDMYSKCGCLNLACQLFDQLTDRDTF-CYNAMIG 297
+ +VD+ + G ++ A + + + T + A++G
Sbjct: 443 YGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMPIQPTISVWGALLG 489
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 12/169 (7%)
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G +HAH+++ P F+ L+N Y+K L ++ + + TW +L+
Sbjct: 25 GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSFTHLRTVVTWTSLISGCV 84
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
L AL F +M+ +PN+ T + A + + G H
Sbjct: 85 HNRRF------------LPALLHFTNMRRDNVQPNDFTFPCVFKASALMQIPMTGKQIHG 132
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L+ + + FVG + DMY K G AC +FD++ R+ +NA I
Sbjct: 133 LALKGGMIYDVFVGCSCFDMYCKTGFHGDACNMFDEMPHRNLATWNAYI 181
>Medtr6g018720.1 | PPR containing plant-like protein | HC |
chr6:7213956-7209580 | 20130731
Length = 535
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 22/238 (9%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
AL F +P T ++ +I F + + + A K + +
Sbjct: 136 ALLAFEEMPGKTRVSWSQMIGGFARNG----------DTLTARKFFDKVPYELKDVVIWT 185
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
+ + G A + L P ++FV +S++ Y K G + + +F +I +L
Sbjct: 186 MMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEI 245
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
WN+++ +AL F +M + P+E T+V+++SAC+ LG
Sbjct: 246 WNSMIAGYVQN------------GCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGD 293
Query: 239 LSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L G H + + +N+FV + L+DMY+KCG L A +F+ +R+ FC+NAMI
Sbjct: 294 LDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMI 351
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 105/240 (43%), Gaps = 17/240 (7%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A IF IP + ++N++I+ + + A + + +P+ FT S+ AC
Sbjct: 231 AEAIFRRIPVRNLEIWNSMIAGYVQNGCG-EKALEAFGE-MGVDGFEPDEFTVVSVLSAC 288
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
G G +H H+++ + FV + L++ YAK G L +R +F+ +E ++
Sbjct: 289 AQLGD-LDAGKQMH-HMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFC 346
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
WN ++ E L M+ S RP+ VT + ++SAC++ G
Sbjct: 347 WNAMIAGFAVNGQCN------------EVLEYLDRMEESNIRPDAVTFITVLSACAHGGL 394
Query: 239 LSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDR-DTFCYNAMIG 297
+S+ + + +++ +VD+ + G L A +L ++ + + AMIG
Sbjct: 395 VSEALEVISKMEEYGIEMGIRHYGCMVDLLGRAGRLKEAYELIKRMPMKPNETVLGAMIG 454
>Medtr2g021710.1 | PPR containing plant-like protein | HC |
chr2:7399056-7396074 | 20130731
Length = 727
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 25/259 (9%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F I + V + T+I + ++ A +Y R + PN +L AC
Sbjct: 270 ARELFDGICDKDVISWGTMIDGYI-QKGRLREALEIY-RAMLQTGHGPNEVMIVNLVSAC 327
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
G G G LH V+K Y+ F+Q +++ FYA G + ++ F+ + L +
Sbjct: 328 -GRGTAIVDGWQLHGTVVKRGFDCYN-FIQTTIIYFYAACGMMDLACLQFEVGVKDHLES 385
Query: 179 WNTLLXXXXXXXXXXXXXXLED-------------------ADLSLEALYLFCDMQMSRR 219
WN L D ++ AL LF M
Sbjct: 386 WNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGI 445
Query: 220 RPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQ 279
+PNEVT+V++ SA + LG L +G H Y+ ++ N + AL+DMY+KCG +N A Q
Sbjct: 446 KPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSALQ 505
Query: 280 LFDQLTDRDTFC--YNAMI 296
F+Q+ D + +NA+I
Sbjct: 506 FFNQIRDEVSSVSPWNAII 524
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 138/348 (39%), Gaps = 78/348 (22%)
Query: 12 ILKLLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSK--------------- 53
++ L+ C SL+ + +Q+H+ + GL +T+ + L+ + +K
Sbjct: 56 LVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFA 115
Query: 54 ---------LASTY--------ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYN 96
+ S Y A +F +PN Y T+I F + A ++
Sbjct: 116 TLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGF-FREALEVFK 174
Query: 97 RILAHKTLQPNSFTFPSLFKACCGSGH-------------WFQYG------PPLHAHVL- 136
+ + + PN T ++ AC G F G +HA+ L
Sbjct: 175 DMRSCGVV-PNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLC 233
Query: 137 --------KFLEPPYDHFVQAS-LLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
F E P + V + +LN YAK G + +R LFD I + D+ +W T++
Sbjct: 234 SGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGY- 292
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
++ L EAL ++ M + PNEV +V L+SAC A+ G H
Sbjct: 293 ----------IQKGRLR-EALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHG 341
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAM 295
+++ F+ T ++ Y+ CG ++LAC F+ +NA+
Sbjct: 342 TVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNAL 389
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 27/239 (11%)
Query: 79 SSFTSHSSQ--IHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVL 136
S+FT + Q IH+ + N H+ + S K+C S + G +H+ +
Sbjct: 26 STFTKPNPQHFIHIFTNARN----HQNHHDSELALVSALKSCS-SLSFISQGRQIHSLIF 80
Query: 137 KFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXX 196
K L ++ F+Q SL+N YAK G + ++ LFD + D + N ++
Sbjct: 81 K-LGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNAR 139
Query: 197 XLEDA-------------------DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLG 237
L D EAL +F DM+ PN++TLV +ISACS+LG
Sbjct: 140 KLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLG 199
Query: 238 ALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ H +++ + V T L+ Y C + A +LFD++ +R+ +N M+
Sbjct: 200 EVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVML 258
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 92/187 (49%), Gaps = 18/187 (9%)
Query: 58 YALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKA 117
+AL F + VF ++T+IS + + S +A L++++LA ++PN T S+F A
Sbjct: 401 HALKTFDKMHVRDVFSWSTMISGY-AQSEHPKMALELFHKMLA-GGIKPNEVTMVSVFSA 458
Query: 118 CCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEP--D 175
G Q G H + ++ P++ ++A+L++ YAK G + + F+QI +
Sbjct: 459 IATLGT-LQEGKLAHEY-MRSESIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSS 516
Query: 176 LATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSN 235
++ WN ++ A + LE +F DMQ +PN +T + ++SAC +
Sbjct: 517 VSPWNAIICGLASHGH---------ASMCLE---VFSDMQRFHIKPNPITFIGVLSACCH 564
Query: 236 LGALSQG 242
G + G
Sbjct: 565 AGLVESG 571
>Medtr5g012660.1 | PPR containing plant-like protein | HC |
chr5:3861054-3862731 | 20130731
Length = 519
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 142/329 (43%), Gaps = 68/329 (20%)
Query: 26 KQVHAQMLTTG-LALHTYCLSHLLTISSKL-ASTYALTIFSSIPNPTVFLYNTLISSFTS 83
+Q+H+ + +G + Y + L+ K+ T+A +F IP P V +NTLIS +
Sbjct: 25 QQIHSYAIRSGYFHANIYVSTTLIKFYVKMHLFTHAHNLFVEIPQPNVVSWNTLISGYV- 83
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPY 143
H+ Q A SL+ + L + ++F+F S AC + G +H+ +K L
Sbjct: 84 HAGQFKKALSLFTK-LERSQICADAFSFTSAMVACA-QLSLLKLGSSIHSKTVK-LGMDN 140
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISE------------------------------ 173
+ V L++ Y K G + + +F I++
Sbjct: 141 NTVVANCLIDMYGKCGSVERAVRIFSDIADKDVISWNSVIAACANNGNIGLGFKFLQLMP 200
Query: 174 -PDLATWNTLLXXXXXXXXXXXXXXLEDADLSL-------------------------EA 207
PD+ ++N L+ +EDA L EA
Sbjct: 201 NPDVVSYNGLINGIAQAGK------IEDAVRILSTMPCPNSSSWNSVITGFVNRSRVPEA 254
Query: 208 LYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDM 267
L +F M + + +E T +++ ++L AL+ G+ HC ++ L + VG++L+DM
Sbjct: 255 LEMFGKMHLKNLQIDEFTFSIILNGIASLSALTWGMLIHCCTIKYGLDSSIVVGSSLIDM 314
Query: 268 YSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
YSKCG +N A +F+ L++R+ +NAMI
Sbjct: 315 YSKCGQVNDAESIFNVLSNRNLVSWNAMI 343
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 126 QYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXX 185
++G +H++ ++ + +V +L+ FY K + LF +I +P++ +WNTL+
Sbjct: 22 KFGQQIHSYAIRSGYFHANIYVSTTLIKFYVKMHLFTHAHNLFVEIPQPNVVSWNTLISG 81
Query: 186 XXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWT 245
A +AL LF ++ S+ + + + + AC+ L L G
Sbjct: 82 YVH------------AGQFKKALSLFTKLERSQICADAFSFTSAMVACAQLSLLKLGSSI 129
Query: 246 HCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H ++ + N V L+DMY KCG + A ++F + D+D +N++I
Sbjct: 130 HSKTVKLGMDNNTVVANCLIDMYGKCGSVERAVRIFSDIADKDVISWNSVI 180
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 91/178 (51%), Gaps = 19/178 (10%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A+ I S++P P +N++I+ F + S ++ A ++ + + K LQ + FTF +
Sbjct: 223 AVRILSTMPCPNSSSWNSVITGFVNRS-RVPEALEMFGK-MHLKNLQIDEFTFSIILNGI 280
Query: 119 CGSGHWFQYGPPLHAHVLKF-LEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLA 177
S +G +H +K+ L+ V +SL++ Y+K G++ + +F+ +S +L
Sbjct: 281 A-SLSALTWGMLIHCCTIKYGLDSSI--VVGSSLIDMYSKCGQVNDAESIFNVLSNRNLV 337
Query: 178 TWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR-RPNEVTLVALISACS 234
+WN ++ + D S +A+ LF ++M R +P+ +T + +ISACS
Sbjct: 338 SWNAMIYGYA-----------RNGD-SAQAISLFELLKMERDTKPDGITFLNVISACS 383
>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:18723182-18719939 | 20130731
Length = 881
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 115/239 (48%), Gaps = 18/239 (7%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
AL F+ V +N +IS + + +A +L++ + +L PNS+TFPS+ AC
Sbjct: 190 ALRFFNDASCDNVASWNAIIS-LAVKNGENQVALNLFSE-MCRASLMPNSYTFPSILTAC 247
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
C Q G +H +K D FV+ ++++ YAK+G + + F Q+ ++ +
Sbjct: 248 CALKE-MQIGKGVHGLAIKC--GATDVFVETAIVDLYAKFGCMSEAYRQFSQMQVQNVVS 304
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
W ++ D + AL LF DM+ N T+ +++SAC+
Sbjct: 305 WTAIISGFV------------QQDDTTFALKLFKDMRQIGHEINAYTVTSVLSACAKPEL 352
Query: 239 LSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTD-RDTFCYNAMI 296
+ + H +L+ L LN VG ALV+MY+K G + L+ F ++ + +D + +M+
Sbjct: 353 IEEAKQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEMKNMKDPGIWASML 411
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 136/289 (47%), Gaps = 25/289 (8%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLA----STYALTIFSSIP 67
+L K + KQ+H+ +L GL L+ + L+ + +K+ S A + ++
Sbjct: 343 VLSACAKPELIEEAKQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEMKNMK 402
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
+P + + +++SSF + + A L+ ++ + ++P+ + SL Q
Sbjct: 403 DPGI--WASMLSSFAQNRNSGR-ALELFT-VMLREGVKPDEYCIGSLLSIMSSLSLGSQ- 457
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
+H+++LK + V SL Y+K G L S +F Q D +W +++
Sbjct: 458 ---VHSYILK-AGLVTNATVGCSLFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISGFV 513
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
+ +AL LF +M P+ +TL+++++AC++L L G H
Sbjct: 514 ------------EHGYPDQALRLFKEMLYQEVVPDHITLISILTACADLRLLRTGREIHG 561
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
R L N VG ALV+MYSKCG L+LA ++FD L +D F ++++
Sbjct: 562 STFRLGLGTNTVVGGALVNMYSKCGSLSLARKVFDILPHKDAFACSSLV 610
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 21/273 (7%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSK---LASTYALTIFSSIPNPTVFLYNTLISSFTS 83
QVH+ +L GL + L T+ SK L +Y +F + ++IS F
Sbjct: 457 QVHSYILKAGLVTNATVGCSLFTMYSKCGCLEESY--EVFQQAIVKDNVSWASMISGFVE 514
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPY 143
H A L+ +L ++ + P+ T S+ AC + G +H + L
Sbjct: 515 HGYPDQ-ALRLFKEML-YQEVVPDHITLISILTACADL-RLLRTGREIHGSTFR-LGLGT 570
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
+ V +L+N Y+K G L ++R +FD + D ++L+ L
Sbjct: 571 NTVVGGALVNMYSKCGSLSLARKVFDILPHKDAFACSSLVSGYAQN------------GL 618
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTA 263
E+ LF DM + + T+ +++ A S L G H Y+ + L+ + VG++
Sbjct: 619 IEESFLLFHDMLRNDETVDAFTITSILGAASLLCQSDIGTQLHAYIEKLGLQADVSVGSS 678
Query: 264 LVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L+ MYSKCG + + FD + D + ++I
Sbjct: 679 LLTMYSKCGSIEDCRKAFDDVEKPDLIGWTSLI 711
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 128/289 (44%), Gaps = 39/289 (13%)
Query: 20 HSLNTLKQVHAQMLTT-----GL-----ALHTYCLSHLLTISSKLASTYALTIFSSIPNP 69
H+ K +HA +L T G+ + YC S + ++ KL F +I P
Sbjct: 48 HNARNTKILHAHLLKTHYLQSGIFFMDSLIGLYCKSSDMVLAHKL--------FDTITQP 99
Query: 70 TVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGP 129
++ +N +IS + +S + + ++ R+ +P+ F++ S+ AC +G
Sbjct: 100 SIVSWNVMISGYVRNSMFLK-SLEMFCRMHLFG-FEPDEFSYGSVLSACVAL-QASMFGL 156
Query: 130 PLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
+ + V+K FL Y VQ +++ + K + F+ S ++A+WN ++
Sbjct: 157 QVFSLVVKNGFLSSGY---VQTQMVDMFCKNCNFSEALRFFNDASCDNVASWNAIISLAV 213
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
AL LF +M + PN T ++++AC L + G H
Sbjct: 214 KNGENQV------------ALNLFSEMCRASLMPNSYTFPSILTACCALKEMQIGKGVHG 261
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
++ + FV TA+VD+Y+K GC++ A + F Q+ ++ + A+I
Sbjct: 262 LAIKCG-ATDVFVETAIVDLYAKFGCMSEAYRQFSQMQVQNVVSWTAII 309
>Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465331
| 20130731
Length = 596
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 15/271 (5%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSKLASTYA-LTIFSSIPNPTVFLYNTLISSFTSHS 85
Q+HA ++ GL HL+ SK Y+ L IF P+ + ++++ISSF
Sbjct: 41 QLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQ-- 98
Query: 86 SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDH 145
+ + L Y R++ + + P+ FPS K+C G LH LK D
Sbjct: 99 NDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSC-GILSSLPVAKMLHCFALK-TAYHLDI 156
Query: 146 FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSL 205
FV +S+++ YAK G +C + +FD++ ++ +W+ L+ L + D SL
Sbjct: 157 FVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQ---------LGEDDESL 207
Query: 206 EALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALV 265
F ++ N+ TL +++ C L G H + + + FV ++L+
Sbjct: 208 RLFKRFL-VEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLI 266
Query: 266 DMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+YSKCG + A +F+++T R+ +NAM+
Sbjct: 267 SLYSKCGVVEEAYDVFEEVTVRNLGMWNAML 297
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 101 HKTLQPNSFTFPSLFKACCGS------GHWFQYGPPLHAHVLKF---LEPPYDHFVQASL 151
H+ P+SF L++ C + G LHAH++K P H L
Sbjct: 6 HQLQLPHSFNQQPLYRNLCNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHH----L 61
Query: 152 LNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLF 211
+NFY+K S +F TW++++ DL L +L F
Sbjct: 62 INFYSKTHLPYSSLQIFHDSPHKSATTWSSVISS------------FAQNDLPLLSLNYF 109
Query: 212 CDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKC 271
M P++ + +C L +L HC+ L+ L+ FVG++++DMY+KC
Sbjct: 110 RLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKC 169
Query: 272 GCLNLACQLFDQLTDRDTFCYNAMI 296
G + A +FD++ R+ ++ +I
Sbjct: 170 GDICYAHNVFDEMPYRNVVSWSGLI 194
>Medtr2g049310.1 | PPR containing plant-like protein | HC |
chr2:21732028-21729769 | 20130731
Length = 717
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 142/292 (48%), Gaps = 27/292 (9%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
+L+ + +SL K +H+ ++ + L + LL++ +KL S A +F +P
Sbjct: 223 LLRATVESNSLKIGKVLHSLVVASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMPEKD 282
Query: 71 VFLYNTLISSFTSHS---SQIHLAFSLYNRILAHKTLQPNSFT-FPSLFKACCGSGHWFQ 126
V ++N +IS ++ + L + + ++P+ FT P++ + +
Sbjct: 283 VVVWNIMISVYSGSGCPKESLELVYCM-----VRSGIRPDMFTAIPAI--SSITKLKSIE 335
Query: 127 YGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXX 186
+G LHA V++ Y V SL++ Y+ L +R +F I + + +W+ ++
Sbjct: 336 WGKQLHAQVIRN-GSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKDRTVVSWSAMIKGY 394
Query: 187 XXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTH 246
D LEAL LF +M++S + + V ++ ++ A + +GAL + H
Sbjct: 395 AMH------------DNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYLH 442
Query: 247 CYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTD--RDTFCYNAMI 296
Y L+ NL + + T+L++ Y+KCGC+ +A +LF++ +D +N+MI
Sbjct: 443 GYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMI 494
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 121/290 (41%), Gaps = 34/290 (11%)
Query: 15 LLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYAL--------TIFSSI 66
+L C L+Q+HA+ GL ++ ++SSKL +Y+ IFS
Sbjct: 27 ILNLCTKPQYLQQIHARFFLHGLHQNS-------SLSSKLIDSYSNFGLLHFSHKIFSFT 79
Query: 67 PNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQ 126
NP +YN + + F LY ++ K++ P+ S+ K+ H
Sbjct: 80 ENPDSIIYNAFLRNLFMFGEYEKTLF-LYKEMV-QKSMCPDEDCCFSVLKSLFYVFHEKG 137
Query: 127 YGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXX 186
H HV+K +D V +L+ Y L ++ S L WN L+
Sbjct: 138 LIMMAHGHVVKLGMDAFD-LVGNTLIELYG----FLNGNGLVERKSVTKLNFWNNLIYEA 192
Query: 187 XXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTH 246
++ +E+ LFC M+ +PN VTL+ L+ A +L G H
Sbjct: 193 Y------------ESGKIVESFELFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVLH 240
Query: 247 CYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
++ +NL V TAL+ MY+K L A +F+++ ++D +N MI
Sbjct: 241 SLVVASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMI 290
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 29/240 (12%)
Query: 11 PILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNP 69
P + + K S+ KQ+HAQ++ G + L+ + S A A IF I +
Sbjct: 323 PAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKDR 382
Query: 70 TVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKT---LQPNSFTFPSLFKACCGSGHWFQ 126
TV ++ +I + H + + A SL+ + T L P+ K G+ H+
Sbjct: 383 TVVSWSAMIKGYAMHDNCLE-ALSLFIEMKLSGTKVDLVIVINILPAFAK--IGALHYVG 439
Query: 127 YGPPLHAHVLKFLEPPYDHF--VQASLLNFYAKYGRLCVSRCLF--DQISEPDLATWNTL 182
Y LH + LK D ++ SLLN YAK G + ++R LF ++ S D+ WN++
Sbjct: 440 Y---LHGYSLK---TNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSM 493
Query: 183 LXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG 242
+ + L+ +++S +P+ VT + +++AC N G + +G
Sbjct: 494 ITAYSNHGEW------------FQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGLVDKG 541
>Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38663296-38660628 | 20130731
Length = 745
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 133/317 (41%), Gaps = 49/317 (15%)
Query: 15 LLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
L+Q C N++ KQ+H+ + T+G + + +HLL SK A+ +F +P
Sbjct: 78 LIQSCIPTNSVSLGKQLHSLIFTSGCSSDKFISNHLLNFYSKFGELNNAVKLFDRMPRRN 137
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKT--------------------------- 103
N +I ++ + I A +L++ +
Sbjct: 138 YMSCNIMIKAYLEMGN-IENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLLFSRMN 196
Query: 104 ---LQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGR 160
P+ ++F S+ + C F G +HA+V K ++ V SL + Y K G
Sbjct: 197 VLGFVPDEYSFGSVLRGCAHLRALF-VGEQVHAYVAK-CGFEFNSVVGCSLAHMYMKAGS 254
Query: 161 LCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRR 220
LC + + +L WNTL+ L +C M+M+ R
Sbjct: 255 LCNGERIIKWMPNCNLVAWNTLMAGKAQNRCFEG------------VLDHYCMMKMAGYR 302
Query: 221 PNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQL 280
P+++T V++IS+CS L L QG H +++ V ++LV MYSKCG L + +
Sbjct: 303 PDKITFVSVISSCSELATLCQGKQIHAEVIKAGASSVVSVISSLVSMYSKCGSLQDSIKA 362
Query: 281 FDQLTDRDTFCYNAMIG 297
F + +RD +++MI
Sbjct: 363 FLECEERDVVIWSSMIA 379
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 116/276 (42%), Gaps = 37/276 (13%)
Query: 15 LLQKCHSLNTL---KQVHAQMLTTGLALHTYC---LSHLLTISSKLASTYALTIFSSIPN 68
+L+ C L L +QVHA + G ++ L+H+ + L + I +PN
Sbjct: 210 VLRGCAHLRALFVGEQVHAYVAKCGFEFNSVVGCSLAHMYMKAGSLCN--GERIIKWMPN 267
Query: 69 PTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTL------QPNSFTFPSLFKACCGSG 122
+ +NTL++ + + +L H + +P+ TF S+ +C
Sbjct: 268 CNLVAWNTLMAGKAQNR--------CFEGVLDHYCMMKMAGYRPDKITFVSVISSCSELA 319
Query: 123 HWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTL 182
Q G +HA V+K V +SL++ Y+K G L S F + E D+ W+++
Sbjct: 320 TLCQ-GKQIHAEVIK-AGASSVVSVISSLVSMYSKCGSLQDSIKAFLECEERDVVIWSSM 377
Query: 183 LXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG 242
+ +A+ LF D + NEVT ++L+ ACS+ G +G
Sbjct: 378 IAAYGFHGQCE------------KAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKG 425
Query: 243 V-WTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLA 277
+ + + + LK T +VD+ + GCL A
Sbjct: 426 LDFFDMMVEKYGLKARLEHYTCVVDLLGRSGCLEEA 461
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 139/308 (45%), Gaps = 43/308 (13%)
Query: 28 VHAQMLTTGLALHTYCLSHLLTISSKL-ASTYALTIFSSIPNPTV---FLYNTLISSFTS 83
+H ++ G + + + ++++ K A +A +F + + +N+++S + S
Sbjct: 32 IHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVY-S 90
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLK--FLEP 141
H ++A SL+ + + P++ ++ C G G +H ++ +E
Sbjct: 91 HCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGL-CGRQVHGFCVRSGLVE- 148
Query: 142 PYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXL--- 198
D FV +L++ YAK G++ + +F+++ D+ TWN ++ L
Sbjct: 149 --DVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGK 206
Query: 199 --------------------EDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
EA+ +F M R RPN VTL++L+SAC+++GA
Sbjct: 207 MREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGA 266
Query: 239 LSQGVWTHCYLLR-------NNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL--TDRDT 289
L G THCY ++ N+ + V AL+DMY+KC L +A +FD++ DRD
Sbjct: 267 LLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDV 326
Query: 290 FCYNAMIG 297
+ MIG
Sbjct: 327 VTWTVMIG 334
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 20/201 (9%)
Query: 102 KTLQ--PNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYG 159
KTL P+ +TFP +FKAC G F+ G +H V++ L + FV ++++ Y K
Sbjct: 2 KTLHWTPDHYTFPFVFKAC-GEISNFELGASIHGCVIR-LGFESNVFVCNAVISMYGKCK 59
Query: 160 RLCVSRCLFDQISEP---DLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQM 216
+ +R +FD++ D TWN+++ A+ LF +M +
Sbjct: 60 AVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNV------------AVSLFREMTV 107
Query: 217 SRR-RPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLN 275
P+ V +V ++ C LG G H + +R+ L + FVG ALVDMY+KCG +
Sbjct: 108 GYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKME 167
Query: 276 LACQLFDQLTDRDTFCYNAMI 296
A ++F+++ +D +NAM+
Sbjct: 168 DANKVFERMRFKDVVTWNAMV 188
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 61/318 (19%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSH 84
+QVH + +GL + + L+ + +K A +F + V +N +++ + S
Sbjct: 135 RQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGY-SQ 193
Query: 85 SSQIHLAFSLYNRILAHKT----------------------------------LQPNSFT 110
+ + A SL+ ++ K +PN T
Sbjct: 194 NGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVT 253
Query: 111 FPSLFKACCGSGHWFQYGPPLHAHVLKFL------EPPYDHFVQASLLNFYAKYGRLCVS 164
SL AC G +G H + +KF+ + D V +L++ YAK L V+
Sbjct: 254 LMSLLSACASVGALL-HGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVA 312
Query: 165 RCLFDQI--SEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR--R 220
R +FD+I + D+ TW ++ DA+ AL LF +M
Sbjct: 313 RAMFDEICPKDRDVVTWTVMIGGYAQHG---------DAN---HALQLFSEMFKIDNCIV 360
Query: 221 PNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNR--FVGTALVDMYSKCGCLNLAC 278
PN+ T+ ++ +C+ L AL+ G H Y+LR +L + FV L+DMYSK G ++ A
Sbjct: 361 PNDFTISCVLMSCARLSALNFGKQIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQ 420
Query: 279 QLFDQLTDRDTFCYNAMI 296
+FD ++ R+ + +++
Sbjct: 421 VVFDSMSKRNAVSWTSLL 438
>Medtr4g006900.1 | PPR containing plant-like protein | HC |
chr4:850780-853131 | 20130731
Length = 688
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 121/277 (43%), Gaps = 26/277 (9%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT--VFLYNTLISSFTS 83
+ HA ++ GL + L+ + K A +F IP V ++ T++S F+
Sbjct: 238 KTHALLIKNGLVDSDILRTCLIDLYFKCGKVKLARRVFEEIPERERDVVVWGTMLSGFSH 297
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNS----FTFPSLFKACCGSGHWFQYGPPLHAHVLKFL 139
+ Q + Y + + + + PNS P + + C + G +HA VLK
Sbjct: 298 NRLQREVL--EYVKWMVEEGIYPNSVIMTIVLPVIGEVCKR-----RLGQEVHAFVLKTK 350
Query: 140 EPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLE 199
VQ++L++ Y K G L +R +F E ++ W L+ LE
Sbjct: 351 SYAEKVPVQSALIDMYCKCGDLSSARAVFYSSPERNVVCWTALMSGYASVGR------LE 404
Query: 200 DADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRF 259
+AL MQ RP+ VT+ ++ C+ L AL QG H Y L++ N
Sbjct: 405 ------QALRAVIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLPNVS 458
Query: 260 VGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ ++LV MYSKCG + + +LF + R+ + AMI
Sbjct: 459 LSSSLVVMYSKCGVVEYSTRLFGDMEQRNVISWTAMI 495
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 119/280 (42%), Gaps = 32/280 (11%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY--------ALTIFSSIPNPTVFLYNTL 77
++VHA L T + + + S L Y A +F S P V + L
Sbjct: 340 QEVHA------FVLKTKSYAEKVPVQSALIDMYCKCGDLSSARAVFYSSPERNVVCWTAL 393
Query: 78 ISSFTSHSSQIHLAFSLYNRI-LAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVL 136
+S + S L +L I + + +P+ T ++ C + G +HA+ L
Sbjct: 394 MSGYASVG---RLEQALRAVIWMQQEGFRPDVVTVATVL-PICAQLRALEQGKQIHAYAL 449
Query: 137 KFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXX 196
K P + + +SL+ Y+K G + S LF + + ++ +W ++
Sbjct: 450 KHWFLP-NVSLSSSLVVMYSKCGVVEYSTRLFGDMEQRNVISWTAMIDSY---------- 498
Query: 197 XLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKL 256
+E+ L EAL + MQ+S+ RP+ V + ++S C L L G H +L+ +
Sbjct: 499 -IENGHL-YEALGVIRSMQLSKHRPDSVAMSRMLSVCGELKLLKHGKEIHGQILKRDFTS 556
Query: 257 NRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
FV L++MY G ++ A +F + + + + A+I
Sbjct: 557 VHFVSAELINMYGALGDVDKANLVFSAVPVKGSMTWTALI 596
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 15/194 (7%)
Query: 107 NSFTFPSLFKACCGSGHWFQYGPPLHAHV-LKFLEPPYDHFVQASLLNFYAKYGRLCVSR 165
N+ TF SL AC + G +H H+ + LE + F+ L+ Y G L +
Sbjct: 110 NATTFSSLIAACIRTNS-LSIGKQIHTHIRINGLEK--NTFLLTKLVQMYTSCGSLEDAL 166
Query: 166 CLFDQI-SEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEV 224
LFD++ E + WN LL ++ + + M+ N
Sbjct: 167 KLFDELPDESSVYPWNALLRGTVVFGGRKKQY--------IDVVKTYSKMRELGVELNVY 218
Query: 225 TLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
+ ++I + + A QG+ TH L++N L + + T L+D+Y KCG + LA ++F+++
Sbjct: 219 SFSSVIKSFAAAPAFYQGLKTHALLIKNGLVDSDILRTCLIDLYFKCGKVKLARRVFEEI 278
Query: 285 --TDRDTFCYNAMI 296
+RD + M+
Sbjct: 279 PERERDVVVWGTML 292
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 111/280 (39%), Gaps = 28/280 (10%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPT 70
+L + + +L KQ+HA L + S L+ + SK Y+ +F +
Sbjct: 428 VLPICAQLRALEQGKQIHAYALKHWFLPNVSLSSSLVVMYSKCGVVEYSTRLFGDMEQRN 487
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQ-----PNSFTFPSLFKACCGSGHWF 125
V + +I S+ + LY + +++Q P+S + + CG
Sbjct: 488 VISWTAMIDSYIENGH-------LYEALGVIRSMQLSKHRPDSVAMSRML-SVCGELKLL 539
Query: 126 QYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXX 185
++G +H +LK + HFV A L+N Y G + + +F + TW L+
Sbjct: 540 KHGKEIHGQILK-RDFTSVHFVSAELINMYGALGDVDKANLVFSAVPVKGSMTWTALIRA 598
Query: 186 XXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWT 245
E +L A+ LF M+ R PN T ++S C G ++
Sbjct: 599 Y------------EYNELYQGAIDLFDQMRSDRFSPNPFTFEVILSVCERAGFVNDASKI 646
Query: 246 HCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLT 285
+ + ++ ++ +V + ++ G L A Q F Q++
Sbjct: 647 FNLMPKYKIEASKEHFAIMVRLLTRYGQLEKA-QRFAQMS 685
>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50487581-50485585 | 20130731
Length = 630
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 129/289 (44%), Gaps = 23/289 (7%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPT 70
IL+L K S + HAQ + G + L+ + SK + + A +F +P +
Sbjct: 62 ILQLCAKSRSSIAGRACHAQFILVGFETDILTSNMLINMYSKCSLVHDARIVFDEMPVKS 121
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC---CGSGHWFQY 127
V +NT+I + T + + A L+ ++L TL N FT S+ C C Q
Sbjct: 122 VVSWNTMIGALTRIAKE-QEALMLFIQMLREGTL-FNEFTISSVLCECAFKCAILECMQ- 178
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
LHA +K + + FV +LL+ YAK + + +F+ + E + TW+++L
Sbjct: 179 ---LHAFSIK-VSVDSNCFVGTALLHVYAKCSSIKDASKMFESMPETNAVTWSSILAGYV 234
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
L AL LF D Q+ + + + + AC+ L L +G H
Sbjct: 235 QN------------GLHEAALLLFRDYQLMGFEQDAFLISSAVCACAGLATLIEGKQVHA 282
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
++ N +V ++L+DMY+KCGC+ A +F R +NAMI
Sbjct: 283 ISCKSGFGSNIYVTSSLIDMYAKCGCIREAYIVFQGEELRSIVLWNAMI 331
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 122/271 (45%), Gaps = 23/271 (8%)
Query: 18 KCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNT 76
KC L + Q+HA + + + + + LL + +K +S A +F S+P +++
Sbjct: 170 KCAILECM-QLHAFSIKVSVDSNCFVGTALLHVYAKCSSIKDASKMFESMPETNAVTWSS 228
Query: 77 LISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVL 136
+++ + + +H A L R + ++F S AC G + G +HA
Sbjct: 229 ILAGYVQNG--LHEAALLLFRDYQLMGFEQDAFLISSAVCACAGLATLIE-GKQVHAISC 285
Query: 137 K--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXX 194
K F Y V +SL++ YAK G + + +F + WN ++
Sbjct: 286 KSGFGSNIY---VTSSLIDMYAKCGCIREAYIVFQGEELRSIVLWNAMISGFGRHA---- 338
Query: 195 XXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRN-N 253
+LEA+ LF MQ P++VT V++++ACS++G QG ++R N
Sbjct: 339 --------CALEAMILFEKMQQRGLFPDDVTYVSVLNACSHMGLHEQGHKYFDLMVREHN 390
Query: 254 LKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
L+ + + +VD+ + G ++ A L +++
Sbjct: 391 LRPSVLHYSCMVDILGRAGLVHKAYDLIERM 421
>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:3995998-3993764 | 20130731
Length = 637
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 22/193 (11%)
Query: 126 QYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXX 185
+ G +H V+KF +D A L+N Y K+G + +R +F+ I + +W+ L
Sbjct: 140 KVGSQMHVGVVKFGFVKFDKVCNA-LMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEG 198
Query: 186 XXXXXXXXXXXXLEDA-------------------DLSLEALYLFCDMQMS-RRRPNEVT 225
L D + EA L +M R + VT
Sbjct: 199 LVKWESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVT 258
Query: 226 LVALISACSNLGALSQGVWTHCYLLRN-NLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
L +++SACS G + G W HCY ++ L VGT+LVDMY+KCG +N A +F +
Sbjct: 259 LCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSM 318
Query: 285 TDRDTFCYNAMIG 297
R+ +NAM+G
Sbjct: 319 LKRNVVAWNAMLG 331
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 137/296 (46%), Gaps = 29/296 (9%)
Query: 14 KLLQKC---HSLNTLKQVHAQMLTTGLALHT--YCLSHLLTISSKLASTYALTIF--SSI 66
+LLQ C L+ Q+HA ++ G + T + S L+ + +K T F + +
Sbjct: 108 ELLQGCVYARDLSLGLQIHAHLIKKGSSYSTNEFVESKLVILYAKCNLTRVAVHFFRNVV 167
Query: 67 PNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQ 126
N +F Y ++ + + A Y ++ K P++F P+ KAC G W
Sbjct: 168 KNQNLFSYAAIVG-LQARNGLYKEALLSYVEMM-EKGFCPDNFVVPNGLKAC-GGLRWIG 224
Query: 127 YGPPLHAHVLKFLEPPYDH--FVQASLLNFYAKYGRLCVSRCLFDQI--SEPDLATWNTL 182
+G +H V+K + +D +V SL++ Y K G L + +FD++ + + WN++
Sbjct: 225 FGRGIHGFVVK-MGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSM 283
Query: 183 LXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR-RPNEVTLVALISACSNLGALSQ 241
+ +++EA+ LF M+ P+EV+L SAC+NL A+ +
Sbjct: 284 IVGYV------------QNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEE 331
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTD-RDTFCYNAMI 296
G H ++ +LN +G+++++ YSK G + +F + +D +N MI
Sbjct: 332 GKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMI 387
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 16/151 (10%)
Query: 150 SLLNFYAKYGRLCVSRCLFDQIS----EPDLATWNTLLXXXXXXXXXXXXXXLEDADLSL 205
SL+ + + G++ ++ +F ++ P+L TW T++ L L
Sbjct: 523 SLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISG------------LAQNGLGY 570
Query: 206 EALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALV 265
EA +F MQ + RPN +++ + +SAC+N+ L+ G H Y++RN + + + T+++
Sbjct: 571 EASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGRSIHGYVMRNFMSFSLQITTSII 630
Query: 266 DMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
DMY+KCG L+ A +F + ++ YNAMI
Sbjct: 631 DMYAKCGNLDDAKFVFIICSTKELPVYNAMI 661
>Medtr8g031210.2 | PPR containing plant-like protein | HC |
chr8:11676602-11671244 | 20130731
Length = 611
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 134/275 (48%), Gaps = 21/275 (7%)
Query: 26 KQVHAQMLTTGLALHTYCLSH-LLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTS 83
+ VH + GL + CL++ LL + K S A +F + + + ++T+ + +
Sbjct: 137 RSVHGFVKRKGLD-NKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYAD 195
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC-CGSGHWFQYGPPLHAHVLKFLEPP 142
+ ++ + L+ +L K ++PN T S+ +AC C S + G +H + +
Sbjct: 196 NGAETDV-LDLFIEML-DKRIKPNWVTVVSVLRACACISN--LEEGMKIHELAVNY-GFE 250
Query: 143 YDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDAD 202
+ V +L++ Y K + F+++ + D+ W L D
Sbjct: 251 METTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYA------------DNG 298
Query: 203 LSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGT 262
+ E++++F +M S RP+ + LV +++ S LG L Q V H ++++N + N+F+G
Sbjct: 299 MVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGA 358
Query: 263 ALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+L+++Y+KC + A ++F +T +D ++++I
Sbjct: 359 SLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIA 393
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 15/192 (7%)
Query: 105 QPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVS 164
+P++++ K+C G G +H LK + D FV ++L++ Y K G++ +
Sbjct: 12 KPDNYSVSIALKSCAGLRKLL-LGKMIHG-FLKKVRIDNDMFVGSALIDLYTKCGQMNDA 69
Query: 165 RCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR-RPNE 223
+F + +PD+ W +++ E + AL F M +S + P+
Sbjct: 70 VEVFMEYPKPDVVLWTSIVSGY------------EQSGSPELALAFFSRMVVSEKVSPDP 117
Query: 224 VTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQ 283
VTLV++ SAC+ L G H ++ R L + +L+ +Y K G + A LF +
Sbjct: 118 VTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFRE 177
Query: 284 LTDRDTFCYNAM 295
++D+D ++ M
Sbjct: 178 MSDKDIISWSTM 189
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 124/279 (44%), Gaps = 22/279 (7%)
Query: 12 ILKLLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSK-LASTYALTIFSSIP 67
++ +L+ C ++ L++ +H + G + T + L+ + K + A+ F+ +P
Sbjct: 221 VVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP 280
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
V + L S + + +H + ++ +L+ T +P++ + G Q
Sbjct: 281 KKDVIAWAVLFSGYADNG-MVHESMWVFRNMLSSGT-RPDAIALVKILTTVSELG-ILQQ 337
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
HA V+K + F+ ASL+ YAK + + +F ++ D+ TW++++
Sbjct: 338 AVCFHAFVIKN-GFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYG 396
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACSNLGALSQGVWTH 246
EAL F M S +PN VT ++++SACS+ G + +G+
Sbjct: 397 FHGQGE------------EALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMF 444
Query: 247 CYLL-RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
++ + LK N +VD+ + G L++A L + +
Sbjct: 445 DIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNM 483
>Medtr1g040000.1 | PPR containing plant-like protein | HC |
chr1:14632880-14635263 | 20130731
Length = 526
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 144/315 (45%), Gaps = 55/315 (17%)
Query: 19 CHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFS---SIPNPTVFLY 74
C +L L+Q H +L L + LS + ++ L +Y+ +IF+ + P P +F+Y
Sbjct: 23 CTTLTHLQQTHTFILKHALFQNDINLSRFIHKTASLNYPSYSYSIFTFNHNRPFP-IFVY 81
Query: 75 NTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKA--CCGSGHWFQYGPPLH 132
N +I + +SS LA S++ R + L +S++ P + K+ C F G +H
Sbjct: 82 NNII--YALYSSNAKLAVSIF-RSVRRLGLSFDSYSLPYVLKSVVCLND---FGLGKQIH 135
Query: 133 -AHVLKFLEPP----------------------YDHF-----VQASLLNFYAKYGRLCVS 164
V+ L+ +D F V +++ Y K G + +
Sbjct: 136 CVGVVTGLDKNVSVCSSLIQMYSCYDVCSARKLFDEFGGNGCVLNAMIVAYVKVGDVSNA 195
Query: 165 RCLFDQISE--PDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPN 222
R LFD + E D+ +W ++ A EA+ LF MQ+ +P+
Sbjct: 196 RKLFDSMLERDKDVFSWTAMISGYT------------QAHNPNEAIKLFRRMQLENVKPD 243
Query: 223 EVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFD 282
E+ ++A++SAC++LGAL G W H Y+ ++ L + +L+DMY+K G + A +LF+
Sbjct: 244 EIAILAVLSACADLGALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFE 303
Query: 283 QLTDRDTFCYNAMIG 297
+ + + MI
Sbjct: 304 NMKHKTIITWTTMIA 318
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 59 ALTIFSSI--PNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFK 116
A +F S+ + VF + +IS +T + + A L+ R + + ++P+ ++
Sbjct: 195 ARKLFDSMLERDKDVFSWTAMISGYT-QAHNPNEAIKLFRR-MQLENVKPDEIAILAVLS 252
Query: 117 ACCGSGHWFQYGPPLH----AHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQIS 172
AC G G +H H L + P Y+ SL++ YAK G + + LF+ +
Sbjct: 253 ACADLGA-LHLGEWIHNYIEKHKLSKIVPLYN-----SLIDMYAKSGNIRKALELFENMK 306
Query: 173 EPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLF-CDMQMSRRRPNEVTLVALIS 231
+ TW T++ L L EAL +F C + R +PNEVT +A++S
Sbjct: 307 HKTIITWTTMIAG------------LALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILS 354
Query: 232 ACSNLGALSQG 242
ACS++G + G
Sbjct: 355 ACSHVGLVELG 365
>Medtr7g082690.1 | PPR containing plant-like protein | HC |
chr7:31706993-31708834 | 20130731
Length = 503
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 128/291 (43%), Gaps = 33/291 (11%)
Query: 16 LQKC---HSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTV 71
LQ C ++ Q+++ ++ +GL + + L+ LT + T AL IF + P
Sbjct: 66 LQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDT 125
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPL 131
+NT++ + SS+ ++ R + + ++P+ FTF S + G +
Sbjct: 126 VTWNTMMGGYLEFSSE---QIPVFWRYMNREGVKPDEFTFASALTGLATISS-LKMGMQV 181
Query: 132 HAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXX 191
HA +++ D V SL++ Y K +L FD+I D+ +W +
Sbjct: 182 HAQLVRSGYGD-DICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQM--------- 231
Query: 192 XXXXXXLEDADLSLE------ALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWT 245
AD L+ AL + M+ +PN+ TL ++AC+ L ++ +G
Sbjct: 232 ---------ADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQF 282
Query: 246 HCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H ++ ++ V AL+DMY+KCGC++ A +F R + MI
Sbjct: 283 HGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMI 333
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 105/240 (43%), Gaps = 18/240 (7%)
Query: 57 TYALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFK 116
T AL +F +P V ++++++ H+ A SL++ + ++PN FTF S +
Sbjct: 9 TSALQLFDEMPERNVVSWSSVMTGCV-HNGGASDALSLFSCMHREGFVKPNEFTFVSALQ 67
Query: 117 ACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDL 176
AC S + Q V LE + F+ + L + G+L + +F+ D
Sbjct: 68 ACSLSENVTQAYQIYSLVVRSGLE--CNVFLLNAFLTALVRNGKLTEALQIFETSPIRDT 125
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCD-MQMSRRRPNEVTLVALISACSN 235
TWNT++ + S E + +F M +P+E T + ++ +
Sbjct: 126 VTWNTMMGGYL--------------EFSSEQIPVFWRYMNREGVKPDEFTFASALTGLAT 171
Query: 236 LGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAM 295
+ +L G+ H L+R+ + VG +LVDMY K L + FD++ +D + M
Sbjct: 172 ISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQM 231
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 154 FYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLF-C 212
Y K L + LFD++ E ++ +W++++ +AL LF C
Sbjct: 1 MYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGAS------------DALSLFSC 48
Query: 213 DMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCG 272
+ +PNE T V+ + ACS ++Q + ++R+ L+ N F+ A + + G
Sbjct: 49 MHREGFVKPNEFTFVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNG 108
Query: 273 CLNLACQLFDQLTDRDTFCYNAMIG 297
L A Q+F+ RDT +N M+G
Sbjct: 109 KLTEALQIFETSPIRDTVTWNTMMG 133
>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37579244-37581349 | 20130731
Length = 701
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 19/197 (9%)
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
C + F L +H+ L P D F+ LL+ YAK G++ ++ LFD++S+ D+ +
Sbjct: 40 CAQSNDFNQAKRLQSHMELQLFQPTDSFIHNQLLHLYAKCGKISDAQQLFDKMSKRDIYS 99
Query: 179 WNTLLXXXXXXXXXXXXXXLEDAD-------------------LSLEALYLFCDMQMSRR 219
WN LL + D LS +AL F MQ
Sbjct: 100 WNALLSAYAKVGLVEDLNLVFDRMACRDSVSYNTMIACFASNWLSGKALRFFVRMQEDGF 159
Query: 220 RPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQ 279
RP + + V + ACS L G H ++ + N FV A+ D+Y+KCG ++ A
Sbjct: 160 RPTQYSYVNALQACSQLLDFRLGKQIHGRVVVGEFEKNVFVWNAVTDLYAKCGDIDRARW 219
Query: 280 LFDQLTDRDTFCYNAMI 296
LFD + +++ +N MI
Sbjct: 220 LFDGMVNKNLVSWNLMI 236
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 136 LKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXX 195
L L+P D +S+LN Y + GR+ +R +FD+I + D W T++
Sbjct: 257 LSGLKP--DQVTVSSVLNAYFQSGRVDDARNMFDKIDKKDEICWTTMIVGYAQ------- 307
Query: 196 XXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLK 255
+ +AL LF +M RP+ T+ ++S+C+ L +L G H ++ +
Sbjct: 308 -----SGREEDALMLFSEMLRGNVRPDSHTISTVVSSCAKLASLYHGQAVHGKVILMGVD 362
Query: 256 LNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
N V +ALVDMY KCG A +F+ + ++ +N+MI
Sbjct: 363 SNMLVSSALVDMYCKCGVPLDARVIFETMPIKNVIIWNSMI 403
>Medtr3g011920.1 | PPR containing plant-like protein | HC |
chr3:3106602-3104668 | 20130731
Length = 627
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 46/277 (16%)
Query: 51 SSKLASTYALTIFSSIPNP-TVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSF 109
S + A +F +P TV L +I+SF+ S A L++R+LA T++PN F
Sbjct: 104 SDSITFDVACNMFDEMPELLTVGLVTEIITSFSKQSRH-EDAIYLFSRMLA-STIRPNEF 161
Query: 110 TFPSLFKACCGSGHWFQYGPPLHAHVLK-----------------------------FLE 140
TF ++ G G +H +K F +
Sbjct: 162 TFGTVLNTSTRLGK-VGVGKQIHGCAIKTSLCSNVFVGSALVDLYVKLSSIEEAQKAFED 220
Query: 141 PPYDHFVQ-ASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLE 199
Y + V +L+ Y K GR + +F+++ E ++ +WN ++
Sbjct: 221 TEYPNVVSYTTLIGGYLKSGRFEDALRVFNEMPERNVISWNAMVGGCSKIGH-------- 272
Query: 200 DADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRF 259
+ EA+ F DM PNE T ISA SN+ +L G H ++ KLN F
Sbjct: 273 ----NEEAVKFFIDMLREGFIPNESTFPCAISAASNIASLGFGRSFHACAIKFLGKLNDF 328
Query: 260 VGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
VG +L+ Y+KCG + + +FD++ R+ +NA+I
Sbjct: 329 VGNSLISFYAKCGSMKDSLLIFDKICKRNVVSWNAVI 365
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 103/262 (39%), Gaps = 46/262 (17%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
+L + + KQ+H + T L + + S L+ + KL+S A F P
Sbjct: 166 VLNTSTRLGKVGVGKQIHGCAIKTSLCSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPN 225
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQ------------------------- 105
V Y TLI + S + A ++N + +
Sbjct: 226 VVSYTTLIGGYLK-SGRFEDALRVFNEMPERNVISWNAMVGGCSKIGHNEEAVKFFIDML 284
Query: 106 -----PNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGR 160
PN TFP A +G HA +KFL D FV SL++FYAK G
Sbjct: 285 REGFIPNESTFPCAISAASNIAS-LGFGRSFHACAIKFLGKLND-FVGNSLISFYAKCGS 342
Query: 161 LCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRR 220
+ S +FD+I + ++ +WN ++ EA+ LF M +
Sbjct: 343 MKDSLLIFDKICKRNVVSWNAVICGYAHNGR------------GAEAISLFERMCSEGIK 390
Query: 221 PNEVTLVALISACSNLGALSQG 242
PN+V+L+ L+ AC++ G + +G
Sbjct: 391 PNKVSLLGLLLACNHAGLVDEG 412
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%)
Query: 206 EALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALV 265
+A+YLF M S RPNE T +++ + LG + G H ++ +L N FVG+ALV
Sbjct: 143 DAIYLFSRMLASTIRPNEFTFGTVLNTSTRLGKVGVGKQIHGCAIKTSLCSNVFVGSALV 202
Query: 266 DMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
D+Y K + A + F+ + Y +IG
Sbjct: 203 DLYVKLSSIEEAQKAFEDTEYPNVVSYTTLIG 234
>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:13795126-13792268 | 20130731
Length = 952
Score = 83.6 bits (205), Expect = 2e-16, Method: Composition-based stats.
Identities = 79/320 (24%), Positives = 143/320 (44%), Gaps = 36/320 (11%)
Query: 5 NPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSK-LASTYALTIF 63
+P+ IL + L + K +H + G+ + + L+ + + L A T+F
Sbjct: 342 DPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVF 401
Query: 64 SSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
+P+ V +N+L S + + +++ R + ++P+ T S+ AC
Sbjct: 402 DLMPHRNVVTWNSLSSCYVNCGFP-QKGLNVF-REMVLNGVKPDLVTMLSILHACSDLQD 459
Query: 124 WFQYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCV--SRCLFDQISEPDLATW 179
+ G +H ++ +E D FV +LL+ YAK +CV ++ +FD I ++A+W
Sbjct: 460 -LKSGKVIHGFAVRHGMVE---DVFVCNALLSLYAKC--VCVREAQVVFDLIPHREVASW 513
Query: 180 NTLLXXXXXXXXXXXXXXL-----------EDADLSL------------EALYLFCDMQM 216
N +L + ++ S+ EA+ +F MQ
Sbjct: 514 NGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQT 573
Query: 217 SRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNL 276
+P+E T+ +++ ACS L G HCY+ R+ + ALVDMY+KCG L+L
Sbjct: 574 MGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSL 633
Query: 277 ACQLFDQLTDRDTFCYNAMI 296
+ +FD + +D F +N MI
Sbjct: 634 SRNVFDMMPIKDVFSWNTMI 653
Score = 80.1 bits (196), Expect = 2e-15, Method: Composition-based stats.
Identities = 69/282 (24%), Positives = 133/282 (47%), Gaps = 36/282 (12%)
Query: 31 QMLTTGLALHTYCLSHLLT----ISSKLASTY--------ALTIFSSIPNPTVFLYNTLI 78
Q L +G A+H + L H + +S+ L + Y A +F +P+ V +N+L
Sbjct: 256 QDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLA 315
Query: 79 SSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLK- 137
S + + +++ R + ++P+ S+ AC + G +H +K
Sbjct: 316 SCYVNCGFP-QKGLNVF-REMGLNGVKPDPMAMSSILPACSQLKD-LKSGKTIHGFAVKH 372
Query: 138 -FLEPPYDHFVQASLLNFYAKYGRLCV--SRCLFDQISEPDLATWNTLLXXXXXXXXXXX 194
+E D FV +L+N YA LCV ++ +FD + ++ TWN+L
Sbjct: 373 GMVE---DVFVCTALVNLYANC--LCVREAQTVFDLMPHRNVVTWNSL------------ 415
Query: 195 XXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNL 254
+ + L +F +M ++ +P+ VT+++++ ACS+L L G H + +R+ +
Sbjct: 416 SSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGM 475
Query: 255 KLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ FV AL+ +Y+KC C+ A +FD + R+ +N ++
Sbjct: 476 VEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGIL 517
Score = 79.3 bits (194), Expect = 4e-15, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 22/203 (10%)
Query: 97 RILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLK--FLEPPYDHFVQASLLNF 154
R + ++ N T S+ C + G +H V++ +E D FV ++ +NF
Sbjct: 130 RKMGLNKVKANPLTVSSILPGCSDLQD-LKSGKEIHGFVVRHGMVE---DVFVSSAFVNF 185
Query: 155 YAKYGRLCV--SRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFC 212
YAK LCV ++ +FD + D+ TWN+L + + L +F
Sbjct: 186 YAKC--LCVREAQTVFDLMPHRDVVTWNSL------------SSCYVNCGFPQKGLNVFR 231
Query: 213 DMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCG 272
+M + +P+ VT+ ++SACS+L L G H + L++ + N FV ALV++Y C
Sbjct: 232 EMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCL 291
Query: 273 CLNLACQLFDQLTDRDTFCYNAM 295
C+ A +FD + R+ +N++
Sbjct: 292 CVREAQAVFDLMPHRNVITWNSL 314
Score = 77.0 bits (188), Expect = 2e-14, Method: Composition-based stats.
Identities = 68/296 (22%), Positives = 135/296 (45%), Gaps = 25/296 (8%)
Query: 5 NPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSK-LASTYALTIF 63
NP+ IL L + K++H ++ G+ + S + +K L A T+F
Sbjct: 140 NPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVF 199
Query: 64 SSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
+P+ V +N+L S + + +++ R + ++P+ T + AC
Sbjct: 200 DLMPHRDVVTWNSLSSCYVNCGFP-QKGLNVF-REMVLDGVKPDPVTVSCILSACSDLQD 257
Query: 124 WFQYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCV--SRCLFDQISEPDLATW 179
+ G +H LK +E + FV +L+N Y LCV ++ +FD + ++ TW
Sbjct: 258 -LKSGKAIHGFALKHGMVE---NVFVSNALVNLYESC--LCVREAQAVFDLMPHRNVITW 311
Query: 180 NTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGAL 239
N+L + + L +F +M ++ +P+ + + +++ ACS L L
Sbjct: 312 NSLASCYV------------NCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDL 359
Query: 240 SQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAM 295
G H + +++ + + FV TALV++Y+ C C+ A +FD + R+ +N++
Sbjct: 360 KSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSL 415
Score = 70.9 bits (172), Expect = 1e-12, Method: Composition-based stats.
Identities = 71/307 (23%), Positives = 132/307 (42%), Gaps = 58/307 (18%)
Query: 12 ILKLLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIP 67
+L +L C L LK +H + G+ + + LL++ +K A +F IP
Sbjct: 447 MLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIP 506
Query: 68 NPTVFLYNTLISSFTSH----------------------------------SSQIHLAFS 93
+ V +N +++++ ++ +S+I A
Sbjct: 507 HREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAME 566
Query: 94 LYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLN 153
++ R + +P+ T S+ +AC S + G +H +V + + +D +L++
Sbjct: 567 IF-RKMQTMGFKPDETTIYSILRACSLS-ECLRMGKEIHCYVFRHWKD-WDLARTNALVD 623
Query: 154 FYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCD 213
YAK G L +SR +FD + D+ +WNT++ EAL LF
Sbjct: 624 MYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGN------------GKEALSLFEK 671
Query: 214 MQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNL---KLNRFVGTALVDMYSK 270
M +S +P+ T ++SACS+ + +GV + R++L + + T +VD+YS+
Sbjct: 672 MLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHY--TCVVDIYSR 729
Query: 271 CGCLNLA 277
GCL A
Sbjct: 730 AGCLEEA 736
Score = 65.1 bits (157), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 15/145 (10%)
Query: 154 FYAKYGRL-CV--SRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYL 210
F YG+ CV +R +FD + D+ TWN+L + + L +
Sbjct: 81 FIHAYGKCKCVEGARRVFDDLVARDVVTWNSL------------SACYVNCGFPQQGLNV 128
Query: 211 FCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSK 270
F M +++ + N +T+ +++ CS+L L G H +++R+ + + FV +A V+ Y+K
Sbjct: 129 FRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAK 188
Query: 271 CGCLNLACQLFDQLTDRDTFCYNAM 295
C C+ A +FD + RD +N++
Sbjct: 189 CLCVREAQTVFDLMPHRDVVTWNSL 213
>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3530268-3532784 | 20130731
Length = 696
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 124/281 (44%), Gaps = 17/281 (6%)
Query: 18 KCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFSSIPNPTVFLYNT 76
+ S+ +K+V M +G L Y ++ +L + + A T F +P + T
Sbjct: 135 RLRSIIGVKRVFNYMKNSGFELDLYMMNRVLFMHVQCNLMRDARTWFDDMPERDSSSWMT 194
Query: 77 LISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVL 136
+I S AF L+ + + S TF ++ +A + G +H +L
Sbjct: 195 MIGGLVD-SRNYSEAFELF-LCMWEEFNNGKSRTFAAMVRAS-ARLDCIEVGRQIHTCIL 251
Query: 137 KFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXX 196
K D FV +L++ Y+K G + +RC+FDQ+ + WNT++
Sbjct: 252 K-RAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMPQKTTVGWNTIIAGYAFR------- 303
Query: 197 XLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKL 256
S EAL ++ M+ S + + T+ +I+ C+ L +L G H L+R
Sbjct: 304 -----GFSEEALGIYYKMRDSGTKIDHFTISIVITICARLASLEHGKQGHAALVRRGFGT 358
Query: 257 NRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+ +ALV+ YSK G + A +FD++ ++ +NA+I
Sbjct: 359 DLVANSALVNFYSKWGRMENARHVFDKMHRKNIISWNALIA 399
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 22/222 (9%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLIS--SFT 82
+Q+H +L + + L+ + SK + A +F +P T +NT+I+ +F
Sbjct: 244 RQIHTCILKRAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMPQKTTVGWNTIIAGYAFR 303
Query: 83 SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPP 142
S + A +Y ++ T + + FT S+ C ++G HA +++
Sbjct: 304 GFSEE---ALGIYYKMRDSGT-KIDHFTI-SIVITICARLASLEHGKQGHAALVR-RGFG 357
Query: 143 YDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDAD 202
D ++L+NFY+K+GR+ +R +FD++ ++ +WN L+
Sbjct: 358 TDLVANSALVNFYSKWGRMENARHVFDKMHRKNIISWNALIAGYGHHGRGE--------- 408
Query: 203 LSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVW 244
EA+ +F M PN VT +A++SACS G LS+ W
Sbjct: 409 ---EAIEMFEKMLQENMTPNHVTFLAVLSACSYSG-LSERGW 446
>Medtr8g065040.1 | PPR containing plant-like protein | HC |
chr8:27316294-27314321 | 20130731
Length = 657
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 106/239 (44%), Gaps = 17/239 (7%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
AL +F ++ YN LISS + AF LY+ + ++ ++ + TF S+ C
Sbjct: 56 ALDLFHNMQIRDTVTYNLLISSSCLPPKK---AFQLYSEMGLYR-IRETATTFASVVALC 111
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
+G + + G +H+ V+KF + FV +L+ FY G V+ LFD++SE +L
Sbjct: 112 TNNG-FCREGSQVHSRVVKF-GFLNNVFVGGALVGFYMNLGLSGVALKLFDELSERNLGV 169
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
WN + E L + M N VT L+ CS+
Sbjct: 170 WNVMFRGFCEMGCVEVE----------ELLGFYARMCFEGVEANGVTFCYLLRGCSSKRR 219
Query: 239 LSQGVWTH-CYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+G H C L ++ N FV ALVD YS CGC A + F+ + D +N+M+
Sbjct: 220 FHEGEMIHSCVLKMGFVEYNVFVANALVDFYSSCGCFVSARKCFEGIKVEDVISWNSMV 278
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 126/291 (43%), Gaps = 26/291 (8%)
Query: 15 LLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLT--ISSKLASTYALTIFSSIPNP 69
LL+ C S + +H+ +L G + +++ L SS A F I
Sbjct: 210 LLRGCSSKRRFHEGEMIHSCVLKMGFVEYNVFVANALVDFYSSCGCFVSARKCFEGIKVE 269
Query: 70 TVFLYNTLISSFTSHSSQIHLAFSLYN--RILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
V +N+++S + + ++ ++ A +N ++ H+ P+ +F F C
Sbjct: 270 DVISWNSMVSVY-ADNNLVNDALEFFNFMQMWGHR---PSVRSFIG-FLNLCSRNKEIGL 324
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G +H V+KF +VQ++L++ Y K + S +F+ + + L N+L+
Sbjct: 325 GKQIHCCVMKFGFDERSVYVQSALIDMYGKCLDIQSSVNVFEWLPKMTLECCNSLMTS-- 382
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISA--CSNLGALSQGVWT 245
L + + LF M P+EVT+ + A S + +
Sbjct: 383 ----------LSHCGCVEDVVELFGLMVDEGLMPDEVTVSTTLKALSVSASASFTSSQSL 432
Query: 246 HCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
HC+ L++ ++ + V +L+D YS+CG L+ ++F+ + + C+ +MI
Sbjct: 433 HCFALKSGVEGDTTVLCSLMDAYSRCGHWELSHRIFETIPTPNAICFTSMI 483
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 18/233 (7%)
Query: 13 LKLLQKCHSLNTLKQVHAQMLTTGLALHT-YCLSHLLTISSK-LASTYALTIFSSIPNPT 70
L L + + KQ+H ++ G + Y S L+ + K L ++ +F +P T
Sbjct: 313 LNLCSRNKEIGLGKQIHCCVMKFGFDERSVYVQSALIDMYGKCLDIQSSVNVFEWLPKMT 372
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHW-FQYGP 129
+ N+L++S SH + L+ ++ + L P+ T + KA S F
Sbjct: 373 LECCNSLMTSL-SHCGCVEDVVELFG-LMVDEGLMPDEVTVSTTLKALSVSASASFTSSQ 430
Query: 130 PLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXX 189
LH LK D V SL++ Y++ G +S +F+ I P+ + +++
Sbjct: 431 SLHCFALKS-GVEGDTTVLCSLMDAYSRCGHWELSHRIFETIPTPNAICFTSMINGYARN 489
Query: 190 XXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG 242
+ E L L M +P+EVT + ++ CS+ G + QG
Sbjct: 490 ------------GMGKEGLLLLHAMIEKGVKPDEVTFLCALTGCSHTGLIQQG 530
>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28741911-28744729 | 20130731
Length = 786
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 134/311 (43%), Gaps = 55/311 (17%)
Query: 5 NPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSK-LASTYALTIF 63
NP+ IL + L + K++H + G+ ++ + S L+++ +K L+ A +F
Sbjct: 178 NPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVF 237
Query: 64 SSIPNPTVFLYNTLISSFTSHSSQIHLAFSLY---------------------------- 95
+P+ V +N +++++ + + FSL+
Sbjct: 238 DLMPHRDVVSWNGVLTAYFKNK-EYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRS 296
Query: 96 ------NRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQA 149
R + +PN T S+ AC S + + G +H +V + + D
Sbjct: 297 EEAVEMFRKMQKMGFKPNEITISSILPACSFSEN-LRMGKEIHCYVFRHWKVG-DLTSTT 354
Query: 150 SLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALY 209
+LL YAK G L +SR +FD + D+ WNT++ EAL+
Sbjct: 355 ALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGN------------GKEALF 402
Query: 210 LFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNL---KLNRFVGTALVD 266
LF M +SR +PN VT ++S CS+ + +GV + R++L N + + +VD
Sbjct: 403 LFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHY--SCVVD 460
Query: 267 MYSKCGCLNLA 277
+YS+ G LN A
Sbjct: 461 IYSRAGRLNEA 471
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 113/238 (47%), Gaps = 16/238 (6%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F +IP P +TLIS+ T+H + A +Y+ L + ++P+ F + KAC
Sbjct: 31 ARQLFDNIPQPDPTTCSTLISALTTHGLS-NEAIKIYSS-LQERGIKPDMPVFLAAAKAC 88
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
SG + +H + D FV +L++ Y K + +R +FD + D+ +
Sbjct: 89 AVSGDALRV-KEVHDDATR-CGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVS 146
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
W +L + + +F +M S +PN +T+ +++ AC+ L
Sbjct: 147 WTSL------------SSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKD 194
Query: 239 LSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L G H + +R+ + +N FV +ALV +Y+KC + A +FD + RD +N ++
Sbjct: 195 LKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVL 252
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 25/223 (11%)
Query: 97 RILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYA 156
R + ++PN T S+ AC + G +H ++ + FV ++L++ YA
Sbjct: 168 REMGWSGVKPNPMTVSSILPACAELKD-LKSGKEIHGFAVRH-GMVVNLFVCSALVSLYA 225
Query: 157 KYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXL------------------ 198
K + +R +FD + D+ +WN +L L
Sbjct: 226 KCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNA 285
Query: 199 -----EDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNN 253
+ S EA+ +F MQ +PNE+T+ +++ ACS L G HCY+ R+
Sbjct: 286 VIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHW 345
Query: 254 LKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ TAL+ MY+KCG LNL+ +FD + +D +N MI
Sbjct: 346 KVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMI 388
>Medtr1g084570.1 | PPR containing plant-like protein | HC |
chr1:37638715-37636265 | 20130731
Length = 606
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 116/241 (48%), Gaps = 20/241 (8%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTS--HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFK 116
A T+F +P+ V + ++I+ +TS H S+ A++++ +L ++PN+FT ++ K
Sbjct: 60 AHTLFDEMPHRDVIAWTSMITGYTSCNHHSR---AWNVFTNML-RDGVKPNAFTVSAVLK 115
Query: 117 ACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKY-GRLCVSRCLFDQISEPD 175
AC S G +H +K +V +L++ YA + +R +F+ I +
Sbjct: 116 AC-KSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLVFEDIGTKN 174
Query: 176 LATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSN 235
+W TL+ DA L +F M M + + +SAC++
Sbjct: 175 AVSWTTLITGYTHR---------RDA---FGGLRVFRQMFMEEGELSPFSFSIAVSACAS 222
Query: 236 LGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAM 295
+G+ + G H ++ + + N V A++DMY +C C + A QLF ++T +DT +N +
Sbjct: 223 IGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTL 282
Query: 296 I 296
I
Sbjct: 283 I 283
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 123/301 (40%), Gaps = 49/301 (16%)
Query: 15 LLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALT---------I 62
+L+ C SL L K VH GLA+ + + + L YA +
Sbjct: 113 VLKACKSLKALLCGKLVH------GLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLV 166
Query: 63 FSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRI-LAHKTLQPNSFTFPSLFKACCGS 121
F I + TLI+ +T H ++ ++ + L P F+F AC
Sbjct: 167 FEDIGTKNAVSWTTLITGYT-HRRDAFGGLRVFRQMFMEEGELSP--FSFSIAVSACASI 223
Query: 122 GHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRC------LFDQISEPD 175
G G +HA V+ +H +++L A C RC LF ++++ D
Sbjct: 224 GS-SNLGKQVHAAVI-------NHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKD 275
Query: 176 LATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSN 235
TWNTL+ E D S E+L +F M PN T ++I+AC+N
Sbjct: 276 TITWNTLIAG------------FETLD-SYESLCIFSQMVSEGFSPNCFTFTSVIAACAN 322
Query: 236 LGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAM 295
L L G H ++ L N + AL+DMY+KCG + + ++F + + + +M
Sbjct: 323 LAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSM 382
Query: 296 I 296
+
Sbjct: 383 M 383
>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37592279-37594828 | 20130731
Length = 572
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 29/242 (11%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFT--SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFK 116
A +F IP P V Y +I + S I A +L++ + + N ++ +
Sbjct: 141 AKKVFEEIPRPNVVSYTVMIDGYMKMEGGSGIKRARALFDAMPSR-----NEVSWTVMIS 195
Query: 117 ACCGSGHWFQYGPPLHAHVLK-FLEPPYDHFVQ-ASLLNFYAKYGRLCVSRCLFDQISEP 174
+G LH + F+ P + V +++ + K G++ + LF QI
Sbjct: 196 GLVENG--------LHEEAWEVFVRMPQKNVVAFTAMITGFCKQGKIDEAWNLFQQIRCK 247
Query: 175 DLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACS 234
D A WN ++ EAL LF M + +P+++T V+L +AC+
Sbjct: 248 DRACWNIMITG------------FAQNGRGEEALNLFSQMVRTGMQPDDLTFVSLFTACA 295
Query: 235 NLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNA 294
+L L +G T+ +++ L + V ALV MYSKCG + ++ FDQ++ D +N
Sbjct: 296 SLALLDEGRQTNALAIKHGLNSDLSVSNALVTMYSKCGEIVISELAFDQISHPDIVSWNT 355
Query: 295 MI 296
+I
Sbjct: 356 II 357
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 17/227 (7%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F I +N +I+ F + + + A +L+++++ +QP+ TF SLF AC
Sbjct: 237 AWNLFQQIRCKDRACWNIMITGF-AQNGRGEEALNLFSQMV-RTGMQPDDLTFVSLFTAC 294
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
S G +A +K D V +L+ Y+K G + +S FDQIS PD+ +
Sbjct: 295 A-SLALLDEGRQTNALAIKH-GLNSDLSVSNALVTMYSKCGEIVISELAFDQISHPDIVS 352
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
WNT++ L A Y F M + P+ +T + L+SAC G
Sbjct: 353 WNTIIAA------------FAQHGLYDRARYYFDHMVTAGVTPDGITFLNLLSACCRAGK 400
Query: 239 LSQGVWTHCYLLRNNLKLNRFVG-TALVDMYSKCGCLNLACQLFDQL 284
+ + V ++ L R + +VD+ S+ G L AC++ ++
Sbjct: 401 VDETVNLFDLMVHKYGILPRSEHYSCVVDVMSRAGQLLRACKVIQEM 447
>Medtr2g006810.1 | PPR containing plant-like protein | HC |
chr2:618974-616539 | 20130731
Length = 614
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 20/256 (7%)
Query: 46 HLLTISSKLASTYALTIFSSIPNPTVFLYNTLISSFT-SHSSQIHLAFSLYNRILAHKTL 104
H+ +I S +A +F I N +F Y ++I+++ S S ++ AF++ + I+ + L
Sbjct: 55 HVGSIKLNYNSDHAHKVFDEITNKDIFAYTSMITAYGHSRGSCVYGAFNIAS-IMQQQGL 113
Query: 105 QPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAK-YGRLCV 163
PN T SL A Q G +H + ++ D + +LL+ Y K G + +
Sbjct: 114 LPNQVTLVSLMDAAAKLVA-LQEGRAVHGYAVRRGIGLGDDVFETTLLDMYHKCAGCVGL 172
Query: 164 SRCLF---DQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRR 220
+ +F D + +WNTL+ +LEA LF M
Sbjct: 173 AASVFAKMDARKRTKVGSWNTLIAGYLRNGQ------------ALEAFELFRRMMCRNIL 220
Query: 221 PNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQL 280
P+ +TL +I C L L +G H Y++ ++L+ TALVD+Y K + A L
Sbjct: 221 PDLLTLANVIFCCVELNYLHRGKSIHGYMIMMGVELDLVASTALVDLYCKID-VTKARML 279
Query: 281 FDQLTDRDTFCYNAMI 296
F++L ++D YN M+
Sbjct: 280 FERLENKDAVVYNVMM 295
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 127/285 (44%), Gaps = 23/285 (8%)
Query: 18 KCHSLNTLKQVHAQMLTTGLALHTYCL-SHLLTISSKLASTYAL--TIFSSI---PNPTV 71
K +L + VH + G+ L + LL + K A L ++F+ + V
Sbjct: 129 KLVALQEGRAVHGYAVRRGIGLGDDVFETTLLDMYHKCAGCVGLAASVFAKMDARKRTKV 188
Query: 72 FLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPL 131
+NTLI+ + + + AF L+ R++ L P+ T ++ CC ++ G +
Sbjct: 189 GSWNTLIAGYLRNGQALE-AFELFRRMMCRNIL-PDLLTLANVI-FCCVELNYLHRGKSI 245
Query: 132 HAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXX 191
H +++ + D +L++ Y K + +R LF+++ D +N ++
Sbjct: 246 HGYMI-MMGVELDLVASTALVDLYCKID-VTKARMLFERLENKDAVVYNVMMSGY----- 298
Query: 192 XXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLR 251
LE+ +L EAL +FC+M PN + LISA S L + H Y+L+
Sbjct: 299 ------LEN-NLPAEALNVFCEMVKMNVSPNVALFINLISAVSKLRDIRLVRSIHGYVLK 351
Query: 252 NNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ ++ + + Y+KCG + ++F+++ D +N+MI
Sbjct: 352 HMHNMSVEIANQFIHAYAKCGYVVDEREVFNKMRTMDLVSWNSMI 396
>Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38735797-38738097 | 20130731
Length = 766
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 123/281 (43%), Gaps = 26/281 (9%)
Query: 10 HPILKLLQKCHSLNTLKQ---VHAQMLTTGLALHT--YCLSHLLTISSKLAS-TYALTIF 63
P++ LL+ C +LKQ +H +L +G L+H++ SK A +F
Sbjct: 67 QPLIDLLKSCEQNGSLKQANCIHGHVLKSGFGDRDNLVFLNHVVHAYSKCKDYDSARKVF 126
Query: 64 SSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
+ VF + +I + H A L+ +L + L + F F ++ ++C G
Sbjct: 127 DGMSERNVFSWTVMIVASNEHG-YYRYALELFCMML-EQGLLLDGFAFSAVLQSCVGLDS 184
Query: 124 WFQYGPPLHAHVL--KFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
+G +HA V+ FL V SLLN YAK G S +F+ +++ + +WN
Sbjct: 185 -VVFGEMVHAQVVVRGFL---MHAVVGTSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNA 240
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
++ L L+A +M + PN+ T + + A LG +++
Sbjct: 241 MISG------------FTSNGLYLQAFDFLINMIENGVSPNKTTFLCISKAVGLLGDINR 288
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFD 282
H Y L N VGTAL++MYSKCG L A LFD
Sbjct: 289 CHEVHRYAYEWGLDSNTSVGTALINMYSKCGVLCDARVLFD 329
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 131/294 (44%), Gaps = 42/294 (14%)
Query: 18 KCHSLNTLKQVHAQMLTTGL-ALHTYCLSHLLTISSKLASTYA-LTIFSSIPNPTVFLYN 75
KC L +LK+ H L G A+ L+ L K S A +F + + +
Sbjct: 387 KC--LKSLKEAHGVALKCGFDAMEISVLNALADAYVKCESLEAGEKVFYKMEKKDIVSWT 444
Query: 76 TLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHV 135
T+++++ S+ A +++++ + ++ PN FTF S+ AC G +YG +H +
Sbjct: 445 TMVTAYC-QCSEWGKALAIFSQ-MCNEGFAPNHFTFSSVITAC-GGLCLLEYGQQIHGLI 501
Query: 136 LKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXX 195
K + ++++L++ Y+K G L ++ +F++IS PD TW ++
Sbjct: 502 CK-ASLDAESCIESALIDMYSKCGNLTEAKNIFERISNPDTVTWTAIISTYAQH------ 554
Query: 196 XXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLK 255
L +AL LF M+ S + N VTL+ ++ ACS+ G + G+
Sbjct: 555 ------GLVEDALQLFRKMEQSAVKANAVTLLCILFACSHGGMVEDGLEI---------- 598
Query: 256 LNRFVGT-----------ALVDMYSKCGCLNLACQLFDQL-TDRDTFCYNAMIG 297
N+ GT +VD+ + G L+ A D++ + D + ++G
Sbjct: 599 FNQMEGTYGVVPEMEHYACVVDLLGRVGRLDEAVAFIDKMPIEPDEMVWQTLLG 652
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 15/223 (6%)
Query: 74 YNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHA 133
+N +I+ ++ + A ++ R + ++P+ +TF +F + G + H
Sbjct: 341 WNAMITGYSQAGCHLE-ALEMFTR-MCQNDVKPDLYTFCCVFNSIAGL-KCLKSLKEAHG 397
Query: 134 HVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXX 193
LK + V +L + Y K L +F ++ + D+ +W T++
Sbjct: 398 VALKCGFDAMEISVLNALADAYVKCESLEAGEKVFYKMEKKDIVSWTTMVTAYCQCSEWG 457
Query: 194 XXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNN 253
+AL +F M PN T ++I+AC L L G H + + +
Sbjct: 458 ------------KALAIFSQMCNEGFAPNHFTFSSVITACGGLCLLEYGQQIHGLICKAS 505
Query: 254 LKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L + +AL+DMYSKCG L A +F+++++ DT + A+I
Sbjct: 506 LDAESCIESALIDMYSKCGNLTEAKNIFERISNPDTVTWTAII 548
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 14/193 (7%)
Query: 105 QPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQAS-LLNFYAKYGRLCV 163
QPN L K+C +G Q +H HVLK D+ V + +++ Y+K
Sbjct: 63 QPNIQPLIDLLKSCEQNGSLKQ-ANCIHGHVLKSGFGDRDNLVFLNHVVHAYSKCKDYDS 121
Query: 164 SRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNE 223
+R +FD +SE ++ +W ++ AL LFC M +
Sbjct: 122 ARKVFDGMSERNVFSWTVMIVASNEHGYYRY------------ALELFCMMLEQGLLLDG 169
Query: 224 VTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQ 283
A++ +C L ++ G H ++ ++ VGT+L+++Y+K G + +F+
Sbjct: 170 FAFSAVLQSCVGLDSVVFGEMVHAQVVVRGFLMHAVVGTSLLNLYAKLGMCECSVNVFNN 229
Query: 284 LTDRDTFCYNAMI 296
+TD + +NAMI
Sbjct: 230 MTDVNDVSWNAMI 242
>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15372357-15367000 | 20130731
Length = 686
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 129/289 (44%), Gaps = 23/289 (7%)
Query: 16 LQKCHSLNTLK---QVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTV 71
L+ C SL TL+ VH + + S L+ + S+ A +F I N +
Sbjct: 39 LKTCLSLGTLEFGIGVHVDSIKLNFNSDCFVGSSLIRLYSQYGKIKDAHKVFDEITNKDI 98
Query: 72 FLYNTLISSFT-SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
F Y ++I+++ S S ++ AF+ I+ + + PN T SL A + G
Sbjct: 99 FAYTSMITAYGHSGGSCVYGAFNT-AFIMQQQGMLPNRVTLVSLMHAAA-KLRALREGQA 156
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLF---DQISEPDLATWNTLLXXXX 187
+H + ++ D + +LL+ Y K G + ++ +F D + +WN L+
Sbjct: 157 VHGYAVRREIGLGDDVFETTLLDMYHKCGGVGLAASVFAKMDARKMTKVGSWNALIAGY- 215
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
L + +LEA LF M P+ +TL I C L L +G+ H
Sbjct: 216 ----------LRNGQ-ALEAFELFRRMMCRNVLPDLLTLANAIFCCVELNYLRRGMSIHG 264
Query: 248 YLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
Y++ ++L+ TALVD+Y K + A +LF++L ++D YN M+
Sbjct: 265 YMITMGVELDLVASTALVDLYCKID-ITKARKLFERLGNKDAVVYNVMM 312
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 128/282 (45%), Gaps = 19/282 (6%)
Query: 19 CHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFSSIPNPTVFLYN 75
C LN L++ +H M+T G+ L + L+ + K+ T A +F + N +YN
Sbjct: 250 CVELNYLRRGMSIHGYMITMGVELDLVASTALVDLYCKIDITKARKLFERLGNKDAVVYN 309
Query: 76 TLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHV 135
+++ + + + A +++ R + N F +L A + +H +V
Sbjct: 310 VMMTGYLENGLPVE-AVNVF-REMVKTNASTNVALFLNLISALS-KLRDIRLVRSIHGYV 366
Query: 136 LKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXX 195
L+ + + + +++ YAK+G + +R +F+++ DL +W +++
Sbjct: 367 LRHMHITHVE-IANQIIHAYAKFGYVVDAREVFNRMRTRDLVSWTSMIKGYVYHGHID-- 423
Query: 196 XXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLK 255
+A+ LF +Q + VTL+ L+ A S LG LS HC+ R
Sbjct: 424 ----------KAIILFRLLQREHLSIDSVTLIGLLQALSQLGCLSFIKEVHCFSYRFFHG 473
Query: 256 LNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
+ V +L+ Y+KCG L A +F Q+T+R +NAMIG
Sbjct: 474 KDLSVNNSLITTYAKCGKLCTARYIFQQMTERCLTSWNAMIG 515
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 115/260 (44%), Gaps = 29/260 (11%)
Query: 38 ALHTYCLSHL----LTISSKLASTYA--------LTIFSSIPNPTVFLYNTLISSFTSHS 85
++H Y L H+ + I++++ YA +F+ + + + ++I + H
Sbjct: 361 SIHGYVLRHMHITHVEIANQIIHAYAKFGYVVDAREVFNRMRTRDLVSWTSMIKGYVYHG 420
Query: 86 SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDH 145
I A L+ R+L + L +S T L +A G + +H +F D
Sbjct: 421 -HIDKAIILF-RLLQREHLSIDSVTLIGLLQALSQLG-CLSFIKEVHCFSYRFFHGK-DL 476
Query: 146 FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSL 205
V SL+ YAK G+LC +R +F Q++E L +WN ++
Sbjct: 477 SVNNSLITTYAKCGKLCTARYIFQQMTERCLTSWNAMIGAYAMHGNYT------------ 524
Query: 206 EALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRN-NLKLNRFVGTAL 264
E L LF M+ + P+EVT ++++ACS+ G + +G+ +++ + N + +
Sbjct: 525 EVLELFDHMKAGKVTPDEVTFTSILTACSHSGLVEEGLQIFGIMMKEYAIVPNEVHYSCI 584
Query: 265 VDMYSKCGCLNLACQLFDQL 284
VD+ S+ G L A L +
Sbjct: 585 VDLLSRAGRLREAYNLVKSM 604
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 44/72 (61%)
Query: 225 TLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
T+ + C +LG L G+ H ++ N + FVG++L+ +YS+ G + A ++FD++
Sbjct: 34 TITFCLKTCLSLGTLEFGIGVHVDSIKLNFNSDCFVGSSLIRLYSQYGKIKDAHKVFDEI 93
Query: 285 TDRDTFCYNAMI 296
T++D F Y +MI
Sbjct: 94 TNKDIFAYTSMI 105
>Medtr5g098860.1 | PPR containing plant-like protein | HC |
chr5:43289378-43292142 | 20130731
Length = 828
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 115/240 (47%), Gaps = 19/240 (7%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
+L +F + +NT+IS+F + A L + K L +S T +L A
Sbjct: 379 SLKVFDKMLERDAVSWNTIISAFVQNGFD-EEALMLVCEMQKQKFL-IDSVTATALLSAA 436
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQ--ISEPDL 176
+ + G HA++++ +++ L++ YAK G + + LF+Q S+ D
Sbjct: 437 SNLRNLY-VGKQTHAYLIR--RGIQFEGMESYLIDMYAKSGSIRTAELLFEQNCSSDRDQ 493
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
ATWN ++ L+ +A+ L M + PN VTL +++ ACS++
Sbjct: 494 ATWNAIIAGYTQN------------GLNEKAILLLKQMLVQNVIPNAVTLASILPACSSM 541
Query: 237 GALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G++ H + +R L+ N +VGT+L D YSKCG ++ A +F + ++++ Y M+
Sbjct: 542 GSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMM 601
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 126/279 (45%), Gaps = 32/279 (11%)
Query: 35 TGLALHTYCL-SH--------------LLTISSKLASTYALTIFSSIPNPTVFLYNTLIS 79
TG A+H++ L SH LL + + YAL +F + V +NTLI
Sbjct: 135 TGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQHEYALNVFDVMRRRNVVAWNTLIL 194
Query: 80 SFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFL 139
SF + + N I ++++ P+ TF +LF A G + + + KF
Sbjct: 195 SFVKMNRYPQAVEAFANMI--NQSVMPSPVTFVNLFPALSKLGD-SRTVKMFYGFMRKFG 251
Query: 140 EP-PYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXL 198
+ D FV +S + ++ G + +R +FD+ + WNT++
Sbjct: 252 DQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQN--------- 302
Query: 199 EDADLSLEALYLFCDMQMSRRRP-NEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLN 257
+ +EA+ +F S ++VTL+++++A S L + H +++++
Sbjct: 303 ---NCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSL 359
Query: 258 RFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ A++ MYS+C ++ + ++FD++ +RD +N +I
Sbjct: 360 IIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTII 398
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 33/271 (12%)
Query: 38 ALHTYCLSHLLTISSKLASTYALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNR 97
A+ T S L + + AL + S+P P+ ++N++I F ++ H A LY +
Sbjct: 47 AISTSIRSRLSKLCREGQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLP-HQALLLYAK 105
Query: 98 ILAHK---TLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKF---LEPPYDHFVQASL 151
+ ++ T P +TF S KAC + G +H+H L+ V SL
Sbjct: 106 MRSNSSCSTFDP--YTFSSTLKACALTKDILT-GKAIHSHFLRSHSNTNTGPSRIVYNSL 162
Query: 152 LNFYAKYGRLC---VSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEAL 208
LN YA C + +FD + ++ WNTL+ +A+
Sbjct: 163 LNMYAS----CQHEYALNVFDVMRRRNVVAWNTLILSFVKMNRYP------------QAV 206
Query: 209 YLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLR---NNLKLNRFVGTALV 265
F +M P+ VT V L A S LG S+ V +R + + FV ++ +
Sbjct: 207 EAFANMINQSVMPSPVTFVNLFPALSKLGD-SRTVKMFYGFMRKFGDQYVSDVFVVSSAI 265
Query: 266 DMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
M+S GC++ A +FD+ +++T +N MI
Sbjct: 266 LMFSDVGCMDYARMVFDRCLNKNTEIWNTMI 296
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 26/224 (11%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIF-----SSIPNPTVFLYNTLISS 80
KQ HA ++ G+ S+L+ + +K S + SS + +N +I+
Sbjct: 446 KQTHAYLIRRGIQFEGM-ESYLIDMYAKSGSIRTAELLFEQNCSSDRDQAT--WNAIIAG 502
Query: 81 FTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHA-HVLKFL 139
+T + A L ++L + PN+ T S+ AC G LH + +FL
Sbjct: 503 YTQNGLN-EKAILLLKQMLVQNVI-PNAVTLASILPACSSMGS-MGLARQLHGFSIRRFL 559
Query: 140 EPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLE 199
E + +V SL + Y+K G + + +F + E + T+ T++
Sbjct: 560 EK--NVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQH---------- 607
Query: 200 DADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
+ AL L+ M S RP+ VT VA++SAC+ G + +G+
Sbjct: 608 --GMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGL 649
>Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:874317-871628 | 20130731
Length = 505
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 37/295 (12%)
Query: 15 LLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFSSIPNPTVFL 73
LL+ C + +T+ Q HAQ L L + + LL +KL ++A +F +P +
Sbjct: 9 LLRTCKTHSTVSQCHAQTLLQSLLPNVILETDLLLAYTKLGLISHARKLFDKMPQRNMHS 68
Query: 74 YNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFK------ACCGSGHWFQY 127
+N +I+S+T H+S A +++ L P+ +T P LFK CC
Sbjct: 69 WNIMIASYT-HNSMYFDALTVFEAFKRCGVL-PDCYTLPPLFKISIRIDECC-------L 119
Query: 128 GPPLHAHVLKFLEPPYDHFV--QASLLNFYAKYGRLCVSRCLFDQISEP-DLATWNTLLX 184
G H V+K Y+ V S+L FY K G + + +F + P D ATWN ++
Sbjct: 120 GWMCHGLVVKL---GYEEIVVVNNSVLEFYVKCGTMSQALSVFSNHNAPRDSATWNLMIS 176
Query: 185 XXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR--RPNEVTLVALISACSNLGALSQG 242
A L EA++ F +M R + +TL +++SAC G L +
Sbjct: 177 G------------FGKAGLYSEAVHCFREMLKYRNGIELDHMTLPSILSACGKEGDLLKV 224
Query: 243 VWTHCYLLRN-NLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H +++RN + +G AL+D Y KCG L + +F + + + MI
Sbjct: 225 KEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKDSENIFKTVCYVNLVTWTTMI 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 59 ALTIFSSIPNP-TVFLYNTLISSFTS---HSSQIHLAFSLYNRILAHKT-LQPNSFTFPS 113
AL++FS+ P +N +IS F +S +H + +L ++ ++ + T PS
Sbjct: 155 ALSVFSNHNAPRDSATWNLMISGFGKAGLYSEAVHC----FREMLKYRNGIELDHMTLPS 210
Query: 114 LFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISE 173
+ AC G + +H +++ D + +L++ Y K G L S +F +
Sbjct: 211 ILSACGKEGDLLKV-KEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKDSENIFKTVCY 269
Query: 174 PDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISAC 233
+L TW T++ E++ LF M RPN VTL A++++C
Sbjct: 270 VNLVTWTTMISCYGMHGKGQ------------ESVVLFEKMMDEGFRPNAVTLTAILASC 317
Query: 234 SNLGALSQGVWTHCYLLRN-NLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
S+ G L QG ++ + L+ +VD++S+CG L A QL +++
Sbjct: 318 SHCGLLDQGKKIFGSMISDYGLEPTAEHYACMVDLFSRCGRLEEALQLLERM 369
>Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:11695650-11697815 | 20130731
Length = 446
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 13/154 (8%)
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
D VQ SL+N Y K G + + +F+ + E +A+W+ ++ ++
Sbjct: 6 DVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHAC------------VEM 53
Query: 204 SLEALYLFCDMQMSRR-RPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGT 262
E L L M R R E TLV ++SAC++LG+ G H LLRN +LN V T
Sbjct: 54 WNECLMLLGKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKT 113
Query: 263 ALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+L+DMY K GCL ++F +++++ + Y MI
Sbjct: 114 SLIDMYVKSGCLEKGLRVFKNMSEKNRYSYTVMI 147
>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:11323375-11320804 | 20130731
Length = 724
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 14/154 (9%)
Query: 147 VQASLLNFYAKYGRLCVSRCL--FDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
V + L++ Y+K + C+ F++I +PDL WNT++ + DL
Sbjct: 280 VGSGLIDLYSKCAPHGMLECMKVFEEIPKPDLVLWNTMISGFS-----------QHEDLC 328
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRF-VGTA 263
+AL F +MQ P++ + V +ISACSNL + S G H +++++ NR V A
Sbjct: 329 EDALSSFREMQRVGFCPDDCSFVCVISACSNLSSPSVGKQVHALAIKSDIPCNRVSVNNA 388
Query: 264 LVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
V MYSKCG L+ A ++FD + +++T N+MI
Sbjct: 389 FVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIA 422
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 21/277 (7%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSKLASTYALT---IFSSIPNPTVFLYNTLISSFTS 83
Q H +M+ +G +++ S L+ + SK A L +F IP P + L+NT+IS F+
Sbjct: 264 QFHGKMIKSGFHRNSHVGSGLIDLYSKCAPHGMLECMKVFEEIPKPDLVLWNTMISGFSQ 323
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPY 143
H A S + R + P+ +F + AC G +HA +K P
Sbjct: 324 HEDLCEDALSSF-REMQRVGFCPDDCSFVCVISACSNLSSP-SVGKQVHALAIKSDIPCN 381
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
V + + Y+K G L +R +FD + E + + N+++
Sbjct: 382 RVSVNNAFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIAGYAQHGA------------ 429
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG-- 261
+E+L LF M + PN +T ++++SAC++ G + +G + +++ +
Sbjct: 430 EIESLQLFELMLQEKIVPNNITFISVLSACAHTGKVDEGE-KYFNMMKEKFGIEPEAEHY 488
Query: 262 TALVDMYSKCGCLNLACQLFDQLT-DRDTFCYNAMIG 297
+ ++D+ + G LN A ++ + + D + + A++G
Sbjct: 489 SCMIDLLGRAGKLNKAERIIETMPFDPGSIEWAALLG 525
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 132/316 (41%), Gaps = 47/316 (14%)
Query: 15 LLQKCHSLN---TLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
LL++C + T K +HA + + + TY +H + SK + + ALT F P
Sbjct: 16 LLKQCITQKDFLTGKTLHAFYIKSFIPHSTYLSNHFTLLYSKFGTFSNALTAFHFTGYPN 75
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSG-----HWF 125
VF YNT+I + H+ +LA L++ I + N+ + CG
Sbjct: 76 VFSYNTIIHACAKHNLP-NLAHQLFDEIPEPDVVSYNTLIAVHARRGECGQAVSVFKEVR 134
Query: 126 QYGPPLHAHVLKFLEPP-------------------YDHFVQA--SLLNFYAKYGRLCVS 164
+ G L L + YD + ++L Y + GRL +
Sbjct: 135 EVGLVLDGFTLSGVISASVEDVGLVRQLHCFALLCGYDCYASVCNAVLACYGRLGRLNEA 194
Query: 165 RCLFDQISEP--DLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPN 222
+F ++ E D+ +WN ++ +AL LF +M+ +
Sbjct: 195 WRVFREMGEGCRDMVSWNAMIVACGQHRE------------GAKALRLFGEMERMGLEVD 242
Query: 223 EVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLN-LAC-QL 280
T+ ++++A + L L+ G+ H ++++ N VG+ L+D+YSKC L C ++
Sbjct: 243 MFTMASVLTAFTCLKDLAGGMQFHGKMIKSGFHRNSHVGSGLIDLYSKCAPHGMLECMKV 302
Query: 281 FDQLTDRDTFCYNAMI 296
F+++ D +N MI
Sbjct: 303 FEEIPKPDLVLWNTMI 318
>Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:9292413-9288471 | 20130731
Length = 1125
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 121/291 (41%), Gaps = 34/291 (11%)
Query: 16 LQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY--------ALTIFSSIP 67
L C++L LK VHA +H + + H L I + L + Y A + +P
Sbjct: 560 LSACYNLEKLKIVHA------FVIH-FAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP 612
Query: 68 NPTVFLYNTLISSFTSHS--SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWF 125
V +N LI + AF+L R + L N T +L C +
Sbjct: 613 ERDVVTWNALIGGHADDKDPNATIQAFNLMRR----EGLLSNYITIVNLLGTCMSPDYLL 668
Query: 126 QYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXX 185
++G P+HAH++ D +VQ+SL+ YA+ G L S +FD ++ + +TWN +
Sbjct: 669 KHGMPIHAHIV-VAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSA 727
Query: 186 XXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWT 245
EAL M+ ++ + ++ NL L +G
Sbjct: 728 NAHYGPGE------------EALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQL 775
Query: 246 HCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
H ++++ +L+ +V A +DMY KCG ++ ++ R +N +I
Sbjct: 776 HSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILI 826
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 135/289 (46%), Gaps = 24/289 (8%)
Query: 12 ILKLLQKCHSLNTLK---QVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIP 67
I LL C S LK +H + +GL + + LL++ ++ S+ A +F ++P
Sbjct: 455 ISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMP 514
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
+ +N++++S H L + K + N TF + AC + +
Sbjct: 515 ARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAM--NYVTFTTALSAC----YNLEK 568
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
+HA V+ F ++ + +L+ Y K+G + ++ + + E D+ TWN L+
Sbjct: 569 LKIVHAFVIHF-AVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHA 627
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISAC-SNLGALSQGVWTH 246
+D + +++A L M+ N +T+V L+ C S L G+ H
Sbjct: 628 DD---------KDPNATIQAFNL---MRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIH 675
Query: 247 CYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAM 295
+++ +L+ +V ++L+ MY++CG LN + +FD L ++++ +NA+
Sbjct: 676 AHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAI 724
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 114/268 (42%), Gaps = 50/268 (18%)
Query: 61 TIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSF----------- 109
I S + +V + N+LIS F ++ S + A ++N + T+ NS
Sbjct: 376 VIKSGLDTSSVSVANSLISMFGNYDS-VEEASRVFNNMQERDTISWNSIITASAHNGRFE 434
Query: 110 -------------------TFPSLFKACCGSGHWFQYGPPLHAHVLK-FLEPPYDHFVQA 149
T +L AC GS ++G LH + K LE + V
Sbjct: 435 ESLGHFFWMRRTHPKTDYITISALLPAC-GSAQHLKWGRGLHGLITKSGLES--NVCVCN 491
Query: 150 SLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALY 209
SLL+ YA+ G + +F + DL +WN+++ +ED S A+
Sbjct: 492 SLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASH-----------VEDGKYS-HAIL 539
Query: 210 LFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYS 269
L +M +R+ N VT +SAC NL L H +++ + N +G LV MY
Sbjct: 540 LLVEMLKTRKAMNYVTFTTALSACYNLEKLKI---VHAFVIHFAVHHNLIIGNTLVTMYG 596
Query: 270 KCGCLNLACQLFDQLTDRDTFCYNAMIG 297
K G ++ A ++ + +RD +NA+IG
Sbjct: 597 KFGLMDEAQKVCKIMPERDVVTWNALIG 624
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 90 LAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQA 149
L++ ++ I H Q + F + G+ G LHA +K + + F
Sbjct: 133 LSYGIHTFIRNHSNPQVSRFLQKGFSEISEGN-----VGKALHALCVKDV-IQQNTFYTN 186
Query: 150 SLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALY 209
+L+N Y+K+G + ++ +FD++ + + A+WN ++ +A+
Sbjct: 187 TLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYH------------KAMQ 234
Query: 210 LFCDMQMSRRRPNEVTLVALISACSNLGALSQGV-WTHCYLLRNNLKLNRFVGTALVDMY 268
FC M + P+ + ++++AC G +++G H Y+++ L N FVGT+L+ Y
Sbjct: 235 FFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFY 294
Query: 269 SKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G ++ A +LF+++ + + + +++
Sbjct: 295 GTHGSVSEANKLFEEIEEPNIVSWTSLM 322
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 116/274 (42%), Gaps = 20/274 (7%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFT-- 82
+Q+H ++ GL + + + LL S + A +F I P + + +L+ +
Sbjct: 269 RQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADN 328
Query: 83 SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPP 142
H+ ++ ++Y R L H L T ++ + C G G + V+K
Sbjct: 329 GHTKEV---LNIY-RHLRHNGLICTGNTMATVIRTCGMFGD-KTMGYQILGDVIKSGLDT 383
Query: 143 YDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDAD 202
V SL++ + Y + + +F+ + E D +WN+++
Sbjct: 384 SSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFE--------- 434
Query: 203 LSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGT 262
E+L F M+ + + + +T+ AL+ AC + L G H + ++ L+ N V
Sbjct: 435 ---ESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCN 491
Query: 263 ALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+L+ MY++ G A +F + RD +N+M+
Sbjct: 492 SLLSMYAQAGSSEDAELVFHTMPARDLISWNSMM 525
>Medtr8g075460.1 | PPR containing plant-like protein | HC |
chr8:31911388-31913406 | 20130731
Length = 672
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 112/230 (48%), Gaps = 23/230 (10%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHS--SQIHLAFSLYNRILAHKTLQPNSFTFPSLFK 116
A +F+S+PN T+ +N+++ T ++ S+ FS+ N++ ++ + F+F S+
Sbjct: 380 AKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMNKL----DVKMDKFSFASVIS 435
Query: 117 ACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDL 176
AC + G L + L D + SL++FY K G + + R +FD + + D
Sbjct: 436 ACAIKSS-LELGEQLFGKAIT-LGLESDQIICTSLVDFYCKCGLVEMGRKVFDGMIKTDE 493
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
+WNT+L +EAL LF +M S RP+ +T ++SAC +
Sbjct: 494 VSWNTMLMGYATN------------GYGIEALTLFNEMGYSGVRPSAITFTGILSACDHC 541
Query: 237 GALSQGVWTHCYLLRNNLKLNRFVG--TALVDMYSKCGCLNLACQLFDQL 284
G + +G ++++ +N + + +VD++++ GC A L +++
Sbjct: 542 GLVEEGR-DLFRTMKHDYDINPGIEHYSCMVDLFARVGCFGEAMYLIEEM 590
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 131/322 (40%), Gaps = 46/322 (14%)
Query: 4 QNPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTI 62
Q+ + I+ KC L++ A+++ + + LS L++ + + A +
Sbjct: 196 QDKVLCSSIVNFYGKCGDLDSA----ARVVGFVKEVDDFSLSALVSGYANAGRMSDARKV 251
Query: 63 FSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAH--------------------- 101
F + +P L+N++IS + S+ ++ A +L+N++ +
Sbjct: 252 FDNKVDPCSVLWNSIISGYVSNGEEME-ALALFNKMRRNGVWGDFSAVANILSISSSLLN 310
Query: 102 ----KTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAH--VLKFLE-PPYDHFVQASLLNF 154
K + ++F + S Y H H F E YD + +++
Sbjct: 311 VELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPHDSCKLFHELKVYDAILLNTMITV 370
Query: 155 YAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDM 214
Y GR+ ++ +F+ + L +WN++L L EAL F M
Sbjct: 371 YCNCGRVEDAKEVFNSMPNKTLISWNSILVG------------LTQNACPSEALDTFSMM 418
Query: 215 QMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCL 274
+ ++ + ++ISAC+ +L G + L+ ++ + T+LVD Y KCG +
Sbjct: 419 NKLDVKMDKFSFASVISACAIKSSLELGEQLFGKAITLGLESDQIICTSLVDFYCKCGLV 478
Query: 275 NLACQLFDQLTDRDTFCYNAMI 296
+ ++FD + D +N M+
Sbjct: 479 EMGRKVFDGMIKTDEVSWNTML 500
>Medtr3g088820.1 | PPR containing plant-like protein | HC |
chr3:40646143-40648516 | 20130731
Length = 698
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 111/238 (46%), Gaps = 16/238 (6%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F +P +N LI+++ S A SL+ + ++ N+ TF S+ +C
Sbjct: 117 AQELFDEMPQRDGGSWNALITAY-SRLRYPDEAISLF-LWMNKDGVRANNITFASVLGSC 174
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
+ +H V+KF + + ++L++ YAK G + +R +F +I P+ T
Sbjct: 175 ADV-YELSLSQQVHGLVVKF-GFSSNVIIGSALVDVYAKCGIMVYARRMFHEIPRPNAVT 232
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
WN ++ D + EA+ LF M +P T + ACS++ A
Sbjct: 233 WNVIVRRYL------------DVGDAKEAVLLFTRMFSDGVKPLNFTFSNALVACSSMHA 280
Query: 239 LSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L +G+ H +++ L + V ++L++MY KCG L ++F QL +D C+ ++
Sbjct: 281 LEEGMQIHGGVVKWGLHEDTVVSSSLINMYVKCGELENGFRVFHQLGSKDLVCWTCIV 338
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 127/300 (42%), Gaps = 33/300 (11%)
Query: 4 QNPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIF 63
++ + + ++ + KC L +V Q+ + L T C+ +S K A +F
Sbjct: 298 EDTVVSSSLINMYVKCGELENGFRVFHQLGSKDLVCWT-CIVSGYAMSGKTWD--ARKLF 354
Query: 64 SSIPNPTVFLYNTLISSFT---SHSSQIHLAFSLYNRI--LAHKTLQPNSFTFPSLFKAC 118
+P V +N +++ +T S + + + + L H TL L
Sbjct: 355 DQMPVRNVISWNAMLAGYTRFFKWSEALDFVCLMLDTVKDLDHVTLGLMINVSAGLLDHE 414
Query: 119 CGSG-HWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISE-PDL 176
G H F Y H++++ V ++L+ Y K G L +R F+ +S D
Sbjct: 415 MGKQLHGFVYRHGFHSNLM----------VGNAILDMYGKCGNLNSARVWFNLMSNWRDR 464
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
+WN LL S + L +F +MQ +P++ T L++AC+N
Sbjct: 465 VSWNALLASCGLHHS------------SEQTLTMFSEMQW-EAKPSKYTFGTLLAACANT 511
Query: 237 GALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+L G H +++R+ +++ + TAL+ MY KC CL A ++ RD +N +I
Sbjct: 512 YSLHLGKQIHGFIIRHEFQIDSVIRTALIYMYCKCYCLEYAVEILKGAVSRDVIMWNTLI 571
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 141 PPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLED 200
PP F++ L YAK L ++ LFD++ + D +WN L+ L
Sbjct: 96 PPI--FLRNRALEAYAKCSSLHDAQELFDEMPQRDGGSWNALITAYSR---------LRY 144
Query: 201 ADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFV 260
D EA+ LF M R N +T +++ +C+++ LS H +++ N +
Sbjct: 145 PD---EAISLFLWMNKDGVRANNITFASVLGSCADVYELSLSQQVHGLVVKFGFSSNVII 201
Query: 261 GTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G+ALVD+Y+KCG + A ++F ++ + +N ++
Sbjct: 202 GSALVDVYAKCGIMVYARRMFHEIPRPNAVTWNVIV 237
>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:27639852-27642151 | 20130731
Length = 707
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 109/238 (45%), Gaps = 24/238 (10%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F + VF + T++S + + + ++ +A L+ ++ + N ++ ++
Sbjct: 195 ARELFDEMKVRNVFTWTTMVSGY-AKNGRVDVARKLFE-VMPER----NEVSWTAMLMGY 248
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
SG + A +K++ + +Q L G + +R +F+ + E D T
Sbjct: 249 TQSGRMKEAFELFEAMPVKWIVACNEMILQFGLA------GEMHRARMMFEGMKERDEGT 302
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
WN ++ E L LEAL LF MQ N ++++++S C++L +
Sbjct: 303 WNAMIKV------------FERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLAS 350
Query: 239 LSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L G H L+R+ + +V + L+ MY KCG L A +F++ +D +N+MI
Sbjct: 351 LDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMI 408
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 107/248 (43%), Gaps = 32/248 (12%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFK-- 116
A +F + +N +I F + A L+ R+ + FPS+
Sbjct: 288 ARMMFEGMKERDEGTWNAMIKVFERKGLDLE-ALGLFARMQREGV----ALNFPSMISVL 342
Query: 117 ACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDL 176
+ C S +G +HA +++ E D +V + L+ Y K G L ++ +F++ D+
Sbjct: 343 SVCASLASLDHGRQVHARLVRS-EFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDV 401
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
WN+++ L EAL +F DM S +P+EVT + ++SACS
Sbjct: 402 VMWNSMITGYSQH------------GLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYS 449
Query: 237 GALSQGVWTHCYLLRNNLKLNRFVGTA------LVDMYSKCGCLNLACQLFDQL-TDRDT 289
G + +G + + +K V +VD+ + G ++ A +L +++ + D
Sbjct: 450 GKVKEG-----FEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDA 504
Query: 290 FCYNAMIG 297
+ A++G
Sbjct: 505 IVWGALLG 512
>Medtr4g073930.1 | PPR containing plant-like protein | HC |
chr4:28099513-28096632 | 20130731
Length = 597
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 30/261 (11%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F +P +N ++ + +H + A Y + + N FTF S+ C
Sbjct: 131 ARGVFYKMPEKDCVSWNAMVVGY-AHCGRFSEALRFYG-WMRRVCVGYNEFTFASVLIVC 188
Query: 119 CGSGHWFQYGPPLHAHVL--KFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDL 176
F+ +H V+ FL V +S+++ YAK G++ + LFD ++ D+
Sbjct: 189 VKLKE-FELCRQIHGQVVVVGFLSNVV---VSSSIVDAYAKCGKMEDAMRLFDDMTVRDI 244
Query: 177 ATWNTLLXXXXXXXXXXXXXXL-------------------EDADLSLEALYLFCDMQMS 217
W TL+ + ++ +AL +F M M
Sbjct: 245 PAWTTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTALIGGYARNGMAHKALGVFRKMIMH 304
Query: 218 RRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLA 277
R RP+E T + + AC+ + +L G H +LLRNN++ N V +A+VDMY+KCG + A
Sbjct: 305 RVRPDEFTFSSCLFACATIASLKHGKQIHAFLLRNNIRPNPVVVSAVVDMYAKCGSMETA 364
Query: 278 CQLFDQLTD--RDTFCYNAMI 296
++F+ T+ +D +N MI
Sbjct: 365 RRIFN-FTEHMQDVVLWNTMI 384
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 92/186 (49%), Gaps = 17/186 (9%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +FS +P + + LI + + + H A ++ +++ H+ ++P+ FTF S AC
Sbjct: 263 AAEMFSQMPKKNTYSWTALIGGY-ARNGMAHKALGVFRKMIMHR-VRPDEFTFSSCLFAC 320
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISE-PDLA 177
++G +HA +L+ P + V +++++ YAK G + +R +F+ D+
Sbjct: 321 ATIAS-LKHGKQIHAFLLRNNIRP-NPVVVSAVVDMYAKCGSMETARRIFNFTEHMQDVV 378
Query: 178 TWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLG 237
WNT++ L EA+ + DM S +PN TLVA+++ACS+ G
Sbjct: 379 LWNTMISA------------LAHYGYGKEAVLMLNDMLKSGVKPNRNTLVAILNACSHSG 426
Query: 238 ALSQGV 243
+ G+
Sbjct: 427 LVCDGL 432
>Medtr4g119120.1 | PPR containing plant-like protein | HC |
chr4:49335688-49337418 | 20130731
Length = 576
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 121/296 (40%), Gaps = 44/296 (14%)
Query: 28 VHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSHSS 86
+H + G Y + LL + K+ A +F +P+ V +N+L+S +
Sbjct: 126 IHGHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIK-GG 184
Query: 87 QIHLAFSLYNRILAHKTLQPNSFT-----FPSLFKACCGSGHWFQYGPP----------- 130
+ ++ I + N + +AC + FQ P
Sbjct: 185 NLDEGQRFFDEIPLKDVISWNCMVSGYAKAGKMDRAC----YLFQQMPERNFASWNTMIT 240
Query: 131 --------LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTL 182
+ A L P + +++ Y+K G + +R LFDQ+ + DL ++N +
Sbjct: 241 GYVDCGSIVEARELFDAMPRRNSVSLITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAM 300
Query: 183 LXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQM--SRRRPNEVTLVALISACSNLGALS 240
+ EAL LF M S P+++TL ++ISACS LG L
Sbjct: 301 IACYAQSSKPK------------EALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNLE 348
Query: 241 QGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
W + + L+ + TAL+D+Y+KCG ++ A +LF L RD Y+AMI
Sbjct: 349 HWRWIESQINNFGIVLDDHLATALIDLYAKCGSIDKAYELFHGLRKRDVVAYSAMI 404
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 132/322 (40%), Gaps = 69/322 (21%)
Query: 15 LLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISS----KLASTYALTIFSSIPNPT 70
L++KC ++ KQ+HAQ++T L H + + K S Y L+I + NP
Sbjct: 9 LMKKCSTVKHAKQIHAQIITNNLTHLEPIFIHRILLCDITNYKTISNYILSILHHLRNPD 68
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
F + +I F S Q A SLY + + L P+S S+ K+C G
Sbjct: 69 SFSWGCVIR-FFSQKGQFVEAVSLYVQ-MRRIGLCPSSHAVSSILKSCARVEDDL-CGLL 125
Query: 131 LHAHVLKFLEPPYDH--FVQASLLNFYAKYGRLCVSRCLFDQISEP-------------- 174
+H HV KF +D +VQ +LL+ Y K G + +R +FD++ +
Sbjct: 126 IHGHVHKF---GFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIK 182
Query: 175 -----------------DLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMS 217
D+ +WN ++ A A YLF QM
Sbjct: 183 GGNLDEGQRFFDEIPLKDVISWNCMVSGYAK------------AGKMDRACYLF--QQMP 228
Query: 218 RRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDM---YSKCGCL 274
R N + +I+ + G++ + + R N +L+ M YSK G +
Sbjct: 229 ER--NFASWNTMITGYVDCGSIVEARELFDAMPRRN-------SVSLITMIAGYSKSGDV 279
Query: 275 NLACQLFDQLTDRDTFCYNAMI 296
+ A +LFDQ+ D+D YNAMI
Sbjct: 280 HSARELFDQMDDKDLLSYNAMI 301
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 34/255 (13%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKT-LQPNSFTFPSLFKA 117
+L +F + PN V +NT+I + LA ++AH T P +F+ +
Sbjct: 219 SLEMFRNFPNKDVVSWNTIIDGLIQCGYE-RLALEQLYCMVAHGTEFSPVTFSIALIL-- 275
Query: 118 CCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQI------ 171
S + G LH VL F D ++++SL+ Y K GR+ + + +
Sbjct: 276 -VSSLSLVEVGRQLHGRVLTF-GLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLR 333
Query: 172 --------SEPD--LATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRP 221
EP + +W++++ ED + ++ C++ + R
Sbjct: 334 KGNFGVTCKEPKARMVSWSSMVSGYVWNGK------YEDGMKTFRSM--VCELIVVDIR- 384
Query: 222 NEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLF 281
T+ +ISAC+N G L G H Y+ + L+++ +VG++L+DMYSK G L+ A +F
Sbjct: 385 ---TVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIF 441
Query: 282 DQLTDRDTFCYNAMI 296
+Q+ + + + +MI
Sbjct: 442 EQIKEPNVVLWTSMI 456
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 124/268 (46%), Gaps = 36/268 (13%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIP--------------NPT 70
+Q+H ++LT GL Y S L+ + K A TI +P P
Sbjct: 286 RQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPK 345
Query: 71 VFL--YNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYG 128
+ +++++S + + + + R + + + + T ++ AC +G ++G
Sbjct: 346 ARMVSWSSMVSGYV-WNGKYEDGMKTF-RSMVCELIVVDIRTVATIISACANAG-ILEFG 402
Query: 129 PPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXX 188
+HA++ K + D +V +SL++ Y+K G L + +F+QI EP++ W +++
Sbjct: 403 KQIHAYIQK-IGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCAL 461
Query: 189 XXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCY 248
EA+ LF M PNEVT V +++ACS++G + +G +
Sbjct: 462 HGQGK------------EAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGC-RYFR 508
Query: 249 LLRNNLKLNRFVG--TALVDMYSKCGCL 274
++++ +N V T++V++Y + G L
Sbjct: 509 MMKDTYHINPEVEHYTSMVNLYGRAGHL 536
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 11/147 (7%)
Query: 151 LLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYL 210
LL Y K L + LFD+I+ + TW L+ A S L
Sbjct: 73 LLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARA-----------AGSSELVFSL 121
Query: 211 FCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSK 270
F +MQ PN+ TL +++ CS + G H ++LRN + + + +++D+Y K
Sbjct: 122 FREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLK 181
Query: 271 CGCLNLACQLFDQLTDRDTFCYNAMIG 297
C A F+ + ++D +N MIG
Sbjct: 182 CKEFEYAESFFELMIEKDVVSWNIMIG 208
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 115/284 (40%), Gaps = 29/284 (10%)
Query: 24 TLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFT 82
+L+ +H G ++LLT+ K ++ +A +F I + + LIS F
Sbjct: 50 SLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFA 109
Query: 83 SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPP 142
+ L FSL+ + A PN +T S+ K CC + Q+G +HA +L+
Sbjct: 110 RAAGSSELVFSLFREMQADGAC-PNQYTLSSVLK-CCSRENNIQFGKGIHAWILRN-GVG 166
Query: 143 YDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXL---- 198
D ++ S+L+ Y K + F+ + E D+ +WN ++ +
Sbjct: 167 GDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNF 226
Query: 199 --EDA----------------DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALS 240
+D L+LE LY M + VT + S+L +
Sbjct: 227 PNKDVVSWNTIIDGLIQCGYERLALEQLYC---MVAHGTEFSPVTFSIALILVSSLSLVE 283
Query: 241 QGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
G H +L L + ++ ++LV+MY KCG ++ A + +
Sbjct: 284 VGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDV 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 17/166 (10%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSH 84
KQ+HA + GL + Y S L+ + SK S AL IF I P V L+ ++IS H
Sbjct: 403 KQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALH 462
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSG------HWFQYGPPLHAHVLKF 138
Q A SL+ +L + + PN TF + AC G +F+ +
Sbjct: 463 -GQGKEAISLFEGML-NLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTY-----H 515
Query: 139 LEPPYDHFVQASLLNFYAKYGRLCVSRC-LFDQISEPDLATWNTLL 183
+ P +H+ S++N Y + G L ++ +F+ + W + L
Sbjct: 516 INPEVEHY--TSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFL 559
>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:41303481-41301142 | 20130731
Length = 634
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 108/265 (40%), Gaps = 47/265 (17%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTL-------------- 104
A +F IP P YNT+++ + H IH A ++ + T
Sbjct: 91 ARQLFDKIPEPNTVSYNTMLACYLHHFG-IHNARDFFDWMPVRDTASWNTMLSGYAQVRM 149
Query: 105 ------------QPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQ-ASL 151
+ N T+ ++ G L A V F P + ++
Sbjct: 150 MDEARRLLVAMPEKNCVTWSAMVSGYVACG-------DLDAAVECFYAAPMKSVITWTAM 202
Query: 152 LNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLF 211
+ Y K+GR+ ++ LF ++S L TWN ++ D + L LF
Sbjct: 203 ITGYMKFGRVGLAEMLFWKLSLKTLVTWNAMIAGYV------------DNGRAENGLKLF 250
Query: 212 CDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKC 271
M + +PN ++L +++ CS+L AL G H + ++ L + T+L+ MYSKC
Sbjct: 251 KTMLETGVKPNALSLTSVLLGCSDLSALQTGKQVHQLVCKSPLSRDTTAVTSLISMYSKC 310
Query: 272 GCLNLACQLFDQLTDRDTFCYNAMI 296
G L + LF Q+ +D +NAMI
Sbjct: 311 GDLKDSWDLFVQIPRKDVVTWNAMI 335
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 19/228 (8%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F + T+ +N +I+ + + + L+ +L ++PN+ + S+ C
Sbjct: 215 AEMLFWKLSLKTLVTWNAMIAGYVD-NGRAENGLKLFKTML-ETGVKPNALSLTSVLLGC 272
Query: 119 CGSGHWFQYGPPLHAHVLKFLEP-PYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLA 177
Q G +H V K P D SL++ Y+K G L S LF QI D+
Sbjct: 273 SDLSA-LQTGKQVHQLVCK--SPLSRDTTAVTSLISMYSKCGDLKDSWDLFVQIPRKDVV 329
Query: 178 TWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLG 237
TWN ++ +AL+LF +M+ S +P+ +T VA++ AC++ G
Sbjct: 330 TWNAMISGYAQHGAGE------------KALHLFDEMKKSEIKPDWITFVAVLLACNHAG 377
Query: 238 ALSQGVWTHCYLLRN-NLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
+ G +++ +K +VD+ + G L+ A + +
Sbjct: 378 MVDLGTKYFNSMVKEFGIKTRPEHYGCMVDLLGRAGRLSEAVDMVKSM 425
>Medtr4g098940.1 | PPR containing plant-like protein | HC |
chr4:40871758-40869320 | 20130731
Length = 575
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 107/240 (44%), Gaps = 18/240 (7%)
Query: 61 TIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCG 120
++F I + + Y + + S+++ I + I + L + +F C
Sbjct: 166 SVFGRIDDARLIFYESYVLDLVSYNTMID-GYVKNGGIRDARKLFDEMYE-RDVFSWNCM 223
Query: 121 SGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISE---PDLA 177
+ G A L P D +++ + G + ++ F+Q+ ++
Sbjct: 224 IAGYVSVGDLAAAKELFEAMPNKDVVSWNCMIDGCVRVGNVSLALEFFNQMDGVVVRNVV 283
Query: 178 TWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRR-PNEVTLVALISACSNL 236
+WN+LL E L +F M S PNE TLV++++AC+NL
Sbjct: 284 SWNSLLALHVRMKNYG------------ECLRMFERMMESGEAMPNEATLVSVLTACANL 331
Query: 237 GALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G L+ G+W H Y+ N +KL+ + T L+ MY+KCG ++LA +F ++ + +N+MI
Sbjct: 332 GKLNLGLWVHSYIKSNEIKLDVLLETCLLTMYAKCGAMDLASDVFVEMPVKSIVSWNSMI 391
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALT------IFSS 65
+L L+ Q+H Q++ L H L T + K S++ T F
Sbjct: 23 LLSALESTTGTQHFNQIHTQLIINNLIQHPL----LSTTAIKKLSSHPRTTPSSALFFDH 78
Query: 66 IPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWF 125
+ +P FL NT+I S+ SS AF Y + K++ PN +TFP + K C G
Sbjct: 79 LHHPDAFLCNTIIRSYL-RSSNPSAAFHFYYHRMIAKSVPPNHYTFPLILKLCVDHGCKL 137
Query: 126 QYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
+ G HA V+KF D FV+ SL+ Y+ +GR+ +R +F + DL ++NT++
Sbjct: 138 E-GEKGHARVVKF-GFLSDLFVRNSLIRMYSVFGRIDDARLIFYESYVLDLVSYNTMI 193
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 96/194 (49%), Gaps = 17/194 (8%)
Query: 94 LYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLN 153
++ R++ PN T S+ AC G G +H+++ K E D ++ LL
Sbjct: 304 MFERMMESGEAMPNEATLVSVLTACANLGK-LNLGLWVHSYI-KSNEIKLDVLLETCLLT 361
Query: 154 FYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCD 213
YAK G + ++ +F ++ + +WN+++ + D +LE +F +
Sbjct: 362 MYAKCGAMDLASDVFVEMPVKSIVSWNSMIMGYGLHG---------NGDKALE---MFAE 409
Query: 214 MQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG--TALVDMYSKC 271
M+ + ++PNE T + ++SACS+ G + +G W + L+R K+ V +VD+ ++
Sbjct: 410 MEKAGQKPNEATFICVLSACSHAGMVMEG-WWYFDLMRRVYKIEPKVEHYGCMVDLLARA 468
Query: 272 GCLNLACQLFDQLT 285
G + + +L ++++
Sbjct: 469 GFVKNSEELIEKVS 482
>Medtr4g078750.1 | PPR containing plant-like protein | HC |
chr4:30434764-30433246 | 20130731
Length = 470
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 140/323 (43%), Gaps = 70/323 (21%)
Query: 12 ILKLLQKCHS-LNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFSS-IPNP 69
+L+L Q+C +KQ+H+ ++T G +L S AS FS+ I
Sbjct: 8 LLQLAQRCMKHQKQMKQIHSLVITNG---------YLNFQKSNNAS------FSNHIKWM 52
Query: 70 TVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGP 129
L N LI ++ H+ + F ++ +LA+ + PN+ TFP L K S F
Sbjct: 53 PTLLCNALIRAYNVHNH--NKVFVIFTNMLAN-NVSPNTHTFPPLLK----SSSAFVV-T 104
Query: 130 PLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
PLH LK L P FV +LL YA+ + ++ +F+++ + N ++
Sbjct: 105 PLHCQALKRGILSDP---FVLTTLLVVYARTNHIVCAQKVFEEVPMFCIVASNAMINAFT 161
Query: 188 XXXXXXXXXXLEDADLSLE-------------------------ALYLFCDMQMSRR--- 219
+E A L E A+ F M +
Sbjct: 162 MNGN------MEGALLVFEWMPYRDVVSWTTMVNGFALSGNFGAAIRFFGTMMRHKDVLD 215
Query: 220 ---RPNEVTLVALISACSNL---GALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGC 273
+PNE T V+++S+C+ L GAL G H Y++ + L FVGT+L+++Y K GC
Sbjct: 216 CLVKPNEATYVSVLSSCTELEGKGALDFGRQVHGYIVVKGVDLGVFVGTSLINLYGKMGC 275
Query: 274 LNLACQLFDQLTDRDTFCYNAMI 296
LN + +F + R+ +NAMI
Sbjct: 276 LNYSASVFRVMVVREVCTWNAMI 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 25/194 (12%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTL-----QPNSFTFPS 113
AL +F +P V + T+++ F + S A + ++ HK + +PN T+ S
Sbjct: 169 ALLVFEWMPYRDVVSWTTMVNGF-ALSGNFGAAIRFFGTMMRHKDVLDCLVKPNEATYVS 227
Query: 114 LFKACC---GSGHWFQYGPPLHAH-VLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFD 169
+ +C G G +G +H + V+K ++ FV SL+N Y K G L S +F
Sbjct: 228 VLSSCTELEGKGA-LDFGRQVHGYIVVKGVD--LGVFVGTSLINLYGKMGCLNYSASVFR 284
Query: 170 QISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVAL 229
+ ++ TWN ++ L EAL LF M++ +PN +T VA+
Sbjct: 285 VMVVREVCTWNAMISS------------LASNGREKEALDLFEKMKLQGLKPNSITFVAV 332
Query: 230 ISACSNLGALSQGV 243
++AC+ G +S+G+
Sbjct: 333 LTACARGGFVSEGL 346
>Medtr1g038860.1 | PPR containing plant-like protein | LC |
chr1:14313044-14316621 | 20130731
Length = 625
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 116/261 (44%), Gaps = 36/261 (13%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
AL +F +P V +NT++++ +H +I A L+N + + ++ ++
Sbjct: 158 ALDLFGRMPERNVVSWNTVMTAL-AHCGRIDDAERLFNEMRERDVV-----SWTTMVAGL 211
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQ-ASLLNFYAKYGRLCVSRCLFDQISEPDLA 177
+G + A F + P + V +++ YA+ GR + LF+++ E D+
Sbjct: 212 SKNGR-------VDAAREVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMP 264
Query: 178 TWNTLLXXXXXXXXXXXXXXLEDA-------------------DLSLEALYLFCDMQMSR 218
+WNT++ L A LS EAL LF MQ +
Sbjct: 265 SWNTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQAND 324
Query: 219 R-RPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLA 277
+P T V ++ ACS+L L +G H + + + + +V +AL++MYSKCG ++A
Sbjct: 325 GLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVA 384
Query: 278 CQLFDQLTDR--DTFCYNAMI 296
++FD D +N MI
Sbjct: 385 KKMFDDGLSGHMDLIAWNGMI 405
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 22/231 (9%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F ++P V + +++ + H A L+N++ A+ L+P + TF ++ AC
Sbjct: 282 AEQLFHAMPQKNVITWTAMMTGYVQHGLS-EEALKLFNKMQANDGLKPTTGTFVTVLGAC 340
Query: 119 CGSGHWFQYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQ--ISEP 174
G +H + K F E Y V ++L+N Y+K G V++ +FD
Sbjct: 341 SDLAG-LPEGQQIHQMISKTVFQESTY---VVSALINMYSKCGDFHVAKKMFDDGLSGHM 396
Query: 175 DLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACS 234
DL WN ++ EA+ LF MQ + N+VT V L++ACS
Sbjct: 397 DLIAWNGMIAAYAHHGYGN------------EAINLFNKMQELGFQANDVTYVGLLTACS 444
Query: 235 NLGALSQGVWTHCYLLRNN-LKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
+ G +G LL+N +++ T L+D+ + G L+ A + + L
Sbjct: 445 HAGLFDEGFKYFDELLKNRYIQVREDHYTCLIDLCGRAGRLDEALNIIEGL 495
>Medtr2g026210.1 | PPR containing plant-like protein | HC |
chr2:9478558-9480181 | 20130731
Length = 467
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Query: 124 WFQYGPP--LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
W YG +HAH++ P + +++ LL YAK G L ++ LF+ + E D WN
Sbjct: 67 WKNYGRGRRIHAHMIIVGYVP-NEYLKIKLLILYAKSGCLETAQFLFNNLVEKDSFAWNA 125
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
++ ++ LE Y +M+ + RP++ T ++ AC+ L L
Sbjct: 126 MIAGYVQKGL---------EEVGLETFY---EMRQASLRPDQYTFASVFRACATLALLEP 173
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
G H +L+ + N V +AL+DMY KC C+ LFD+ R+T + +I
Sbjct: 174 GRQAHGVMLKCQIGDNVVVNSALIDMYFKCSCICDGRLLFDKCLSRNTITWTTLI 228
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 104/231 (45%), Gaps = 20/231 (8%)
Query: 15 LLQKC---HSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
+LQ+C + +++HA M+ G + Y LL + +K A +F+++
Sbjct: 60 MLQECIFWKNYGRGRRIHAHMIIVGYVPNEYLKIKLLILYAKSGCLETAQFLFNNLVEKD 119
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
F +N +I+ + + + Y + +L+P+ +TF S+F+AC + + G
Sbjct: 120 SFAWNAMIAGYVQKGLEEVGLETFYE--MRQASLRPDQYTFASVFRAC-ATLALLEPGRQ 176
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
H +LK + + V ++L++ Y K +C R LFD+ + TW TL+
Sbjct: 177 AHGVMLK-CQIGDNVVVNSALIDMYFKCSCICDGRLLFDKCLSRNTITWTTLISGYGKHG 235
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
+E L F M RPN VT +A++ ACS++G + +
Sbjct: 236 QV------------VEVLDSFHRMISESFRPNYVTFLAVLVACSHVGLIDE 274
>Medtr8g035960.1 | PPR containing plant-like protein | HC |
chr8:13156718-13159093 | 20130731
Length = 791
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 108/243 (44%), Gaps = 30/243 (12%)
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQP-NSFTFPSLFKACCG 120
+F IP P N + +F H + A S++ LQ + T FKAC G
Sbjct: 40 LFEKIPQPNASSINRSMLNFL-HKNLPFQALSVFKNQTQFPFLQNIDEVTLALSFKACRG 98
Query: 121 SGHWFQYGPPLHAHVL--KFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
F G +H V+ F+ V SL+ Y K GR ++ C+F+ +S PD+ +
Sbjct: 99 E---FILGAQIHGFVVATGFVSRVT---VSNSLMKMYCKAGRFELALCVFEGLSCPDIVS 152
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
WNT+L + S++AL C M ++ + VT +S C +
Sbjct: 153 WNTILSGF---------------EKSVDALNFACFMHLNGVVFDPVTYTTALSFCWDRDY 197
Query: 239 LSQ-----GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYN 293
G+ H +++ F+G ALV MYS+ G L+ A ++F+++T RD +N
Sbjct: 198 WDDHGFLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWN 257
Query: 294 AMI 296
AM+
Sbjct: 258 AML 260
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 27/275 (9%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSH 84
KQ+H G H + L++ SK A +F + V + TLIS +
Sbjct: 310 KQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLISIDEEN 369
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
SL+N + + PN TF L A + + G +H LK +
Sbjct: 370 ------VVSLFNAMRV-DGVYPNDVTFIGLLHAITIR-NMVKEGLMVHGLCLKSCLSS-E 420
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
V SL+ YAK+ + S+ +F++++ +WN L+ L
Sbjct: 421 QNVSNSLITMYAKFESIQESKKIFEELNYQGTISWNALISGYAQN------------GLC 468
Query: 205 LEALYLFCDMQMSRRRPNEVTLVAL---ISACSNLGALSQGVWTHCYLLRNNLKLNRFVG 261
EA F + +PN+ T ++ I+A ++ +L G H +L++ L + FV
Sbjct: 469 KEAFLTFLS-AIKEIKPNQYTFGSVLNAIAAAEDI-SLKHGQRCHSHLIKLGLNTDPFVA 526
Query: 262 TALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
AL+DMY K G +N + ++F++ ++ F + MI
Sbjct: 527 GALLDMYGKRGNINESQRVFNETPEKTQFSWTGMI 561
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 119/273 (43%), Gaps = 24/273 (8%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSHS 85
Q+H+ ++ G + + L+T+ S+ A +F+ + + +N ++S +
Sbjct: 208 QLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEG 267
Query: 86 SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDH 145
L L + + + + + AC G ++G +H K Y
Sbjct: 268 ECYGLEAVLLFGNMVREGMLLDHVSLTGAISAC-GYTKNLEFGKQIHGLAQKL---GYGT 323
Query: 146 FVQA--SLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
V L++ Y+K L ++ +F +S ++ +W TL+ +++ ++
Sbjct: 324 HVAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLIS-------------IDEENV 370
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTA 263
+ LF M++ PN+VT + L+ A + + +G+ H L++ L + V +
Sbjct: 371 ----VSLFNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNS 426
Query: 264 LVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L+ MY+K + + ++F++L + T +NA+I
Sbjct: 427 LITMYAKFESIQESKKIFEELNYQGTISWNALI 459
>Medtr2g007570.1 | PPR containing plant-like protein | HC |
chr2:1033154-1029007 | 20130731
Length = 558
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 34/284 (11%)
Query: 11 PILKLLQKCHSLNTLKQVHA---QMLTTGLALHTY--CLSHLLTISSKLAST-YALTIFS 64
P+ + L +++ LKQ+HA + L H + L +L S++ ++ YA +F
Sbjct: 12 PLNQFLNNAKNISHLKQIHALFLKHLPQNAPHHFFNRLLFRVLHFSAEKSNLYYAHKLFD 71
Query: 65 SIPN-PTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
++PN F++ +LI +F SH + S + R + K + P+ FTF + AC
Sbjct: 72 TMPNCSNCFIWTSLIRAFLSHHTHFCHCISTFAR-MHQKGILPSGFTFSLVLNACGRVPA 130
Query: 124 WFQYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
F+ G +HA +++ FL + VQ +LL+ YAK G +C +R +FD I + D+ W
Sbjct: 131 GFE-GKQVHARLVQSGFLG---NKIVQTALLDMYAKCGHVCDARDVFDGIVDRDVVAWTA 186
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
++ A ++A +LF +M N T +++ +N G +
Sbjct: 187 MICGYA------------KAGRMVDARFLFDNMG----ERNSFTWTTMVAGYANYGDMKA 230
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLT 285
+ Y + N + A++ Y K G ++ A ++FD++T
Sbjct: 231 AM--ELYDVMNG--KDEVTWVAMIAGYGKLGNVSEARRIFDEIT 270
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 113/272 (41%), Gaps = 24/272 (8%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPTVFLYNTLISSFTSH 84
KQVHA+++ +G + + LL + +K A +F I + V + +I +
Sbjct: 135 KQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRDVVAWTAMICGYAKA 194
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
+ R L + NSFT+ ++ + YG A L + D
Sbjct: 195 GRMVDA------RFLFDNMGERNSFTWTTMVAG------YANYGDMKAAMELYDVMNGKD 242
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLS 204
+++ Y K G + +R +FD+I+ P WN +
Sbjct: 243 EVTWVAMIAGYGKLGNVSEARRIFDEITVP----WNP-------STCAALLACYAQNGHA 291
Query: 205 LEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTAL 264
EA+ ++ M+ ++ + +V +V ISAC+ L + + + V AL
Sbjct: 292 REAIEMYEKMRRAKIKVTDVAMVGAISACAQLRDIRMSNSLTYNIEEGFCEKTHIVSNAL 351
Query: 265 VDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ M SKCG ++LA + F+ + +RD + Y+AMI
Sbjct: 352 IHMQSKCGNIDLAWREFNIMRNRDLYTYSAMI 383
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%)
Query: 211 FCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSK 270
F M P+ T +++AC + A +G H L+++ N+ V TAL+DMY+K
Sbjct: 103 FARMHQKGILPSGFTFSLVLNACGRVPAGFEGKQVHARLVQSGFLGNKIVQTALLDMYAK 162
Query: 271 CGCLNLACQLFDQLTDRDTFCYNAMI 296
CG + A +FD + DRD + AMI
Sbjct: 163 CGHVCDARDVFDGIVDRDVVAWTAMI 188
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 39/295 (13%)
Query: 16 LQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY--------ALTIFSSIP 67
L + +LN++ ++HAQ++ T Y + TI + Y A+ IF
Sbjct: 61 LNELRTLNSVMELHAQIIKTP---KNY---NFATIDGTMMRNYLEFGDFLSAIKIFFVGF 114
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
L+N+ + F S ++N + + K ++ +S F + K C F +
Sbjct: 115 ARNYLLWNSFLEEFESFGGDPFEILVVFNEMYS-KGVEFDSKAFTFVLKICLALRE-FLF 172
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G +HA ++K D + +L+NFY K + + +F + + WNT++
Sbjct: 173 GLEVHACLIK-KGFHVDVHLSCALINFYGKCWSIDKANQVFHETPYKEDFLWNTIVM--- 228
Query: 188 XXXXXXXXXXLEDADLSLE----ALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGV 243
A+L E AL LFCDMQ + T V ++ AC L AL++G
Sbjct: 229 -------------ANLRSERWKNALELFCDMQRDSAKATVGTTVKMLQACGKLKALNEGK 275
Query: 244 WTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTD--RDTFCYNAMI 296
H Y LR L N V +++ MYS+ LA +FD + D R+ +N++I
Sbjct: 276 QLHGYALRFGLVSNTLVCNSIISMYSRNSRFKLARAVFDSMEDHSRNLSSWNSVI 330
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 153/384 (39%), Gaps = 104/384 (27%)
Query: 13 LKLLQKC---HSLNTLKQVHAQMLTTGLALHTYCLSHLLTISS-----KLA--------- 55
+K+LQ C +LN KQ+H L GL +T + ++++ S KLA
Sbjct: 259 VKMLQACGKLKALNEGKQLHGYALRFGLVSNTLVCNSIISMYSRNSRFKLARAVFDSMED 318
Query: 56 -----STYALTIFS------------SIPN--------PTVFLYNTLISSFTSHSSQIHL 90
S++ IFS +I N P + +N+++S + S +
Sbjct: 319 HSRNLSSWNSVIFSYAVDGCLNDALDTIRNGMECSGIKPDIITWNSILSGYLLRGSFEMV 378
Query: 91 AFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQAS 150
S R L +P+S + S +A G +F+ G +H ++++ YD +V S
Sbjct: 379 LTSF--RSLHSLGFKPDSCSVTSALQAVIELG-FFKLGKEIHGYIMR-SNLNYDVYVCTS 434
Query: 151 LLNFYAK-------------------------------YGRLCVSRCLFDQISE----PD 175
L++ Y K G+ + L +Q+ E PD
Sbjct: 435 LVDMYVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPD 494
Query: 176 LATWNTLLXXXXXXXXXXXXXXLEDADLS-----------------------LEALYLFC 212
L TWN L+ + + S ++AL +F
Sbjct: 495 LVTWNGLVSGYSMQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFS 554
Query: 213 DMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCG 272
MQ +PN T+ +L+ AC+ L +G HC+ ++ + +V TAL+DMYS+ G
Sbjct: 555 QMQAENVKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIYVATALIDMYSEAG 614
Query: 273 CLNLACQLFDQLTDRDTFCYNAMI 296
L +A +F+++ ++ C+N M+
Sbjct: 615 KLKVAYNVFNKIQEKTLPCWNCMM 638
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 27/234 (11%)
Query: 59 ALTIFSSIPN----PTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSL 114
ALTI + I + P V + LIS S + + A +++++ A + ++PNS T SL
Sbjct: 514 ALTIINRIKSSGITPNVVSWTALISG-CSQNEKYMDALKIFSQMQA-ENVKPNSTTICSL 571
Query: 115 FKACCGSGHWFQYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQIS 172
AC G + G LH +K F++ D +V +L++ Y++ G+L V+ +F++I
Sbjct: 572 LCACAGPS-LLKKGEELHCFSMKLGFVD---DIYVATALIDMYSEAGKLKVAYNVFNKIQ 627
Query: 173 EPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISA 232
E L WN ++ E + L+ M+ RP+ +T AL+SA
Sbjct: 628 EKTLPCWNCMMMGYAIHSHGE------------EVMILYDKMRERHIRPDAITFTALLSA 675
Query: 233 CSNLGALSQGVWTHCYLLRNNLKLNRFVG--TALVDMYSKCGCLNLACQLFDQL 284
C N G + +G W + ++ + + + +VD+ K G L+ A + +
Sbjct: 676 CKNSGLVDEG-WKYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFLDEASHFIETM 728
>Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15028593-15026470 | 20130731
Length = 571
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 32/189 (16%)
Query: 141 PPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXL-- 198
P FV +L++ YAK G++ + +++++ D+ TWN ++ L
Sbjct: 38 PVSGFFVGNALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFG 97
Query: 199 ----EDADLSL-----------------EALYLFCDMQMSRRRPNEVTLVALISACSNLG 237
E +L + EA+ +F M RPN VTL++L+S C+++G
Sbjct: 98 KMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVG 157
Query: 238 ALSQGVWTHCYLLR------NNLKLNRFVG-TALVDMYSKCGCLNLACQLFDQL--TDRD 288
AL G THCY ++ +N + G AL+DMY+KC L +A +FD++ DRD
Sbjct: 158 ALLHGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRD 217
Query: 289 TFCYNAMIG 297
+ MIG
Sbjct: 218 VVTWTVMIG 226
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 114/253 (45%), Gaps = 29/253 (11%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYN--RILAHKTLQPNSFTFPSLFK 116
AL++F + + L SS S +Q + R + + +PN T SL
Sbjct: 92 ALSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLS 151
Query: 117 ACCGSGHWFQYGPPLHAHVLKFL------EPPYDHFVQASLLNFYAKYGRLCVSRCLFDQ 170
C G +G H + +KF+ + D +L++ YAK L V+R +FD+
Sbjct: 152 GCASVGALL-HGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDE 210
Query: 171 I--SEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR--RPNEVTL 226
I + D+ TW ++ DA+ AL LF +M PN+ T+
Sbjct: 211 ICPKDRDVVTWTVMIGGYAQYG---------DAN---HALQLFSEMFKFDNCIVPNDFTI 258
Query: 227 VALISACSNLGALSQGVWTHCYLLRNNLKLNR---FVGTALVDMYSKCGCLNLACQLFDQ 283
++ AC+ L AL G H Y+LR + +++ FV L+DMYSK G ++ A +FD
Sbjct: 259 SCVLMACARLAALRFGKQIHAYVLRRS-RIDSDVLFVANCLIDMYSKSGDVDTAQVVFDS 317
Query: 284 LTDRDTFCYNAMI 296
++ R+ + +++
Sbjct: 318 MSKRNAISWTSLL 330
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 15/198 (7%)
Query: 99 LAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKY 158
LA + + T+ +L ++C F G LH+ + L + FV+ L++ YAK
Sbjct: 74 LAEQGCRVKPITYMNLLQSCIDKDCIF-IGKELHSRI--GLVENVNPFVETKLVSMYAKC 130
Query: 159 GRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSR 218
G L ++R +F+++S +L TW+ ++ E + LF M
Sbjct: 131 GLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWG------------EVVGLFYAMMRDG 178
Query: 219 RRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLAC 278
P+E L ++ AC L G H ++R ++ ++ + +++ +Y+KCG ++ A
Sbjct: 179 VLPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAK 238
Query: 279 QLFDQLTDRDTFCYNAMI 296
++FD + +RD+ +NAMI
Sbjct: 239 KIFDCMDERDSVAWNAMI 256
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 128/323 (39%), Gaps = 88/323 (27%)
Query: 50 ISSKLASTYA--------LTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAH 101
+ +KL S YA +F+ + +F ++ +I + + S + Y +
Sbjct: 119 VETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFY--AMMR 176
Query: 102 KTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRL 161
+ P+ F P + +AC G + G +H+ V++ + ++ S++ YAK G +
Sbjct: 177 DGVLPDEFLLPKVLQAC-GKCRDLETGRLIHSMVIR-RGMRWSKHLRNSIMAVYAKCGEM 234
Query: 162 CVSRCLFDQIS-----------------------------------EPDLATWNTLLXXX 186
++ +FD + EP L TWN L+
Sbjct: 235 DCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCY 294
Query: 187 XXXXXXXXXXXLEDADLSLE--------------------------------ALYLFCDM 214
L DL+++ AL L +M
Sbjct: 295 NQ---------LGHCDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEM 345
Query: 215 QMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCL 274
++ N +T+ + SAC+ L +LS G+ H ++ NL N VG +L+DMY KCG L
Sbjct: 346 FLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDL 405
Query: 275 NLACQLFDQLTDRDTFCYNAMIG 297
A +FD +++RD + +N++IG
Sbjct: 406 KAAQHIFDMMSERDVYSWNSIIG 428
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 122 GHWFQYGPPLHAHVL----KFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEP--- 174
G +FQ G AH L + + P + ++ Y + G + LF I +
Sbjct: 428 GGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKT 487
Query: 175 --DLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISA 232
+ A+WN+L+ +AL +F +MQ PN VT+++++
Sbjct: 488 KRNAASWNSLISGFVQSGQKD------------KALQIFRNMQFCHILPNSVTILSILPV 535
Query: 233 CSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCY 292
C+NL A + HC+ +R L V L+D Y+K G L + +F++L+ +D +
Sbjct: 536 CANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSKNIFNELSWKDAVSW 595
Query: 293 NAMI 296
N+M+
Sbjct: 596 NSML 599
>Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:15006779-15004629 | 20130731
Length = 675
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 83/161 (51%), Gaps = 25/161 (15%)
Query: 150 SLLNFYAKYGRLCVSRCLF----DQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSL 205
+++ Y++ GR + LF ++I E D+ TW++++
Sbjct: 21 AMVTGYSQNGRFEDALSLFGKMREEIIELDVVTWSSVISGYAQRG------------FGC 68
Query: 206 EALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLR-------NNLKLNR 258
EA+ +F M R RPN V L++L+SAC+++GAL G THCY ++ N+ +
Sbjct: 69 EAMDVFRKMCGCRCRPNVVKLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDNDDL 128
Query: 259 FVGTALVDMYSKCGCLNLACQLFDQL--TDRDTFCYNAMIG 297
V AL+DMY+KC L +A +FD++ DRD + MIG
Sbjct: 129 AVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIG 169
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 29/253 (11%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHL---AFSLYNRILAHKTLQPNSFTFPSLF 115
AL++F + + L SS S +Q A ++ ++ + +PN SL
Sbjct: 35 ALSLFGKMREEIIELDVVTWSSVISGYAQRGFGCEAMDVFRKMCGCRC-RPNVVKLMSLL 93
Query: 116 KACCGSGHWFQYGPPLHAHVLKFL------EPPYDHFVQASLLNFYAKYGRLCVSRCLFD 169
AC G +G H + +KF+ + D V +L++ YAK L V+R +FD
Sbjct: 94 SACASVGALL-HGKETHCYSVKFILKGEHNDDNDDLAVINALIDMYAKCKSLEVARAMFD 152
Query: 170 QI--SEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR--RPNEVT 225
+I + D+ TW ++ DA+ AL LF +M PN+ T
Sbjct: 153 EICPKDRDVVTWTVMIGGYAQYG---------DAN---HALQLFSEMFKFDNCIVPNDFT 200
Query: 226 LVALISACSNLGALSQGVWTHCYLLRNNLKLNR--FVGTALVDMYSKCGCLNLACQLFDQ 283
+ ++ +C+ L AL G H Y+LR +L + FV L+DMYSK G ++ A +FD
Sbjct: 201 ISCVLMSCARLSALIFGKHIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDS 260
Query: 284 LTDRDTFCYNAMI 296
++ R+ + +++
Sbjct: 261 MSKRNAISWTSLL 273
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 31/266 (11%)
Query: 59 ALTIFSSI--PNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKT-LQPNSFTFPSLF 115
A +F I + V + +I + + H A L++ + + PN FT +
Sbjct: 147 ARAMFDEICPKDRDVVTWTVMIGGYAQYGDANH-ALQLFSEMFKFDNCIVPNDFTISCVL 205
Query: 116 KACCGSGHWFQYGPPLHAHVLKFLEPPYDH-FVQASLLNFYAKYGRLCVSRCLFDQISEP 174
+C +G +HA+VL+ D FV L++ Y+K G + ++ +FD +S+
Sbjct: 206 MSCARLSALI-FGKHIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKR 264
Query: 175 DLATWNTLLXXXXXXXXXXXXXXLEDADLSLEAL--------------------YLFCDM 214
+ +W +LL + D ++ EAL LF +M
Sbjct: 265 NAISWTSLLTGYGMHGCSEDAFRVFD-EMRKEALSFGNGGSWNRFVXGDANHALQLFSEM 323
Query: 215 QMSRR--RPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNR--FVGTALVDMYSK 270
PN+ T+ ++ +C+ L AL G H ++LR + + FV L+DMYSK
Sbjct: 324 FKIDNCIVPNDFTISCVLMSCARLSALKFGKQIHAHVLRRSHSNSDVLFVANCLIDMYSK 383
Query: 271 CGCLNLACQLFDQLTDRDTFCYNAMI 296
G ++ A +FD ++ R+ + +++
Sbjct: 384 SGDVDTAQVVFDSMSKRNAVSWTSLL 409
>Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14170762-14173219 | 20130731
Length = 503
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 21/166 (12%)
Query: 140 EPPYDHFVQASLLNFY---------AKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+P H V + ++N + K G +++ +FD++ D+ TWNT++
Sbjct: 54 QPNIAHHVFSRVMNLFNMNLVIESLVKSGECDIAKKVFDKMPVRDVVTWNTVIGGYVKNL 113
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
L+AL +F M ++ P+ T ++++ C+ LG+ W H ++
Sbjct: 114 RF------------LDALSIFRVMLKAKVEPDGFTFASVVTGCARLGSFCNAKWVHGLMV 161
Query: 251 RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
++LN + ALVDMY+KCG ++++ ++F+ + +NAMI
Sbjct: 162 EKKVELNYILTAALVDMYAKCGRVDVSKEVFECVVRDHVSVWNAMI 207
>Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:43569310-43567382 | 20130731
Length = 526
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 79/146 (54%), Gaps = 15/146 (10%)
Query: 151 LLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYL 210
++ Y K G + +R LFD++ +L TW+T++ D ++E +
Sbjct: 55 MIKGYFKCGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCF---------DKAVEIFEI 105
Query: 211 FCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSK 270
D + NEV +SAC++LGAL+ G + + +R NL LN +GTA+VDMY++
Sbjct: 106 LIDEGLV---ANEV---GAVSACAHLGALAAGEKAYEHAIRINLDLNVILGTAIVDMYAR 159
Query: 271 CGCLNLACQLFDQLTDRDTFCYNAMI 296
CG + A ++F+++ ++D + ++I
Sbjct: 160 CGNVEKAVRVFEEMKEKDVISWTSLI 185
>Medtr4g133610.1 | PPR containing plant-like protein | HC |
chr4:55889196-55891282 | 20130731
Length = 573
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 134/283 (47%), Gaps = 34/283 (12%)
Query: 11 PILKLLQKCHSLNTLKQVHA---QMLTTGLALHTY--CLSHLLTISSKLASTY-ALTIFS 64
P+ + L +++ LKQ+HA + L H + L +L S++ ++ Y A +F
Sbjct: 12 PLNQFLNNAKNISHLKQIHALFLKHLPQNAPHHFFDRLLFRVLHFSAEKSNLYYAHKLFD 71
Query: 65 SIPN-PTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
++PN F++ +LI +F SH + S + I+ K + P+ FTF S+ AC
Sbjct: 72 TMPNCSNCFIWTSLIRAFLSHHTHFRHCISTF-AIMHQKGILPSGFTFSSVLNACGRVPA 130
Query: 124 WFQYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
F+ G +HA +++ FL + VQ +LL+ YAK G +C +R +FD + + D+ W
Sbjct: 131 VFE-GKQVHARLVQSGFLG---NKIVQTALLDMYAKCGYVCDARDVFDGMVDRDVVAWTA 186
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
++ A ++A LF +M N T +++ +N G +
Sbjct: 187 MICGYA------------KAGRMVDARLLFDNMG----ERNSFTWTTMVAGYANYGDMKA 230
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
+ Y + N + +V A++ Y K G ++ A ++FD++
Sbjct: 231 AM--ELYDVMNGKEEVTWV--AMIAGYGKLGNVSEARRIFDEI 269
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 116/273 (42%), Gaps = 26/273 (9%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPTVFLYNTLISSFTSH 84
KQVHA+++ +G + + LL + +K A +F + + V + +I +
Sbjct: 135 KQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICGYAKA 194
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
+ R+L + NSFT+ ++ + YG A L + +
Sbjct: 195 GRMVDA------RLLFDNMGERNSFTWTTMVAG------YANYGDMKAAMELYDVMNGKE 242
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQISEP-DLATWNTLLXXXXXXXXXXXXXXLEDADL 203
+++ Y K G + +R +FD+I P + +T LL
Sbjct: 243 EVTWVAMIAGYGKLGNVSEARRIFDEIPVPLNPSTCAALLACYAQNGH------------ 290
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTA 263
+ EA+ ++ M+ ++ + +V +V ISAC+ L + + + V A
Sbjct: 291 AREAIEMYEKMRRAKIKVTDVAMVGAISACAQLRDIRMSNLLTYDIEEGFCEKTHIVSNA 350
Query: 264 LVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L+ M SKCG ++LA + F+ + +RD + Y+AMI
Sbjct: 351 LIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMI 383
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 221 PNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQL 280
P+ T ++++AC + A+ +G H L+++ N+ V TAL+DMY+KCG + A +
Sbjct: 113 PSGFTFSSVLNACGRVPAVFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDV 172
Query: 281 FDQLTDRDTFCYNAMI 296
FD + DRD + AMI
Sbjct: 173 FDGMVDRDVVAWTAMI 188
>Medtr4g068900.1 | PPR containing plant-like protein | HC |
chr4:25858642-25860684 | 20130731
Length = 680
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 112/262 (42%), Gaps = 47/262 (17%)
Query: 68 NPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQY 127
N TV +NTLI+ + + + + A +L+ + + + ++ + T S+ C G H +
Sbjct: 224 NDTVS-WNTLIAGY-AQNGYMDKALALFVK-MTERGVRFDEHTLASVLSVCSGLKH-LKL 279
Query: 128 GPPLHAHVLK------------------------FLEPPY------DHFVQASLLNFYAK 157
G +HA VLK + E Y F +SL+ Y+
Sbjct: 280 GKCVHAWVLKNDYNSNQFISSGIVDLYCKCGNIRYAELVYAGIGIKSQFAVSSLIVGYSS 339
Query: 158 YGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMS 217
G + ++ LFD + E + W L L ++ E L
Sbjct: 340 QGEMMKAQRLFDSLLERNSVVWTALCSGYAKSQQCEEVFKLFRKFVTREELI-------- 391
Query: 218 RRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLA 277
P+ + ++ ++ AC+ LS G H Y+LR LK+++ + +A+VDMYSKCG + A
Sbjct: 392 ---PDAMIIIRVLGACATQATLSLGKQIHTYILRMRLKMDKKLLSAMVDMYSKCGNIMYA 448
Query: 278 CQLFDQLT--DRDTFCYNAMIG 297
+ F +T DRD YN MI
Sbjct: 449 EKSFQLMTDRDRDVILYNVMIA 470
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 27/172 (15%)
Query: 151 LLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDA----DL--- 203
L++ Y+K+G L + LFD+I P+ +WN L+ + D+ DL
Sbjct: 33 LIHLYSKHGLLKDAHKLFDEIPHPNAYSWNALIMAYIKAQNLTQARAVFDSAVDRDLVSY 92
Query: 204 -------------SLEALYLFCDMQMSRRRP--NEVTLVALISACSNLGALSQGVWTHCY 248
EA+ LF MQ +R +E +L +++ + L + G H Y
Sbjct: 93 NSMLSAYVGADGYETEAVDLFDKMQSARDMIGIDEFSLTTMVNFSAKLRLVCYGKQMHSY 152
Query: 249 LLRNNLKLNRFVGTALVDMYSKCGCLNLACQL---FDQLTDRDTFCYNAMIG 297
+++ L++F ++L++MYSKCG AC + FD + D NAM+
Sbjct: 153 MVKTASDLSKFASSSLINMYSKCGLFRDACSVVSGFDGVV--DLVSKNAMVA 202
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 125/286 (43%), Gaps = 28/286 (9%)
Query: 5 NPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHT-YCLSHLLT-ISSKLASTYALTI 62
N + I+ L KC ++ +A+++ G+ + + + +S L+ SS+ A +
Sbjct: 295 NQFISSGIVDLYCKCGNIR-----YAELVYAGIGIKSQFAVSSLIVGYSSQGEMMKAQRL 349
Query: 63 FSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSG 122
F S+ ++ L S + + S Q F L+ + + + L P++ + AC
Sbjct: 350 FDSLLERNSVVWTALCSGY-AKSQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACATQA 408
Query: 123 HWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPD--LATWN 180
G +H ++L+ + D + +++++ Y+K G + + F +++ D + +N
Sbjct: 409 T-LSLGKQIHTYILR-MRLKMDKKLLSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILYN 466
Query: 181 TLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALS 240
++ +A+ LF DM +P+ VT VAL+SAC + G +
Sbjct: 467 VMIAGYAHH------------GFENKAIQLFHDMLKKNVKPDAVTFVALLSACRHRGLVE 514
Query: 241 QGVWTHCYLLRNNL--KLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
QG + ++ ++N + +VDMY + L A + ++
Sbjct: 515 QGEIFFISMEDYSVLPEINHY--ACMVDMYGRANQLEKALEFMRKI 558
>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:8840204-8842727 | 20130731
Length = 623
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 138/292 (47%), Gaps = 32/292 (10%)
Query: 16 LQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLY 74
L+ S++ + +HA ++ + + L++ K+ T A +F +P +
Sbjct: 55 LKSSSSVSICRIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSW 114
Query: 75 NTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC-----CGSGHWFQYGP 129
N+L+S + Q+ S++ ++ + L+ N FTF S+ AC C G++
Sbjct: 115 NSLVSGL-AKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYY----- 168
Query: 130 PLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQI--SEPDLATWNTLLXXXX 187
+H +K L Y+ V +L+N Y K+G + + LF ++ SE + +WN+++
Sbjct: 169 -VHCCAMK-LGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCA 226
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSN--LGALSQGVWT 245
+ EA F M+++ P++ T+V+L+ AC N LG + + +
Sbjct: 227 QN------------GMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVL-- 272
Query: 246 HCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
H + L N + T L+++YSK G LN + ++F++++ D + AM+
Sbjct: 273 HGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLA 324
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 126/281 (44%), Gaps = 32/281 (11%)
Query: 28 VHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFSSIPN--PTVFLYNTLISSFTSH 84
VH + GL ++ L+ + K A +FS +P ++ +N++++ +
Sbjct: 169 VHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVA-VCAQ 227
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHA-HVLKFLEPPY 143
+ + AF+ ++ + + P+ T SL +AC F G + H + F
Sbjct: 228 NGMPNEAFNCFDMMRVNGFF-PDDATMVSLLQAC----ENFPLGRMVEVLHGVIFTCGLD 282
Query: 144 DHF-VQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDAD 202
++ + +LLN Y+K GRL SR +F++IS+PD W +L +
Sbjct: 283 ENLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERI 342
Query: 203 LSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG-----VWTHCYLLRNNLKLN 257
+ E + P+ VT L+SACS+ G + +G V + Y ++ +L+
Sbjct: 343 VREEGM-----------EPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQP--RLD 389
Query: 258 RFVGTALVDMYSKCGCLNLACQLFDQLT-DRDTFCYNAMIG 297
+ + +VD+ +CG L+ A +L + + ++ + A++G
Sbjct: 390 HY--SCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLG 428
>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:13924435-13921068 | 20130731
Length = 598
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 114/261 (43%), Gaps = 36/261 (13%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A+ +F +P V +NT++++ +H +I A L+N + + ++ ++
Sbjct: 114 AMDLFGRMPERNVVSWNTVMTAL-AHCGRIDDAERLFNEMRERDVV-----SWTTMVAGL 167
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQ-ASLLNFYAKYGRLCVSRCLFDQISEPDLA 177
+G + F P + V +++ YA+ GR + LF+++ E D+
Sbjct: 168 SKNGR-------VDDARDVFDRMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMP 220
Query: 178 TWNTLLXXXXXXXXXXXXXXLEDA-------------------DLSLEALYLFCDMQMSR 218
+WNT++ L A LS EAL LF MQ +
Sbjct: 221 SWNTMVTGFIQNGDLNRAEKLFHAMPKKNVITWTAMMTGYVQHGLSEEALKLFNKMQAND 280
Query: 219 R-RPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLA 277
+P T V ++ ACS+L L +G H + + + + +V +AL++MYSKCG ++A
Sbjct: 281 GLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVA 340
Query: 278 CQLFDQLTDR--DTFCYNAMI 296
++FD D +N MI
Sbjct: 341 KKMFDDGLSGHMDLIAWNGMI 361
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 22/231 (9%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A +F ++P V + +++ + H A L+N++ A+ L+P + TF ++ AC
Sbjct: 238 AEKLFHAMPKKNVITWTAMMTGYVQHGLS-EEALKLFNKMQANDGLKPTTGTFVTVLGAC 296
Query: 119 CGSGHWFQYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQ--ISEP 174
G +H + K F E Y V ++L+N Y+K G V++ +FD
Sbjct: 297 SDLAG-LPEGQQIHQMISKTVFQESTY---VVSALINMYSKCGDFHVAKKMFDDGLSGHM 352
Query: 175 DLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACS 234
DL WN ++ EA+ LF MQ + N+VT V L++ACS
Sbjct: 353 DLIAWNGMIAAYAHHGYGN------------EAIILFNKMQELGFQANDVTYVGLLTACS 400
Query: 235 NLGALSQGVWTHCYLLRNN-LKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
+ G +G LL+N +++ T L+D+ + G L+ A + + L
Sbjct: 401 HAGLFDEGFKYFDELLKNRYMQVREDHYTCLIDLCGRAGRLDEALNIIEGL 451
>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:45010556-45008657 | 20130731
Length = 512
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 80/157 (50%), Gaps = 12/157 (7%)
Query: 141 PPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLED 200
P + +L+N Y K ++ +R +FD +SE ++ +W ++
Sbjct: 199 PQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRF-------- 250
Query: 201 ADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFV 260
++AL LF M + RPN T +++ AC+ +L G+ H ++++ + +
Sbjct: 251 ----VDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIW 306
Query: 261 GTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
T+LVDMY+KCG ++ A +F+ + D++ +NA+IG
Sbjct: 307 LTSLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIG 343
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 21/241 (8%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKT-LQPNSFTFPSLFKA 117
A ++F + V + +IS + + + A L+ +L KT +PN FTF S+ A
Sbjct: 222 ARSVFDDMSERNVVSWTAMISGYVQNKRFVD-ALKLF--VLMFKTETRPNHFTFSSVLDA 278
Query: 118 CCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLA 177
C GS G LH ++K D SL++ YAK G + + +F+ I + +L
Sbjct: 279 CAGSSSLIM-GLQLHPCIIKS-GIANDVIWLTSLVDMYAKCGDMDAAFGVFESIRDKNLV 336
Query: 178 TWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLG 237
+WN ++ L+ AL F M++ P+EVT V ++SAC + G
Sbjct: 337 SWNAIIGGYASH------------GLATRALEEFDRMKVV-GTPDEVTFVNVLSACVHAG 383
Query: 238 ALSQGVWTHCYLL-RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLT-DRDTFCYNAM 295
+ +G +L + ++ + +VD+Y + G + A L + + D + A+
Sbjct: 384 LVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENLIKNMPFEPDVVLWGAL 443
Query: 296 I 296
+
Sbjct: 444 L 444
>Medtr7g082550.1 | PPR containing plant-like protein | HC |
chr7:31648795-31646693 | 20130731
Length = 487
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 85/180 (47%), Gaps = 17/180 (9%)
Query: 119 CGSGHWFQYGPPLH--AHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDL 176
CGS F G H A + F+ Y V +SL++ Y++ G L + +FD++S ++
Sbjct: 118 CGSKRDFYGGIQYHCLAIRIGFIANVY---VGSSLISLYSRCGLLGDAYRVFDEMSVRNV 174
Query: 177 ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
+W ++ D+ LE LF M+ +PN T +L+SAC
Sbjct: 175 VSWTAIIAGFAQEWR---------VDMCLE---LFRRMRGLELKPNYFTYTSLLSACMGS 222
Query: 237 GALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
GAL G HC +++ V AL+ MYSKCG + A +F+ + +D +N+MI
Sbjct: 223 GALGHGRGVHCQIIQMGFHCYLHVENALIAMYSKCGVIVDALYIFENMVSKDVVTWNSMI 282
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 117/273 (42%), Gaps = 41/273 (15%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSK---LASTYALTIFSSIPNPTVFLYNTLISSFTS 83
Q H + G + Y S L+++ S+ L Y +F + V + +I+ F +
Sbjct: 129 QYHCLAIRIGFIANVYVGSSLISLYSRCGLLGDAY--RVFDEMSVRNVVSWTAIIAGF-A 185
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPY 143
++ + L+ R+ + L+PN FT+ SL AC GSG +G +H +++ Y
Sbjct: 186 QEWRVDMCLELFRRMRGLE-LKPNYFTYTSLLSACMGSGA-LGHGRGVHCQIIQMGFHCY 243
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
H V+ +L+ Y+K G + + +F+ + D+ TWN+++
Sbjct: 244 LH-VENALIAMYSKCGVIVDALYIFENMVSKDVVTWNSMI-------------------- 282
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTA 263
M++ P+ VT + ++S+C + G + +G ++ + L+ +
Sbjct: 283 --------VGMRIMGVNPDAVTFLGILSSCRHGGLVKEGQVYFSSMVDHGLQPELDHYSC 334
Query: 264 LVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+VD+ + G L A + C NA+I
Sbjct: 335 IVDLLGRAGLLLEALDFIQNM----PVCPNAVI 363
>Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15020896-15019352 | 20130731
Length = 514
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 114/253 (45%), Gaps = 29/253 (11%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYN--RILAHKTLQPNSFTFPSLFK 116
AL++F + + L SS S +Q + R + + +PN T SL
Sbjct: 35 ALSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLS 94
Query: 117 ACCGSGHWFQYGPPLHAHVLKFL------EPPYDHFVQASLLNFYAKYGRLCVSRCLFDQ 170
C G +G H + +KF+ + D +L++ YAK L V+R +FD+
Sbjct: 95 GCASVGALL-HGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDE 153
Query: 171 I--SEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRR--RPNEVTL 226
I + D+ TW ++ DA+ AL LF +M PN+ T+
Sbjct: 154 ICPKDRDVVTWTVMIGGYAQYG---------DAN---HALQLFSEMFKFDNCIVPNDFTI 201
Query: 227 VALISACSNLGALSQGVWTHCYLLRNNLKLNR---FVGTALVDMYSKCGCLNLACQLFDQ 283
++ AC+ L AL G H Y+LR + +++ FV L+DMYSK G ++ A +FD
Sbjct: 202 SCVLMACARLAALRFGKQIHAYVLRRS-RIDSDVLFVANCLIDMYSKSGDVDTAQVVFDS 260
Query: 284 LTDRDTFCYNAMI 296
++ R+ + +++
Sbjct: 261 MSKRNAISWTSLL 273
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 25/161 (15%)
Query: 150 SLLNFYAKYGRLCVSRCLFDQISEP----DLATWNTLLXXXXXXXXXXXXXXLEDADLSL 205
+++ Y++ GR + LF ++ E D+ TW++++
Sbjct: 21 AMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYAQRG------------FGC 68
Query: 206 EALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLR------NNLKLNRF 259
EA+ +F M RPN VTL++L+S C+++GAL G THCY ++ +N +
Sbjct: 69 EAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGEHNDDNDDL 128
Query: 260 VG-TALVDMYSKCGCLNLACQLFDQL--TDRDTFCYNAMIG 297
G AL+DMY+KC L +A +FD++ DRD + MIG
Sbjct: 129 AGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIG 169
>Medtr8g028890.1 | PPR containing plant-like protein | HC |
chr8:11200768-11198782 | 20130731
Length = 655
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 129/283 (45%), Gaps = 20/283 (7%)
Query: 19 CHSLNTLK---QVHAQMLTTGLALHTYCLSHLLTISSKLA-STYALTIFSSIPNPTVFLY 74
C N ++ Q+H + G L + L+ + +K A +F + + ++
Sbjct: 177 CTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMW 236
Query: 75 NTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSG-HWFQYGPPLHA 133
N ++S + +S AF ++N + + + FTF SL ++ +G +H+
Sbjct: 237 NVMVSCYV-FNSLPEEAFRVFNS-MRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHS 294
Query: 134 HVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXX 193
VL+ D V ++L+N YAK + +R +FD++S ++ WNT++
Sbjct: 295 LVLR-QSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHG--- 350
Query: 194 XXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNN 253
D + E + L +M P+E+T+ ++IS+C A+++ + H + ++ +
Sbjct: 351 ------DGN---EVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAVKLS 401
Query: 254 LKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ V +L+ YSKCG + A + F+ + D + ++I
Sbjct: 402 CQDFLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLI 444
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 128 GPPLHAHVLKFLEPPYDHF-----VQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTL 182
G LHAH++KF F +Q +L+ Y K ++ LF+++ ++ +WN +
Sbjct: 79 GKQLHAHLIKF------GFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIM 132
Query: 183 LXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG 242
+ E + + L Y F M + P+ +T LI C+ + G
Sbjct: 133 IRASVGRNDEN-----ESSGMRLCFSY-FRRMLLEMMVPDHITFNGLICLCTQFNDIEMG 186
Query: 243 VWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
V HC+ ++ L+ FVG ALV +Y+KCG + A ++F ++ RD +N M+
Sbjct: 187 VQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMV 240
>Medtr3g088825.1 | PPR containing plant-like protein | HC |
chr3:40650693-40652499 | 20130731
Length = 555
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 46/273 (16%)
Query: 17 QKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFSSIPNPTVFLYNT 76
+ C + LK A +L T + ++ C ++ A IF ++PN T+ +N+
Sbjct: 316 EACELFDELKVYDAILLNTMITVYCNC--------GRIED--AKGIFQTMPNKTLISWNS 365
Query: 77 LISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVL 136
+++ T FS N + ++ + F+F S+ AC + G + +
Sbjct: 366 ILALDT---------FSRMNML----DVKMDKFSFASVISACAIKSS-LELGEQVFGKAI 411
Query: 137 KFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXX 196
L D + SL++FY K G + + R +FD + D +WNT+L
Sbjct: 412 T-LGLESDQIIYTSLVDFYCKCGIVEMGRKVFDGMIRTDEVSWNTMLMGYATN------- 463
Query: 197 XLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQG-----VWTHCYLLR 251
+EAL LF +M+ S RP+ +T ++SAC + G + +G H Y +
Sbjct: 464 -----GYGIEALTLFNEMEYSGVRPSAITFNGVLSACDHCGLVEEGRNLFRTMKHEYDI- 517
Query: 252 NNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
N + + + +VD++++ GC A + +++
Sbjct: 518 -NPGIEHY--SCMVDLFARAGCFGEAMYVIEEM 547
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 131/300 (43%), Gaps = 29/300 (9%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
I+ L KC L+ + ++ + + + LS L++ + + A +F + +P
Sbjct: 172 IVNLYGKCGDLD----IAVWVVGFVMDVDDFSLSALVSGYANAGRMSDARRVFDNKVDPC 227
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
L+N++IS + S+ ++ A L+N++ ++ F + + S F+
Sbjct: 228 SVLWNSIISGYVSNGEEME-ALDLFNQM--RRSGVRGEFPAVANILSAASSLLNFELVKQ 284
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
+H H K + +D V ++LL+ Y+K + LFD++ D NT++
Sbjct: 285 MHDHAFK-IGATHDIVVASTLLDAYSKCQHSHEACELFDELKVYDAILLNTMITVYCNCG 343
Query: 191 XXXXXXXLEDADL--------------SLEALYLFCDMQMSRRRPNEVTLVALISACSNL 236
+EDA S+ AL F M M + ++ + ++ISAC+
Sbjct: 344 R------IEDAKGIFQTMPNKTLISWNSILALDTFSRMNMLDVKMDKFSFASVISACAIK 397
Query: 237 GALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+L G + L+ ++ + T+LVD Y KCG + + ++FD + D +N M+
Sbjct: 398 SSLELGEQVFGKAITLGLESDQIIYTSLVDFYCKCGIVEMGRKVFDGMIRTDEVSWNTML 457
>Medtr5g031630.1 | PPR containing plant-like protein, putative | HC
| chr5:13562181-13560603 | 20130731
Length = 504
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
D FV +++ Y K+G++ ++ +FD++ + D+ + L+ L
Sbjct: 23 DGFVATGIVDMYTKFGKMKDAQFVFDRVLDKDVVLFTALIVGY------------NQHGL 70
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTA 263
EAL +F +M R +PNE TL +++ +C NLG L G H ++++ L+ T+
Sbjct: 71 DGEALEVFEEMVGRRVKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVIASQTS 130
Query: 264 LVDMYSKCGCLNLACQLFDQLT 285
L+ MYSKC + + ++F+QL+
Sbjct: 131 LLTMYSKCSMVEDSIKVFNQLS 152
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 124/304 (40%), Gaps = 38/304 (12%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFSSI----- 66
+L + KC + +V Q+ A H C S ++ + AL++F +
Sbjct: 131 LLTMYSKCSMVEDSIKVFNQL---SYASHVTCTSFIVGLVQNGREEVALSMFREMIRCSI 187
Query: 67 -PNPTVFLYNTLISSFTS-HSSQIHLAFSLYNRILAH---KTLQPNSFTFPSLFKACC-- 119
PN +L ++ SQ+ + + K L+P + L CC
Sbjct: 188 SPNHFTYLVFFMLERVDQMEESQVKRGRGRPKKTIRETIRKDLEPTPLSGIRLVCCCCCS 247
Query: 120 -----GSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEP 174
S + G +HA +K + +V A+L++ Y K G + +R +FD ++E
Sbjct: 248 ILHACSSLAMLEAGEKIHAVTVKL---GGNKYVDAALIHLYGKCGNVEKARSVFDSLTEL 304
Query: 175 DLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACS 234
D+ + NT++ EAL LF ++ PN VT ++++ AC+
Sbjct: 305 DVVSINTMIYAYAQN------------GFGHEALELFKRLKKLGLEPNVVTFISILLACN 352
Query: 235 NLGALSQGVWTHCYLLRNN--LKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCY 292
N G + +G L+RNN ++L R T ++D+ + A L ++ + D +
Sbjct: 353 NAGLVEEGCQIFS-LIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGENPDVVQW 411
Query: 293 NAMI 296
++
Sbjct: 412 RTLL 415
>Medtr6g016020.1 | PPR containing plant-like protein | HC |
chr6:5715947-5718139 | 20130731
Length = 730
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 111/244 (45%), Gaps = 27/244 (11%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSF----TFPSL 114
A ++F + ++ +NT++S + + F ++L + L+ F +F ++
Sbjct: 161 AFSVFDDMKCKSLVTWNTMLSLLSCN------GFVEDVKVLFCELLRLGVFLSEGSFVAV 214
Query: 115 FKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQA--SLLNFYAKYGRLCVSRCLFDQIS 172
G YG +H + K +D +V A SL+ Y + LC + LF+Q+
Sbjct: 215 LSGIGGCEEDLSYGEQVHCLMTK---SGFDCYVNAVNSLIGVYVRCRALCSAERLFEQVP 271
Query: 173 EPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISA 232
++ +WN ++ + S AL ++ +M P++ T V +I +
Sbjct: 272 VQNVVSWNMIIDS------------MVKNGRSQMALEVYLNMLRRGLVPSQATFVGVIES 319
Query: 233 CSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCY 292
C L LS G H ++R+ + + VGTALVD Y+K L A FDQ+ +++ +
Sbjct: 320 CIGLRNLSCGECVHAKVIRSGFESDVVVGTALVDFYAKFEKLISAHYCFDQIEEKNVVSW 379
Query: 293 NAMI 296
NA++
Sbjct: 380 NALM 383
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 123/314 (39%), Gaps = 46/314 (14%)
Query: 13 LKLLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPN 68
+ +++ C L L + VHA+++ +G + L+ +K A F I
Sbjct: 314 VGVIESCIGLRNLSCGECVHAKVIRSGFESDVVVGTALVDFYAKFEKLISAHYCFDQIEE 373
Query: 69 PTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCG------SG 122
V +N L+ +++ S + L R + PN F+F ++ K+ G
Sbjct: 374 KNVVSWNALMLGYSNVCSSTSI---LLLREMFRSGCFPNEFSFSAVLKSSSVLDLRQLHG 430
Query: 123 HWFQYGPPLHAHVLKFLEPPYDH---------FVQA-----------SLLNFYAKYGRLC 162
+ G H +VL L Y+ FVQ + Y + G
Sbjct: 431 LVIRMGYENHEYVLSSLVVAYERNGLINEVLSFVQEFNNPLHVIPSNIIAGIYNRTGLYN 490
Query: 163 VSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPN 222
+ L PD+ +WN + E LF M + P+
Sbjct: 491 ETMKLLSLQERPDVVSWNIAISACARSNNYN------------EVFELFKRMHSAHVHPD 538
Query: 223 EVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFD 282
+ T V + AC+ + +L G H +++ N + FVG L+DMY KCG + + ++F+
Sbjct: 539 KYTFVTGLCACTKICSLDLGSSFHGLIVKTN-SCDTFVGNVLIDMYGKCGKIESSVKVFE 597
Query: 283 QLTDRDTFCYNAMI 296
++TDR+ + A+I
Sbjct: 598 EITDRNVITWTALI 611
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 18/167 (10%)
Query: 134 HVLKFLEPPYDH---FVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
H L PP + F+ +++ Y Y ++R LFD + + L ++N L+
Sbjct: 28 HALTITTPPIPNQSIFINNNIITSYISYNNFILARKLFDVMPQRTLVSYNALIKAYS--- 84
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
D++ EA L ++ + PN+ TL L+ C L L QG +
Sbjct: 85 --------RSGDVN-EAWRLVNELMVCGFGPNQYTLTGLL-CCEGL-KLFQGYQLFGLSV 133
Query: 251 RNNL-KLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+N + ++ FVG+AL+ + +CGCL+ A +FD + + +N M+
Sbjct: 134 KNGVFDVDAFVGSALLGFFGRCGCLDEAFSVFDDMKCKSLVTWNTML 180
>Medtr4g023510.1 | PPR containing plant-like protein | HC |
chr4:7953334-7955464 | 20130731
Length = 494
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 143/326 (43%), Gaps = 61/326 (18%)
Query: 4 QNPIFNHP--ILKLLQKCHS--LNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYA 59
QNP HP L LL S + L+Q+H+Q++T+ L H Y + LT
Sbjct: 26 QNPKPKHPQHFLSLLLNNPSPHYHFLQQLHSQIITSSL-FHHYPFHNNLT---------- 74
Query: 60 LTIFSSIPNPTVFLYNTLISSFT----SHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLF 115
++ L+N LI S++ H S +L N L H +L +SFT L
Sbjct: 75 ----------SLLLFNNLIRSYSLSLFPHESLKFFTHTLNN--LTH-SLSLDSFTLTFLA 121
Query: 116 KACCG--SGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISE 173
AC + H +G LH V K + FVQ LL+ Y+ +G L + +F ++ +
Sbjct: 122 HACANLDTTH---FGFHLHCIVCKMGFENHV-FVQTGLLHMYSNWGFLVDAAQVFGEMPD 177
Query: 174 PDLATWNTLLXXXXXXXXXXXXXXLEDA-------------------DLSLEALYLFCDM 214
+ TWN + + D + L+AL LF M
Sbjct: 178 RNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSVVSWTLVIDGYTRMNKPLKALALFRKM 237
Query: 215 -QMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLK-LNRFVGTALVDMYSKCG 272
++ PNEVTL+ + A ++LG + H Y+ + ++ + AL+D+Y+KCG
Sbjct: 238 IEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVEKRGFNAVDIRIVNALIDLYAKCG 297
Query: 273 CLNLACQLFDQLTD--RDTFCYNAMI 296
C+ A LF ++ D R++ +N+++
Sbjct: 298 CIESASGLFSEMPDWRRNSVSWNSVM 323
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 89/190 (46%), Gaps = 20/190 (10%)
Query: 58 YALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKA 117
+A ++F + +V + +I +T + + A +L+ +++ ++PN T ++F A
Sbjct: 198 FARSVFDRMVVRSVVSWTLVIDGYTRMNKPLK-ALALFRKMIEVDGIEPNEVTLLTVFPA 256
Query: 118 CCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDL- 176
G+ + +H +V K D + +L++ YAK G + + LF ++ PD
Sbjct: 257 IAHLGN-VKMCESVHGYVEKRGFNAVDIRIVNALIDLYAKCGCIESASGLFSEM--PDWR 313
Query: 177 ---ATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISAC 233
+WN+++ + EA+ F M+ + RPN V ++++SAC
Sbjct: 314 RNSVSWNSVMSGYATF------------GMVREAVDTFEKMEKAGVRPNHVAFLSILSAC 361
Query: 234 SNLGALSQGV 243
S+ G + +G+
Sbjct: 362 SHSGLVEEGL 371
>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:24165948-24164077 | 20130731
Length = 550
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 96 NRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHF--VQASLLN 153
N I H L+ ++ L + S Q G LHA + Y F + ++L+
Sbjct: 17 NAIFNHHFLRSEPESYAKLIETYTHS-RSLQQGKKLHALLTT---NGYVRFNLIASNLIT 72
Query: 154 FYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCD 213
Y G+L ++R LFD+I + ++ W L+ AL +F +
Sbjct: 73 LYTTCGQLSIARKLFDKIPQTNIHRWIALIATCAR------------CGFHDHALEVFSE 120
Query: 214 MQ-MSRRRPNEVTLV-ALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKC 271
MQ ++ ++ N V ++ +++ AC ++G G HC +L+ + +++ FV +AL+ MYSKC
Sbjct: 121 MQTLNDQKSNSVFVIPSVLKACGHVGDRIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKC 180
Query: 272 GCLNLACQLFDQLTDRDTFCYNAMI 296
G + A ++FD + +D NA++
Sbjct: 181 GEVRDARKVFDGMVVKDLVAMNAVV 205
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 104/242 (42%), Gaps = 28/242 (11%)
Query: 4 QNPIFNHPIL--------KLLQK---CHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISS 52
+N IFNH L KL++ SL K++HA + T G S+L+T+ +
Sbjct: 16 KNAIFNHHFLRSEPESYAKLIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYT 75
Query: 53 KLAS-TYALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNS-FT 110
+ A +F IP + + LI++ H A +++ + + NS F
Sbjct: 76 TCGQLSIARKLFDKIPQTNIHRWIALIATCARCGFHDH-ALEVFSEMQTLNDQKSNSVFV 134
Query: 111 FPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQ 170
PS+ KAC G YG +H VLK D FV ++L+ Y+K G + +R +FD
Sbjct: 135 IPSVLKACGHVGDRI-YGEQVHCLVLK-CSFEIDAFVSSALIVMYSKCGEVRDARKVFDG 192
Query: 171 ISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALI 230
+ DL N ++ L EAL L +M++ PN VT ALI
Sbjct: 193 MVVKDLVAMNAVVSGYA------------QQGLPNEALSLVENMKLMGVNPNVVTWNALI 240
Query: 231 SA 232
S
Sbjct: 241 SG 242
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 149 ASLLNFYAKYGRLCVS---RCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSL 205
A + F K R VS R + + EPD+ +W ++L E+A +
Sbjct: 238 ALISGFAQKCDREMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQNFRN------EEAFDAF 291
Query: 206 EALYL--FCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTA 263
+ + L FC P T+ AL+ AC+ + G H Y L ++ + +V +A
Sbjct: 292 KKMLLLGFC--------PTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSA 343
Query: 264 LVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
LVDMY+KCG ++ A LF ++ +++T N+MI
Sbjct: 344 LVDMYAKCGFISEARTLFYKMPEKNTVTMNSMI 376
>Medtr2g072010.1 | PPR containing plant-like protein | HC |
chr2:30162883-30164901 | 20130731
Length = 515
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 108/252 (42%), Gaps = 27/252 (10%)
Query: 58 YALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKA 117
YA +F +P V ++ +I + F + + ++ NS T + K
Sbjct: 122 YARKLFDRMPERNVVSWSAMIDGYM-EKGLFENGFGFFLEMRREGVVEVNSTTMTIMIKG 180
Query: 118 CCGSGHWFQYGPPLHAHV----LKFLEPPYDHFVQ---------ASLLNFYAKYGRLCVS 164
C G + G +H V +F++ Y+ F + +++ + GR+
Sbjct: 181 CGNCGG-VKDGMQIHGLVSRLGFEFVDAAYEVFERMPEKDLISWTAMIRRFVTDGRMGKP 239
Query: 165 RCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEV 224
LFD + E D W L+ EAL + M +PN +
Sbjct: 240 VELFDTLKEKDDFVWTVLISGFVSNEEYE------------EALCWYVRMNREGCKPNPL 287
Query: 225 TLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQL 284
T+ ++++A ++L AL++G+ H ++L+ NL+ + + +L+ Y+KCG + A ++F +
Sbjct: 288 TISSVLAASASLVALNEGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDV 347
Query: 285 TDRDTFCYNAMI 296
+ + N++I
Sbjct: 348 VELNVVSNNSVI 359
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 21/229 (9%)
Query: 60 LTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACC 119
+ +F ++ F++ LIS F S+ + A Y R + + +PN T S+ A
Sbjct: 240 VELFDTLKEKDDFVWTVLISGFVSNE-EYEEALCWYVR-MNREGCKPNPLTISSVL-AAS 296
Query: 120 GSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATW 179
S G +H+HVLK + YD +Q SL++FYAK G + + +F + E ++ +
Sbjct: 297 ASLVALNEGLQIHSHVLK-MNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVELNVVSN 355
Query: 180 NTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGAL 239
N+++ EAL ++ MQ PN VT +A++SAC++ G +
Sbjct: 356 NSVING------------FTQNGFGEEALNMYKRMQNESLEPNRVTFLAVLSACTHAGLI 403
Query: 240 SQG---VWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLT 285
+G T RN + + +VD+ + G L+ A L +T
Sbjct: 404 EEGRNLFDTMKSRYRNEPDADHY--ACMVDLLGRAGLLDEANDLIRSIT 450
>Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38635968-38632937 | 20130731
Length = 694
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 125/296 (42%), Gaps = 32/296 (10%)
Query: 15 LLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
L+Q C N++ KQ+H+ + T+G + + +HLL SK A+ +F +P
Sbjct: 84 LIQSCIPTNSVSLGKQLHSLIFTSGYSSDKFISNHLLNFYSKFGELNNAVKLFDRMPRRN 143
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
N +I ++ + I A +L++ + + N T+ ++ G +
Sbjct: 144 YMSCNIMIKAYLEMGN-IENAKNLFDEMT-----ERNVATWNAMVTGLVKFGLNEEALLF 197
Query: 131 LHAHVLKFLEPPYD---------HFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNT 181
+VL F+ Y H S+ + + R R + + +L WNT
Sbjct: 198 SRMNVLGFVPDEYSFGSVLRGCAHLRALSVGDRFTLMLRNVGER-IIKWMPNCNLVAWNT 256
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
L+ L +C M+M+ RP+ +T V++IS+CS L L Q
Sbjct: 257 LMAGKAQNRCFDG------------VLDHYCMMKMAGYRPDRITFVSVISSCSELATLCQ 304
Query: 242 GVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMIG 297
G H +++ V ++LV MYSKCG L + + F + +RD +++MI
Sbjct: 305 GKQIHAEVIKAGASSVVTVISSLVSMYSKCGSLQDSIKAFLECEERDVVLWSSMIA 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 29/223 (13%)
Query: 62 IFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTL------QPNSFTFPSLF 115
I +PN + +NTL++ + ++ +L H + +P+ TF S+
Sbjct: 242 IIKWMPNCNLVAWNTLMAGKAQNRC--------FDGVLDHYCMMKMAGYRPDRITFVSVI 293
Query: 116 KACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPD 175
+C Q G +HA V+K + +SL++ Y+K G L S F + E D
Sbjct: 294 SSCSELATLCQ-GKQIHAEVIKAGASSVVTVI-SSLVSMYSKCGSLQDSIKAFLECEERD 351
Query: 176 LATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSN 235
+ W++++ +A+ LF D + NEVT ++L+ ACS+
Sbjct: 352 VVLWSSMIAAYGFHGQCE------------KAIKLFNDKEKENMAGNEVTFLSLLYACSH 399
Query: 236 LGALSQGV-WTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLA 277
G +G+ + + + LK T +VD+ + GCL A
Sbjct: 400 SGLKDKGLDFFDMMVEKYGLKARLEHYTCVVDLLGRSGCLEEA 442
>Medtr2g028240.1 | PPR containing plant-like protein | HC |
chr2:10416867-10418417 | 20130731
Length = 516
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 114/275 (41%), Gaps = 28/275 (10%)
Query: 26 KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSH 84
KQ+H+QM+ TG T + LL + S+ S +L +F + + V +NTL+S F
Sbjct: 78 KQLHSQMIKTGSDSGTVPKTALLDMYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSCFLRC 137
Query: 85 SSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYD 144
L R + + ++ + FT S+ K CC S ++G +H V+
Sbjct: 138 GKPDEAIRVL--REMGRENVEMSEFTLCSVLK-CCASLKALEFGRQVHGLVVAMGRDLV- 193
Query: 145 HFVQASLLNFYAKYGRLCVSRCL---FDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDA 201
+ +L++FY+ G CV L + D N+L+
Sbjct: 194 -VLSTALIDFYSSVG--CVHHALNVFYGLKGWKDDMIHNSLVSGCIKNGRYR-------- 242
Query: 202 DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVG 261
EA + MS +PN V L +++ CS L G HC +R +
Sbjct: 243 ----EAFKV-----MSLVKPNAVALTSVLVCCSEESDLLTGKQVHCVAVRQGFTFETQLC 293
Query: 262 TALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
L+DMY+KCG + A +FD + +D + MI
Sbjct: 294 NVLLDMYAKCGKILQAWSVFDGIFQKDVISWTCMI 328
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 22/223 (9%)
Query: 75 NTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAH 134
N+LI+S+ I AF+L+ L + +S TF L + S G LH+
Sbjct: 31 NSLITSYIRRGHPIS-AFNLFLS-LRRIRIDLDSHTFTPLLRPSPTS-----LGKQLHSQ 83
Query: 135 VLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXX 194
++K + +LL+ Y+++G L S +FD++ D+ WNTLL
Sbjct: 84 MIK-TGSDSGTVPKTALLDMYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSCFLRCGKPD- 141
Query: 195 XXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNL 254
EA+ + +M +E TL +++ C++L AL G H ++
Sbjct: 142 -----------EAIRVLREMGRENVEMSEFTLCSVLKCCASLKALEFGRQVHGLVVAMGR 190
Query: 255 KLNRFVGTALVDMYSKCGCLNLACQLFDQLTD-RDTFCYNAMI 296
L + TAL+D YS GC++ A +F L +D +N+++
Sbjct: 191 DL-VVLSTALIDFYSSVGCVHHALNVFYGLKGWKDDMIHNSLV 232
>Medtr3g096440.1 | PPR containing plant-like protein | HC |
chr3:44085648-44087691 | 20130731
Length = 580
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 141/350 (40%), Gaps = 80/350 (22%)
Query: 15 LLQKCHSLNTLKQ---VHAQMLTTGLALHTYCLSHLLTISSKLASTYAL-TIFSSIPNPT 70
L+ C S +LK +H+Q++ T L T+ + L+ + SK ++ F +PN T
Sbjct: 17 LISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLPNKT 76
Query: 71 VFLYNTLISSFTSHSSQIHLAFSL-----------YNRILA-------HKT--------- 103
+NTL+S F S + A+ L YN +++ HK
Sbjct: 77 TRTWNTLLS-FYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFREMQ 135
Query: 104 -----LQPNSFTFPSLFK--ACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYA 156
L + FT SL +C + W + +H V + + + +L++ Y
Sbjct: 136 NGVGGLMLDEFTLVSLVSNCSCLDTVKWLR---QVHG-VATIVGFRTNLILNNALIDAYG 191
Query: 157 KYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDA--------------- 201
K G S CLF + E D +W +++ ++DA
Sbjct: 192 KCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASR------IDDACKVFNEMPVKYTVSW 245
Query: 202 ----------DLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLR 251
EAL +F M P T V+++ AC++ + +G HC ++R
Sbjct: 246 AALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIR 305
Query: 252 ----NNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTD-RDTFCYNAMI 296
+NL N +V AL+DMY+KCG + A LF+ + +D +N +I
Sbjct: 306 GRSSDNL-FNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLI 354
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 21/242 (8%)
Query: 5 NPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTYALTIFS 64
N I N+ ++ KC N+ + M+ T S ++T + A +F+
Sbjct: 179 NLILNNALIDAYGKCGEPNSSFCLFRSMVEKDAVSWT---SMVVTYTRASRIDDACKVFN 235
Query: 65 SIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHW 124
+P + LIS F + + + A ++++++ L P + TF S+ AC S
Sbjct: 236 EMPVKYTVSWAALISGFVKNG-RCYEALEVFHQMIKEGVL-PRAQTFVSVLDACA-SEAL 292
Query: 125 FQYGPPLHAHVLKFLEPP--YDHFVQASLLNFYAKYGRLCVSRCLFDQ-ISEPDLATWNT 181
G +H +++ ++ +V +L++ YAK G + + LF+ I D+ +WNT
Sbjct: 293 IGRGKQVHCQIIRGRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNT 352
Query: 182 LLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQ 241
L+ ++L +F M S PN VT + ++SAC++ G ++
Sbjct: 353 LITGFAQNGRGE------------DSLAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNA 400
Query: 242 GV 243
G+
Sbjct: 401 GL 402
>Medtr3g117620.1 | PPR containing plant-like protein | HC |
chr3:55081139-55078984 | 20130731
Length = 493
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 125/277 (45%), Gaps = 27/277 (9%)
Query: 18 KCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNT 76
K +N KQ+HA + +G + + S L+ SKL + A +F IP+ N
Sbjct: 115 KFKDVNFGKQIHAHVEKSGWSSSVFVGSALIDFYSKLLNVKDAALVFDEIPDRNTVCANA 174
Query: 77 LISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVL 136
L+S + + AF L ++ K L+ + FT + +AC G + G LH+++L
Sbjct: 175 LLSGYCEFGLWVK-AFELIRKMPLLK-LKYDHFTLSAALRACTGLSS-VEMGRQLHSYLL 231
Query: 137 KFL-EPPYDHFVQASLLNFYAKYGRLCVSRCLFD-------QISEPDLATWNTLLXXXXX 188
+ + + D F+Q++L+ Y K G + ++ +F + D+ W ++L
Sbjct: 232 RTMADIESDVFLQSTLIEMYGKCGMVEKAQLVFKLDGMDIRKERSRDVVFWTSMLGVYGK 291
Query: 189 XXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCY 248
E + L+ +M +P+ ++ + +ISAC + G + GV +
Sbjct: 292 NGHYK------------EVIDLYSEMLREGIKPDGISFLTIISACGHTGQVDAGV-KYFE 338
Query: 249 LLRNNLKLNRFVG--TALVDMYSKCGCLNLACQLFDQ 283
+ N+ KL+ + LVD+ + G LN A +L ++
Sbjct: 339 SMTNDFKLDPGPEHYSCLVDLLCRAGELNKAWELLNE 375
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 129/297 (43%), Gaps = 39/297 (13%)
Query: 20 HSLNTLKQVHAQMLTTGL-----ALHTYCLSHLLTI-SSKLASTYALTIFSSIPNPTVFL 73
++L+++K++HA +LT G LHT +S + S T + F + +
Sbjct: 11 NNLSSIKKLHAHLLTKGTLFILHDLHTQLISTYTSFFPSNNLQTLTNSFFKCMNSTNPLH 70
Query: 74 YNTLISSFTSHS----SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGP 129
+N +IS F + +F N + ++ T S FK +G
Sbjct: 71 FNVIISHFCRKGFPFLALTTFSFMHTNHVPLDTYALCSTLTASSKFKDV-------NFGK 123
Query: 130 PLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXX 189
+HAHV K FV ++L++FY+K + + +FD+I + + N LL
Sbjct: 124 QIHAHVEKS-GWSSSVFVGSALIDFYSKLLNVKDAALVFDEIPDRNTVCANALLSGYC-- 180
Query: 190 XXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYL 249
+ L ++A L M + + + + TL A + AC+ L ++ G H YL
Sbjct: 181 ----------EFGLWVKAFELIRKMPLLKLKYDHFTLSAALRACTGLSSVEMGRQLHSYL 230
Query: 250 LRN--NLKLNRFVGTALVDMYSKCGCLNLACQLFD-------QLTDRDTFCYNAMIG 297
LR +++ + F+ + L++MY KCG + A +F + RD + +M+G
Sbjct: 231 LRTMADIESDVFLQSTLIEMYGKCGMVEKAQLVFKLDGMDIRKERSRDVVFWTSMLG 287
>Medtr3g408390.1 | PPR containing plant-like protein | HC |
chr3:1481664-1484476 | 20130731
Length = 392
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 70/131 (53%), Gaps = 18/131 (13%)
Query: 174 PD--LATWNTLLXXXXXXXXXXXXXXLEDADL--SLEALYLFCDMQM---SRRRPNEVTL 226
PD + TWN ++ L+D + ++ L LF +M M S RPN+ T+
Sbjct: 2 PDRNVVTWNAMITGYCS---------LKDGNEKNAVNGLCLFKEMLMVGGSEVRPNDTTV 52
Query: 227 VALISACSNLGALSQGVWTHCYLLRNNLKL--NRFVGTALVDMYSKCGCLNLACQLFDQL 284
V L+SA S LG + GV H + ++ K+ + F+GT LVDMYSKCGCL A +F ++
Sbjct: 53 VCLLSAASQLGMVEIGVCLHGFAVKVLCKVEDDVFIGTGLVDMYSKCGCLESALSVFRRM 112
Query: 285 TDRDTFCYNAM 295
R+ + AM
Sbjct: 113 KWRNVLTWTAM 123
>Medtr2g071810.1 | PPR containing plant-like protein | HC |
chr2:30002268-30006207 | 20130731
Length = 789
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 104/221 (47%), Gaps = 19/221 (8%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKAC 118
A+ +F ++ F++ LIS F S+ + A + R ++ + +PN T S+ A
Sbjct: 373 AVELFDTLKEKDDFVWTVLISGFVSNE-EYEEALHWFVR-MSREQCRPNPLTISSVLSAS 430
Query: 119 CGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLAT 178
G +H+HVLK + YD +Q SL++FYAK G + + +F + EP++ +
Sbjct: 431 ASLVA-LNEGLQIHSHVLK-MNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVEPNVVS 488
Query: 179 WNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGA 238
+N+++ EAL ++ MQ PN VT +A++SAC++ G
Sbjct: 489 YNSVING------------FAQNGFGEEALSMYKRMQNESLEPNRVTFLAVLSACTHAGL 536
Query: 239 LSQGVWTHCYLLRNNLKLNRFVG--TALVDMYSKCGCLNLA 277
+ +G W +++ + +VD+ + G L+ A
Sbjct: 537 IEEG-WNLFNTMKSRYGIEPEADHYACMVDLLGRAGLLDEA 576
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 121/286 (42%), Gaps = 56/286 (19%)
Query: 12 ILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAST-YALTIFSSIPNPT 70
++K C + Q+H + G + + ++T+ S T A +FS + N
Sbjct: 263 MIKGCGNCGRVKEGIQIHGLVSRLGFEFGSVLSNTIITMYSLFGYTDMAKKVFSGMGNKD 322
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPP 130
+ +N+LIS + +++++ A+ ++ R+
Sbjct: 323 LVTWNSLISGYI-YNNEVDAAYEVFERM-------------------------------- 349
Query: 131 LHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXX 190
P D +++ +A GR+ + LFD + E D W L+
Sbjct: 350 ----------PEKDLISWTAMIRGFATDGRIGKAVELFDTLKEKDDFVWTVLISGFVSNE 399
Query: 191 XXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLL 250
EAL+ F M + RPN +T+ +++SA ++L AL++G+ H ++L
Sbjct: 400 EYE------------EALHWFVRMSREQCRPNPLTISSVLSASASLVALNEGLQIHSHVL 447
Query: 251 RNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ NL+ + + +L+ Y+KCG + A ++F + + + YN++I
Sbjct: 448 KMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVEPNVVSYNSVI 493
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 107/272 (39%), Gaps = 51/272 (18%)
Query: 57 TYALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLY------NRI------------ 98
T A +F +P T YN +IS + + + A+ L+ N +
Sbjct: 78 TTARKLFDEMPERTTATYNAMISGYIRNGCNVTKAYELFTSFHDRNEVSYAAMIMGLVKA 137
Query: 99 ----LAHKTLQ--PNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLE----PPYDHFVQ 148
LA K + P+ F P A + + G A L+ E D
Sbjct: 138 RKFDLAEKLYREAPHEFRDPVCSNALING--YLKIGEMNEA--LRVFENVGVSKRDVVSW 193
Query: 149 ASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEAL 208
++++ + GR+ +R LFD++ E ++ +W+ ++ + L
Sbjct: 194 SAVVGGLCRDGRIDNARMLFDRMPERNVVSWSAMIDGYM------------EKGLFENGF 241
Query: 209 YLFCDMQMSRRRP----NEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTAL 264
LF DM RR N T+ +I C N G + +G+ H + R + + +
Sbjct: 242 GLFLDM---RREGVVEVNSTTMTIMIKGCGNCGRVKEGIQIHGLVSRLGFEFGSVLSNTI 298
Query: 265 VDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
+ MYS G ++A ++F + ++D +N++I
Sbjct: 299 ITMYSLFGYTDMAKKVFSGMGNKDLVTWNSLI 330
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 7/160 (4%)
Query: 27 QVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPTVFLYNTLISSFTSHS 85
Q+H+ +L L + L++ +K + T A IF + P V YN++I+ F +
Sbjct: 441 QIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVEPNVVSYNSVINGFAQNG 500
Query: 86 SQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKF-LEPPYD 144
A S+Y R + +++L+PN TF ++ AC +G + + ++ +EP D
Sbjct: 501 FG-EEALSMYKR-MQNESLEPNRVTFLAVLSACTHAGLIEEGWNLFNTMKSRYGIEPEAD 558
Query: 145 HFVQASLLNFYAKYGRLCVSRCLFDQIS-EPDLATWNTLL 183
H+ A +++ + G L + + EP W LL
Sbjct: 559 HY--ACMVDLLGRAGLLDEAIHFVRSMPLEPHSGVWGALL 596
>Medtr1g052100.1 | PPR containing plant-like protein | HC |
chr1:20983048-20985397 | 20130731
Length = 733
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 18/198 (9%)
Query: 99 LAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKY 158
+ + ++P++FT+ SL A Q +H+ + K + V +L++ Y++
Sbjct: 381 MRREGIEPDAFTYGSLLSA----SDSLQMVEMIHSVLCKNGLNKVE--VLNALISSYSRN 434
Query: 159 GRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSR 218
G++ + +F ++ L +WN+++ ++ L F + +
Sbjct: 435 GQIKRAFQIFSDLAYKSLISWNSIISGFVLN------------GYPMQGLEKFSALLNTH 482
Query: 219 RRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLAC 278
+PN +L +S CS + G H Y+LR+ +G ALV MYSKCG L+ +
Sbjct: 483 LKPNAYSLSLALSICSCTPDMDHGKQVHGYILRHGFDSEISLGNALVTMYSKCGFLDRSL 542
Query: 279 QLFDQLTDRDTFCYNAMI 296
+F+++ +RDT +NA+I
Sbjct: 543 SVFNEMVERDTITWNAII 560
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 139/308 (45%), Gaps = 43/308 (13%)
Query: 1 MKAQNPIFNHPILKLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYA 59
+KA + + N +L L K H L +++ V + + Y + +L+ S+L+ YA
Sbjct: 86 LKAYSHVAN-SLLSLYAKAHDLVSVELVFDDIQCPDV----YSWTTVLSAISRLSDIDYA 140
Query: 60 LTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACC 119
L +F +P V ++N +I+ + + + +AF L + ++ +++TF ++ C
Sbjct: 141 LHVFDKMPKCYVAVWNAIITGCSDNGCE-DVAFRLLKDMF-RMNVRGDNYTFATMLSLCP 198
Query: 120 GSGHWFQYGPPLHAHVLK--FLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEP--D 175
S YG +H+ V+K FL+ V SL+ Y G + +F+++ +
Sbjct: 199 LS-EGLDYGRHVHSVVVKSGFLDWTS---VVNSLITMYFNCGCVVDGYKVFEEMEGGVRN 254
Query: 176 LATWNTLLXXXXXXXXXXXXXXLEDADLSLE----ALYLFCDMQMSRRRPNEVTLVALIS 231
T+N ++ D +S+E A +F DM +EVT V+++S
Sbjct: 255 HVTYNAMI----------------DGFVSVERFEDAFLMFRDMHRGSVCLSEVTFVSVLS 298
Query: 232 ACSNL--GALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTD-RD 288
+C +L G +QG+ +N A + MYS G +N A +F+ + + RD
Sbjct: 299 SCCSLRVGCQAQGLAIKMGFDCGYTAVN----NATMTMYSFFGKVNEARSVFEIMEESRD 354
Query: 289 TFCYNAMI 296
+N M+
Sbjct: 355 LVSWNVMV 362
>Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21517672-21518970 | 20130731
Length = 432
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 154 FYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCD 213
YAK G++ +R +F+ + E D+ + ++ L EAL LF
Sbjct: 1 MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQL------------GLDEEALELFRR 48
Query: 214 MQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGC 273
+Q + N VT +++A S L AL G H ++LR+ + + +L+DMYSKCG
Sbjct: 49 LQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGN 108
Query: 274 LNLACQLFDQLTDRDTFCYNAMI 296
L + ++FD + +R +NAM+
Sbjct: 109 LTYSRRIFDTMYERTVISWNAML 131
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 23/189 (12%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHL---AFSLYNRILAHKTLQPNSFTFPSLF 115
A T+F +P V +IS + +Q+ L A L+ R L + ++ N T+ +
Sbjct: 11 ARTVFECLPERDVVSCTAIISGY----AQLGLDEEALELFRR-LQGEGMKSNYVTYTGVL 65
Query: 116 KACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPD 175
A G G +H HVL+ E P +Q SL++ Y+K G L SR +FD + E
Sbjct: 66 TALSGLAA-LDLGKQVHNHVLRS-EIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERT 123
Query: 176 LATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDM-QMSRRRPNEVTLVALISACS 234
+ +WN +L E L LF M + ++ +P+ VT++A++S CS
Sbjct: 124 VISWNAMLVGYSKHGE------------GREVLKLFTLMREETKVKPDSVTILAVLSGCS 171
Query: 235 NLGALSQGV 243
+ G +G+
Sbjct: 172 HGGLEDKGL 180
>Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:26513420-26510735 | 20130731
Length = 659
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 150 SLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLEALY 209
L+ YA G ++R +FD++S+ ++ +N ++ + L
Sbjct: 58 KLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYD------------DGLL 105
Query: 210 LFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYS 269
+F +M RP+ T ++ ACS L G+ H +L+ L N FVG L+ MY
Sbjct: 106 VFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYG 165
Query: 270 KCGCLNLACQLFDQLTDRDTFCYNAMIG 297
KCGCL A ++FD++ +D +N+M+
Sbjct: 166 KCGCLFEARRVFDEMIWKDVVSWNSMVA 193
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 114/270 (42%), Gaps = 50/270 (18%)
Query: 28 VHAQMLTTGLALHTYCLSHLLTISSKLASTY-ALTIFSSIPNPTVFLYNTLISSFTSHSS 86
+H +L GL + + + L+ + K + A +F + V +N++++ + +H+
Sbjct: 141 IHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGY-AHNM 199
Query: 87 QIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPYDHF 146
+ A + R + +P+ T SL A + +VL +
Sbjct: 200 RFDDALEIC-REMEDYGQKPDGCTMASLMPAVANTSS---------ENVL---------Y 240
Query: 147 VQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADLSLE 206
V+ +N K +L +WN ++ L +
Sbjct: 241 VEKIFVNLERK-----------------NLISWNVMIRVYMKNS------------LPTQ 271
Query: 207 ALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTALVD 266
A+ L+ M+ R P+ +T +++ AC +L AL G H Y+ + L N + +L+D
Sbjct: 272 AVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLID 331
Query: 267 MYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
MY++CGCL+ A ++FD++ RD + ++I
Sbjct: 332 MYARCGCLDDAKRVFDRMKFRDVASWTSLI 361
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 106/232 (45%), Gaps = 35/232 (15%)
Query: 14 KLLQKCHSLNTLKQVHAQMLTTGLALHTYCLSHL-LTISSKLASTYAL--------TIFS 64
K L + + TLK++H + Y SH ++ KL +YA +F
Sbjct: 26 KALDQNPDIKTLKKLHTMIF--------YLNSHQNPSLGIKLMRSYAACGEPGLTRKVFD 77
Query: 65 SIPNPTVFLYNTLISSFTS-HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGH 123
+ + V YN +I S+ + H L L R + + +P+++T+P + KAC S +
Sbjct: 78 EMSDRNVVFYNVMIRSYVNNHRYDDGL---LVFREMVNGGFRPDNYTYPCVLKACSCSEN 134
Query: 124 WFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLL 183
+YG +H VLK + ++ FV L+ Y K G L +R +FD++ D+ +WN+++
Sbjct: 135 -LRYGLLIHGDVLK-VGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMV 192
Query: 184 XXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSN 235
+AL + +M+ ++P+ T+ +L+ A +N
Sbjct: 193 AGYAHNMRFD------------DALEICREMEDYGQKPDGCTMASLMPAVAN 232
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 17/228 (7%)
Query: 58 YALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKA 117
Y IF ++ + +N +I + +S A LY ++ + ++P++ TF S+ A
Sbjct: 240 YVEKIFVNLERKNLISWNVMIRVYMKNSLPTQ-AVDLYLQMEKCR-VEPDAITFASVLPA 297
Query: 118 CCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLA 177
C G G +H +V K P + ++ SL++ YA+ G L ++ +FD++ D+A
Sbjct: 298 C-GDLSALLLGRRIHEYVEKKKLCP-NLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVA 355
Query: 178 TWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLG 237
+W +L+ A+ LF +M S + P+ + VA++SACS+ G
Sbjct: 356 SWTSLISAYGMTGQ------------GCNAVALFTEMLNSGQAPDSIAFVAILSACSHSG 403
Query: 238 ALSQGVWTHCYLLRNNLKLNRFVGTA-LVDMYSKCGCLNLACQLFDQL 284
L +G + + R A LVD+ + G ++ A + Q+
Sbjct: 404 LLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQM 451
>Medtr3g088835.1 | PPR containing plant-like protein | HC |
chr3:40655233-40657665 | 20130731
Length = 629
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 24/241 (9%)
Query: 59 ALTIFSSIPNPTVFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFP---SLF 115
A +F +P V +NT+IS + S H A ++ + ++P+ FTF SL
Sbjct: 100 ACYMFDEMPVRDVVSWNTMISGYASCGFSSH-ALGVFVE-MQGAGVRPSGFTFSILTSLV 157
Query: 116 KACCGSGHWFQYGPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPD 175
+ C + +H +++ + + SL+ Y K+ + + + + D
Sbjct: 158 SSSCRA-------KEVHGMMIRSGMELSNVVIGNSLIAMYGKFDLVDYCFGVILSMKQLD 210
Query: 176 LATWNTLLXXXXXXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSN 235
+WN+L+ +L+LE FC M+ + P+E T L+S CSN
Sbjct: 211 FISWNSLIWACHRAGR---------QELALEQ---FCCMKAAELLPDEFTCSTLMSVCSN 258
Query: 236 LGALSQGVWTHCYLLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDTFCYNAM 295
L L +G + + N V +A +D++SKC L A +LF++ D+ N+M
Sbjct: 259 LRDLEKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDAVRLFEEQEQWDSALCNSM 318
Query: 296 I 296
I
Sbjct: 319 I 319
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 119/273 (43%), Gaps = 18/273 (6%)
Query: 26 KQVHAQMLTTGLALHTYCLSH-LLTISSKLA-STYALTIFSSIPNPTVFLYNTLISSFTS 83
K+VH M+ +G+ L + + L+ + K Y + S+ +N+LI +
Sbjct: 164 KEVHGMMIRSGMELSNVVIGNSLIAMYGKFDLVDYCFGVILSMKQLDFISWNSLIWACHR 223
Query: 84 HSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWFQYGPPLHAHVLKFLEPPY 143
Q LA + + A + L P+ FT +L C + G + A K + Y
Sbjct: 224 AGRQ-ELALEQFCCMKAAELL-PDEFTCSTLMSVCSNLRD-LEKGKQVFAFCFK-VGFVY 279
Query: 144 DHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXXXXXXXXXXXXLEDADL 203
+ V ++ ++ ++K RL + LF++ + D A N+++ DL
Sbjct: 280 NSIVSSAAIDLFSKCNRLEDAVRLFEEQEQWDSALCNSMISCYARH------------DL 327
Query: 204 SLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHCYLLRNNLKLNRFVGTA 263
+AL LF RP + T+ L+S+ S + G H + + + + V +
Sbjct: 328 GEDALQLFMPTLRKNIRPTKYTVSCLLSSVSIFLPVEVGNQIHALVHKFGFESDSVVTNS 387
Query: 264 LVDMYSKCGCLNLACQLFDQLTDRDTFCYNAMI 296
LVDMY+K G ++ A +F+++ +D +N ++
Sbjct: 388 LVDMYAKFGFIDNALNIFNEIKTKDLVSWNTIM 420
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 117/283 (41%), Gaps = 27/283 (9%)
Query: 15 LLQKCHSLNTL---KQVHAQMLTTGLALHTYCLSHLLTISSKLAS-TYALTIFSSIPNPT 70
L+ C +L L KQV A G ++ S + + SK A+ +F
Sbjct: 252 LMSVCSNLRDLEKGKQVFAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDAVRLFEEQEQWD 311
Query: 71 VFLYNTLISSFTSHSSQIHLAFSLYNRILAHKTLQPNSFTFPSLFKACCGSGHWF---QY 127
L N++IS + H A L+ L K ++P +T L S F +
Sbjct: 312 SALCNSMISCYARHDLG-EDALQLFMPTL-RKNIRPTKYTVSCLLS----SVSIFLPVEV 365
Query: 128 GPPLHAHVLKFLEPPYDHFVQASLLNFYAKYGRLCVSRCLFDQISEPDLATWNTLLXXXX 187
G +HA V KF D V SL++ YAK+G + + +F++I DL +WNT++
Sbjct: 366 GNQIHALVHKF-GFESDSVVTNSLVDMYAKFGFIDNALNIFNEIKTKDLVSWNTIMMGLS 424
Query: 188 XXXXXXXXXXLEDADLSLEALYLFCDMQMSRRRPNEVTLVALISACSNLGALSQGVWTHC 247
+ LF +++ P+ +TL A++ AC+ + +G+
Sbjct: 425 YNGKVCV------------TMDLFEELRREGMPPDRITLAAVLLACNYGNLVDEGIKIFS 472
Query: 248 YL-LRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDQLTDRDT 289
+ + +K + +V+M + G L A + +++ + T
Sbjct: 473 QMEMEFGVKPEEEHYSYVVEMLCRAGNLKEAVDIVEKMPYKTT 515