Miyakogusa Predicted Gene
- Lj6g3v1164020.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1164020.1 tr|G7JPD2|G7JPD2_MEDTR DEAD-box ATP-dependent RNA
helicase OS=Medicago truncatula GN=MTR_4g059460
PE,81.76,0,DEAD_ATP_HELICASE,RNA helicase, ATP-dependent, DEAD-box,
conserved site; DEAD-like helicases superfa,CUFF.59177.1
(614 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like prote... 929 0.0
Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like prote... 922 0.0
Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like prote... 764 0.0
Medtr4g459350.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 381 e-105
Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like prote... 275 1e-73
Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like prote... 273 5e-73
Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like prote... 215 1e-55
Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like prote... 202 1e-51
Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like prote... 202 1e-51
Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 197 3e-50
Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 196 5e-50
Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like prote... 196 8e-50
Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family pro... 192 7e-49
Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family pro... 191 1e-48
Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family pro... 187 3e-47
Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 185 1e-46
Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like prote... 185 1e-46
Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like prote... 185 1e-46
Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 181 3e-45
Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 180 4e-45
Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 179 1e-44
Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like prote... 178 2e-44
Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family pro... 178 2e-44
Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 177 3e-44
Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 177 3e-44
Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 177 3e-44
Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 174 2e-43
Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 174 2e-43
Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like prote... 174 3e-43
Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC | ch... 169 5e-42
Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC | ch... 169 5e-42
Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC | ch... 169 5e-42
Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC | ch... 169 5e-42
Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC | ch... 169 5e-42
Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC | ch... 169 5e-42
Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC | ch... 169 5e-42
Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC | ch... 169 5e-42
Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC | ch... 169 5e-42
Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC | c... 169 5e-42
Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like prote... 169 6e-42
Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 169 1e-41
Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 159 9e-39
Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like prote... 159 9e-39
Medtr8g027780.2 | DEAD-box ATP-dependent RNA helicase family pro... 153 5e-37
Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 153 5e-37
Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like prote... 153 5e-37
Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like prote... 152 7e-37
Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like prote... 152 7e-37
Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 151 1e-36
Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 150 3e-36
Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 150 3e-36
Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 149 5e-36
Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 144 2e-34
Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like prote... 144 2e-34
Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like prote... 144 3e-34
Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 144 3e-34
Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 141 2e-33
Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 140 3e-33
Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 140 3e-33
Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 135 9e-32
Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 135 2e-31
Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like prote... 135 2e-31
Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like prote... 132 8e-31
Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 132 9e-31
Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like prote... 132 9e-31
Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like prote... 132 1e-30
Medtr4g105100.5 | DEAD-box ATP-dependent RNA helicase-like prote... 131 2e-30
Medtr4g105100.3 | DEAD-box ATP-dependent RNA helicase-like prote... 131 2e-30
Medtr4g105100.4 | DEAD-box ATP-dependent RNA helicase-like prote... 131 2e-30
Medtr4g105100.2 | DEAD-box ATP-dependent RNA helicase-like prote... 131 2e-30
Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 130 5e-30
Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 126 7e-29
Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 125 1e-28
Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 125 1e-28
Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 125 1e-28
Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like prote... 125 2e-28
Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 125 2e-28
Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 122 7e-28
Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like prote... 121 2e-27
Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 119 8e-27
Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 114 3e-25
Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC | chr... 112 1e-24
Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC | chr... 112 1e-24
Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC | chr... 112 1e-24
Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC | chr... 112 1e-24
Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC | chr... 112 1e-24
Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 108 1e-23
Medtr3g118120.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 105 9e-23
Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 103 5e-22
Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like prote... 100 4e-21
Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 100 6e-21
Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC | sc... 98 3e-20
Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like prote... 94 4e-19
Medtr4g077370.1 | DEAD-box helicase family protein | LC | chr4:2... 92 1e-18
Medtr8g032230.1 | DEAD-box helicase family protein | HC | chr8:1... 82 2e-15
Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 80 7e-15
Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 80 8e-15
Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 78 2e-14
Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 78 3e-14
Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 73 6e-13
Medtr0279s0040.1 | DEAD-box ATP-dependent RNA helicase-like prot... 72 1e-12
Medtr3g107420.4 | DEAD-box ATP-dependent RNA helicase-like prote... 68 3e-11
Medtr3g107420.3 | DEAD-box ATP-dependent RNA helicase-like prote... 68 3e-11
Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like prote... 66 1e-10
Medtr1g009617.1 | DEAD-box ATP-dependent RNA helicase-like prote... 62 1e-09
Medtr6g040070.1 | DEAD/DEAH-box helicase | HC | chr6:14397151-14... 60 5e-09
Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 60 9e-09
Medtr1g023070.1 | DEAD-box ATP-dependent RNA helicase, putative ... 59 2e-08
Medtr1g023070.3 | DEAD-box ATP-dependent RNA helicase, putative ... 59 2e-08
Medtr1g023070.2 | DEAD-box ATP-dependent RNA helicase, putative ... 58 3e-08
Medtr1g023070.4 | DEAD-box ATP-dependent RNA helicase, putative ... 58 3e-08
Medtr8g079452.1 | helicase family carboxy-terminal domain protei... 57 6e-08
Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC | s... 55 3e-07
Medtr2g461560.1 | DEAD-box ATP-dependent RNA helicase, putative ... 50 6e-06
>Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:21899223-21892509 | 20130731
Length = 613
Score = 929 bits (2401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/581 (77%), Positives = 496/581 (85%), Gaps = 1/581 (0%)
Query: 32 NGSCGDNSVFAXXXXXXXXXXXXXCDQLRDRLGFEAPTLVQAQAIPVILSGRHALVNAAT 91
N +N+VFA CDQLR+R+GFEAPTL+QAQAIPV+LSGRHALVNAAT
Sbjct: 31 NKGDNNNNVFASCSFSSLGLHQTLCDQLRERMGFEAPTLIQAQAIPVVLSGRHALVNAAT 90
Query: 92 GTGKTIAYLAPIIHYLQSYDNRIQRSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVP 151
GTGKTIAYLAPIIH+LQSYD R+QRSDGTFALVLVPTRELCLQV+EIL KLLHRFHWIVP
Sbjct: 91 GTGKTIAYLAPIIHHLQSYDKRVQRSDGTFALVLVPTRELCLQVHEILQKLLHRFHWIVP 150
Query: 152 GYIMGGENRSKEKARLRKGISILIATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELG 211
GYIMGGE+RSKEKARLRKGISILIATPGRLLDHLK TSSFVYTNLRWIIFDEADRILELG
Sbjct: 151 GYIMGGESRSKEKARLRKGISILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILELG 210
Query: 212 FGKDIEEILDLLGSTRTGCDDQENAVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVM 271
FGK+I+EIL+LLGS +TG DDQE+ VP SK QRQNLLLSATLNEKVNHLAKISLE+PVM
Sbjct: 211 FGKEIQEILNLLGSMKTGHDDQESGVPRPSKFQRQNLLLSATLNEKVNHLAKISLEDPVM 270
Query: 272 IGLDDKSIEPISTTASLDHAEPDEDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLP 331
IG+DDK +EP S D+++ DED+E+ +S KIP +G YKVP QLIQR++KVPCGSRL
Sbjct: 271 IGIDDKIMEPTSRI-RFDNSDCDEDNEDTHSSKIPAIGAYKVPEQLIQRYMKVPCGSRLA 329
Query: 332 VLLSILKHLFEREPSQKVVVFFSTCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKIL 391
+LLSILKHLFEREPSQKVV+FFSTCDAVDFHYSL+ F FSSYPQ EEG++ MFLGCK L
Sbjct: 330 ILLSILKHLFEREPSQKVVLFFSTCDAVDFHYSLITEFLFSSYPQTEEGNRTMFLGCKTL 389
Query: 392 HLHGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRV 451
LHGNMEQE+R TSFQAFKTE SALLLSTDVSARGLDFP VRCIIQYD PGEATEYVHRV
Sbjct: 390 RLHGNMEQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRV 449
Query: 452 GRTARLGEKGESLLFLQPIERDYLQDLEKHGVSLTEYPLLKVLDYFPLHGQSKHLKKSVF 511
GRTARLGE+GESLLFLQP E DYLQDLEKHGVSL EYPLLKVLD FPL ++KKSVF
Sbjct: 450 GRTARLGERGESLLFLQPSEIDYLQDLEKHGVSLVEYPLLKVLDSFPLSAHKNNIKKSVF 509
Query: 512 IDSHPWVLCLQKALESFITSKPKLDELAKRAFCSWVRAYTAYXXXXXXXXXXXXXXXXXV 571
ID HPW++CLQKALES I+SKPK++ELAKRAFCSWVRAYTA+ V
Sbjct: 510 IDMHPWIMCLQKALESCISSKPKMEELAKRAFCSWVRAYTAHRGELKRIFMVKKLHLGHV 569
Query: 572 AKSFALKQQPSLVGKSFQKQIKKRKRYEKNNGLSNKRKVAR 612
AKSF LKQ PSLVGKSFQ Q KKRKR+EK NG SNKRKVAR
Sbjct: 570 AKSFGLKQIPSLVGKSFQNQTKKRKRFEKKNGPSNKRKVAR 610
>Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890321-18881902 | 20130731
Length = 610
Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/575 (78%), Positives = 491/575 (85%), Gaps = 1/575 (0%)
Query: 38 NSVFAXXXXXXXXXXXXXCDQLRDRLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTI 97
++VFA CDQLR+R+GFE PTLVQAQAIPV+LSGRHALVNAATGTGKTI
Sbjct: 34 SNVFASCSFSSLGLHQTLCDQLRERMGFEGPTLVQAQAIPVVLSGRHALVNAATGTGKTI 93
Query: 98 AYLAPIIHYLQSYDNRIQRSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGG 157
AYLAPIIH+LQSYD RIQRSDGTFALVLVPTRELCLQV+EIL KLLHRFHWIVPGYIMGG
Sbjct: 94 AYLAPIIHHLQSYDKRIQRSDGTFALVLVPTRELCLQVHEILQKLLHRFHWIVPGYIMGG 153
Query: 158 ENRSKEKARLRKGISILIATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIE 217
E+RSKEKARLRKGISILIATPGRLLDHLK TSSFVYTNLRWIIFDEADRILELGFGK+I+
Sbjct: 154 ESRSKEKARLRKGISILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQ 213
Query: 218 EILDLLGSTRTGCDDQENAVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDK 277
EIL+LLGS +TG DDQ N VP +K QRQNLLLSATLNEKVNHLAKISLE+PVMIG+DDK
Sbjct: 214 EILNLLGSMKTGHDDQGNGVPRPTKFQRQNLLLSATLNEKVNHLAKISLEDPVMIGIDDK 273
Query: 278 SIEPISTTASLDHAEPDEDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSIL 337
+EP S D+++ DED+E YS KIP VG YKVP QLIQR++KVPCGSRL +LLSIL
Sbjct: 274 VLEPTSKI-RFDNSDCDEDNEGTYSSKIPAVGAYKVPEQLIQRYMKVPCGSRLAILLSIL 332
Query: 338 KHLFEREPSQKVVVFFSTCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNM 397
KHLFEREPSQK+V+FFSTCDAVDFHYSLL F FS++PQ EEG++ MFLGCK L LHGNM
Sbjct: 333 KHLFEREPSQKIVLFFSTCDAVDFHYSLLTEFLFSAFPQTEEGNRPMFLGCKTLRLHGNM 392
Query: 398 EQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARL 457
EQE+R TSFQAFKTE SALLLSTDVSARGLDFP VRCIIQYD PGEATEYVHRVGRTARL
Sbjct: 393 EQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTARL 452
Query: 458 GEKGESLLFLQPIERDYLQDLEKHGVSLTEYPLLKVLDYFPLHGQSKHLKKSVFIDSHPW 517
GE+GESLLFLQP E +YLQDLEKHGVSL EYPLLKVLD FPL Q + KKSVFID HPW
Sbjct: 453 GERGESLLFLQPSEIEYLQDLEKHGVSLAEYPLLKVLDSFPLSAQKNNTKKSVFIDMHPW 512
Query: 518 VLCLQKALESFITSKPKLDELAKRAFCSWVRAYTAYXXXXXXXXXXXXXXXXXVAKSFAL 577
++CLQKALES I+SKPK++ELAKRAFCSWVRAYTA+ VAKSF L
Sbjct: 513 IMCLQKALESCISSKPKMEELAKRAFCSWVRAYTAHRGELKRIFMVKKLHLGHVAKSFGL 572
Query: 578 KQQPSLVGKSFQKQIKKRKRYEKNNGLSNKRKVAR 612
KQ PSLVGK+FQ Q KKRKR+EK NG SNKRKVAR
Sbjct: 573 KQIPSLVGKTFQNQTKKRKRFEKKNGSSNKRKVAR 607
>Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890320-18881902 | 20130731
Length = 492
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/478 (78%), Positives = 409/478 (85%), Gaps = 1/478 (0%)
Query: 135 VYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLDHLKKTSSFVYT 194
V+EIL KLLHRFHWIVPGYIMGGE+RSKEKARLRKGISILIATPGRLLDHLK TSSFVYT
Sbjct: 13 VHEILQKLLHRFHWIVPGYIMGGESRSKEKARLRKGISILIATPGRLLDHLKNTSSFVYT 72
Query: 195 NLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKTQRQNLLLSATL 254
NLRWIIFDEADRILELGFGK+I+EIL+LLGS +TG DDQ N VP +K QRQNLLLSATL
Sbjct: 73 NLRWIIFDEADRILELGFGKEIQEILNLLGSMKTGHDDQGNGVPRPTKFQRQNLLLSATL 132
Query: 255 NEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKYSGKIPTVGDYKVP 314
NEKVNHLAKISLE+PVMIG+DDK +EP S D+++ DED+E YS KIP VG YKVP
Sbjct: 133 NEKVNHLAKISLEDPVMIGIDDKVLEPTSKI-RFDNSDCDEDNEGTYSSKIPAVGAYKVP 191
Query: 315 VQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDFHYSLLKSFKFSSY 374
QLIQR++KVPCGSRL +LLSILKHLFEREPSQK+V+FFSTCDAVDFHYSLL F FS++
Sbjct: 192 EQLIQRYMKVPCGSRLAILLSILKHLFEREPSQKIVLFFSTCDAVDFHYSLLTEFLFSAF 251
Query: 375 PQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRC 434
PQ EEG++ MFLGCK L LHGNMEQE+R TSFQAFKTE SALLLSTDVSARGLDFP VRC
Sbjct: 252 PQTEEGNRPMFLGCKTLRLHGNMEQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRC 311
Query: 435 IIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEKHGVSLTEYPLLKVL 494
IIQYD PGEATEYVHRVGRTARLGE+GESLLFLQP E +YLQDLEKHGVSL EYPLLKVL
Sbjct: 312 IIQYDSPGEATEYVHRVGRTARLGERGESLLFLQPSEIEYLQDLEKHGVSLAEYPLLKVL 371
Query: 495 DYFPLHGQSKHLKKSVFIDSHPWVLCLQKALESFITSKPKLDELAKRAFCSWVRAYTAYX 554
D FPL Q + KKSVFID HPW++CLQKALES I+SKPK++ELAKRAFCSWVRAYTA+
Sbjct: 372 DSFPLSAQKNNTKKSVFIDMHPWIMCLQKALESCISSKPKMEELAKRAFCSWVRAYTAHR 431
Query: 555 XXXXXXXXXXXXXXXXVAKSFALKQQPSLVGKSFQKQIKKRKRYEKNNGLSNKRKVAR 612
VAKSF LKQ PSLVGK+FQ Q KKRKR+EK NG SNKRKVAR
Sbjct: 432 GELKRIFMVKKLHLGHVAKSFGLKQIPSLVGKTFQNQTKKRKRFEKKNGSSNKRKVAR 489
>Medtr4g459350.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:21843191-21840034 | 20130731
Length = 276
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/227 (81%), Positives = 201/227 (88%)
Query: 32 NGSCGDNSVFAXXXXXXXXXXXXXCDQLRDRLGFEAPTLVQAQAIPVILSGRHALVNAAT 91
N +N+VFA CDQLR+R+GFEAPTL+QAQAIPV+LSGRHALVNAAT
Sbjct: 28 NKGDNNNNVFASCSFSSLGLHQTLCDQLRERMGFEAPTLIQAQAIPVVLSGRHALVNAAT 87
Query: 92 GTGKTIAYLAPIIHYLQSYDNRIQRSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVP 151
GTGKTIAYLAPIIH+LQSYD R+QRSDGTFALVLVPTRELCLQV+EIL KLLHRFHWIVP
Sbjct: 88 GTGKTIAYLAPIIHHLQSYDKRVQRSDGTFALVLVPTRELCLQVHEILQKLLHRFHWIVP 147
Query: 152 GYIMGGENRSKEKARLRKGISILIATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELG 211
GYIMGGE+RSKEKARLRKGISILIATPGRLLDHLK TSSFVYTNLRWIIFDEADRILELG
Sbjct: 148 GYIMGGESRSKEKARLRKGISILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILELG 207
Query: 212 FGKDIEEILDLLGSTRTGCDDQENAVPGASKTQRQNLLLSATLNEKV 258
FGK+I+EIL+LLGS +TG DDQE+ VP SK QRQNLLLSATLNEK+
Sbjct: 208 FGKEIQEILNLLGSMKTGHDDQESGVPRPSKFQRQNLLLSATLNEKL 254
>Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:23956977-23948909 | 20130731
Length = 557
Score = 275 bits (703), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 188/544 (34%), Positives = 269/544 (49%), Gaps = 101/544 (18%)
Query: 63 LGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFA 122
+ F T +QA++IP +L G+ L A TG+GKT+A+L P + L Y+ + +GT
Sbjct: 108 MSFTHMTQIQAKSIPPLLMGKDVLGAARTGSGKTLAFLIPAVELL--YNVQFTPRNGTGV 165
Query: 123 LVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLL 182
+V+ PTREL +Q + + +L+ +H G ++GG R E R+ KG+++LIATPGRLL
Sbjct: 166 IVICPTRELAIQTHAVASELMKGYHSQTLGKVIGGVGRKGEAERIVKGVNLLIATPGRLL 225
Query: 183 DHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASK 242
DHL+ T F+Y NL+ ++ DEADRILE F +++++IL++L
Sbjct: 226 DHLQNTKGFIYKNLKCLMIDEADRILESNFEEEMKQILNIL------------------P 267
Query: 243 TQRQNLLLSATLNEKVNHLAKISLEN-PVMIGLDDKSIEPISTTASLDHAEPDEDSEEKY 301
+RQ L SAT +KV LA++S + PV + +D
Sbjct: 268 KKRQTALFSATQTKKVEDLARLSFQTPPVYVDVD-------------------------- 301
Query: 302 SGKIPTVGDYKVPVQ-LIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVD 360
+G KV V+ L Q +V VPC R VL S LK R S+KV+VFFS+C++V
Sbjct: 302 ------IGREKVTVEGLEQGYVVVPCAKRFVVLYSFLK----RYQSKKVMVFFSSCNSVK 351
Query: 361 FHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLST 420
FH LLK F+G L++HG +Q +R ++F F +LL T
Sbjct: 352 FHADLLK-----------------FIGLDCLNIHGKQKQNSRTSTFFNFCKAEKGILLCT 394
Query: 421 DVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTAR-LGEKGESLLFLQPIERDYLQDLE 479
DV+ARGLD P V I+Q+D P E EY+HRVGRTAR G KG +LLFL P E +L+ L+
Sbjct: 395 DVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLK 454
Query: 480 KHGVSLTEYPLLKVLDYFPLHGQSKHLKKSVFIDSHPWVLCLQKALESFITSKPKLDELA 539
V + EY K L +Q LE + S L+ LA
Sbjct: 455 AAKVPVKEYAF-----------DDKKLSN------------VQSQLEKMVASVYHLNTLA 491
Query: 540 KRAFCSWVRAYTAYXXXXXXXXXXXXXXXXXVAKSFALKQQPSLVGKSFQKQIKKRKRYE 599
K A+ S++ AY A+ VA SF P + K RK+ +
Sbjct: 492 KEAYRSYILAYNAH--SMKEIFNVHRLDLQAVATSFCFTNPPKISLNIDSSASKHRKKIQ 549
Query: 600 KNNG 603
K G
Sbjct: 550 KVEG 553
>Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46109502-46117199 | 20130731
Length = 583
Score = 273 bits (697), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 191/543 (35%), Positives = 271/543 (49%), Gaps = 105/543 (19%)
Query: 63 LGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFA 122
+GF+ T +QA+AIP +LSG+ L A TG+GKT+A+L P + L + + GT
Sbjct: 114 MGFQHLTQIQARAIPPLLSGKDVLGAARTGSGKTLAFLIPAVELLHKL--KFNQRSGTGV 171
Query: 123 LVLVPTRELCLQVYEILVKLL-HRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRL 181
+++ PTREL +Q +E+ KLL H H G ++GG R E L KGI+I++ATPGRL
Sbjct: 172 VIICPTRELAIQTHEVAQKLLKHHRHSQTLGLVIGGSARRTEAESLAKGINIVVATPGRL 231
Query: 182 LDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGAS 241
LDHL+ T F+Y NL+ +I DEADRILE F ++++I+ LL
Sbjct: 232 LDHLQNTKRFIYNNLKCLIIDEADRILEANFEDELKQIIKLLPKN--------------- 276
Query: 242 KTQRQNLLLSATLNEKVNHLAKISLE-NPVMIGLDDKSIEPISTTASLDHAEPDEDSEEK 300
RQ L SAT +KV LA++S + P+ I +DD
Sbjct: 277 ---RQTALFSATQTKKVEDLARLSFQTTPIYIDVDD------------------------ 309
Query: 301 YSGKIPTVGDYKVPVQ-LIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAV 359
G KV + L+Q +V VPC R VL S LK R S+KV+VFFS+C++V
Sbjct: 310 --------GRKKVTNEGLLQGYVVVPCAKRFMVLYSFLK----RHKSKKVMVFFSSCNSV 357
Query: 360 DFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLS 419
FH + + L C ++G +Q+ R T+F F +LL
Sbjct: 358 KFHADIF---------------NHIHLHCS--SIYGKQKQQTRTTTFVDFCQAEKGILLC 400
Query: 420 TDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGE--KGESLLFLQPIERDYLQD 477
TDV+ARGLD P V I+QYD P E EY+HRVGRTAR GE KG +LLFL P E +L+
Sbjct: 401 TDVAARGLDIPSVDWILQYDPPDEPKEYIHRVGRTAR-GEDGKGNALLFLIPEELQFLRY 459
Query: 478 LEKHGVSLTEYPLLKVLDYFPLHGQSKHLKKSVFIDSHPWVLCLQKALESFITSKPKLDE 537
L++ V + EY + KK I SH LE+ + L++
Sbjct: 460 LKEAKVPVKEYAYDE--------------KKVANIQSH---------LENLVAENYFLNK 496
Query: 538 LAKRAFCSWVRAYTAYXXXXXXXXXXXXXXXXXVAKSFALKQQPSL-VGKSFQKQIKKRK 596
+AK A+ S++ AY ++ VA SF P++ + + KQ KK +
Sbjct: 497 MAKEAYKSYILAYNSH--SSKDIFSVQRLDMQAVAASFCFSNPPNVSLNINMSKQRKKTR 554
Query: 597 RYE 599
R +
Sbjct: 555 RVD 557
>Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46124357-46130061 | 20130731
Length = 401
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 161/471 (34%), Positives = 225/471 (47%), Gaps = 103/471 (21%)
Query: 135 VYEILVKLL-HRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLDHLKKTSSFVY 193
+E+ KLL H H G ++GG R E L KGI+I++ATPGRLLDHL+ T F+Y
Sbjct: 2 THEVAQKLLKHHRHSQTLGLVIGGSARRTEAESLAKGINIVVATPGRLLDHLQNTKRFIY 61
Query: 194 TNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKTQRQNLLLSAT 253
NL+ +I DEADRILE F ++++I+ LL R Q L SAT
Sbjct: 62 NNLKCLIIDEADRILEANFEDELKQIIKLLPKNR------------------QTALFSAT 103
Query: 254 LNEKVNHLAKISLEN-PVMIGLDDKSIEPISTTASLDHAEPDEDSEEKYSGKIPTVGDYK 312
+KV LA++S + P+ I +DD G K
Sbjct: 104 QTKKVEDLARLSFQTTPIYIDVDD--------------------------------GRKK 131
Query: 313 VPVQ-LIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDFHYSLLKSFKF 371
V + L+Q +V VPC R VL S LK R S+KV+VFFS+C++V FH +
Sbjct: 132 VTNEGLLQGYVVVPCAKRFMVLYSFLK----RHKSKKVMVFFSSCNSVKFHADIFN---- 183
Query: 372 SSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDFPK 431
+ L C ++G +Q+ R T+F F +LL TDV+ARGLD P
Sbjct: 184 -----------HIHLHCS--SIYGKQKQQTRTTTFVDFCQAEKGILLCTDVAARGLDIPS 230
Query: 432 VRCIIQYDCPGEATEYVHRVGRTARLGE--KGESLLFLQPIERDYLQDLEKHGVSLTEYP 489
V I+QYD P E EY+HRVGRTAR GE KG +LLFL P E +L+ L++ V + EY
Sbjct: 231 VDWILQYDPPDEPKEYIHRVGRTAR-GEDGKGNALLFLIPEELQFLRYLKEAKVPVKEYA 289
Query: 490 LLKVLDYFPLHGQSKHLKKSVFIDSHPWVLCLQKALESFITSKPKLDELAKRAFCSWVRA 549
+ KK I SH LE+ + L+++AK A+ S++ A
Sbjct: 290 YDE--------------KKVANIQSH---------LENLVAENYFLNKMAKEAYKSYILA 326
Query: 550 YTAYXXXXXXXXXXXXXXXXXVAKSFALKQQPSL-VGKSFQKQIKKRKRYE 599
Y ++ VA SF P++ + + KQ KK +R +
Sbjct: 327 YNSH--SSKDIFSVQRLDMQAVAASFCFSNPPNVSLNINMSKQRKKTRRVD 375
>Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25903244-25908935 | 20130731
Length = 752
Score = 202 bits (513), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/495 (30%), Positives = 238/495 (48%), Gaps = 99/495 (20%)
Query: 57 DQLRDRLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQR 116
D+LR + F + T +Q ++P L GR L A TG+GKT+A++ P++ L Y R
Sbjct: 89 DELRSK--FVSMTDIQRASLPHALCGRDVLGAAKTGSGKTLAFIIPVLEKL--YRKRWGP 144
Query: 117 SDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIA 176
DG ++++ PT EL Q++ +L K + H G ++GG + +++LI
Sbjct: 145 EDGVGSIIISPTWELAGQIFAVL-KAIGCIHGFSAGLLIGGRQGVATEKECVNKLNVLIC 203
Query: 177 TPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENA 236
TPGRLL H+ +T +F + ++ ++ DEADRIL+ GF K++ NA
Sbjct: 204 TPGRLLQHMDETPNFDCSKMQVLVLDEADRILDSGFKKEL------------------NA 245
Query: 237 VPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDED 296
+ +RQ +L SAT + V LA++SL++P I + ++S+ TA+
Sbjct: 246 IISQLPKRRQTMLFSATQTKSVQDLARLSLKDPEYISVHEESV-----TAT--------- 291
Query: 297 SEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILK-HLFEREPSQKVVVFFST 355
P L Q+ + VP +L +L + +K HL K +VF S+
Sbjct: 292 -----------------PTLLKQKVMIVPLDQKLDMLWNFIKTHL-----KSKTLVFLSS 329
Query: 356 CDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSA 415
C V F + E K++ G + LHG M+QE R + F E +
Sbjct: 330 CKQVKFVF---------------EAFKKLHPGIPLKCLHGRMKQEKRMAIYSEF-CEKCS 373
Query: 416 LLLSTDVSARGLDFPK-VRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDY 474
+L +TDV+ARGLDF + V ++Q DCP Y+HRVGRTAR G+S+L+L P E
Sbjct: 374 ILFATDVAARGLDFNRAVDWVVQVDCPENVASYIHRVGRTARYKSLGKSVLYLLPSETKM 433
Query: 475 LQDLEKHGVSLTEYPLLKVLDYFPLHGQSKHLKKSVFIDSHPWVLCLQKALESFITSKPK 534
L+ LE V P+H K K+ + + L S + P+
Sbjct: 434 LEKLEAGKV--------------PVHYPPKPRKE--------LLQPVSSLLASLLVKYPE 471
Query: 535 LDELAKRAFCSWVRA 549
L + A+RAF +++R+
Sbjct: 472 LQQQAQRAFVTYLRS 486
>Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40427970-40421694 | 20130731
Length = 747
Score = 202 bits (513), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 151/488 (30%), Positives = 231/488 (47%), Gaps = 99/488 (20%)
Query: 65 FEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFALV 124
F + T +Q ++P L GR L A TG+GKT+A++ P++ L + R DG +++
Sbjct: 95 FVSMTKIQRASLPHALCGRDVLGAAKTGSGKTLAFIIPVLEKL--HRERWGTEDGVGSII 152
Query: 125 LVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLDH 184
+ PTREL Q++ +L + H G ++GG + ++ILI TPGRLL H
Sbjct: 153 ISPTRELAGQIFGVL-NAIGEHHRFSAGLLIGGGGDVAIEKECVNKLNILICTPGRLLQH 211
Query: 185 LKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKTQ 244
+ +T +F + ++ ++ DEADRIL+ GF K++ NA+ +
Sbjct: 212 MDETPNFDCSQMQVLVLDEADRILDSGFKKEV------------------NAIISQLPKR 253
Query: 245 RQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKYSGK 304
RQ +L SAT + V LA++SL++P I + ++S+ TA+
Sbjct: 254 RQTMLFSATQTKSVQDLARLSLKDPEYISVHEESV-----TAT----------------- 291
Query: 305 IPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDFHYS 364
P L Q + VP +L +L + +K R K +VF S+C V F +
Sbjct: 292 ---------PTLLKQTVMIVPLDQKLDMLWTFIK----RHLQSKTLVFLSSCKQVKFVFE 338
Query: 365 LLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDVSA 424
+ K +P I L C LHG M+QE R + F E ++L STDV+A
Sbjct: 339 VFKKL----HPGIP-------LKC----LHGRMKQEKRMAIYSEFCEEKRSVLFSTDVAA 383
Query: 425 RGLDFPK-VRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEKHGV 483
RGLDF K V ++Q DCP Y+HRVGRTAR G+S+LFL P E + L+ V
Sbjct: 384 RGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYNSVGKSVLFLLPSETMMHEKLKAAKV 443
Query: 484 SLTEYPLLKVLDYFPLHGQS--KHLKKSVFIDSHPWVLCLQKALESFITSKPKLDELAKR 541
P+H Q K L + V L S + P+L + A+R
Sbjct: 444 --------------PVHCQKPRKELLQPV-----------SSLLASLLVKYPELQQRAQR 478
Query: 542 AFCSWVRA 549
AF +++R+
Sbjct: 479 AFVTYLRS 486
>Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:18030127-18021965 | 20130731
Length = 747
Score = 197 bits (501), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 208/425 (48%), Gaps = 78/425 (18%)
Query: 63 LGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFA 122
LG+ PT +QA IP+ L+GR +A TG+GKT A+ P + L + R G A
Sbjct: 158 LGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERL------LFRPKGVHA 211
Query: 123 ---LVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPG 179
L+L PTREL +QV+ ++ +L I I+GG ++A LR I++ATPG
Sbjct: 212 IRVLILTPTRELAVQVHSMIEELAKFTDNIRCCLIVGGVPTKGQEAALRSRPDIVVATPG 271
Query: 180 RLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPG 239
R++DHL+ + S +L +I DEADR+LELGF +I+E++ + C
Sbjct: 272 RMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIQELVRV-------C--------- 315
Query: 240 ASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEE 299
+RQ +L SAT+ E+V+ L K+SL PV + D + P S T EE
Sbjct: 316 --PKKRQTMLFSATMTEEVDDLIKLSLSKPVRLSADPSAKRPASLT------------EE 361
Query: 300 KYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAV 359
V I+R +V + VLL++ F + KV++F T A
Sbjct: 362 ---------------VVRIRRMREV---NHEAVLLAMCTKTF----TSKVIIFSGTKQAA 399
Query: 360 DFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLS 419
+ L F S G K LHGN+ Q R + + F+ + L++
Sbjct: 400 ---HRLRIIFGLS--------------GLKAAELHGNLTQAQRLDALEQFRKQQVDFLVA 442
Query: 420 TDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLE 479
TDV+ARGLD V+ +I + CP + T YVHRVGRTAR G G ++ F+ +R L+ +
Sbjct: 443 TDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSAVTFVTDSDRSLLKAIA 502
Query: 480 KHGVS 484
K S
Sbjct: 503 KRAGS 507
>Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:19680414-19670656 | 20130731
Length = 760
Score = 196 bits (498), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 138/422 (32%), Positives = 209/422 (49%), Gaps = 73/422 (17%)
Query: 63 LGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFA 122
LG+ PT +QA IP+ L+GR +A TG+GKT A+ P + L R+
Sbjct: 169 LGYSKPTPIQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLFRPKRVH---AIRV 225
Query: 123 LVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLL 182
L+L PTREL QV + ++K L +F I I+GG + +++ LR I++ATPGR++
Sbjct: 226 LILTPTRELAAQV-QSMIKSLSQFTDIRCCLIVGGLSTKEQEVALRSRPDIVVATPGRMI 284
Query: 183 DHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASK 242
DHL+ + S +L +I DEADR+LELGF +I+E++ + C
Sbjct: 285 DHLRNSMSVDLDDLSVLILDEADRLLELGFSAEIQELVRV-------C-----------P 326
Query: 243 TQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKYS 302
+RQ +L SAT+ E+V+ L K+SL P+ + D + P S T EE
Sbjct: 327 KKRQTMLFSATMTEEVDDLIKLSLSKPLRLSADPLAKRPASLT------------EE--- 371
Query: 303 GKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDFH 362
V ++R +V ++ VLL++ F + KV++F T A
Sbjct: 372 ------------VVRLRRMREV---NQEAVLLAMCSKTF----TSKVIIFSGTKQAA--- 409
Query: 363 YSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDV 422
+ L F S G K LHGN+ Q R + + F+ + L++TDV
Sbjct: 410 HRLRIIFGLS--------------GLKAAELHGNLTQAQRLGALEEFRKQQVDFLVATDV 455
Query: 423 SARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEKHG 482
+ARGLD V+ +I + CP + T YVHRVGRTAR G G ++ F+ +R L+ + K
Sbjct: 456 AARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSAVTFVTDNDRSLLKAIAKRA 515
Query: 483 VS 484
S
Sbjct: 516 GS 517
>Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:32167186-32161537 | 20130731
Length = 589
Score = 196 bits (497), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 146/489 (29%), Positives = 233/489 (47%), Gaps = 81/489 (16%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
F+ T VQA IP++ S + V+AATG+GKT+A++ P++ L+ + + +
Sbjct: 34 NFDFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVIPLVEILRRNASN-PKPHQVLGV 92
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGG-ENRSKEKARLRKGISILIATPGRLL 182
++ PTREL Q+Y + + + ++GG E ++ K +G ++LI TPGRL
Sbjct: 93 IISPTRELASQIYHVAQPFISTLANVKSMLLVGGVEVKADIKKIEEEGANVLIGTPGRLH 152
Query: 183 DHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEIL-DLLGSTRTGCDDQENAVPGAS 241
D + + + + +I DEADR+L++GF K I I+ +L RTG
Sbjct: 153 DIMNRMDILDFKSFEILILDEADRLLDMGFQKQINAIITELPKLRRTG------------ 200
Query: 242 KTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKY 301
L SAT + V LAK L NPV + + AE ++
Sbjct: 201 -------LFSATQTQAVEELAKAGLRNPVRVEV---------------RAETKTANDSAS 238
Query: 302 SGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDF 361
S KI + K P L +++ + L+ L + S+K++++F TC VD+
Sbjct: 239 SKKIES---SKTPSGLQIEYLECEADKKPSQLVDFLV----KNRSKKIIIYFMTCACVDY 291
Query: 362 HYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTD 421
+L P++ + G ++ LHG M+Q R + +F + ++ +LL TD
Sbjct: 292 WGLVL--------PRL-----SVLKGFSLISLHGKMKQSVREKALTSFTSLSNGILLCTD 338
Query: 422 VSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEKH 481
V+ARGLD P V CI+QYD P + +VHRVGRTARLG++G +++FL P E Y++ L
Sbjct: 339 VAARGLDIPGVDCIVQYDPPQDPNVFVHRVGRTARLGKQGHAVVFLLPKEESYVEFLRIR 398
Query: 482 GVSLTEYPLLKVLDYFPLHGQSKHLKKSVFIDSHPWVLCLQKALESFITSKPKLDELAKR 541
V L E + D+ P V+ + S T + E R
Sbjct: 399 RVPLQE---------------------RMCSDNAPDVI---PEIRSAATKDRDVMEKGVR 434
Query: 542 AFCSWVRAY 550
AF S++RAY
Sbjct: 435 AFVSYIRAY 443
>Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10113462-10118856 | 20130731
Length = 569
Score = 192 bits (489), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 199/417 (47%), Gaps = 70/417 (16%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYL--QSYDNRIQRSDGTF 121
G+E T+VQ +PVIL G+ L A TGTGKT+A+L P I + +NR Q
Sbjct: 120 GYEKMTIVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPNNRGQNQTPIL 179
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKG-ISILIATPGR 180
LV+ PTREL Q KLL I ++GG + S E+ R++K ILIATPGR
Sbjct: 180 VLVVCPTRELACQAAAEATKLLKYHPTIGAQVVIGGTSLSSEQKRIQKNPCQILIATPGR 239
Query: 181 LLDHLKKTSSFV--YTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVP 238
L DH+ T+ F ++ ++ DEAD++L++GF KDIE+I+ +VP
Sbjct: 240 LKDHIANTAGFASKLMGVKALVLDEADQLLDMGFRKDIEKII--------------ASVP 285
Query: 239 GASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSE 298
QRQ L+ SAT+ + V+ + ++L+ K E I+T E +E
Sbjct: 286 ----KQRQTLMFSATIPDAVHQVCNVALK---------KDFEFINTV--------QEGTE 324
Query: 299 EKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDA 358
E +S Q+ Q H+ P +L ILK + KV+VF +T
Sbjct: 325 ETHS-------------QVRQMHLIAPLDKHFSLLSVILKEHIADDVDYKVLVFCTTAMV 371
Query: 359 VDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLL 418
+LL L + +H Q R F+ +L+
Sbjct: 372 TSLVANLLGK-----------------LNLNVREIHSRKNQSYRTRVSDEFRKSKRLILV 414
Query: 419 STDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYL 475
++DVSARG+D+P V ++Q P + +Y+HR+GRT R G++G+ +L L P E +L
Sbjct: 415 TSDVSARGVDYPDVSLVVQVGLPADKQQYIHRLGRTGRKGKEGKGILLLAPWEEFFL 471
>Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10111776-10105760 | 20130731
Length = 668
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/433 (30%), Positives = 204/433 (47%), Gaps = 70/433 (16%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYL--QSYDNRIQRSDGTF 121
G+E T+VQ +PVIL G+ L A TGTGKT+A+L P I + +R QR F
Sbjct: 219 GYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPSDRDQRRPPIF 278
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKG-ISILIATPGR 180
LV+ PTREL Q KLL I ++GG + E+ R++ IL+ATPGR
Sbjct: 279 VLVICPTRELACQAAAEATKLLKYHPTIGVQVVIGGTRLALEQKRMQANPCQILVATPGR 338
Query: 181 LLDHLKKTSSFV--YTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVP 238
L DH++ T+ F ++ ++ DEAD +L++GF KDIE+I+ A+P
Sbjct: 339 LRDHIENTAGFASRLMGVKSLVLDEADHLLDMGFRKDIEKII--------------AAIP 384
Query: 239 GASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSE 298
QRQ L+ SAT+ ++V + ++L+ + E I+T E SE
Sbjct: 385 ----KQRQTLMFSATIPDEVRQVCHVALK---------RDFEYINTV--------QEGSE 423
Query: 299 EKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDA 358
+ +S Q+ Q H+ P P+L +ILK + KV+VF +T
Sbjct: 424 DTHS-------------QVRQMHLVAPLDKHFPLLYAILKEHIADDVDYKVLVFCTTAMV 470
Query: 359 VDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLL 418
LL L + +H Q R F+ +L+
Sbjct: 471 TRLVADLLGE-----------------LNLNVREIHSRKPQSYRTRVSDEFRKSKGLILV 513
Query: 419 STDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDL 478
++DVSARG+D+P V ++Q P + +Y+HR+GRT R G++G+ +L L P E +L
Sbjct: 514 TSDVSARGVDYPDVTLVVQVGLPADKQQYIHRLGRTGRKGKEGQGILLLAPWEEFFLATA 573
Query: 479 EKHGVSLTEYPLL 491
+ + PL+
Sbjct: 574 KDLPIVKAPVPLV 586
>Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10127066 | 20130731
Length = 573
Score = 187 bits (475), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 196/417 (47%), Gaps = 70/417 (16%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYL--QSYDNRIQRSDGTF 121
G+E T+VQ +PVIL G+ L A TGTGKT+A+L P I + + Q
Sbjct: 124 GYEKMTIVQEATLPVILEGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPSDPGQSQTPIL 183
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKG-ISILIATPGR 180
LV+ PTREL Q KLL I ++GG E+ R++K IL+ATPGR
Sbjct: 184 VLVVCPTRELARQAAAEATKLLKYHPTIGAQVVIGGTKIVSEQKRIQKNPCQILVATPGR 243
Query: 181 LLDHLKKTSSFVYT--NLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVP 238
L DH+ KT+ F L+ + DEADR+L++GF KDIEEI+ +VP
Sbjct: 244 LKDHIAKTAGFASNLMGLKTFVIDEADRLLDMGFRKDIEEII--------------TSVP 289
Query: 239 GASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSE 298
QRQ L+ SAT+ + V+ + ++L+ K E I+T E +E
Sbjct: 290 ----KQRQTLMFSATIPKAVHQVCNVALK---------KDYEFINTV--------QEGTE 328
Query: 299 EKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDA 358
E +S Q+ Q H+ P +L ILK E KV+VF +T
Sbjct: 329 ETHS-------------QVRQMHLIAPLDKHFSLLSVILKEHIADEVDYKVLVFCTTAMV 375
Query: 359 VDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLL 418
SLL + + ++ +Q R F+ +L+
Sbjct: 376 TSLVASLLGKLDLN-----------------VREIYSRKKQGFRNRVSDEFRKSKRLILV 418
Query: 419 STDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYL 475
++DVSARG+D+P V ++Q P + Y+HR+GRT R+G++G+ +L L P E +L
Sbjct: 419 TSDVSARGVDYPDVSLVVQLGIPADKELYIHRLGRTGRIGKEGKGILLLAPWEEFFL 475
>Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:20527189-20518464 | 20130731
Length = 438
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 199/430 (46%), Gaps = 78/430 (18%)
Query: 61 DRLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGT 120
+++G++ P +Q +AIP L G+ + A TG+GKT A+ PI+H L R +
Sbjct: 25 EKVGWKTPLEIQIEAIPPALEGKDLIGLAKTGSGKTGAFALPILHALLE----APRPNHF 80
Query: 121 FALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGR 180
FA V+ PTREL +Q+ E L + ++GG + ++ ++ K I++ TPGR
Sbjct: 81 FACVMSPTRELAIQISEQFEALGSEI-GVKCAVLVGGIDMVQQSVKIAKLPHIIVGTPGR 139
Query: 181 LLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGA 240
+LDHLK T F L++++ DEADR+L F + + EIL G
Sbjct: 140 VLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEIL------------------GM 181
Query: 241 SKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEK 300
+R+ L SAT+ KV L ++ L NPV
Sbjct: 182 IPRERRTFLFSATMTNKVEKLQRVCLRNPV------------------------------ 211
Query: 301 YSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVD 360
KI T Y L Q++ +P + L+ IL + +VF TCD+
Sbjct: 212 ---KIETSSKYSTVDTLKQQYRFLPAKHKDCYLVYILSEM----AGSTSMVFTRTCDSTR 264
Query: 361 FHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLST 420
+L++ LG K + ++G+M Q R + FK+ + +LL T
Sbjct: 265 LLALILRN-----------------LGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCT 307
Query: 421 DVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEK 480
DV++RGLD P V +I YD P + +Y+HRVGRTAR G G ++ + E ++ +EK
Sbjct: 308 DVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYVQIEK 367
Query: 481 H-GVSLTEYP 489
G L EYP
Sbjct: 368 LIGKKLPEYP 377
>Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641167-30650711 | 20130731
Length = 438
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 200/430 (46%), Gaps = 78/430 (18%)
Query: 61 DRLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGT 120
+++G++ P +Q +AIP L G+ + A TG+GKT A+ PI+H L R +
Sbjct: 25 EKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAFALPILHALLE----APRPNHF 80
Query: 121 FALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGR 180
FA V+ PTREL +Q+ E L + ++GG + ++ ++ K I++ TPGR
Sbjct: 81 FACVMSPTRELAIQISEQFEALGSEI-GVKCAVLVGGIDMVQQSVKIAKLPHIIVGTPGR 139
Query: 181 LLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGA 240
+LDHLK T F L++++ DEADR+L F + + EIL G
Sbjct: 140 VLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEIL------------------GM 181
Query: 241 SKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEK 300
+R+ L SAT+ +KV L ++ L NPV
Sbjct: 182 IPRERRTFLFSATMTKKVEKLQRVCLRNPV------------------------------ 211
Query: 301 YSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVD 360
KI T Y L Q++ +P + L+ IL + +VF TCD+
Sbjct: 212 ---KIETSSKYSTVDTLKQQYRFLPAKHKDCYLVYILTEM----AGSTSMVFTRTCDSTR 264
Query: 361 FHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLST 420
+L++ LG K + ++G+M Q R + FK+ + +LL T
Sbjct: 265 LLALILRN-----------------LGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCT 307
Query: 421 DVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEK 480
DV++RGLD P V +I YD P + +Y+HRVGRTAR G G ++ + E ++ +EK
Sbjct: 308 DVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYVQIEK 367
Query: 481 H-GVSLTEYP 489
G L EYP
Sbjct: 368 LIGKKLPEYP 377
>Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641166-30650890 | 20130731
Length = 438
Score = 185 bits (470), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/430 (30%), Positives = 200/430 (46%), Gaps = 78/430 (18%)
Query: 61 DRLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGT 120
+++G++ P +Q +AIP L G+ + A TG+GKT A+ PI+H L R +
Sbjct: 25 EKMGWKNPLKIQIEAIPPALEGKDLIGLAETGSGKTGAFALPILHALLE----APRPNHF 80
Query: 121 FALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGR 180
FA V+ PTREL +Q+ E L + ++GG + ++ ++ K I++ TPGR
Sbjct: 81 FACVMSPTRELAIQISEQFEALGSEI-GVKCAVLVGGIDMVQQSVKIAKLPHIIVGTPGR 139
Query: 181 LLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGA 240
+LDHLK T F L++++ DEADR+L F + + EIL G
Sbjct: 140 VLDHLKNTKGFSLARLKYLVLDEADRLLNEDFEESLNEIL------------------GM 181
Query: 241 SKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEK 300
+R+ L SAT+ +KV L ++ L NPV
Sbjct: 182 IPRERRTFLFSATMTKKVEKLQRVCLRNPV------------------------------ 211
Query: 301 YSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVD 360
KI T Y L Q++ +P + L+ IL + +VF TCD+
Sbjct: 212 ---KIETSSKYSTVDTLKQQYRFLPAKHKDCYLVYILTEM----AGSTSMVFTRTCDSTR 264
Query: 361 FHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLST 420
+L++ LG K + ++G+M Q R + FK+ + +LL T
Sbjct: 265 LLALILRN-----------------LGLKAIPINGHMSQPKRLGALNKFKSGDCNILLCT 307
Query: 421 DVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEK 480
DV++RGLD P V +I YD P + +Y+HRVGRTAR G G ++ + E ++ +EK
Sbjct: 308 DVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYVQIEK 367
Query: 481 H-GVSLTEYP 489
G L EYP
Sbjct: 368 LIGKKLPEYP 377
>Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:43124508-43126947 | 20130731
Length = 589
Score = 181 bits (458), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 195/412 (47%), Gaps = 83/412 (20%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYD--NRIQRSDGTF 121
G PT +Q Q +PVILSGR + A TG+GKT+ ++ P+I + I +G F
Sbjct: 163 GIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMMAMQEEIMMPIVPGEGPF 222
Query: 122 ALVLVPTRELCLQVYEILVKLL-----HRFHWIVPGYIMGGENRSKEKARLRKGISILIA 176
L++ P+REL Q YE++ + L + + P +GG + + ++KG+ I++A
Sbjct: 223 GLIICPSRELARQTYEVIEEFLLPLKEAGYPELRPLLCIGGIDMRSQLEIVKKGVHIVVA 282
Query: 177 TPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENA 236
TPGRL D L K N R++ DEADR+++LGF DI E+ D
Sbjct: 283 TPGRLKDMLAK-KKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHF------------- 328
Query: 237 VPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDED 296
K QRQ LL SAT+ K+ + A+ +L P+++ + + A+LD
Sbjct: 329 -----KAQRQTLLFSATMPTKIQNFARSALVKPIIVNVGR------AGAANLD------- 370
Query: 297 SEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTC 356
+IQ V +++ LL L ++ P ++ +
Sbjct: 371 --------------------VIQEVEYVKQEAKIVYLLECL----QKTPPPVLIFCENKA 406
Query: 357 DAVDFH-YSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSA 415
D D H Y LLK G + + +HG +QE R + +FK
Sbjct: 407 DVDDIHEYLLLK-------------------GVEAVAIHGGKDQEEREYAISSFKAGKKD 447
Query: 416 LLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFL 467
+L++TDV+++GLDFP ++ +I YD P E YVHR+GRT R G+ G + F+
Sbjct: 448 VLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFI 499
>Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:56166694-56169176 | 20130731
Length = 706
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 210/425 (49%), Gaps = 65/425 (15%)
Query: 61 DRLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQ-----SYDNRIQ 115
++ G++ P+ +Q AIP+ L R + A TG+GKT A++ P++ Y+ S +N
Sbjct: 302 EKAGYKTPSPIQMAAIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEEN--- 358
Query: 116 RSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILI 175
++G +A+V+ PTREL Q+ + VK + I I+GG++ ++ ++R+G I+I
Sbjct: 359 EAEGPYAVVMAPTRELAQQIEDETVKFAQ-YMGIKVVSIVGGQSIEEQGFKIRQGCEIVI 417
Query: 176 ATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQEN 235
ATPGRL+D L++ + V +++ DEADR++++GF + +LD + S+ ++++
Sbjct: 418 ATPGRLIDCLERRYA-VLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDE 476
Query: 236 AVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDE 295
+ + R + SAT+ V LA+ L NPV++
Sbjct: 477 EL-DEKRIYRTTYMFSATMPPAVERLARKYLRNPVVV----------------------- 512
Query: 296 DSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFST 355
T+G LI +HV + S L+ L + + +VF +T
Sbjct: 513 -----------TIGTAGKATDLISQHVIMMKESEKNYK---LQRLLDELNDKTAIVFVNT 558
Query: 356 CDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSA 415
+ DF L K+ DK+ G ++ LHG Q+ R S + F+T+
Sbjct: 559 KKSADF---LAKNL-----------DKE---GYRVTTLHGGKSQDQREISLEGFRTKRYN 601
Query: 416 LLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYL 475
+L++TDV+ RG+D P V +I YD PG Y HR+GRT R G+ G + FL + D
Sbjct: 602 VLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDTDVF 661
Query: 476 QDLEK 480
+L++
Sbjct: 662 YELKQ 666
>Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:8797246-8799070 | 20130731
Length = 591
Score = 179 bits (453), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 197/412 (47%), Gaps = 83/412 (20%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNR--IQRSDGTF 121
G PT +Q Q +PVILSGR + A TG+GKT+ ++ P+I + R I +G F
Sbjct: 165 GIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMMAMQEEIRMPIVPGEGPF 224
Query: 122 ALVLVPTRELCLQVYEILVKLL-----HRFHWIVPGYIMGGENRSKEKARLRKGISILIA 176
L++ P+ EL Q YE++ + L + + P +GG + + ++KG+ I++A
Sbjct: 225 GLIICPSWELARQTYEVIEQFLLPLKEAGYPELRPLLCIGGIDMRSQLKIVKKGVHIVVA 284
Query: 177 TPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENA 236
TPGRL D L K N R++ DEADR+++ GF DI E+ D
Sbjct: 285 TPGRLKDMLAK-KKMNLDNCRYLTLDEADRLVDPGFEDDIREVFDHF------------- 330
Query: 237 VPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDED 296
K QRQ LL SAT+ K+ + A+ +L P+++ + + A+LD
Sbjct: 331 -----KAQRQTLLFSATMPTKIQNFARSALVKPIIVNVGR------AGAANLD------- 372
Query: 297 SEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTC 356
+IQ V +++ LL L ++ P ++ +
Sbjct: 373 --------------------VIQEVEYVKQEAKIVYLLECL----QKTPPPVLIFCENKA 408
Query: 357 DAVDFH-YSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSA 415
D + H Y LLK G + + +HG+ +QE+R + +FKT
Sbjct: 409 DVDNIHEYLLLK-------------------GVEAVAIHGDKDQEDREYAISSFKTGKKD 449
Query: 416 LLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFL 467
+L++TD++++GLDFP ++ +I YD P E YVHR+GRT R G+ G + F+
Sbjct: 450 VLVATDIASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFI 501
>Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 625
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 201/428 (46%), Gaps = 79/428 (18%)
Query: 56 CDQLRDRLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQ 115
C + +LGF PT +QAQ P+ L+GR + A TG+GKT++YL P I ++ S R+
Sbjct: 212 CLDVIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHV-SAQPRLV 270
Query: 116 RSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILI 175
+ +G LVL PTREL +Q+ + +K R + I I GG + + LR G+ I+I
Sbjct: 271 QGEGPVVLVLAPTRELAVQIQQEAMKFGSRSN-IRCTCIYGGAPKGPQIRDLRMGVEIVI 329
Query: 176 ATPGRLLDHLKKTSSFVYTNLR---WIIFDEADRILELGFGKDIEEILDLLGSTRTGCDD 232
ATPGRL+D L+ +TNL+ +++ DEADR+L++GF I +I++ +
Sbjct: 330 ATPGRLIDMLEAQ----HTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQI--------- 376
Query: 233 QENAVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAE 292
+ RQ L SAT ++V LA+ L NP + + ++ S++
Sbjct: 377 ---------RPDRQTLYWSATWPKEVESLARQFLHNPYKVVIGSPYLK---ANQSINQVV 424
Query: 293 PDEDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVF 352
EKY+ L+ +LK + + ++++F
Sbjct: 425 EVVTDMEKYN-----------------------------RLIKLLKEVMD---GSRILIF 452
Query: 353 FSTCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTE 412
T D + + + +P L +HG+ Q R FK+
Sbjct: 453 TETKKGCD---QVTRQLRMDGWPA--------------LSIHGDKNQAERDWVLAEFKSG 495
Query: 413 NSALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIER 472
S ++ +TDV+ARGLD ++C++ YD P +YVHR+GRT R G KG + F
Sbjct: 496 RSPIMTATDVAARGLDVKDIKCVVNYDFPSSLEDYVHRIGRTGRAGAKGTAYSFFTSANA 555
Query: 473 DYLQDLEK 480
Y +DL K
Sbjct: 556 KYARDLIK 563
>Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:40729630-40725252 | 20130731
Length = 756
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/432 (29%), Positives = 206/432 (47%), Gaps = 72/432 (16%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIH-YLQSYDNRI-QRSDGTF 121
G+ T VQ ++P+ L G +V A TGTGKT A+L P I L++ ++ R+ +
Sbjct: 306 GYTHMTRVQETSLPICLEGNDVMVKAKTGTGKTAAFLLPAIETVLKAMSSKTSHRAPPIY 365
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKG-ISILIATPGR 180
L+L PTREL Q+ LL + ++GG ++ RL +L+ATPGR
Sbjct: 366 VLILCPTRELASQIAAEAKVLLKYHDGVGVQTLVGGVRFKVDQKRLESDPCQMLVATPGR 425
Query: 181 LLDHLKKTS--SFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVP 238
LLDH++ + S L+ +I DEAD +L+LGF KDIE+I+D L
Sbjct: 426 LLDHIENKTGISVRVMGLQMLILDEADHLLDLGFRKDIEKIVDCL--------------- 470
Query: 239 GASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSE 298
QRQ+LL SAT+ ++V ++++ L+ E
Sbjct: 471 ---PRQRQSLLFSATIPKEVRRVSQLVLKR-----------------------------E 498
Query: 299 EKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDA 358
KY + +G + PVQ+ Q ++ P S ++ ILK + P KV+VF T
Sbjct: 499 HKYVDTV-GMGCVETPVQVKQSYLIAPHESHFQIVHHILKEHISQTPDYKVIVFCITGMV 557
Query: 359 VDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLL 418
Y LL+ K + + +H Q R FK +L+
Sbjct: 558 TSLTYHLLRDMKLN-----------------VREIHSRKPQLYRTRVSDEFKESKQMILV 600
Query: 419 STDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDL 478
S+DV++RG+++P V +IQ P + +Y+HR+GRT R G++G+ +L + P E +L ++
Sbjct: 601 SSDVTSRGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKEGKGILLIAPWEEYFLNEI 660
Query: 479 EKHGVSLTEYPL 490
+ + L ++PL
Sbjct: 661 K--DLPLEKFPL 670
>Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 212/427 (49%), Gaps = 71/427 (16%)
Query: 61 DRLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQ-----SYDNRIQ 115
++ G++ P+ +Q +IP+ L R + A TG+GKT A++ P++ Y+ S +N
Sbjct: 264 EKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEEN--- 320
Query: 116 RSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILI 175
++G +A+V+ PTREL Q+ + VK + I I+GG++ ++ ++R+G I+I
Sbjct: 321 EAEGPYAVVMAPTRELAQQIEDETVKFAQ-YMGIKVVSIVGGQSIEEQGFKIRQGCEIVI 379
Query: 176 ATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQEN 235
ATPGRL+D L++ + V +++ DEADR++++GF + +LD + S+ ++++
Sbjct: 380 ATPGRLIDCLERRYA-VLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDE 438
Query: 236 AVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVM--IGLDDKSIEPISTTASLDHAEP 293
+ + R + SAT+ V LA+ L NPV+ IG K+ + IS H
Sbjct: 439 EL-DEKRIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKATDLIS-----QHVIM 492
Query: 294 DEDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFF 353
++SE+ Y+ L L ++ + +VF
Sbjct: 493 MKESEKNYN----------------------------------LHRLLDQLNDKTAIVFV 518
Query: 354 STCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTEN 413
+T + DF L K+ + G ++ LHG Q+ R S + F+T+
Sbjct: 519 NTKKSADF---LAKNLE----------------GYRVTTLHGGKSQDQREISLEGFRTKR 559
Query: 414 SALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERD 473
+L++TDV+ RG+D P V +I YD PG Y HR+GRT R G+ G + FL + D
Sbjct: 560 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDTD 619
Query: 474 YLQDLEK 480
+L++
Sbjct: 620 VFYELKQ 626
>Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 212/427 (49%), Gaps = 71/427 (16%)
Query: 61 DRLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQ-----SYDNRIQ 115
++ G++ P+ +Q +IP+ L R + A TG+GKT A++ P++ Y+ S +N
Sbjct: 264 EKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEEN--- 320
Query: 116 RSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILI 175
++G +A+V+ PTREL Q+ + VK + I I+GG++ ++ ++R+G I+I
Sbjct: 321 EAEGPYAVVMAPTRELAQQIEDETVKFAQ-YMGIKVVSIVGGQSIEEQGFKIRQGCEIVI 379
Query: 176 ATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQEN 235
ATPGRL+D L++ + V +++ DEADR++++GF + +LD + S+ ++++
Sbjct: 380 ATPGRLIDCLERRYA-VLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDE 438
Query: 236 AVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVM--IGLDDKSIEPISTTASLDHAEP 293
+ + R + SAT+ V LA+ L NPV+ IG K+ + IS H
Sbjct: 439 EL-DEKRIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKATDLIS-----QHVIM 492
Query: 294 DEDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFF 353
++SE+ Y+ L L ++ + +VF
Sbjct: 493 MKESEKNYN----------------------------------LHRLLDQLNDKTAIVFV 518
Query: 354 STCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTEN 413
+T + DF L K+ + G ++ LHG Q+ R S + F+T+
Sbjct: 519 NTKKSADF---LAKNLE----------------GYRVTTLHGGKSQDQREISLEGFRTKR 559
Query: 414 SALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERD 473
+L++TDV+ RG+D P V +I YD PG Y HR+GRT R G+ G + FL + D
Sbjct: 560 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDTD 619
Query: 474 YLQDLEK 480
+L++
Sbjct: 620 VFYELKQ 626
>Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708891-704351 | 20130731
Length = 666
Score = 177 bits (449), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 212/427 (49%), Gaps = 71/427 (16%)
Query: 61 DRLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQ-----SYDNRIQ 115
++ G++ P+ +Q +IP+ L R + A TG+GKT A++ P++ Y+ S +N
Sbjct: 264 EKAGYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEEN--- 320
Query: 116 RSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILI 175
++G +A+V+ PTREL Q+ + VK + I I+GG++ ++ ++R+G I+I
Sbjct: 321 EAEGPYAVVMAPTRELAQQIEDETVKFAQ-YMGIKVVSIVGGQSIEEQGFKIRQGCEIVI 379
Query: 176 ATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQEN 235
ATPGRL+D L++ + V +++ DEADR++++GF + +LD + S+ ++++
Sbjct: 380 ATPGRLIDCLERRYA-VLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDE 438
Query: 236 AVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVM--IGLDDKSIEPISTTASLDHAEP 293
+ + R + SAT+ V LA+ L NPV+ IG K+ + IS H
Sbjct: 439 EL-DEKRIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKATDLIS-----QHVIM 492
Query: 294 DEDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFF 353
++SE+ Y+ L L ++ + +VF
Sbjct: 493 MKESEKNYN----------------------------------LHRLLDQLNDKTAIVFV 518
Query: 354 STCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTEN 413
+T + DF L K+ + G ++ LHG Q+ R S + F+T+
Sbjct: 519 NTKKSADF---LAKNLE----------------GYRVTTLHGGKSQDQREISLEGFRTKR 559
Query: 414 SALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERD 473
+L++TDV+ RG+D P V +I YD PG Y HR+GRT R G+ G + FL + D
Sbjct: 560 YNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDTD 619
Query: 474 YLQDLEK 480
+L++
Sbjct: 620 VFYELKQ 626
>Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857806-27867020 | 20130731
Length = 530
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 194/403 (48%), Gaps = 67/403 (16%)
Query: 65 FEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFALV 124
+ PT +QAQA+P+ LSGR L A TG+GKT A+ P+I + + I+R DG ALV
Sbjct: 105 YTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPP-IRRGDGPLALV 163
Query: 125 LVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLDH 184
L PTREL Q+ + + ++GG N K+++ LR G+ I +ATPGR +DH
Sbjct: 164 LAPTRELAQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIAVATPGRFIDH 223
Query: 185 LKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKTQ 244
L++ ++ + + + +++ DEADR+L++GF I EI+ L +
Sbjct: 224 LQQGNTSL-SRISYVVLDEADRMLDMGFEPQIREIMRSL------------------PEK 264
Query: 245 RQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKYSGK 304
Q LL SAT+ ++ L+K L +PV + + S + + +L +E K
Sbjct: 265 HQTLLFSATMPVEIEALSKEYLASPVQVKVGKVSSPTTNVSQTLVKVSENE--------K 316
Query: 305 IPTVGDYKVPVQLIQRHVKVP-CGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDFHY 363
I + D L++ + CG P L+I+ ER+ + CD V
Sbjct: 317 IDRLLDL-----LVEEASQAEKCGHPFP--LTIV--FVERK---------TRCDEV---- 354
Query: 364 SLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDVS 423
+ + G + LHG Q R + F++ ++++L++TDV+
Sbjct: 355 ----------------AEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDVA 398
Query: 424 ARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLF 466
+RGLD V +I D P +Y+HR+GRT R G G + F
Sbjct: 399 SRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSF 441
>Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857732-27867387 | 20130731
Length = 561
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/403 (29%), Positives = 194/403 (48%), Gaps = 67/403 (16%)
Query: 65 FEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFALV 124
+ PT +QAQA+P+ LSGR L A TG+GKT A+ P+I + + I+R DG ALV
Sbjct: 136 YTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPP-IRRGDGPLALV 194
Query: 125 LVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLDH 184
L PTREL Q+ + + ++GG N K+++ LR G+ I +ATPGR +DH
Sbjct: 195 LAPTRELAQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIAVATPGRFIDH 254
Query: 185 LKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKTQ 244
L++ ++ + + + +++ DEADR+L++GF I EI+ L +
Sbjct: 255 LQQGNTSL-SRISYVVLDEADRMLDMGFEPQIREIMRSL------------------PEK 295
Query: 245 RQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKYSGK 304
Q LL SAT+ ++ L+K L +PV + + S + + +L +E K
Sbjct: 296 HQTLLFSATMPVEIEALSKEYLASPVQVKVGKVSSPTTNVSQTLVKVSENE--------K 347
Query: 305 IPTVGDYKVPVQLIQRHVKVP-CGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDFHY 363
I + D L++ + CG P L+I+ ER+ + CD V
Sbjct: 348 IDRLLDL-----LVEEASQAEKCGHPFP--LTIV--FVERK---------TRCDEV---- 385
Query: 364 SLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDVS 423
+ + G + LHG Q R + F++ ++++L++TDV+
Sbjct: 386 ----------------AEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDVA 429
Query: 424 ARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLF 466
+RGLD V +I D P +Y+HR+GRT R G G + F
Sbjct: 430 SRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSF 472
>Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:43035445-43041856 | 20130731
Length = 499
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 197/423 (46%), Gaps = 85/423 (20%)
Query: 62 RLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTF 121
+ GF PT +Q+Q P+ L GR + A TG+GKT+AYL P I ++ + + DG
Sbjct: 112 KAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNA-QPILDPGDGPI 170
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRL 181
LVL PTREL +Q+ + K I I GG + + L+KG+ I+IATPGRL
Sbjct: 171 VLVLAPTRELAVQIQQEATKFGASSR-IKSTCIYGGVPKGPQVRDLQKGVEIIIATPGRL 229
Query: 182 LDHLKKTSSFVYTNLR---WIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVP 238
+D L+ +TNLR +++ DEADR+L++GF I +I+ +
Sbjct: 230 IDMLESN----HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQI--------------- 270
Query: 239 GASKTQRQNLLLSATLNEKVNHLAKISLENP--VMIGLDDKSIEPISTTASLDHAEPDED 296
+ RQ L SAT ++V LA+ L NP V+IG +D +HA
Sbjct: 271 ---RPDRQTLYWSATWPKEVEQLARQFLYNPYKVIIGSED---------LKANHA----- 313
Query: 297 SEEKYSGKIPTVGDYKVPVQLIQRHVK-VPCGSRLPVLLSILKHLFEREPSQKVVVFFST 355
I+++V VP + L+ +L+ + + ++++F T
Sbjct: 314 ---------------------IKQYVDIVPEKQKYDKLVKLLEDIMD---GSRILIFMDT 349
Query: 356 CDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSA 415
D + + + +P L +HG+ Q R FK+ S
Sbjct: 350 KKGCD---QITRQLRMDGWPA--------------LSIHGDKSQAERDWVLSEFKSGKSP 392
Query: 416 LLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYL 475
++ +TDV+ARGLD V+ +I YD PG +YVHR+GRT R G KG + F +
Sbjct: 393 IMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFA 452
Query: 476 QDL 478
++L
Sbjct: 453 KEL 455
>Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 203/424 (47%), Gaps = 81/424 (19%)
Query: 62 RLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTF 121
+ FE P +QAQA+PVI+SGR + A TG+GKT+A++ P++ +++ + DG
Sbjct: 520 KANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPP-VVVGDGPI 578
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFH-WIVPGYIMGGENRSKEKARLRKGISILIATPGR 180
L++ PTREL Q++ + K VP Y GG +++ + L++G I++ TPGR
Sbjct: 579 GLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY--GGSGVAQQISELKRGTEIVVCTPGR 636
Query: 181 LLDHLKKTSSFVYTNLR---WIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAV 237
++D L TSS TNLR +++ DEADR+ ++GF I I+ +N
Sbjct: 637 MIDIL-CTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIV-------------QNIR 682
Query: 238 PGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDS 297
P RQ +L SAT +V LA+ L PV I
Sbjct: 683 P-----DRQTVLFSATFPRQVEILARKVLNKPVEI------------------------- 712
Query: 298 EEKYSGKIPTVGDYKVPVQLIQRHVKV-PCGSRLPVLLSILKHLFEREPSQKVVVFFSTC 356
VG V + I + V+V P R LL +L +E+ K++VF +
Sbjct: 713 ---------QVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYEK---GKILVFVHSQ 760
Query: 357 DAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSAL 416
D D +L K YP C L LHG +Q +R ++ FK+ L
Sbjct: 761 DKCD---ALFKDLMKHGYP------------C--LSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 417 LLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQ 476
L++T ++ARGLD ++ +I +D P +YVHRVGRT R G KG ++ F+ + Y
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAP 863
Query: 477 DLEK 480
DL K
Sbjct: 864 DLVK 867
>Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 203/424 (47%), Gaps = 81/424 (19%)
Query: 62 RLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTF 121
+ FE P +QAQA+PVI+SGR + A TG+GKT+A++ P++ +++ + DG
Sbjct: 520 KANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPP-VVVGDGPI 578
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFH-WIVPGYIMGGENRSKEKARLRKGISILIATPGR 180
L++ PTREL Q++ + K VP Y GG +++ + L++G I++ TPGR
Sbjct: 579 GLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY--GGSGVAQQISELKRGTEIVVCTPGR 636
Query: 181 LLDHLKKTSSFVYTNLR---WIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAV 237
++D L TSS TNLR +++ DEADR+ ++GF I I+ +N
Sbjct: 637 MIDIL-CTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIV-------------QNIR 682
Query: 238 PGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDS 297
P RQ +L SAT +V LA+ L PV I
Sbjct: 683 P-----DRQTVLFSATFPRQVEILARKVLNKPVEI------------------------- 712
Query: 298 EEKYSGKIPTVGDYKVPVQLIQRHVKV-PCGSRLPVLLSILKHLFEREPSQKVVVFFSTC 356
VG V + I + V+V P R LL +L +E+ K++VF +
Sbjct: 713 ---------QVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYEK---GKILVFVHSQ 760
Query: 357 DAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSAL 416
D D +L K YP C L LHG +Q +R ++ FK+ L
Sbjct: 761 DKCD---ALFKDLMKHGYP------------C--LSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 417 LLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQ 476
L++T ++ARGLD ++ +I +D P +YVHRVGRT R G KG ++ F+ + Y
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAP 863
Query: 477 DLEK 480
DL K
Sbjct: 864 DLVK 867
>Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784007 | 20130731
Length = 1114
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 203/424 (47%), Gaps = 81/424 (19%)
Query: 62 RLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTF 121
+ FE P +QAQA+PVI+SGR + A TG+GKT+A++ P++ +++ + DG
Sbjct: 520 KANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPP-VVVGDGPI 578
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFH-WIVPGYIMGGENRSKEKARLRKGISILIATPGR 180
L++ PTREL Q++ + K VP Y GG +++ + L++G I++ TPGR
Sbjct: 579 GLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY--GGSGVAQQISELKRGTEIVVCTPGR 636
Query: 181 LLDHLKKTSSFVYTNLR---WIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAV 237
++D L TSS TNLR +++ DEADR+ ++GF I I+ +N
Sbjct: 637 MIDIL-CTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIV-------------QNIR 682
Query: 238 PGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDS 297
P RQ +L SAT +V LA+ L PV I
Sbjct: 683 P-----DRQTVLFSATFPRQVEILARKVLNKPVEI------------------------- 712
Query: 298 EEKYSGKIPTVGDYKVPVQLIQRHVKV-PCGSRLPVLLSILKHLFEREPSQKVVVFFSTC 356
VG V + I + V+V P R LL +L +E+ K++VF +
Sbjct: 713 ---------QVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYEK---GKILVFVHSQ 760
Query: 357 DAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSAL 416
D D +L K YP C L LHG +Q +R ++ FK+ L
Sbjct: 761 DKCD---ALFKDLMKHGYP------------C--LSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 417 LLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQ 476
L++T ++ARGLD ++ +I +D P +YVHRVGRT R G KG ++ F+ + Y
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAP 863
Query: 477 DLEK 480
DL K
Sbjct: 864 DLVK 867
>Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 203/424 (47%), Gaps = 81/424 (19%)
Query: 62 RLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTF 121
+ FE P +QAQA+PVI+SGR + A TG+GKT+A++ P++ +++ + DG
Sbjct: 520 KANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPP-VVVGDGPI 578
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFH-WIVPGYIMGGENRSKEKARLRKGISILIATPGR 180
L++ PTREL Q++ + K VP Y GG +++ + L++G I++ TPGR
Sbjct: 579 GLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY--GGSGVAQQISELKRGTEIVVCTPGR 636
Query: 181 LLDHLKKTSSFVYTNLR---WIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAV 237
++D L TSS TNLR +++ DEADR+ ++GF I I+ +N
Sbjct: 637 MIDIL-CTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIV-------------QNIR 682
Query: 238 PGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDS 297
P RQ +L SAT +V LA+ L PV I
Sbjct: 683 P-----DRQTVLFSATFPRQVEILARKVLNKPVEI------------------------- 712
Query: 298 EEKYSGKIPTVGDYKVPVQLIQRHVKV-PCGSRLPVLLSILKHLFEREPSQKVVVFFSTC 356
VG V + I + V+V P R LL +L +E+ K++VF +
Sbjct: 713 ---------QVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYEK---GKILVFVHSQ 760
Query: 357 DAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSAL 416
D D +L K YP C L LHG +Q +R ++ FK+ L
Sbjct: 761 DKCD---ALFKDLMKHGYP------------C--LSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 417 LLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQ 476
L++T ++ARGLD ++ +I +D P +YVHRVGRT R G KG ++ F+ + Y
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAP 863
Query: 477 DLEK 480
DL K
Sbjct: 864 DLVK 867
>Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC |
chr2:778249-784007 | 20130731
Length = 1114
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 203/424 (47%), Gaps = 81/424 (19%)
Query: 62 RLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTF 121
+ FE P +QAQA+PVI+SGR + A TG+GKT+A++ P++ +++ + DG
Sbjct: 520 KANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPP-VVVGDGPI 578
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFH-WIVPGYIMGGENRSKEKARLRKGISILIATPGR 180
L++ PTREL Q++ + K VP Y GG +++ + L++G I++ TPGR
Sbjct: 579 GLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY--GGSGVAQQISELKRGTEIVVCTPGR 636
Query: 181 LLDHLKKTSSFVYTNLR---WIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAV 237
++D L TSS TNLR +++ DEADR+ ++GF I I+ +N
Sbjct: 637 MIDIL-CTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIV-------------QNIR 682
Query: 238 PGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDS 297
P RQ +L SAT +V LA+ L PV I
Sbjct: 683 P-----DRQTVLFSATFPRQVEILARKVLNKPVEI------------------------- 712
Query: 298 EEKYSGKIPTVGDYKVPVQLIQRHVKV-PCGSRLPVLLSILKHLFEREPSQKVVVFFSTC 356
VG V + I + V+V P R LL +L +E+ K++VF +
Sbjct: 713 ---------QVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYEK---GKILVFVHSQ 760
Query: 357 DAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSAL 416
D D +L K YP C L LHG +Q +R ++ FK+ L
Sbjct: 761 DKCD---ALFKDLMKHGYP------------C--LSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 417 LLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQ 476
L++T ++ARGLD ++ +I +D P +YVHRVGRT R G KG ++ F+ + Y
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAP 863
Query: 477 DLEK 480
DL K
Sbjct: 864 DLVK 867
>Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784023 | 20130731
Length = 1114
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 203/424 (47%), Gaps = 81/424 (19%)
Query: 62 RLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTF 121
+ FE P +QAQA+PVI+SGR + A TG+GKT+A++ P++ +++ + DG
Sbjct: 520 KANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPP-VVVGDGPI 578
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFH-WIVPGYIMGGENRSKEKARLRKGISILIATPGR 180
L++ PTREL Q++ + K VP Y GG +++ + L++G I++ TPGR
Sbjct: 579 GLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY--GGSGVAQQISELKRGTEIVVCTPGR 636
Query: 181 LLDHLKKTSSFVYTNLR---WIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAV 237
++D L TSS TNLR +++ DEADR+ ++GF I I+ +N
Sbjct: 637 MIDIL-CTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIV-------------QNIR 682
Query: 238 PGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDS 297
P RQ +L SAT +V LA+ L PV I
Sbjct: 683 P-----DRQTVLFSATFPRQVEILARKVLNKPVEI------------------------- 712
Query: 298 EEKYSGKIPTVGDYKVPVQLIQRHVKV-PCGSRLPVLLSILKHLFEREPSQKVVVFFSTC 356
VG V + I + V+V P R LL +L +E+ K++VF +
Sbjct: 713 ---------QVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYEK---GKILVFVHSQ 760
Query: 357 DAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSAL 416
D D +L K YP C L LHG +Q +R ++ FK+ L
Sbjct: 761 DKCD---ALFKDLMKHGYP------------C--LSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 417 LLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQ 476
L++T ++ARGLD ++ +I +D P +YVHRVGRT R G KG ++ F+ + Y
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAP 863
Query: 477 DLEK 480
DL K
Sbjct: 864 DLVK 867
>Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 203/424 (47%), Gaps = 81/424 (19%)
Query: 62 RLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTF 121
+ FE P +QAQA+PVI+SGR + A TG+GKT+A++ P++ +++ + DG
Sbjct: 520 KANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPP-VVVGDGPI 578
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFH-WIVPGYIMGGENRSKEKARLRKGISILIATPGR 180
L++ PTREL Q++ + K VP Y GG +++ + L++G I++ TPGR
Sbjct: 579 GLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY--GGSGVAQQISELKRGTEIVVCTPGR 636
Query: 181 LLDHLKKTSSFVYTNLR---WIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAV 237
++D L TSS TNLR +++ DEADR+ ++GF I I+ +N
Sbjct: 637 MIDIL-CTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIV-------------QNIR 682
Query: 238 PGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDS 297
P RQ +L SAT +V LA+ L PV I
Sbjct: 683 P-----DRQTVLFSATFPRQVEILARKVLNKPVEI------------------------- 712
Query: 298 EEKYSGKIPTVGDYKVPVQLIQRHVKV-PCGSRLPVLLSILKHLFEREPSQKVVVFFSTC 356
VG V + I + V+V P R LL +L +E+ K++VF +
Sbjct: 713 ---------QVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYEK---GKILVFVHSQ 760
Query: 357 DAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSAL 416
D D +L K YP C L LHG +Q +R ++ FK+ L
Sbjct: 761 DKCD---ALFKDLMKHGYP------------C--LSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 417 LLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQ 476
L++T ++ARGLD ++ +I +D P +YVHRVGRT R G KG ++ F+ + Y
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAP 863
Query: 477 DLEK 480
DL K
Sbjct: 864 DLVK 867
>Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 203/424 (47%), Gaps = 81/424 (19%)
Query: 62 RLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTF 121
+ FE P +QAQA+PVI+SGR + A TG+GKT+A++ P++ +++ + DG
Sbjct: 520 KANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPP-VVVGDGPI 578
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFH-WIVPGYIMGGENRSKEKARLRKGISILIATPGR 180
L++ PTREL Q++ + K VP Y GG +++ + L++G I++ TPGR
Sbjct: 579 GLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY--GGSGVAQQISELKRGTEIVVCTPGR 636
Query: 181 LLDHLKKTSSFVYTNLR---WIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAV 237
++D L TSS TNLR +++ DEADR+ ++GF I I+ +N
Sbjct: 637 MIDIL-CTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIV-------------QNIR 682
Query: 238 PGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDS 297
P RQ +L SAT +V LA+ L PV I
Sbjct: 683 P-----DRQTVLFSATFPRQVEILARKVLNKPVEI------------------------- 712
Query: 298 EEKYSGKIPTVGDYKVPVQLIQRHVKV-PCGSRLPVLLSILKHLFEREPSQKVVVFFSTC 356
VG V + I + V+V P R LL +L +E+ K++VF +
Sbjct: 713 ---------QVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYEK---GKILVFVHSQ 760
Query: 357 DAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSAL 416
D D +L K YP C L LHG +Q +R ++ FK+ L
Sbjct: 761 DKCD---ALFKDLMKHGYP------------C--LSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 417 LLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQ 476
L++T ++ARGLD ++ +I +D P +YVHRVGRT R G KG ++ F+ + Y
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAP 863
Query: 477 DLEK 480
DL K
Sbjct: 864 DLVK 867
>Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 203/424 (47%), Gaps = 81/424 (19%)
Query: 62 RLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTF 121
+ FE P +QAQA+PVI+SGR + A TG+GKT+A++ P++ +++ + DG
Sbjct: 520 KANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPP-VVVGDGPI 578
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFH-WIVPGYIMGGENRSKEKARLRKGISILIATPGR 180
L++ PTREL Q++ + K VP Y GG +++ + L++G I++ TPGR
Sbjct: 579 GLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY--GGSGVAQQISELKRGTEIVVCTPGR 636
Query: 181 LLDHLKKTSSFVYTNLR---WIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAV 237
++D L TSS TNLR +++ DEADR+ ++GF I I+ +N
Sbjct: 637 MIDIL-CTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIV-------------QNIR 682
Query: 238 PGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDS 297
P RQ +L SAT +V LA+ L PV I
Sbjct: 683 P-----DRQTVLFSATFPRQVEILARKVLNKPVEI------------------------- 712
Query: 298 EEKYSGKIPTVGDYKVPVQLIQRHVKV-PCGSRLPVLLSILKHLFEREPSQKVVVFFSTC 356
VG V + I + V+V P R LL +L +E+ K++VF +
Sbjct: 713 ---------QVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYEK---GKILVFVHSQ 760
Query: 357 DAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSAL 416
D D +L K YP C L LHG +Q +R ++ FK+ L
Sbjct: 761 DKCD---ALFKDLMKHGYP------------C--LSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 417 LLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQ 476
L++T ++ARGLD ++ +I +D P +YVHRVGRT R G KG ++ F+ + Y
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAP 863
Query: 477 DLEK 480
DL K
Sbjct: 864 DLVK 867
>Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC |
chr2:778234-784007 | 20130731
Length = 1114
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 203/424 (47%), Gaps = 81/424 (19%)
Query: 62 RLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTF 121
+ FE P +QAQA+PVI+SGR + A TG+GKT+A++ P++ +++ + DG
Sbjct: 520 KANFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPP-VVVGDGPI 578
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFH-WIVPGYIMGGENRSKEKARLRKGISILIATPGR 180
L++ PTREL Q++ + K VP Y GG +++ + L++G I++ TPGR
Sbjct: 579 GLIMAPTRELVQQIHSDIRKFTKVMGIRCVPVY--GGSGVAQQISELKRGTEIVVCTPGR 636
Query: 181 LLDHLKKTSSFVYTNLR---WIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAV 237
++D L TSS TNLR +++ DEADR+ ++GF I I+ +N
Sbjct: 637 MIDIL-CTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIV-------------QNIR 682
Query: 238 PGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDS 297
P RQ +L SAT +V LA+ L PV I
Sbjct: 683 P-----DRQTVLFSATFPRQVEILARKVLNKPVEI------------------------- 712
Query: 298 EEKYSGKIPTVGDYKVPVQLIQRHVKV-PCGSRLPVLLSILKHLFEREPSQKVVVFFSTC 356
VG V + I + V+V P R LL +L +E+ K++VF +
Sbjct: 713 ---------QVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYEK---GKILVFVHSQ 760
Query: 357 DAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSAL 416
D D +L K YP C L LHG +Q +R ++ FK+ L
Sbjct: 761 DKCD---ALFKDLMKHGYP------------C--LSLHGAKDQTDRESTISDFKSNVCNL 803
Query: 417 LLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQ 476
L++T ++ARGLD ++ +I +D P +YVHRVGRT R G KG ++ F+ + Y
Sbjct: 804 LVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEEDARYAP 863
Query: 477 DLEK 480
DL K
Sbjct: 864 DLVK 867
>Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:44909506-44914537 | 20130731
Length = 775
Score = 169 bits (429), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 194/401 (48%), Gaps = 77/401 (19%)
Query: 62 RLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTF 121
+ G+E PT +Q QA+PV+LSGR + A TG+GKT A++ P+I ++ +Q+ +G
Sbjct: 248 KQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQ-PELQKEEGPI 306
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRL 181
++ PTREL Q+Y + K + + I + GG ++ ++ L+ G I++ATPGRL
Sbjct: 307 GVICAPTRELAHQIY-LEAKKFAKAYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRL 365
Query: 182 LDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGAS 241
+D L K + +++ DEADR+ +LGF + I+ G
Sbjct: 366 IDML-KMKALAMLRATYLVLDEADRMFDLGFEPQVRSIV------------------GQI 406
Query: 242 KTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKY 301
+ RQ LL SAT+ KV LA+ L +P+ +
Sbjct: 407 RPDRQTLLFSATMPRKVEKLAREILSDPIRV----------------------------- 437
Query: 302 SGKIPTVGDYKVPVQLIQRHVKV-PCGS-RLPVLLSILKHLFEREPSQKVVVFFSTCDAV 359
TVG+ + + I + V+V P S +LP LL L + ++ +VF S V
Sbjct: 438 -----TVGEVGMANEDITQVVQVIPSDSEKLPWLLEKLHEMIDQ---GDTLVFASKKATV 489
Query: 360 DFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLS 419
D +++ G + G K+ LHG+ +Q +R Q FK+ +L++
Sbjct: 490 D-------------EIEVQLGQR----GFKVAALHGDKDQSSRMDILQKFKSGAYHVLIA 532
Query: 420 TDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEK 460
TDV+ARGLD ++ ++ +D + +VHR+GRT R G+K
Sbjct: 533 TDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDK 573
>Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:30630772-30640503 | 20130731
Length = 787
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 197/418 (47%), Gaps = 77/418 (18%)
Query: 62 RLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTF 121
R G++ PT +Q + +P+ILSG + A TG+GKT A+L P++H L N+ G
Sbjct: 35 RKGYKVPTPIQRKTMPLILSGIDVVAMARTGSGKTAAFLVPMLHRL----NQHVPQGGVR 90
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRL 181
L+L PTR+L Q + +L H F + ++GG++ + L + I+IATPGRL
Sbjct: 91 GLILSPTRDLAQQTLKFTKELGH-FTDLRVSLLVGGDSMESQFEELAQNPDIIIATPGRL 149
Query: 182 LDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGAS 241
+ HL + + +++FDEAD + +GF + + +IL LG EN
Sbjct: 150 MHHLSEVDDMSLRKVEYVVFDEADCLFGMGFAEQLHQILAQLG---------EN------ 194
Query: 242 KTQRQNLLLSATLNEKVNHLAKISLENPVMIGLD-DKSIEPISTTASLDHAEPDEDSEEK 300
RQ LL SATL + AK L +P ++ LD + I P + EEK
Sbjct: 195 ---RQTLLFSATLPSALAEFAKAGLRDPRLVRLDLETKISPDLKLVFFTLRQ-----EEK 246
Query: 301 YSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVD 360
Y+ LL +++ L + ++ ++F ST V+
Sbjct: 247 YA-----------------------------ALLYLIRELIGSD--EQTLIFVSTKHHVE 275
Query: 361 FHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLST 420
F SL Q+E G + +G+M+Q+ R+ F++ + LL+ T
Sbjct: 276 FLNSLF---------QLE--------GIRPSVCYGDMDQDARKEHVARFRSRKTMLLIVT 318
Query: 421 DVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDL 478
D++ARG+D P + +I +D P + +VHRVGR AR G G + FL + YL DL
Sbjct: 319 DIAARGIDIPLLDNVINWDFPPKPKIFVHRVGRVARAGRTGTAYSFLTAEDMAYLLDL 376
>Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768711-37774877 | 20130731
Length = 613
Score = 159 bits (402), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 195/415 (46%), Gaps = 74/415 (17%)
Query: 62 RLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQS-----YDNRIQR 116
R + PT VQ AIP+ L GR + A TG+GKT A+ PII + + R R
Sbjct: 161 RCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVR 220
Query: 117 SDGTFALVLVPTRELCLQVYEILVKLLHRFH-WIVPGYIMGGENRSKEKARLRKGISILI 175
+ ALVL PTREL +Q++E K ++ +V Y GG +++ L +G+ IL+
Sbjct: 221 TVCPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAY--GGAPINQQLRELERGVDILV 278
Query: 176 ATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQEN 235
ATPGRL+D L++ + + +R++ DEADR+L++GF I +I++ + G
Sbjct: 279 ATPGRLVDLLER-ARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGV----- 332
Query: 236 AVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDE 295
RQ +L SAT +++ LA L N + + + S+T +D
Sbjct: 333 ---------RQTMLFSATFPKEIQRLASDFLSNYIFLAVGRVG----SSTDLIDQR---- 375
Query: 296 DSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFST 355
V+ +Q K S L LL + + +VF T
Sbjct: 376 -------------------VEYVQESDKR---SHLMDLLHAQRANGVQGKQALTLVFVET 413
Query: 356 CDAVDF--HYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTEN 413
D H+ L +F ++ +HG+ Q+ R + ++FK+ N
Sbjct: 414 KKGADALEHWLCLNNFPATT-------------------IHGDRSQQEREAALRSFKSGN 454
Query: 414 SALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQ 468
+ +L++TDV+ARGLD P V ++ +D P + +YVHR+GRT R G+KG + F
Sbjct: 455 TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFN 509
>Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768655-37774862 | 20130731
Length = 613
Score = 159 bits (402), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 195/415 (46%), Gaps = 74/415 (17%)
Query: 62 RLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQS-----YDNRIQR 116
R + PT VQ AIP+ L GR + A TG+GKT A+ PII + + R R
Sbjct: 161 RCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMTGQPAQRPPRGVR 220
Query: 117 SDGTFALVLVPTRELCLQVYEILVKLLHRFH-WIVPGYIMGGENRSKEKARLRKGISILI 175
+ ALVL PTREL +Q++E K ++ +V Y GG +++ L +G+ IL+
Sbjct: 221 TVCPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAY--GGAPINQQLRELERGVDILV 278
Query: 176 ATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQEN 235
ATPGRL+D L++ + + +R++ DEADR+L++GF I +I++ + G
Sbjct: 279 ATPGRLVDLLER-ARVSLSMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPAGV----- 332
Query: 236 AVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDE 295
RQ +L SAT +++ LA L N + + + S+T +D
Sbjct: 333 ---------RQTMLFSATFPKEIQRLASDFLSNYIFLAVGRVG----SSTDLIDQR---- 375
Query: 296 DSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFST 355
V+ +Q K S L LL + + +VF T
Sbjct: 376 -------------------VEYVQESDKR---SHLMDLLHAQRANGVQGKQALTLVFVET 413
Query: 356 CDAVDF--HYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTEN 413
D H+ L +F ++ +HG+ Q+ R + ++FK+ N
Sbjct: 414 KKGADALEHWLCLNNFPATT-------------------IHGDRSQQEREAALRSFKSGN 454
Query: 414 SALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQ 468
+ +L++TDV+ARGLD P V ++ +D P + +YVHR+GRT R G+KG + F
Sbjct: 455 TPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFN 509
>Medtr8g027780.2 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10126329 | 20130731
Length = 458
Score = 153 bits (387), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 172/379 (45%), Gaps = 70/379 (18%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYL--QSYDNRIQRSDGTF 121
G+E T+VQ +PVIL G+ L A TGTGKT+A+L P I + + Q
Sbjct: 124 GYEKMTIVQEATLPVILEGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPSDPGQSQTPIL 183
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKG-ISILIATPGR 180
LV+ PTREL Q KLL I ++GG E+ R++K IL+ATPGR
Sbjct: 184 VLVVCPTRELARQAAAEATKLLKYHPTIGAQVVIGGTKIVSEQKRIQKNPCQILVATPGR 243
Query: 181 LLDHLKKTSSFVYT--NLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVP 238
L DH+ KT+ F L+ + DEADR+L++GF KDIEEI+ +VP
Sbjct: 244 LKDHIAKTAGFASNLMGLKTFVIDEADRLLDMGFRKDIEEII--------------TSVP 289
Query: 239 GASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSE 298
QRQ L+ SAT+ + V+ + ++L+ K E I+T E +E
Sbjct: 290 ----KQRQTLMFSATIPKAVHQVCNVALK---------KDYEFINTV--------QEGTE 328
Query: 299 EKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDA 358
E +S Q+ Q H+ P +L ILK E KV+VF +T
Sbjct: 329 ETHS-------------QVRQMHLIAPLDKHFSLLSVILKEHIADEVDYKVLVFCTTAMV 375
Query: 359 VDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLL 418
SLL L + ++ +Q R F+ +L+
Sbjct: 376 TSLVASLLGK-----------------LDLNVREIYSRKKQGFRNRVSDEFRKSKRLILV 418
Query: 419 STDVSARGLDFPKVRCIIQ 437
++DVSARG+D+P V ++Q
Sbjct: 419 TSDVSARGVDYPDVSLVVQ 437
>Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 192/416 (46%), Gaps = 86/416 (20%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYL-QSYDNRIQRSDGTFA 122
GF PT +QAQ P+ L GR + A TG+GKT+ YL P L Q +N + +G
Sbjct: 514 GFSNPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLMPAFILLRQRRNNSL---NGPTV 570
Query: 123 LVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLL 182
LVL PTREL Q+ E + K R + + GG ++ + L +G I++ATPGRL
Sbjct: 571 LVLAPTRELATQIQEEVFKFA-RSSRVSCTCLYGGAPKALQLKELDRGADIVVATPGRLN 629
Query: 183 DHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASK 242
D L + + + ++ DEADR+L++GF I +I+ N +P
Sbjct: 630 DIL-EMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIV--------------NEIP---- 670
Query: 243 TQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKYS 302
+RQ L+ +AT ++V +A L NPV + + + DE + K
Sbjct: 671 PRRQTLMYTATWPKEVRKIAGDLLVNPVQVNIGNV----------------DELAANKS- 713
Query: 303 GKIPTVGDYKVPVQLIQRHVK-VPCGSRLPVLLSILKHLFEREPSQKVVVFFST---CDA 358
I ++V+ VP + L IL+ +E K+++F ST CD
Sbjct: 714 ---------------ITQYVEVVPQMEKQRRLEQILR---SQERGSKIIIFCSTKKLCD- 754
Query: 359 VDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLL 418
S+ ++F ++ +HG+ Q R F+T S +L+
Sbjct: 755 -QLARSIGRTFGAAA-------------------IHGDKSQGERDWVLGQFRTGKSPILV 794
Query: 419 STDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDY 474
+TDV+ARGLD +R +I YD P +YVHR+GRT R G G + F E+D+
Sbjct: 795 ATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFFS--EQDW 848
>Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 192/416 (46%), Gaps = 86/416 (20%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYL-QSYDNRIQRSDGTFA 122
GF PT +QAQ P+ L GR + A TG+GKT+ YL P L Q +N + +G
Sbjct: 514 GFSNPTPIQAQTWPIALQGRDIVAIAKTGSGKTLGYLMPAFILLRQRRNNSL---NGPTV 570
Query: 123 LVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLL 182
LVL PTREL Q+ E + K R + + GG ++ + L +G I++ATPGRL
Sbjct: 571 LVLAPTRELATQIQEEVFKFA-RSSRVSCTCLYGGAPKALQLKELDRGADIVVATPGRLN 629
Query: 183 DHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASK 242
D L + + + ++ DEADR+L++GF I +I+ N +P
Sbjct: 630 DIL-EMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIV--------------NEIP---- 670
Query: 243 TQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKYS 302
+RQ L+ +AT ++V +A L NPV + + + DE + K
Sbjct: 671 PRRQTLMYTATWPKEVRKIAGDLLVNPVQVNIGNV----------------DELAANKS- 713
Query: 303 GKIPTVGDYKVPVQLIQRHVK-VPCGSRLPVLLSILKHLFEREPSQKVVVFFST---CDA 358
I ++V+ VP + L IL+ +E K+++F ST CD
Sbjct: 714 ---------------ITQYVEVVPQMEKQRRLEQILR---SQERGSKIIIFCSTKKLCD- 754
Query: 359 VDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLL 418
S+ ++F ++ +HG+ Q R F+T S +L+
Sbjct: 755 -QLARSIGRTFGAAA-------------------IHGDKSQGERDWVLGQFRTGKSPILV 794
Query: 419 STDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDY 474
+TDV+ARGLD +R +I YD P +YVHR+GRT R G G + F E+D+
Sbjct: 795 ATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFFS--EQDW 848
>Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 190/420 (45%), Gaps = 80/420 (19%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GF APT +QAQ+ P+ L + + A TG+GKT+ YL P +L+ +N + G L
Sbjct: 183 GFSAPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPAFIHLKRTNNNAKM--GPTVL 240
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLD 183
VL PTREL Q+ + VK + I + GG + + + +G I++ATPGRL D
Sbjct: 241 VLSPTRELATQIQDEAVK-FSKTSRIACTCLYGGAPKGPQLKDIDRGADIVVATPGRLND 299
Query: 184 HLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKT 243
L+ ++ + +++ DEADR+L++GF I +I+ N VP
Sbjct: 300 ILEMRRISLH-QVSYLVLDEADRMLDMGFEPQIRKIV--------------NGVP----A 340
Query: 244 QRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKYSG 303
+RQ L+ +AT ++V +A L NPV + + G
Sbjct: 341 RRQTLMFTATWPKEVRRIAADLLVNPVQVNI----------------------------G 372
Query: 304 KIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFST---CDAVD 360
+ + K Q I+ V RL +L ++ K+++F ST CD
Sbjct: 373 NVDELVANKSITQHIEVLTYVEKQRRLETILR------SQDQGSKIIIFCSTKKMCD--Q 424
Query: 361 FHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLST 420
+L + F ++ +HG+ Q +R F++ + +L++T
Sbjct: 425 LARNLTRQFGAAA-------------------IHGDKSQADRDHVLNQFRSGRTPVLVAT 465
Query: 421 DVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEK 480
DV+ARGLD +R ++ +D P +YVHR+GRT R G G + F + + DL K
Sbjct: 466 DVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTFFGDQDAKHASDLIK 525
>Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 117/420 (27%), Positives = 190/420 (45%), Gaps = 80/420 (19%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GF APT +QAQ+ P+ L + + A TG+GKT+ YL P +L+ +N + G L
Sbjct: 183 GFSAPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPAFIHLKRTNNNAKM--GPTVL 240
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLD 183
VL PTREL Q+ + VK + I + GG + + + +G I++ATPGRL D
Sbjct: 241 VLSPTRELATQIQDEAVK-FSKTSRIACTCLYGGAPKGPQLKDIDRGADIVVATPGRLND 299
Query: 184 HLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKT 243
L+ ++ + +++ DEADR+L++GF I +I+ N VP
Sbjct: 300 ILEMRRISLH-QVSYLVLDEADRMLDMGFEPQIRKIV--------------NGVP----A 340
Query: 244 QRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKYSG 303
+RQ L+ +AT ++V +A L NPV + + G
Sbjct: 341 RRQTLMFTATWPKEVRRIAADLLVNPVQVNI----------------------------G 372
Query: 304 KIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFST---CDAVD 360
+ + K Q I+ V RL +L ++ K+++F ST CD
Sbjct: 373 NVDELVANKSITQHIEVLTYVEKQRRLETILR------SQDQGSKIIIFCSTKKMCD--Q 424
Query: 361 FHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLST 420
+L + F ++ +HG+ Q +R F++ + +L++T
Sbjct: 425 LARNLTRQFGAAA-------------------IHGDKSQADRDHVLNQFRSGRTPVLVAT 465
Query: 421 DVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEK 480
DV+ARGLD +R ++ +D P +YVHR+GRT R G G + F + + DL K
Sbjct: 466 DVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTFFGDQDAKHASDLIK 525
>Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:23756195-23750953 | 20130731
Length = 608
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 197/417 (47%), Gaps = 79/417 (18%)
Query: 62 RLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPII------HYLQSYDNRIQ 115
R + PT VQ AIP+ L+GR + A TG+GKT A+ PII Y Q R+
Sbjct: 170 RCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGILTEQYAQR--PRVA 227
Query: 116 RSDGTFALVLVPTRELCLQVYEILVKLLHRFHW-IVPGYIMGGENRSKEKARLRKGISIL 174
R+ AL+L PTREL Q+++ K ++ +V Y GG +++ L +G+ IL
Sbjct: 228 RTAYPLALILSPTRELSCQIHDEAKKFSYQTGVKVVVAY--GGAPITQQLRELERGVDIL 285
Query: 175 IATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQE 234
+ATPGRL+D L++ + +R++ DEADR+L++GF I +I++ + +
Sbjct: 286 VATPGRLVDLLER-ARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQM----------D 334
Query: 235 NAVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPD 294
PG RQ LL SAT +++ LA L + + + +
Sbjct: 335 MPPPG----MRQTLLFSATFPKEIQRLASDFLASYIFLAV-------------------- 370
Query: 295 EDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQK---VVV 351
G++ + D + QR V + L+ +L E + + K +V
Sbjct: 371 --------GRVGSSTDL-----IAQRVEYVLESDKRSHLMDLLHAQRENDVNGKQGLTLV 417
Query: 352 FFSTCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKT 411
F T D +L + +P +H G+ Q+ R + ++FKT
Sbjct: 418 FVETKKGAD---ALEHCLCVNGFP------------ATCIH--GDRTQQEREQALRSFKT 460
Query: 412 ENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQ 468
N+ +L++TDV+ARGLD P+V ++ +D P + +YVHR+GRT R G+ G + F
Sbjct: 461 GNTPILVATDVAARGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFN 517
>Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:39247084-39252313 | 20130731
Length = 590
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 193/425 (45%), Gaps = 77/425 (18%)
Query: 71 VQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFALVLVPTRE 130
+Q + + GR + A TGTGKT+A+ PI+ + ++ + R ALVL PTRE
Sbjct: 106 IQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIMDKIIQFNAKHGRGKDPLALVLAPTRE 165
Query: 131 LCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLDHLKKTSS 190
L QV + + I + GG S++ +L G+ I + TPGR++D L + +
Sbjct: 166 LAKQVEKEFYEAAPNLDTIC---VYGGTPISQQMRQLDYGVDIAVGTPGRIIDLLNR-GA 221
Query: 191 FVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKTQRQNLLL 250
++++I DEAD++L++GF +D+E+IL+ L +RQ L+
Sbjct: 222 LNLKEVQFVILDEADQMLQVGFQEDVEKILERL------------------PAERQTLMF 263
Query: 251 SATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKYSGKIPTVGD 310
SAT+ + L + L+NP+ I L S + ++ SL YS
Sbjct: 264 SATMPTWIKQLTRNYLKNPLTIDLVGDSDQKLADGISL------------YSILSDAYVK 311
Query: 311 YKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTC-DAVDFHYSLLKSF 369
+ V LI+ H K K +VF T DA + + KS
Sbjct: 312 AGIIVPLIKEHAK----------------------GGKCIVFTQTKRDADRISHGMSKS- 348
Query: 370 KFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDF 429
+ C+ LHG++ Q R + F+ + +L++TDV++RGLD
Sbjct: 349 ----------------IPCE--ALHGDISQIQRERTLAGFRNGHFNVLVATDVASRGLDI 390
Query: 430 PKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEKH-GVSLTEY 488
P V +I Y+ P + +VHR GRT R G+KG ++L + L+ +E+ G +E
Sbjct: 391 PNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVYTQDQSRTLRTIERDVGCKFSEL 450
Query: 489 PLLKV 493
P + V
Sbjct: 451 PKIAV 455
>Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857813-27867050 | 20130731
Length = 456
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 180/378 (47%), Gaps = 67/378 (17%)
Query: 65 FEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFALV 124
+ PT +QAQA+P+ LSGR L A TG+GKT A+ P+I + + I+R DG ALV
Sbjct: 136 YTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPP-IRRGDGPLALV 194
Query: 125 LVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLDH 184
L PTREL Q+ + + ++GG N K+++ LR G+ I +ATPGR +DH
Sbjct: 195 LAPTRELAQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRAGVEIAVATPGRFIDH 254
Query: 185 LKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKTQ 244
L++ ++ + + + +++ DEADR+L++GF I EI+ L +
Sbjct: 255 LQQGNTSL-SRISYVVLDEADRMLDMGFEPQIREIMRSL------------------PEK 295
Query: 245 RQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKYSGK 304
Q LL SAT+ ++ L+K L +PV + + S + + +L +E K
Sbjct: 296 HQTLLFSATMPVEIEALSKEYLASPVQVKVGKVSSPTTNVSQTLVKVSENE--------K 347
Query: 305 IPTVGDYKVPVQLIQRHVKVP-CGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDFHY 363
I + D L++ + CG P L+I+ ER+ + CD V
Sbjct: 348 IDRLLDL-----LVEEASQAEKCGHPFP--LTIV--FVERK---------TRCDEV---- 385
Query: 364 SLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDVS 423
+ + G + LHG Q R + F++ ++++L++TDV+
Sbjct: 386 ----------------AEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDVA 429
Query: 424 ARGLDFPKVRCIIQYDCP 441
+RGLD V +I D P
Sbjct: 430 SRGLDVTGVSHVINLDLP 447
>Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:26668487-26670676 | 20130731
Length = 552
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 201/430 (46%), Gaps = 44/430 (10%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYL----------QSYDNR 113
GF PT VQ+ A+P IL R ++ + TG+GKT+AYL PI+ +
Sbjct: 127 GFNVPTDVQSAAVPTILKNRDVIIQSYTGSGKTLAYLLPILSVIGPLKGENNEGGGDGGE 186
Query: 114 IQRSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGI-S 172
+ G A+++ P+REL +Q+ K+L + V ++GG NR++++ L+K +
Sbjct: 187 SGKKLGVEAVIVAPSRELGMQIVREFEKILGMENRKVVQQLVGGANRTRQEEALKKNKPA 246
Query: 173 ILIATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDD 232
I++ TPGR+ + L + ++++ DE D +L F +D+ +L+ +G R+G D
Sbjct: 247 IVVGTPGRIAE-LSASGKLRAHGCQYLVLDEVDELLSFNFREDMHRLLEHVGR-RSGADH 304
Query: 233 QENAVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAE 292
A KT+RQ +++SAT+ V AK +P+++ K I P+ T +
Sbjct: 305 NSKA----KKTERQLIMVSATVPFSVVRAAKSWGSDPLLV--QAKKIVPLETLSP----- 353
Query: 293 PDEDSEEKYSGKIPTVGDYKVPVQLIQRHVK-VPCGSRLPVLLSILKHLFEREPSQKVVV 351
E + S K V+ + +K C RL + L+ ++ V+V
Sbjct: 354 --EPVKLSPSSSSTPSVPSKAVVESLPPALKHYYCVVRLQHKVDTLRRCIHALDAKFVIV 411
Query: 352 FFSTCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKT 411
F + H LK F K G K LHG++ + R T+ + FK
Sbjct: 412 FMN-------HTKQLKDVVF----------KLEARGVKAAELHGDLGKLGRSTTLKKFKN 454
Query: 412 ENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIE 471
+L++ ++SARGLD + ++ D P ++ Y HR GRT RLG G L + E
Sbjct: 455 GEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRNGTVLTICEESE 514
Query: 472 RDYLQDLEKH 481
++ L+K
Sbjct: 515 VFVVRKLKKQ 524
>Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:10401560-10398230 | 20130731
Length = 538
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 191/417 (45%), Gaps = 75/417 (17%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYD-NRIQRSDGTFA 122
G+E PT VQ QAIP L G++ LV A TG+GK+ ++L PII S+ + + A
Sbjct: 158 GYEMPTPVQMQAIPAALVGKNMLVLADTGSGKSASFLIPIISRCASHRLMYVSDNKKPLA 217
Query: 123 LVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLL 182
+VL PTREL +QV E KLL + ++GG+ +++ R+++G+ +++ TPGRL+
Sbjct: 218 MVLTPTRELSIQVEE-HAKLLGKGLPFKTALVVGGDAMARQLYRIQQGVELIVGTPGRLV 276
Query: 183 DHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASK 242
D L K + ++ + DE D +L+ GF + +I L
Sbjct: 277 DLLTK-NEIDLDDVTTFVVDEVDCMLQRGFRDQVLQIFTAL------------------- 316
Query: 243 TQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKYS 302
+Q Q L+ SAT ++ + +A ++ V+I
Sbjct: 317 SQPQVLMYSATTSDSLEKMANSMAKDTVVI------------------------------ 346
Query: 303 GKIPTVGDYKVPVQLI-QRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDF 361
TVG+ P + + Q + V + L ILK +P VV++ + D
Sbjct: 347 ----TVGEPNRPNKAVKQLAIWVESKQKKQKLFDILKSQKHFKPP--VVIYVGSRLGADL 400
Query: 362 HYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTD 421
L + S+ G K + +HG RR Q+F ++++T
Sbjct: 401 ---LANAITVST-------------GVKAVSIHGEKSMTERREIMQSFMVGEFPVVVATG 444
Query: 422 VSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDL 478
V RG+D VR +I +D P EYVH++GR +R+GE+G++++F+ ++ +L
Sbjct: 445 VLGRGVDLLGVRQVIVFDMPNSINEYVHQIGRASRMGEEGQAIVFVNDENKNVFPEL 501
>Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688386-16681429 | 20130731
Length = 579
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 182/412 (44%), Gaps = 84/412 (20%)
Query: 71 VQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFALVLVPTRE 130
+Q + + GR + A TGTGKT+A+ PI+ + ++ + + ALVL PTRE
Sbjct: 115 IQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNAKNGKRRDPLALVLAPTRE 174
Query: 131 LCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLDHLKKTSS 190
L QV + I + GG ++ ++L G+ I++ TPGR++D LK+ S
Sbjct: 175 LARQVEKEFKDAAPNLEII---SLYGGMPIQQQISKLGSGVDIVVGTPGRVIDLLKR-GS 230
Query: 191 FVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKTQRQNLLL 250
++ +++ DEAD++L++GF + +E IL L S +RQ L+
Sbjct: 231 LKLKDVNYVVLDEADQMLQVGFQEAVETILQKLPS------------------KRQTLMF 272
Query: 251 SATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKYSGKIPTVGD 310
SAT+ + +L + L P+ I L S + ++ SL YS
Sbjct: 273 SATMPSWIKNLTRNYLNKPLTIDLVGDSDQKLADGISL------------YSIASNAYSK 320
Query: 311 YKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTC-DAVDFHYSLLKSF 369
+ V LI H K K +VF T DA + + KS
Sbjct: 321 AGILVPLITEHAK----------------------GGKCIVFTQTKRDADRLSHIMAKSI 358
Query: 370 KFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDF 429
K + LHG++ Q R + F+ +L++TDV++RGLD
Sbjct: 359 KCEA-------------------LHGDISQTQRERTLTGFRNSYFNVLVATDVASRGLDI 399
Query: 430 PKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLF--------LQPIERD 473
P V +I Y+ P + +VHR GRT R G+KG ++L ++ IERD
Sbjct: 400 PNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVHTENQSRDVKTIERD 451
>Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688391-16681206 | 20130731
Length = 558
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 182/412 (44%), Gaps = 84/412 (20%)
Query: 71 VQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFALVLVPTRE 130
+Q + + GR + A TGTGKT+A+ PI+ + ++ + + ALVL PTRE
Sbjct: 115 IQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPILDKIIKFNAKNGKRRDPLALVLAPTRE 174
Query: 131 LCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLDHLKKTSS 190
L QV + I + GG ++ ++L G+ I++ TPGR++D LK+ S
Sbjct: 175 LARQVEKEFKDAAPNLEII---SLYGGMPIQQQISKLGSGVDIVVGTPGRVIDLLKR-GS 230
Query: 191 FVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKTQRQNLLL 250
++ +++ DEAD++L++GF + +E IL L S +RQ L+
Sbjct: 231 LKLKDVNYVVLDEADQMLQVGFQEAVETILQKLPS------------------KRQTLMF 272
Query: 251 SATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKYSGKIPTVGD 310
SAT+ + +L + L P+ I L S + ++ SL YS
Sbjct: 273 SATMPSWIKNLTRNYLNKPLTIDLVGDSDQKLADGISL------------YSIASNAYSK 320
Query: 311 YKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTC-DAVDFHYSLLKSF 369
+ V LI H K K +VF T DA + + KS
Sbjct: 321 AGILVPLITEHAK----------------------GGKCIVFTQTKRDADRLSHIMAKSI 358
Query: 370 KFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDF 429
K + LHG++ Q R + F+ +L++TDV++RGLD
Sbjct: 359 KCEA-------------------LHGDISQTQRERTLTGFRNSYFNVLVATDVASRGLDI 399
Query: 430 PKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLF--------LQPIERD 473
P V +I Y+ P + +VHR GRT R G+KG ++L ++ IERD
Sbjct: 400 PNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVHTENQSRDVKTIERD 451
>Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:27664451-27658107 | 20130731
Length = 513
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 201/459 (43%), Gaps = 87/459 (18%)
Query: 63 LGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFA 122
LG + P VQ IP IL+GRH + TG+GKT A+ PI+ L + + G FA
Sbjct: 70 LGMKTPRRVQQHCIPQILAGRHVIGIDQTGSGKTAAFALPILQRLAEH------TFGVFA 123
Query: 123 LVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLL 182
LV+ PTREL Q+ E L + ++GG + ++ L ++IATPGR+
Sbjct: 124 LVVTPTRELAFQLAEQFRALGSSLRLRI-AVVVGGMDMLRQTKELVARPHLVIATPGRIK 182
Query: 183 DHLKKTSSF--VYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGA 240
LK V+ ++++ DEADR+L++GF +++ I L EN
Sbjct: 183 VLLKDNPEIAPVFARTKFLVLDEADRVLDVGFQDELKFIFQCLP---------EN----- 228
Query: 241 SKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEK 300
RQNL SAT TT++L + E+
Sbjct: 229 ----RQNLFFSAT------------------------------TTSNL------QKLRER 248
Query: 301 YSGKIPTVGDY---KVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCD 357
Y K+ Y K L Q+ V +P + LL IL + E + +VF STC
Sbjct: 249 YQDKLYAFEAYEGFKTVENLKQQVVFIPKNVKDVYLLHILSKM-EDMGIRSAIVFVSTCR 307
Query: 358 AVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALL 417
D H L +E D++ L+ Q R + FK+ +L
Sbjct: 308 --DCHRLNL---------MLEVLDQEA------AALYSFRSQAQRLEALHDFKSGKVPVL 350
Query: 418 LSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQD 477
L+TDV+ RGLD P V +I YD P +Y+HRVGRTAR G G +L + + D +++
Sbjct: 351 LATDVAGRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQNDVDLIRE 410
Query: 478 LE---KHGVSLTEYPLLKVLDYFPLHGQSKHLKKSVFID 513
+E + + + EY +VL +K++ K +D
Sbjct: 411 IETLIERQLEMIEYKENEVLSLMKKVFSAKNVAKMKMMD 449
>Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:11616617-11610718 | 20130731
Length = 523
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 197/418 (47%), Gaps = 73/418 (17%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDG--TF 121
GFE P+ +Q++A P +L GR + AATG+GKT+A+ P I ++ + S G
Sbjct: 120 GFEKPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFGIPAIMHVMNKRKSKGSSKGRNPL 179
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRL 181
L+L PTREL Q+ ++L + + + GG + + + L+ GI I+I TPGR+
Sbjct: 180 CLMLSPTRELAQQISDVLCD-AGKSCGVESVCLYGGTPKGAQISALKSGIDIVIGTPGRI 238
Query: 182 LDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGAS 241
D L + + +++ DEADR+L++GF + + IL G +
Sbjct: 239 QD-LVEMGICRLQEVSFVVLDEADRMLDMGFEQIVRSIL------------------GQT 279
Query: 242 KTQRQNLLLSATLNEKVNHLAKISLE-NPVMIGLDDKSIEPISTTASLDHAEPDEDSEEK 300
+ RQ ++ SAT V+HLA+ ++ NPV + + + + S +H
Sbjct: 280 CSARQMVMFSATWPLAVHHLAQEFMDPNPVKVVVGSEDL-------SANH---------- 322
Query: 301 YSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVD 360
D V+++ + R LL++L+ + + +V+VF V
Sbjct: 323 ---------DVMQIVEVLDERL------RDKRLLALLEK-YHKSQKNRVLVF------VL 360
Query: 361 FHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLST 420
+ + + K +++G G K + + G+ Q R + FK + L+++T
Sbjct: 361 YKWETTRVEKM-----LQQG------GWKAVSISGDKSQHERTKALSLFKNGSCPLMIAT 409
Query: 421 DVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDL 478
DV+ARGLD P V +I + P +YVHR+GRT R G+KG + F + + +L
Sbjct: 410 DVAARGLDIPDVEVVINFSFPLTLEDYVHRIGRTGRAGKKGVAHTFFTHLNKGLAGEL 467
>Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:20515753-20505772 | 20130731
Length = 798
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 207/439 (47%), Gaps = 63/439 (14%)
Query: 62 RLGFEAPTLVQAQAIPVIL-SGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGT 120
+LGF+ PT +Q +P G+ + A TG+GKT+A+ PI+ L + + G
Sbjct: 179 KLGFKEPTPIQKACVPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEREKAESISGV 238
Query: 121 F---------------ALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKA 165
+L++ PTREL LQV + L + + V I+GG K++
Sbjct: 239 NGEEAAEKYATTGLLRSLIIAPTRELALQVAKHLKAVAKHINVRVTA-IVGGILPEKQER 297
Query: 166 RLRKGISILIATPGRLLDHLKKTSSFVYT--NLRWIIFDEADRILELGFGKDIEEILDLL 223
L+ I++ATPGRL + + + +L + + DEADR+++ G K+++ I+D+L
Sbjct: 298 LLKARPEIVVATPGRLWELMSSGEKHLIELHSLSFFVLDEADRMVQSGHFKELQSIIDML 357
Query: 224 G----STRTGCDDQENAVPGAS--KTQRQNLLLSATLNEKVNHLAKI---SLENPVMI-- 272
S+ D +N V +S K +RQ L+ SAT+ + K+ S++ +
Sbjct: 358 PMSNISSEDNSKDAQNCVTVSSIQKKKRQTLVFSATVALSADFRKKLKRGSIQKKQLSTD 417
Query: 273 GLDDKSIEPISTTASLDHAEPDEDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPV 332
GLD SIE +S A + P+ + + P++ K+ I+ + + L
Sbjct: 418 GLD--SIETLSERAGM---RPNAAIIDLTN---PSILAAKIEESFIE-CTEDDKDAHLYY 468
Query: 333 LLSILKHLFEREPSQKVVVFFSTCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILH 392
+L++ + +VF ++ A+ S+L+ LG +
Sbjct: 469 ILTV-------HGQGRTIVFCTSIAALRHISSILR-----------------ILGVNVWT 504
Query: 393 LHGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVG 452
LH M+Q R + F+ ++ +L++TDV+ARGLD P VR ++ Y P A YVHR G
Sbjct: 505 LHAQMQQRARLKAMDRFRENDNGILVATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSG 564
Query: 453 RTARLGEKGESLLFLQPIE 471
RTAR +G S+ + P E
Sbjct: 565 RTARASAEGCSIALISPKE 583
>Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46980468-46984247 | 20130731
Length = 671
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 180/417 (43%), Gaps = 76/417 (18%)
Query: 61 DRLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQS---YDNRIQRS 117
+R + PT VQ AIP+ ++GR + A TG+GKT A+ PII + + R
Sbjct: 155 ERCKYVKPTPVQRYAIPIAVAGRDLMACAQTGSGKTAAFCFPIISGIMKERLASGLLPRG 214
Query: 118 DGT-------FALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKG 170
G AL+L PTREL Q++ K H+ + + GG ++ L +G
Sbjct: 215 GGVDSDVAFPTALILSPTRELSCQIHAEACKFAHQTGVKI-AVVYGGAPIGQQLRILERG 273
Query: 171 ISILIATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGC 230
+ IL+ATPGRL+D +++ ++++ DEADR+L++GF I I+ + G
Sbjct: 274 VDILVATPGRLVDLIER-ERVSLKKIKYLALDEADRMLDMGFEHQIRNIVQQMHMPPPG- 331
Query: 231 DDQENAVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDH 290
RQ LL SAT + + LA L N V + +
Sbjct: 332 -------------DRQTLLFSATFPDNIQKLASDFLSNYVFLAVGRVG------------ 366
Query: 291 AEPDEDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVV 350
S E KI +V D + +L+ + +L + L
Sbjct: 367 -----SSTELIVQKIESVQDMEKRTRLVDLLRRNVVNGKLALTL---------------- 405
Query: 351 VFFSTCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFK 410
VF T D + L F + + +HG+ Q R + ++FK
Sbjct: 406 VFVETKKGADALENWLCRINFPA-----------------IAIHGDKVQMERERALRSFK 448
Query: 411 TENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFL 467
+ ++++TDV++RGLD P V +I +D P + +YVHR+GRT R G+ G + F
Sbjct: 449 RGLTPIMVATDVASRGLDIPHVAHVINFDLPRDIDDYVHRIGRTGRAGQSGLATAFF 505
>Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348854-14341230 | 20130731
Length = 684
Score = 135 bits (341), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 193/415 (46%), Gaps = 89/415 (21%)
Query: 63 LGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYL---QSYDNRIQRSDG 119
+G E PT +Q +P +L G+ ++ + TG+GKT+AYL P++ L + + + +
Sbjct: 127 MGIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEQMNGLVLKPKR 186
Query: 120 TFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPG 179
A+VL PTREL QV+ + + H + GG R +E++ L I +++ TPG
Sbjct: 187 PRAVVLCPTRELSEQVFRVAKAISHHARFRCTMVSGGGRLRPQEES-LSNPIDMVVGTPG 245
Query: 180 RLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPG 239
R+L H+++ + VY ++++++ DEAD + + GFG DI++ L L
Sbjct: 246 RILQHIEE-GNMVYGDIQYVVLDEADTMFDRGFGPDIKKFLAPLKHR------------- 291
Query: 240 ASKTQR---QNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDED 296
ASK Q +L++AT+ + V +L + ++ L S+ + A D
Sbjct: 292 ASKPDSLGFQTVLVTATMTKAVQNLVDEEFQG--IVHLRTSSLHKKISNARHDFI----- 344
Query: 297 SEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPS----QKVVVF 352
K SG ++L LL +L EPS +V+VF
Sbjct: 345 ---KLSG----------------------TENKLDSLLQVL------EPSLAKGNRVMVF 373
Query: 353 FSTCD---AVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAF 409
+T + AVD H+ +EE ++ HG + R + F
Sbjct: 374 CNTLNSSRAVD-HF-------------LEENQ------ISTVNYHGEVPAAQRVENLNKF 413
Query: 410 KTENS--ALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGE 462
K+ N L+ TD++ARGLD V +I +D P + +Y+HR GRTAR+G KG+
Sbjct: 414 KSNNDDCPTLVCTDLAARGLDL-DVDHVIMFDFPLNSIDYLHRTGRTARMGAKGK 467
>Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:20125418-20119486 | 20130731
Length = 681
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 187/424 (44%), Gaps = 81/424 (19%)
Query: 65 FEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDG----T 120
EA +QA IL G + A TG GKT+A++ PI+ L + + R G
Sbjct: 122 IEALFPIQAMTFNTILDGSDLVGRARTGQGKTLAFVLPILESLTNGPAKSVRKTGYGRVP 181
Query: 121 FALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGR 180
+VL+PTREL QVY +L + + GG ++ +LR+G+ I+I TPGR
Sbjct: 182 SVIVLLPTRELANQVYADF-ELYGSSLGLSACAVYGGAPYGAQETKLRRGVDIVIGTPGR 240
Query: 181 LLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGA 240
+ DH+++ + ++L++ + DEAD +L +GF D+E IL +
Sbjct: 241 IKDHIER-GNIDLSHLKFRVLDEADEMLRMGFVDDVELILGKVQDV-------------- 285
Query: 241 SKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEK 300
T+ Q LL SATL V ++ L++ DK TA L
Sbjct: 286 --TKVQTLLFSATLPSWVKQISTKFLKS-------DKK------TADL------------ 318
Query: 301 YSGKIPTVGDYKVPVQLIQRHVKVPCGS--RLPVLLSILKHLFEREPSQKVVVFFSTCDA 358
VG+ K+ RH+ +PC S R ++ I++ + ++F ++
Sbjct: 319 -------VGNEKMKASTNVRHIILPCSSTARAQLIPDIIRCY---SSGGRTIIFAEKKES 368
Query: 359 VDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLL 418
LL + LHG+++Q R + + F++ L+
Sbjct: 369 ASELAGLLPGAR---------------------ALHGDIQQSQREITLKGFRSGKFMTLV 407
Query: 419 STDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDL 478
+T+V+ARGLD V+ IIQ + P + Y+HR GRT R G G +++ P R + +
Sbjct: 408 ATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDP-RRSNIAKI 466
Query: 479 EKHG 482
E+
Sbjct: 467 EREA 470
>Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40426461-40421694 | 20130731
Length = 536
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 165/369 (44%), Gaps = 98/369 (26%)
Query: 185 LKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKTQ 244
+ +T +F + ++ ++ DEADRIL+ GF K++ NA+ +
Sbjct: 1 MDETPNFDCSQMQVLVLDEADRILDSGFKKEV------------------NAIISQLPKR 42
Query: 245 RQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKYSGK 304
RQ +L SAT + V LA++SL++P I + ++S+ TA+
Sbjct: 43 RQTMLFSATQTKSVQDLARLSLKDPEYISVHEESV-----TAT----------------- 80
Query: 305 IPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDFHYS 364
P L Q + VP +L +L + +K R K +VF S+C V F +
Sbjct: 81 ---------PTLLKQTVMIVPLDQKLDMLWTFIK----RHLQSKTLVFLSSCKQVKFVFE 127
Query: 365 LLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDVSA 424
+ K +P I L C LHG M+QE R + F E ++L STDV+A
Sbjct: 128 VFKKL----HPGIP-------LKC----LHGRMKQEKRMAIYSEFCEEKRSVLFSTDVAA 172
Query: 425 RGLDFPK-VRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEKHGV 483
RGLDF K V ++Q DCP Y+HRVGRTAR G+S+LFL P E + L+ V
Sbjct: 173 RGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYNSVGKSVLFLLPSETMMHEKLKAAKV 232
Query: 484 SLTEYPLLKVLDYFPLHGQSKHLKKSVFIDSHPWVLCLQKA---LESFITSKPKLDELAK 540
P+H Q P LQ L S + P+L + A+
Sbjct: 233 --------------PVHCQK------------PRKELLQPVSSLLASLLVKYPELQQRAQ 266
Query: 541 RAFCSWVRA 549
RAF +++R+
Sbjct: 267 RAFVTYLRS 275
>Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28977519-28970435 | 20130731
Length = 514
Score = 132 bits (333), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 184/428 (42%), Gaps = 84/428 (19%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GFE P+ +Q ++IP+ L+G L A GTGKT A+ P + + +N IQ +
Sbjct: 159 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDNNIIQ------VV 212
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLD 183
+LVPTREL LQ ++ K L + I GG + + RL + + +L+ TPGR+LD
Sbjct: 213 ILVPTRELALQTSQV-CKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 271
Query: 184 HLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKT 243
L K V + ++ DEAD++L F IE+++ L T
Sbjct: 272 -LAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLPPT----------------- 313
Query: 244 QRQNLLLSATLNEKVNHLAKISLENPVMIGL-DDKSIEPISTTASLDHAEPDEDSEEKYS 302
RQ L+ SAT V L P +I L D+ +++ I+ +
Sbjct: 314 -RQILMFSATFPVTVKDFKDRYLRKPYIINLMDELTLKGITQFYA--------------- 357
Query: 303 GKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDFH 362
++ KV C L LF + + ++F C++V+
Sbjct: 358 --------------FVEERQKVHC----------LNTLFSKLQINQSIIF---CNSVNRV 390
Query: 363 YSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDV 422
L K +I E LG ++H M Q++R F F+ L+ TD+
Sbjct: 391 ELLAK--------KITE------LGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 436
Query: 423 SARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEKH- 481
RG+D V +I +D P + Y+HRVGR+ R G G ++ + +R L +E+
Sbjct: 437 FTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQEL 496
Query: 482 GVSLTEYP 489
G + + P
Sbjct: 497 GTEIKQIP 504
>Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:29001486-28993339 | 20130731
Length = 516
Score = 132 bits (333), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 184/428 (42%), Gaps = 84/428 (19%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GFE P+ +Q ++IP+ L+G L A GTGKT A+ P + + +N IQ +
Sbjct: 161 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDNNIIQ------VV 214
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLD 183
+LVPTREL LQ ++ K L + I GG + + RL + + +L+ TPGR+LD
Sbjct: 215 ILVPTRELALQTSQV-CKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 273
Query: 184 HLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKT 243
L K V + ++ DEAD++L F IE+++ L T
Sbjct: 274 -LAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLPPT----------------- 315
Query: 244 QRQNLLLSATLNEKVNHLAKISLENPVMIGL-DDKSIEPISTTASLDHAEPDEDSEEKYS 302
RQ L+ SAT V L P +I L D+ +++ I+ +
Sbjct: 316 -RQILMFSATFPVTVKDFKDRYLRKPYIINLMDELTLKGITQFYA--------------- 359
Query: 303 GKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDFH 362
++ KV C L LF + + ++F C++V+
Sbjct: 360 --------------FVEERQKVHC----------LNTLFSKLQINQSIIF---CNSVNRV 392
Query: 363 YSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDV 422
L K +I E LG ++H M Q++R F F+ L+ TD+
Sbjct: 393 ELLAK--------KITE------LGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 438
Query: 423 SARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEKH- 481
RG+D V +I +D P + Y+HRVGR+ R G G ++ + +R L +E+
Sbjct: 439 FTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQEL 498
Query: 482 GVSLTEYP 489
G + + P
Sbjct: 499 GTEIKQIP 506
>Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28990557-28982494 | 20130731
Length = 523
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 183/428 (42%), Gaps = 84/428 (19%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GFE P+ +Q ++IP+ L+G L A GTGKT A+ P + + N IQ +
Sbjct: 168 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDKNVIQ------VV 221
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLD 183
+LVPTREL LQ ++ K L + I GG + + RL + + +L+ TPGR+LD
Sbjct: 222 ILVPTRELALQTSQV-CKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 280
Query: 184 HLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKT 243
L K V + ++ DEAD++L F IE+++ L S
Sbjct: 281 -LAKKGVCVLKDCSMLVMDEADKLLSPEFKPSIEQLIQFLPSN----------------- 322
Query: 244 QRQNLLLSATLNEKVNHLAKISLENPVMIGL-DDKSIEPISTTASLDHAEPDEDSEEKYS 302
RQ LL SAT V L P +I L D+ +++ I+ +
Sbjct: 323 -RQILLFSATFPVTVKDFNDRYLRKPYIINLMDELTLKGITQFYA--------------- 366
Query: 303 GKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDFH 362
++ KV C L LF + + ++F C++V+
Sbjct: 367 --------------FVEERQKVHC----------LNTLFSKLQINQSIIF---CNSVNRV 399
Query: 363 YSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDV 422
L K +I E LG ++H M Q++R F F+ L+ TD+
Sbjct: 400 ELLAK--------KITE------LGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 445
Query: 423 SARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEKH- 481
RG+D V +I +D P + Y+HRVGR+ R G G ++ + +R L +E+
Sbjct: 446 FTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLVTYEDRFNLYRIEQEL 505
Query: 482 GVSLTEYP 489
G + + P
Sbjct: 506 GTEIKQIP 513
>Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25904178-25909316 | 20130731
Length = 535
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 168/367 (45%), Gaps = 94/367 (25%)
Query: 185 LKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKTQ 244
+ +T +F + ++ ++ DEADRIL+ GF K++ NA+ +
Sbjct: 1 MDETPNFDCSKMQVLVLDEADRILDSGFKKEL------------------NAIISQLPKR 42
Query: 245 RQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKYSGK 304
RQ +L SAT + V LA++SL++P I + ++S+ TA+
Sbjct: 43 RQTMLFSATQTKSVQDLARLSLKDPEYISVHEESV-----TAT----------------- 80
Query: 305 IPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILK-HLFEREPSQKVVVFFSTCDAVDFHY 363
P L Q+ + VP +L +L + +K HL K +VF S+C V F +
Sbjct: 81 ---------PTLLKQKVMIVPLDQKLDMLWNFIKTHL-----KSKTLVFLSSCKQVKFVF 126
Query: 364 SLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDVS 423
E K++ G + LHG M+QE R + F E ++L +TDV+
Sbjct: 127 ---------------EAFKKLHPGIPLKCLHGRMKQEKRMAIYSEF-CEKCSILFATDVA 170
Query: 424 ARGLDFPK-VRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEKHG 482
ARGLDF + V ++Q DCP Y+HRVGRTAR G+S+L+L P E L+ LE
Sbjct: 171 ARGLDFNRAVDWVVQVDCPENVASYIHRVGRTARYKSLGKSVLYLLPSETKMLEKLEAGK 230
Query: 483 VSLTEYPLLKVLDYFPLHGQSKHLKKSVFIDSHPWVLCLQKALESFITSKPKLDELAKRA 542
V P+H K K+ + + L S + P+L + A+RA
Sbjct: 231 V--------------PVHYPPKPRKE--------LLQPVSSLLASLLVKYPELQQQAQRA 268
Query: 543 FCSWVRA 549
F +++R+
Sbjct: 269 FVTYLRS 275
>Medtr4g105100.5 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 172/375 (45%), Gaps = 79/375 (21%)
Query: 56 CDQLRDRLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQ 115
C + +LGF PT +QAQ P+ L+GR + A TG+GKT++YL P I ++ S R+
Sbjct: 212 CLDVIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHV-SAQPRLV 270
Query: 116 RSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILI 175
+ +G LVL PTREL +Q+ + +K R + I I GG + + LR G+ I+I
Sbjct: 271 QGEGPVVLVLAPTRELAVQIQQEAMKFGSRSN-IRCTCIYGGAPKGPQIRDLRMGVEIVI 329
Query: 176 ATPGRLLDHLKKTSSFVYTNLR---WIIFDEADRILELGFGKDIEEILDLLGSTRTGCDD 232
ATPGRL+D L+ +TNL+ +++ DEADR+L++GF I +I++ +
Sbjct: 330 ATPGRLIDMLEAQ----HTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQI--------- 376
Query: 233 QENAVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAE 292
+ RQ L SAT ++V LA+ L NP + + ++ S++
Sbjct: 377 ---------RPDRQTLYWSATWPKEVESLARQFLHNPYKVVIGSPYLK---ANQSINQVV 424
Query: 293 PDEDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVF 352
EKY+ L+ +LK + + ++++F
Sbjct: 425 EVVTDMEKYNR-----------------------------LIKLLKEVMD---GSRILIF 452
Query: 353 FSTCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTE 412
T D + + + +P L +HG+ Q R FK+
Sbjct: 453 TETKKGCD---QVTRQLRMDGWPA--------------LSIHGDKNQAERDWVLAEFKSG 495
Query: 413 NSALLLSTDVSARGL 427
S ++ +TDV+ARGL
Sbjct: 496 RSPIMTATDVAARGL 510
>Medtr4g105100.3 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 172/375 (45%), Gaps = 79/375 (21%)
Query: 56 CDQLRDRLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQ 115
C + +LGF PT +QAQ P+ L+GR + A TG+GKT++YL P I ++ S R+
Sbjct: 212 CLDVIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHV-SAQPRLV 270
Query: 116 RSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILI 175
+ +G LVL PTREL +Q+ + +K R + I I GG + + LR G+ I+I
Sbjct: 271 QGEGPVVLVLAPTRELAVQIQQEAMKFGSRSN-IRCTCIYGGAPKGPQIRDLRMGVEIVI 329
Query: 176 ATPGRLLDHLKKTSSFVYTNLR---WIIFDEADRILELGFGKDIEEILDLLGSTRTGCDD 232
ATPGRL+D L+ +TNL+ +++ DEADR+L++GF I +I++ +
Sbjct: 330 ATPGRLIDMLEAQ----HTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQI--------- 376
Query: 233 QENAVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAE 292
+ RQ L SAT ++V LA+ L NP + + ++ S++
Sbjct: 377 ---------RPDRQTLYWSATWPKEVESLARQFLHNPYKVVIGSPYLK---ANQSINQVV 424
Query: 293 PDEDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVF 352
EKY+ L+ +LK + + ++++F
Sbjct: 425 EVVTDMEKYNR-----------------------------LIKLLKEVMD---GSRILIF 452
Query: 353 FSTCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTE 412
T D + + + +P L +HG+ Q R FK+
Sbjct: 453 TETKKGCD---QVTRQLRMDGWPA--------------LSIHGDKNQAERDWVLAEFKSG 495
Query: 413 NSALLLSTDVSARGL 427
S ++ +TDV+ARGL
Sbjct: 496 RSPIMTATDVAARGL 510
>Medtr4g105100.4 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 172/375 (45%), Gaps = 79/375 (21%)
Query: 56 CDQLRDRLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQ 115
C + +LGF PT +QAQ P+ L+GR + A TG+GKT++YL P I ++ S R+
Sbjct: 212 CLDVIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHV-SAQPRLV 270
Query: 116 RSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILI 175
+ +G LVL PTREL +Q+ + +K R + I I GG + + LR G+ I+I
Sbjct: 271 QGEGPVVLVLAPTRELAVQIQQEAMKFGSRSN-IRCTCIYGGAPKGPQIRDLRMGVEIVI 329
Query: 176 ATPGRLLDHLKKTSSFVYTNLR---WIIFDEADRILELGFGKDIEEILDLLGSTRTGCDD 232
ATPGRL+D L+ +TNL+ +++ DEADR+L++GF I +I++ +
Sbjct: 330 ATPGRLIDMLEAQ----HTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQI--------- 376
Query: 233 QENAVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAE 292
+ RQ L SAT ++V LA+ L NP + + ++ S++
Sbjct: 377 ---------RPDRQTLYWSATWPKEVESLARQFLHNPYKVVIGSPYLK---ANQSINQVV 424
Query: 293 PDEDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVF 352
EKY+ L+ +LK + + ++++F
Sbjct: 425 EVVTDMEKYNR-----------------------------LIKLLKEVMD---GSRILIF 452
Query: 353 FSTCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTE 412
T D + + + +P L +HG+ Q R FK+
Sbjct: 453 TETKKGCD---QVTRQLRMDGWPA--------------LSIHGDKNQAERDWVLAEFKSG 495
Query: 413 NSALLLSTDVSARGL 427
S ++ +TDV+ARGL
Sbjct: 496 RSPIMTATDVAARGL 510
>Medtr4g105100.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 523
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 172/375 (45%), Gaps = 79/375 (21%)
Query: 56 CDQLRDRLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQ 115
C + +LGF PT +QAQ P+ L+GR + A TG+GKT++YL P I ++ S R+
Sbjct: 212 CLDVIAKLGFVEPTPIQAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHV-SAQPRLV 270
Query: 116 RSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILI 175
+ +G LVL PTREL +Q+ + +K R + I I GG + + LR G+ I+I
Sbjct: 271 QGEGPVVLVLAPTRELAVQIQQEAMKFGSRSN-IRCTCIYGGAPKGPQIRDLRMGVEIVI 329
Query: 176 ATPGRLLDHLKKTSSFVYTNLR---WIIFDEADRILELGFGKDIEEILDLLGSTRTGCDD 232
ATPGRL+D L+ +TNL+ +++ DEADR+L++GF I +I++ +
Sbjct: 330 ATPGRLIDMLEAQ----HTNLQRVTYLVLDEADRMLDMGFEPQIRKIVNQI--------- 376
Query: 233 QENAVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAE 292
+ RQ L SAT ++V LA+ L NP + + ++ S++
Sbjct: 377 ---------RPDRQTLYWSATWPKEVESLARQFLHNPYKVVIGSPYLK---ANQSINQVV 424
Query: 293 PDEDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVF 352
EKY+ L+ +LK + + ++++F
Sbjct: 425 EVVTDMEKYNR-----------------------------LIKLLKEVMD---GSRILIF 452
Query: 353 FSTCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTE 412
T D + + + +P L +HG+ Q R FK+
Sbjct: 453 TETKKGCD---QVTRQLRMDGWPA--------------LSIHGDKNQAERDWVLAEFKSG 495
Query: 413 NSALLLSTDVSARGL 427
S ++ +TDV+ARGL
Sbjct: 496 RSPIMTATDVAARGL 510
>Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:46249372-46245255 | 20130731
Length = 641
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 191/438 (43%), Gaps = 103/438 (23%)
Query: 59 LRDRL---GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYL-------- 107
LR++L G E+ +QA +IL G + A TG GKT+A++ PI+ +
Sbjct: 54 LREKLKEKGIESLFPIQAMTFDIILQGCDLVGRARTGQGKTLAFVLPILESVTNGKAKET 113
Query: 108 -----QSYDNRIQRSDGTFA-------LVLVPTRELCLQV---YEILVKLLHRFHWIVPG 152
++ N + G + LVL+PTREL QV +E+ + +
Sbjct: 114 NAKTKETNGNARESRKGGYGGPPKPSVLVLLPTRELACQVNADFEVYGGAM----GLTSC 169
Query: 153 YIMGGENRSKEKARLRKGISILIATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGF 212
+ GG ++ +L +G+ I+I TPGR+ DH+ + S + L++ + DEAD +L +GF
Sbjct: 170 CLYGGAPYKAQEIKLERGVDIVIGTPGRIKDHIVR-GSIDLSQLKFRVLDEADEMLRMGF 228
Query: 213 GKDIEEILDLLGSTRTGCDDQENAVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMI 272
+D+E IL + + Q Q LL SATL E V ++AK L+
Sbjct: 229 VEDVELILGKVKNV----------------DQVQTLLFSATLPEWVKNIAKRFLK----- 267
Query: 273 GLDDKSIEPISTTASLDHAEPDEDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPC-GSRLP 331
+DK TA L VG+ K+ RH +PC G+
Sbjct: 268 --EDKQ------TADL-------------------VGNTKMKASTSVRHYILPCTGAARS 300
Query: 332 VLLSILKHLFEREPSQKVVVFFSTCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKIL 391
L+ + + E + ++F T ++ LL +
Sbjct: 301 QLIPDIIRCYSSE--GRTIIFTETKESASQLAELLPGAR--------------------- 337
Query: 392 HLHGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRV 451
LHG+++Q R + F+ L++T+V+ARGLD V+ IIQ + P + Y+HR
Sbjct: 338 ALHGDIQQAQREVTLSGFRYGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRS 397
Query: 452 GRTARLGEKGESLLFLQP 469
GRT R G G +++ P
Sbjct: 398 GRTGRAGNTGVAVMLYDP 415
>Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:15371233-15366440 | 20130731
Length = 406
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 188/430 (43%), Gaps = 84/430 (19%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GFE P+ +Q +A+ I+ GR + A +GTGKT + + + +Q AL
Sbjct: 52 GFEKPSAIQQRAVAPIIQGRDVIAQAQSGTGKTSMIALTVCQVVDTSVREVQ------AL 105
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLD 183
++ PTREL Q ++++ + F I +GG++ ++ +L G+ ++ TPGR+ D
Sbjct: 106 IVSPTRELASQTEKVILT-IGDFINIQAHACIGGKSVGEDIRKLEHGVHVVSGTPGRVCD 164
Query: 184 HLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKT 243
+K+ + ++ ++ DE+D +L GF I ++ L C
Sbjct: 165 MIKR-RTLRTRAIKLLVLDESDEMLSRGFKDQIYDVYRYLPPDLQVC------------- 210
Query: 244 QRQNLLLSATLNEKVNHLAKISLENPV--MIGLDDKSIEPISTTASLDHAEPDEDSEEKY 301
L+SATL ++ + + +PV ++ D+ ++E I + E+
Sbjct: 211 -----LISATLPHEILEMTNKFMTDPVRILVKRDELTLEGIKQFFV---------AVERE 256
Query: 302 SGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDF 361
K T+ D L++ + V+F +T VD+
Sbjct: 257 EWKFDTLCD-----------------------------LYDTLTITQAVIFCNTKRKVDW 287
Query: 362 HYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTD 421
+++ F+ + +HG+M Q R F+ + +L++TD
Sbjct: 288 LTEKMRNNNFT-----------------VSAMHGDMPQRERDAIMGEFRAGTTRVLITTD 330
Query: 422 VSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEK- 480
V ARGLD +V +I YD P Y+HR+GR+ R G KG ++ F++ + L+D+E+
Sbjct: 331 VWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQY 390
Query: 481 HGVSLTEYPL 490
+ + E P+
Sbjct: 391 YSTQIDEMPM 400
>Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6253262-6248871 | 20130731
Length = 413
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 191/429 (44%), Gaps = 84/429 (19%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GFE P+ +Q + I G + A +GTGKT + + I+ L + Q AL
Sbjct: 59 GFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQ------AL 112
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLD 183
VL PTREL Q+ E +++ L F + +GG + +++ L+ G+ ++ TPGR+ D
Sbjct: 113 VLAPTRELAQQI-EKVMRALGDFLGVKVHACVGGTSVREDQRILQAGVHTVVGTPGRVFD 171
Query: 184 HLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKT 243
L++ S ++ + DEAD +L GF I +I L PG
Sbjct: 172 MLRR-QSLRSECIKMFVLDEADEMLSRGFKDQIYDIFQQL--------------PG---- 212
Query: 244 QRQNLLLSATLNEKVNHLAKISLENPV--MIGLDDKSIEPISTTASLDHAEPDEDSEEKY 301
+ Q + SAT+ + + + + PV ++ D+ ++E I + D EE
Sbjct: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIK------QFYVNVDKEE-- 264
Query: 302 SGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDF 361
K+ T+ D L+E + V+F +T VD+
Sbjct: 265 -WKLETLCD-----------------------------LYETLAITQSVIFVNTRRKVDW 294
Query: 362 HYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTD 421
++S + + HG+M+Q R + F++ +S +L++TD
Sbjct: 295 LTDKMRSRDHT-----------------VSATHGDMDQNTRDIIMREFRSGSSRVLITTD 337
Query: 422 VSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEK- 480
+ ARG+D +V +I YD P + Y+HR+GR+ R G KG S+ F+ + L D++K
Sbjct: 338 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTGEDARMLADIQKF 397
Query: 481 HGVSLTEYP 489
+ V++ E P
Sbjct: 398 YNVTIEELP 406
>Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52325320-52330070 | 20130731
Length = 413
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 191/429 (44%), Gaps = 84/429 (19%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GFE P+ +Q + I G + A +GTGKT + + ++ L + Q AL
Sbjct: 59 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYNVTQCQ------AL 112
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLD 183
VL PTREL Q+ E +++ L + + +GG + +++ L G+ +++ TPGR+ D
Sbjct: 113 VLAPTRELAQQI-EKVMRALGDYLGVKVHACVGGTSVREDQRILSTGVHVVVGTPGRVFD 171
Query: 184 HLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKT 243
L++ S ++ + DEAD +L GF I +I LL PG
Sbjct: 172 MLRR-QSLHPDYIKMFVLDEADEMLSRGFKDQIYDIFQLL--------------PG---- 212
Query: 244 QRQNLLLSATLNEKVNHLAKISLENPV--MIGLDDKSIEPISTTASLDHAEPDEDSEEKY 301
+ Q + SAT+ + + + + PV ++ D+ ++E I + EK
Sbjct: 213 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYV---------NVEKE 263
Query: 302 SGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDF 361
K+ T+ D L+E + V+F +T VD+
Sbjct: 264 EWKLDTLCD-----------------------------LYETLAITQSVIFVNTRRKVDW 294
Query: 362 HYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTD 421
++S + + HG+M+Q R + F++ +S +L++TD
Sbjct: 295 LTDKMRSRDHT-----------------VSATHGDMDQNTRDIIMREFRSGSSRVLITTD 337
Query: 422 VSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEK- 480
+ ARG+D +V +I +D P + Y+HR+GR+ R G KG ++ F+ + L+D++K
Sbjct: 338 LLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTKEDEGMLRDIQKF 397
Query: 481 HGVSLTEYP 489
+ V + E P
Sbjct: 398 YNVLVEELP 406
>Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52326072-52330070 | 20130731
Length = 430
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 191/429 (44%), Gaps = 84/429 (19%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GFE P+ +Q + I G + A +GTGKT + + ++ L + Q AL
Sbjct: 76 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYNVTQCQ------AL 129
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLD 183
VL PTREL Q+ E +++ L + + +GG + +++ L G+ +++ TPGR+ D
Sbjct: 130 VLAPTRELAQQI-EKVMRALGDYLGVKVHACVGGTSVREDQRILSTGVHVVVGTPGRVFD 188
Query: 184 HLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKT 243
L++ S ++ + DEAD +L GF I +I LL PG
Sbjct: 189 MLRR-QSLHPDYIKMFVLDEADEMLSRGFKDQIYDIFQLL--------------PG---- 229
Query: 244 QRQNLLLSATLNEKVNHLAKISLENPV--MIGLDDKSIEPISTTASLDHAEPDEDSEEKY 301
+ Q + SAT+ + + + + PV ++ D+ ++E I + EK
Sbjct: 230 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYV---------NVEKE 280
Query: 302 SGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDF 361
K+ T+ D L+E + V+F +T VD+
Sbjct: 281 EWKLDTLCD-----------------------------LYETLAITQSVIFVNTRRKVDW 311
Query: 362 HYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTD 421
++S + + HG+M+Q R + F++ +S +L++TD
Sbjct: 312 LTDKMRSRDHT-----------------VSATHGDMDQNTRDIIMREFRSGSSRVLITTD 354
Query: 422 VSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEK- 480
+ ARG+D +V +I +D P + Y+HR+GR+ R G KG ++ F+ + L+D++K
Sbjct: 355 LLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTKEDEGMLRDIQKF 414
Query: 481 HGVSLTEYP 489
+ V + E P
Sbjct: 415 YNVLVEELP 423
>Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 181/412 (43%), Gaps = 92/412 (22%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GFE P+ VQ + IP + G + A +G GKT ++ + + ++ AL
Sbjct: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVS------AL 118
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVP----GYIMGGENRSKEKARLRKGI-SILIATP 178
VL TREL Q+ RF +P GG N K L+ I++ TP
Sbjct: 119 VLCHTRELAYQI----CHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPQIVVGTP 174
Query: 179 GRLLDHLKKTSSFVYTNLRWIIFDEADRILE-LGFGKDIEEILDLLGSTRTGCDDQENAV 237
GR+L L + + N+R + DE D++LE L KD+++I L
Sbjct: 175 GRIL-ALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKL--------------- 218
Query: 238 PGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDS 297
+ +Q ++ SATL++++ + K +++P+ I +DD++
Sbjct: 219 ---TPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEA------------------- 256
Query: 298 EEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCD 357
K+ G L+Q ++K L E E ++K+ D
Sbjct: 257 ------KLTLHG-------LVQHYIK----------------LKEEEKNRKLNDLL---D 284
Query: 358 AVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKI--LHLHGNMEQENRRTSFQAFKTENSA 415
A+DF+ ++ S +++ ++ + C + +H M QE R ++ FK +S
Sbjct: 285 ALDFNQVVIFVKSVSRAAELD----RLLIECNFPSICIHSGMSQEERLKRYRGFKEGHSR 340
Query: 416 LLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFL 467
+L++TD+ RG+D +V +I YD P A Y+HRVGR R G KG ++ F+
Sbjct: 341 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 392
>Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 181/412 (43%), Gaps = 92/412 (22%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GFE P+ VQ + IP + G + A +G GKT ++ + + ++ AL
Sbjct: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVS------AL 118
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVP----GYIMGGENRSKEKARLRKGI-SILIATP 178
VL TREL Q+ RF +P GG N K L+ I++ TP
Sbjct: 119 VLCHTRELAYQI----CHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPQIVVGTP 174
Query: 179 GRLLDHLKKTSSFVYTNLRWIIFDEADRILE-LGFGKDIEEILDLLGSTRTGCDDQENAV 237
GR+L L + + N+R + DE D++LE L KD+++I L
Sbjct: 175 GRIL-ALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKL--------------- 218
Query: 238 PGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDS 297
+ +Q ++ SATL++++ + K +++P+ I +DD++
Sbjct: 219 ---TPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEA------------------- 256
Query: 298 EEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCD 357
K+ G L+Q ++K L E E ++K+ D
Sbjct: 257 ------KLTLHG-------LVQHYIK----------------LKEEEKNRKLNDLL---D 284
Query: 358 AVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKI--LHLHGNMEQENRRTSFQAFKTENSA 415
A+DF+ ++ S +++ ++ + C + +H M QE R ++ FK +S
Sbjct: 285 ALDFNQVVIFVKSVSRAAELD----RLLIECNFPSICIHSGMSQEERLKRYRGFKEGHSR 340
Query: 416 LLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFL 467
+L++TD+ RG+D +V +I YD P A Y+HRVGR R G KG ++ F+
Sbjct: 341 ILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 392
>Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:2463886-2455302 | 20130731
Length = 427
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 178/408 (43%), Gaps = 84/408 (20%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GFE P+ VQ + IP + G L A +G GKT ++ + + ++ AL
Sbjct: 65 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLSTLQQIDPVPGQVS------AL 118
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGI-SILIATPGRLL 182
+L TREL Q+ + + GG N K L+ I++ TPGR+L
Sbjct: 119 ILCHTRELAYQICHEFERFSTYLADLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRIL 178
Query: 183 DHLKKTSSFVYTNLRWIIFDEADRILE-LGFGKDIEEILDLLGSTRTGCDDQENAVPGAS 241
L + N+R I DE D++LE L KD+++I + +
Sbjct: 179 -ALARDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKM------------------T 219
Query: 242 KTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEEKY 301
+Q ++ SATL++++ + K +++P+ I +DD++
Sbjct: 220 PHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEA----------------------- 256
Query: 302 SGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDF 361
K+ G L+Q ++K L E E ++K+ DA+DF
Sbjct: 257 --KLTLHG-------LVQHYIK----------------LKEEEKNRKLNDLL---DALDF 288
Query: 362 HYSLLKSFKFSSYPQIEEGDKQMFLGCKI--LHLHGNMEQENRRTSFQAFKTENSALLLS 419
+ ++ S +++ ++ + C + +H M QE R ++ FK ++ +L++
Sbjct: 289 NQVVIFVKSVSRAAELD----KLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVA 344
Query: 420 TDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFL 467
TD+ RG+D +V +I YD P A Y+HRVGR R G KG ++ F+
Sbjct: 345 TDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 392
>Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:2449773-2458512 | 20130731
Length = 504
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 180/413 (43%), Gaps = 94/413 (22%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GFE P+ VQ + IP + G + A +G GKT ++ + + ++ AL
Sbjct: 142 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVA------AL 195
Query: 124 VLVPTRELCLQV-YEILVKLLHRFHWIVP----GYIMGGENRSKEKARLRKGIS-ILIAT 177
VL TREL Q+ +E+ RF +P GG N K L+ I++ T
Sbjct: 196 VLCHTRELAYQICHEV-----ERFSTYLPDIKVAVFYGGVNIKVHKDLLKNECPHIVVGT 250
Query: 178 PGRLLDHLKKTSSFVYTNLRWIIFDEADRILE-LGFGKDIEEILDLLGSTRTGCDDQENA 236
PGR+L L + N+R I DE D++LE L KD++EI L
Sbjct: 251 PGRIL-ALTRDKDLGLKNVRHFILDECDKMLESLDMRKDVQEIFKL-------------- 295
Query: 237 VPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDED 296
+ +Q ++ SATL++++ + K +++P+ I +DD++
Sbjct: 296 ----TPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEA------------------ 333
Query: 297 SEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTC 356
K+ G L+Q ++K L E E ++K+
Sbjct: 334 -------KLTLHG-------LVQHYIK----------------LQEPEKNRKL---NDLL 360
Query: 357 DAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKI--LHLHGNMEQENRRTSFQAFKTENS 414
DA+DF+ ++ S ++ ++ + C + +H M QE R ++ FK
Sbjct: 361 DALDFNQVVIFVKSVSRAAEL----NKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQ 416
Query: 415 ALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFL 467
+L++TD+ RG+D +V +I YD P A Y+HRVGR R G KG ++ F+
Sbjct: 417 RILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFV 469
>Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:37010922-37003111 | 20130731
Length = 604
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 127/499 (25%), Positives = 210/499 (42%), Gaps = 128/499 (25%)
Query: 65 FEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYD-NRIQRSDGTFAL 123
E PT +Q AIP+IL G+ + A TG+GKT+AYL P++ L + + +R + + F
Sbjct: 45 IEKPTPIQHVAIPLILEGKDVVARAKTGSGKTLAYLLPLLQKLFTANVDRKKLAPNVF-- 102
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKE-KARLRKGISILIATPGRLL 182
VL P+RELC Q+Y + LL + + + + +A L +LI+TP +
Sbjct: 103 VLAPSRELCQQIYVEVKSLLELCKVPLKAVQLNSNMLATDLQAALVGPPDVLISTPACIA 162
Query: 183 DHLKKT---SSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPG 239
L + ++ + +L ++ DEAD +L G+ DI+ + + + C
Sbjct: 163 KCLSNSVLQAASINGSLETLVLDEADLLLSYGYENDIKALTPHIPRS---C--------- 210
Query: 240 ASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEE 299
Q LL+SAT ++ V+ L K+ L NPV++ L
Sbjct: 211 ------QCLLMSATSSDDVDKLKKLMLHNPVILTL------------------------- 239
Query: 300 KYSGKIPTVGDYK---VPVQLIQRHVKVPCGSRLPVLLSILK-HLFEREPSQKVVVFFST 355
P VG+ K +P + Q + P +L +L++LK L ++ KV++F +
Sbjct: 240 ------PEVGNRKDEVIPKNVQQFWIYCPANDKLLYILAMLKLELVQK----KVLIFTNN 289
Query: 356 CDAVDFHYSLLKSFKFSSYPQIEEGDKQMFL---GCKILHLHGNMEQENRRTSFQAFKTE 412
D SF+ ++FL G K L+ + Q +R + F
Sbjct: 290 IDT---------SFRL-----------KLFLEKFGIKSAVLNAELPQNSRLHILEEFNAG 329
Query: 413 NSALLLSTDVS---------------------------------ARGLDFPKVRCIIQYD 439
L++TD+S RG+DF V +I ++
Sbjct: 330 LFDYLIATDISQSTEKDEAPKENIVGSKKSRKYTKLKLDSEFGVVRGIDFKNVYTVINFE 389
Query: 440 CPGEATEYVHRVGRTARLGEKGESLLFLQPIE-------RDYLQDLEKHGV-SLTEYPLL 491
P T YVHR+GRT R G S+ + E R ++ D E +G S+ E+PLL
Sbjct: 390 MPRSVTGYVHRIGRTGRAYSSGTSISLVSTDEMDTFEEVRSFVGDNENNGSNSIAEFPLL 449
Query: 492 KVLDYFPLHGQSKHLKKSV 510
L +++ + KSV
Sbjct: 450 TKSAVESLRYRAEDVAKSV 468
>Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:33157541-33150855 | 20130731
Length = 497
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 183/434 (42%), Gaps = 112/434 (25%)
Query: 83 RHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFALVLVPTRELCLQVYEILVKL 142
R VN+ TG+GKT+AY P++ L + R ALV+VPTR+L LQV ++ +
Sbjct: 70 RDICVNSPTGSGKTLAYALPLVQMLSGRVTKCLR-----ALVVVPTRDLALQVKQVFDAV 124
Query: 143 LHRFHWIVPGYIMGGENRSKEKA----------------------RLRKGISILIATPGR 180
V G +G + + E + R + + IL+ATPGR
Sbjct: 125 ASPLGLRV-GLAVGQSSLADEISELVEMPARDIGTCYDPHCISLPRFQSKVDILVATPGR 183
Query: 181 LLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGA 240
L+DH+ T F +L +++ DE DR+L + + +L+L+ S +D ++P A
Sbjct: 184 LMDHINTTIGFTLEHLYYLVVDETDRLLREAYQSWLPTVLELIQS-----NDDGFSLPSA 238
Query: 241 S---------KTQRQ----------------NLLLSATLNEKVNHLAKISLENPVMIGLD 275
S +T+R+ ++LSATL + L +++L +P+++
Sbjct: 239 SFFPCSASALRTRRRCGVERGFKDKPYPRLAKMVLSATLTQDPGRLIQLNLHHPLLLK-- 296
Query: 276 DKSIEPISTTASLDHAEPDEDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRL-PV-L 333
+G++ Y++P L K+ C ++ P+ L
Sbjct: 297 --------------------------AGQM----RYRLPENL--ESYKLICEKKVKPLYL 324
Query: 334 LSILKHLFEREPSQKVVVFFSTCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHL 393
+++LK L E +K +VF + D+ LL F+ L I
Sbjct: 325 IALLKSLGE----EKCLVFTKSVDSTHRLCQLLNCFE--------------DLRIDIKEY 366
Query: 394 HGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGR 453
Q R + F+ +LLS+D RG+D VR +I YD P +VHR GR
Sbjct: 367 SSLQHQRVRSKTLNEFRKGVFQVLLSSDALTRGMDVEGVRNVINYDVPKFIKTHVHRAGR 426
Query: 454 TARLGEKGESLLFL 467
TAR G+ G +
Sbjct: 427 TARAGQTGRCFTLM 440
>Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 184/436 (42%), Gaps = 84/436 (19%)
Query: 56 CDQLRDRLGFEAPTLVQAQAIPVILSGRHALVNAATG-TGKTIAYLAPIIHYLQSYDNRI 114
C+++R + +P +Q + IP+ L G+ ++ + +GK A++ PI+ L +
Sbjct: 17 CEKMR----WYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQALLEAGPNL 72
Query: 115 QRSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISIL 174
S FA VL P+R+L ++ E L +F + ++ + + ++ + ++
Sbjct: 73 NTS---FACVLSPSRDLVFRIAEYFQVLGSQFG-VKCATLVEANDIIDQTNQILQQPHLI 128
Query: 175 IATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQE 234
+ T ++ HL+ T F L++++ EAD +L F + Q
Sbjct: 129 VGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFE-----------------EQQL 171
Query: 235 NAVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPD 294
N + ++R+ L S+T+ EKV+ + ++SL NP+ I + K
Sbjct: 172 NDILSIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSK----------------- 214
Query: 295 EDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFS 354
Y V +Q+ +P + L+ IL + R K VF
Sbjct: 215 ----------------YSTVVTQLQQSCFMPAMLKDCYLVYILTEMTGR----KSTVFTQ 254
Query: 355 TCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENS 414
TC + +LK+ F + P I M Q + + AFK+
Sbjct: 255 TCGSAFLLALILKNLDFRAIPII-----------------SYMSQAKKLGALNAFKSGKF 297
Query: 415 ALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDY 474
+LL ++ + RGLD P V +I Y+ P + +Y+HRVG T G ++ F+ P E
Sbjct: 298 NILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWT---GHVNAAISFVNPYEAGQ 354
Query: 475 LQDLEKH-GVSLTEYP 489
L+ +E+H G L YP
Sbjct: 355 LEMIERHTGKKLPVYP 370
>Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382212-29375908 | 20130731
Length = 417
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 184/436 (42%), Gaps = 84/436 (19%)
Query: 56 CDQLRDRLGFEAPTLVQAQAIPVILSGRHALVNAATG-TGKTIAYLAPIIHYLQSYDNRI 114
C+++R + +P +Q + IP+ L G+ ++ + +GK A++ PI+ L +
Sbjct: 17 CEKMR----WYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQALLEAGPNL 72
Query: 115 QRSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISIL 174
S FA VL P+R+L ++ E L +F + ++ + + ++ + ++
Sbjct: 73 NTS---FACVLSPSRDLVFRIAEYFQVLGSQFG-VKCATLVEANDIIDQTNQILQQPHLI 128
Query: 175 IATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQE 234
+ T ++ HL+ T F L++++ EAD +L F + Q
Sbjct: 129 VGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFE-----------------EQQL 171
Query: 235 NAVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPD 294
N + ++R+ L S+T+ EKV+ + ++SL NP+ I + K
Sbjct: 172 NDILSIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSK----------------- 214
Query: 295 EDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFS 354
Y V +Q+ +P + L+ IL + R K VF
Sbjct: 215 ----------------YSTVVTQLQQSCFMPAMLKDCYLVYILTEMTGR----KSTVFTQ 254
Query: 355 TCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENS 414
TC + +LK+ F + P I M Q + + AFK+
Sbjct: 255 TCGSAFLLALILKNLDFRAIPII-----------------SYMSQAKKLGALNAFKSGKF 297
Query: 415 ALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDY 474
+LL ++ + RGLD P V +I Y+ P + +Y+HRVG T G ++ F+ P E
Sbjct: 298 NILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWT---GHVNAAISFVNPYEAGQ 354
Query: 475 LQDLEKH-GVSLTEYP 489
L+ +E+H G L YP
Sbjct: 355 LEMIERHTGKKLPVYP 370
>Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 184/436 (42%), Gaps = 84/436 (19%)
Query: 56 CDQLRDRLGFEAPTLVQAQAIPVILSGRHALVNAATG-TGKTIAYLAPIIHYLQSYDNRI 114
C+++R + +P +Q + IP+ L G+ ++ + +GK A++ PI+ L +
Sbjct: 17 CEKMR----WYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQALLEAGPNL 72
Query: 115 QRSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISIL 174
S FA VL P+R+L ++ E L +F + ++ + + ++ + ++
Sbjct: 73 NTS---FACVLSPSRDLVFRIAEYFQVLGSQFG-VKCATLVEANDIIDQTNQILQQPHLI 128
Query: 175 IATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQE 234
+ T ++ HL+ T F L++++ EAD +L F + Q
Sbjct: 129 VGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFE-----------------EQQL 171
Query: 235 NAVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPD 294
N + ++R+ L S+T+ EKV+ + ++SL NP+ I + K
Sbjct: 172 NDILSIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSK----------------- 214
Query: 295 EDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFS 354
Y V +Q+ +P + L+ IL + R K VF
Sbjct: 215 ----------------YSTVVTQLQQSCFMPAMLKDCYLVYILTEMTGR----KSTVFTQ 254
Query: 355 TCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENS 414
TC + +LK+ F + P I M Q + + AFK+
Sbjct: 255 TCGSAFLLALILKNLDFRAIPII-----------------SYMSQAKKLGALNAFKSGKF 297
Query: 415 ALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDY 474
+LL ++ + RGLD P V +I Y+ P + +Y+HRVG T G ++ F+ P E
Sbjct: 298 NILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWT---GHVNAAISFVNPYEAGQ 354
Query: 475 LQDLEKH-GVSLTEYP 489
L+ +E+H G L YP
Sbjct: 355 LEMIERHTGKKLPVYP 370
>Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 184/436 (42%), Gaps = 84/436 (19%)
Query: 56 CDQLRDRLGFEAPTLVQAQAIPVILSGRHALVNAATG-TGKTIAYLAPIIHYLQSYDNRI 114
C+++R + +P +Q + IP+ L G+ ++ + +GK A++ PI+ L +
Sbjct: 21 CEKMR----WYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQALLEAGPNL 76
Query: 115 QRSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISIL 174
S FA VL P+R+L ++ E L +F + ++ + + ++ + ++
Sbjct: 77 NTS---FACVLSPSRDLVFRIAEYFQVLGSQFG-VKCATLVEANDIIDQTNQILQQPHLI 132
Query: 175 IATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQE 234
+ T ++ HL+ T F L++++ EAD +L F + Q
Sbjct: 133 VGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFE-----------------EQQL 175
Query: 235 NAVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPD 294
N + ++R+ L S+T+ EKV+ + ++SL NP+ I + K
Sbjct: 176 NDILSIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSK----------------- 218
Query: 295 EDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFS 354
Y V +Q+ +P + L+ IL + R K VF
Sbjct: 219 ----------------YSTVVTQLQQSCFMPAMLKDCYLVYILTEMTGR----KSTVFTQ 258
Query: 355 TCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENS 414
TC + +LK+ F + P I M Q + + AFK+
Sbjct: 259 TCGSAFLLALILKNLDFRAIPII-----------------SYMSQAKKLGALNAFKSGKF 301
Query: 415 ALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDY 474
+LL ++ + RGLD P V +I Y+ P + +Y+HRVG T G ++ F+ P E
Sbjct: 302 NILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWT---GHVNAAISFVNPYEAGQ 358
Query: 475 LQDLEKH-GVSLTEYP 489
L+ +E+H G L YP
Sbjct: 359 LEMIERHTGKKLPVYP 374
>Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 184/436 (42%), Gaps = 84/436 (19%)
Query: 56 CDQLRDRLGFEAPTLVQAQAIPVILSGRHALVNAATG-TGKTIAYLAPIIHYLQSYDNRI 114
C+++R + +P +Q + IP+ L G+ ++ + +GK A++ PI+ L +
Sbjct: 21 CEKMR----WYSPLKIQTEVIPLALQGKDDVIGISPPRSGKAGAFVLPILQALLEAGPNL 76
Query: 115 QRSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISIL 174
S FA VL P+R+L ++ E L +F + ++ + + ++ + ++
Sbjct: 77 NTS---FACVLSPSRDLVFRIAEYFQVLGSQFG-VKCATLVEANDIIDQTNQILQQPHLI 132
Query: 175 IATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQE 234
+ T ++ HL+ T F L++++ EAD +L F + Q
Sbjct: 133 VGTLRQVFYHLRLTQGFSLARLKYLVIHEADLLLNDQFE-----------------EQQL 175
Query: 235 NAVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPD 294
N + ++R+ L S+T+ EKV+ + ++SL NP+ I + K
Sbjct: 176 NDILSIIPSERRTFLFSSTMTEKVHMIQRLSLRNPLKIDVSSK----------------- 218
Query: 295 EDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFS 354
Y V +Q+ +P + L+ IL + R K VF
Sbjct: 219 ----------------YSTVVTQLQQSCFMPAMLKDCYLVYILTEMTGR----KSTVFTQ 258
Query: 355 TCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENS 414
TC + +LK+ F + P I M Q + + AFK+
Sbjct: 259 TCGSAFLLALILKNLDFRAIPII-----------------SYMSQAKKLGALNAFKSGKF 301
Query: 415 ALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDY 474
+LL ++ + RGLD P V +I Y+ P + +Y+HRVG T G ++ F+ P E
Sbjct: 302 NILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWT---GHVNAAISFVNPYEAGQ 358
Query: 475 LQDLEKH-GVSLTEYP 489
L+ +E+H G L YP
Sbjct: 359 LEMIERHTGKKLPVYP 374
>Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:54963018-54968467 | 20130731
Length = 480
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 179/418 (42%), Gaps = 83/418 (19%)
Query: 57 DQLRDRL---GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNR 113
DQL R+ G+ PT VQ QA+P + SGR +++A TG+GKT+AYL I + + +
Sbjct: 90 DQLLQRMEEVGYVMPTPVQKQALPRLFSGRDCILHAQTGSGKTLAYLLLIYSIISTRKSS 149
Query: 114 IQRSDGTFALVLVPTRELCLQVYEILVKLLHRFHWI--------VPGYIMGGENRSKEKA 165
Q ALVLVPTREL +QV ++ L + + + + GG R +
Sbjct: 150 FQ------ALVLVPTRELGMQVTKVARILAAKPTGVEGEQRSCTIMALLDGGTLRRHKSW 203
Query: 166 RLRKGISILIATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGS 225
+ +I++AT L L++ F NLR ++ DE D I K + + +L S
Sbjct: 204 FKAEPPAIVVATVESLCQMLER-QLFSLGNLRVLVVDEVDFI--FNSSKQVSSLRKILTS 260
Query: 226 TRTGCDDQENAVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTT 285
+ C++++ AS Q LNE V K + + + I
Sbjct: 261 -YSSCNNRQTVFASASIPQHNQF-----LNEAVQQ--KWTKRDVIHI------------- 299
Query: 286 ASLDHAEPDEDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKH------ 339
H P E +P +L R + +L LLS+++
Sbjct: 300 ----HVSPVE----------------PMPSRLSHRFIVCDIKRKLQTLLSLIQSDAPESG 339
Query: 340 -LFEREPSQKVVVFFSTCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNME 398
+F E S+K S SL+ F +SY G IL L +M
Sbjct: 340 IIFVSEQSEK-----SKKAGNSPSTSLVIDFLKTSY----HG------SLDILLLEDDMN 384
Query: 399 QENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTAR 456
+R S + LL++TDV+ARG+DFP++ I YD P A +Y+HR GRT R
Sbjct: 385 FNSRAASLLEVRKGGGYLLVATDVAARGVDFPEMTHIYNYDLPKTAIDYLHRAGRTCR 442
>Medtr3g118120.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:55283621-55286718 | 20130731
Length = 537
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 189/421 (44%), Gaps = 80/421 (19%)
Query: 63 LGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNR---IQRSDG 119
L P+ +QA + P +++G+ ++ +G+GKT+AYL PII L+ + + S
Sbjct: 149 LSLTRPSNIQAMSFPPVIAGKSCIIADQSGSGKTLAYLVPIIQRLRQQELQGLHKSSSQS 208
Query: 120 TFALVLVPTRELCLQVYEILVKLLHRFHWIVP---GYIMGGENRSKEKARLRKGISILIA 176
L+L PT EL QV+ + +VP + GG + + L +G+ +LIA
Sbjct: 209 PTLLILAPTAELASQVFHNCRSISK--SGVVPFKSMLVTGGFRQKTQLDTLNQGVDVLIA 266
Query: 177 TPGRLLDHLKKTSSFVY-TNLRWIIFDEADRILELGFG-KDIEEILDLLGSTRTGCDDQE 234
TPGR L + + F++ TNL + DE D + FG +D E+ L L S+
Sbjct: 267 TPGRFLFLINQ--GFLHLTNLTCAVLDEVDIL----FGDEDFEKALQCLISS-------- 312
Query: 235 NAVPGASKTQRQNLLLSATLNEKV-NHLAKISLENPVMIGLDDKSIEPISTTASLDHAEP 293
S Q L ++ATL + V + L ++ + +++G I +D +
Sbjct: 313 ------SPVDTQYLFVTATLPKNVYSKLVEVFPDCEMVMGPSMHRINSRLEEIIVDCS-- 364
Query: 294 DEDSEEKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVF- 352
ED +EK + + + + L L E+ + +VF
Sbjct: 365 GEDGQEK-----------TLDTAFLNKK-------------AALLQLAEKNRVPRTIVFC 400
Query: 353 --FSTCDAVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFK 410
TC V+ + L F D++ + ++L H M QE+R S + F
Sbjct: 401 NKIETCRKVE---NALNRF-----------DRKG-IRMQVLPFHAAMTQESRLASMKEFT 445
Query: 411 ----TENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGESLLF 466
E S ++ TD ++RG+DF +V +I +D P + +EYV RVGRTAR G +G+ F
Sbjct: 446 RSPPKELSQFMVCTDRASRGIDFTRVDHVILFDYPRDPSEYVRRVGRTAR-GARGQGKAF 504
Query: 467 L 467
+
Sbjct: 505 I 505
>Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:16475815-16482952 | 20130731
Length = 462
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 88/173 (50%), Gaps = 21/173 (12%)
Query: 316 QLIQRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDFHYSLLKSFKFSSYP 375
+L Q + VPC RL L +LK S+KV+VFFST ++V FH L
Sbjct: 239 RLEQEFILVPCAKRLITLYIMLK----TTKSKKVMVFFSTTESVKFHEELFT-------- 286
Query: 376 QIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCI 435
FL K +HG+ + +F +LL T+++A GL+ P V I
Sbjct: 287 ---------FLDVKCYGVHGDQTVSEHSKIYYSFSNAEEMILLCTNIAAFGLNIPDVDLI 337
Query: 436 IQYDCPGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEKHGVSLTEY 488
+QYD P + EY+H+VGRTAR KG +LLFL P E ++ ++ H V + E+
Sbjct: 338 VQYDPPIDPEEYIHKVGRTARGTRKGNALLFLMPHELRFISFMKTHKVLIREH 390
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 60 RDRLGFEAP--TLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRS 117
R + F+A T +QA+AIP++L G ++ G+GKT+AYL P + +L N+ +
Sbjct: 30 RTLVKFQAARMTSIQAKAIPLLLRGDDLAAYSSNGSGKTLAYLIPALDHLCK--NKYEPD 87
Query: 118 DGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIAT 177
DG +VL P + +Q+ + +L + +G S +RK ++LIAT
Sbjct: 88 DGIIVMVLCPNTMVAIQIDRDIKTILKDSPQTLQT--IGRLIASPGDRYVRK--NLLIAT 143
Query: 178 PGRL-LDHLKKTSSFVYTNLRWIIFDEADRILELG 211
P L H Y L+++IFD+ IL
Sbjct: 144 PAGLRYHHAYDPERIKYDKLKFLIFDDPYLILRFS 178
>Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:27069344-27076281 | 20130731
Length = 491
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 125/460 (27%), Positives = 192/460 (41%), Gaps = 103/460 (22%)
Query: 63 LGFEAPTLVQAQAIPVILSGRH--ALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGT 120
+ FE P+ +QA+++P+IL+ H + A G+GKT + + L D +Q
Sbjct: 98 MKFEKPSKIQAKSLPMILNPPHRDLIAQAHNGSGKTTCF---NLGMLSRVDPNLQAPQ-- 152
Query: 121 FALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGI--SILIATP 178
AL + PTREL +Q E+L K + ++ I + + R R I ++I TP
Sbjct: 153 -ALCICPTRELAIQNIEVLRK-MGKYTGISSECAVPMDRRDSIPVMKRAPIMAQVVIGTP 210
Query: 179 GRLLDHLKKTSSFVYTNLRWIIFDEADRIL-ELGFGKDIEEILDLLGSTRTGCDDQENAV 237
G + +L T L+ ++FDEAD++L E GF D I+ + + C
Sbjct: 211 GT-MKNLITYKKLGVTKLKILVFDEADQMLAEDGFRDDSLRIIKEIEKFNSSC------- 262
Query: 238 PGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDS 297
Q LL SAT NE V + A T + E +E
Sbjct: 263 --------QVLLFSATFNETVKNFA----------------------TRVVGKKEHNELF 292
Query: 298 EEKYSGKIPTVGDYK--VPVQLIQRHVKVPCGSRLPVLLSILKHLFE-REPSQKVVVFFS 354
+K + V YK VP +L++ V I ++FE E + ++F
Sbjct: 293 VKKEELSLDAVKQYKVLVPDELVKIDV-------------IKNYIFELGENVGQTIIFVR 339
Query: 355 TCDAVD-FHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTEN 413
T ++ H +L+ LG ++ + G ++ +R + FK
Sbjct: 340 TRNSAKMLHKALVD------------------LGYEVTSIQGALDHVDRDKIVKEFKDGL 381
Query: 414 SALLLSTDVSARGLDFPKVRCIIQYDCP---------GEATE-----YVHRVGRTARLGE 459
+ +L+STDV ARG D +V +I YD P G E Y+HRVGR R G
Sbjct: 382 TQVLISTDVLARGFDQQQVNLVINYDLPLKYAAEYTHGHEQEPDYEVYLHRVGRAGRFGR 441
Query: 460 KGESLLFLQPIERD--YLQDLEKH-GVSLTEYPLLKVLDY 496
KG ++ L ERD L +EKH G + E V DY
Sbjct: 442 KG-AVFNLICGERDEKTLSKIEKHFGTYIKEVKDRSVEDY 480
>Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348848-14341230 | 20130731
Length = 508
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 160/353 (45%), Gaps = 86/353 (24%)
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRL 181
A+VL PTREL QV+ + + H + GG R +E++ L I +++ TPGR+
Sbjct: 13 AVVLCPTRELSEQVFRVAKAISHHARFRCTMVSGGGRLRPQEES-LSNPIDMVVGTPGRI 71
Query: 182 LDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGAS 241
L H+++ + VY ++++++ DEAD + + GFG DI++ L L AS
Sbjct: 72 LQHIEE-GNMVYGDIQYVVLDEADTMFDRGFGPDIKKFLAPLKHR-------------AS 117
Query: 242 KTQR---QNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSE 298
K Q +L++AT+ + V +L + E ++ L S+ + A D
Sbjct: 118 KPDSLGFQTVLVTATMTKAVQNL--VDEEFQGIVHLRTSSLHKKISNARHDFI------- 168
Query: 299 EKYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFEREPS----QKVVVFFS 354
K SG ++L LL +L EPS +V+VF +
Sbjct: 169 -KLSG----------------------TENKLDSLLQVL------EPSLAKGNRVMVFCN 199
Query: 355 TCD---AVDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKT 411
T + AVD H+ +EE ++ HG + R + FK+
Sbjct: 200 TLNSSRAVD-HF-------------LEENQ------ISTVNYHGEVPAAQRVENLNKFKS 239
Query: 412 ENS--ALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARLGEKGE 462
N L+ TD++ARGLD V +I +D P + +Y+HR GRTAR+G KG+
Sbjct: 240 NNDDCPTLVCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGK 291
>Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC |
scaffold0915:3555-1057 | 20130731
Length = 282
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GFE P+ +Q ++IP+ L+G L A GTGKT A+ P + + +N IQ +
Sbjct: 7 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFSIPALEKIDQDNNIIQ------VV 60
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLD 183
+LVPTREL LQ ++ K L + I GG + + RL + + +L+ TPGR+LD
Sbjct: 61 ILVPTRELALQTSQV-CKELGKHLQIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 119
Query: 184 HLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPGASKT 243
L K V + ++ DEAD++L F IE+++ L T
Sbjct: 120 -LAKKGVCVLKDCSMLVMDEADKLLSPEFQPSIEQLIQFLPPT----------------- 161
Query: 244 QRQNLLLSATLNEKVNHLAKISLENPVMIGLDDK 277
RQ L+ SAT V L P +I L D+
Sbjct: 162 -RQILMFSATFPVTVKDFNDRYLRKPYIINLMDE 194
>Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:17617607-17621556 | 20130731
Length = 450
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 184/450 (40%), Gaps = 99/450 (22%)
Query: 63 LGFEAPTLVQAQAIPVILSGRHA--LVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGT 120
+GF P+ +Q +P+IL+ H + A G+GKT + ++ L D ++
Sbjct: 73 MGFIKPSKIQEITLPMILNPPHKDLIAQARNGSGKTTCF---VLGMLSRVDPNMKAPQ-- 127
Query: 121 FALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGR 180
AL + PTREL +Q E+L K+ ++ I + ++ R ++I TPG
Sbjct: 128 -ALCICPTRELAIQNNEVLQKM-GKYTGISSELAIPSMDKIPPSRRPPIMAQVVIGTPGT 185
Query: 181 LLDHLKKTSSFVYTNLRWIIFDEADRIL-ELGFGKDIEEILDLLGSTRTGCDDQENAVPG 239
+ + LK T L+ ++FDEAD++L ++ KD L
Sbjct: 186 I-NSLKNHKKLGVTRLKILVFDEADQMLAQMMVTKDWLVFL------------------- 225
Query: 240 ASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIEPISTTASLDHAEPDEDSEE 299
Q LL SAT ++ V + A A +H E EE
Sbjct: 226 ------QVLLFSATFDDTVKNFA-------------------TRIVAKKEHNEYFVKKEE 260
Query: 300 KYSGKIPTVGDYKVPVQLIQRHVKVPCGSRLPVLLSILKHLFE-REPSQKVVVFFSTCDA 358
+ ++ ++++ KV C L + I ++FE E + ++F T ++
Sbjct: 261 -------------LSLEAVKQY-KVKCTDELAKIEVIKDYIFELGENVGQTIIFVRTRNS 306
Query: 359 VDFHYSLLKSFKFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLL 418
+ L F G ++ + G ++ E R T + FK + +L+
Sbjct: 307 AKMLHKSLVDF-----------------GYEVTSIQGALQTEERDTIIKEFKDGLTQVLI 349
Query: 419 STDVSARGLDFPKVRCIIQYDCP-----GEATE-----YVHRVGRTARLGEKGESL-LFL 467
STDV +RG D +V +I YD P G+ E Y+HRVGR R G KG L
Sbjct: 350 STDVLSRGFDQDQVNLVINYDLPLKYTRGQEPEPDCEVYLHRVGRAGRFGRKGAVFNLIC 409
Query: 468 QPIERDYLQDLEKH-GVSLTEYPLLKVLDY 496
E+ + +E+H G+ + E V DY
Sbjct: 410 HESEQMVMSKIEEHFGIHVEEVREKSVGDY 439
>Medtr4g077370.1 | DEAD-box helicase family protein | LC |
chr4:29630577-29632466 | 20130731
Length = 446
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 41/211 (19%)
Query: 61 DRLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGT 120
D+LG ++P VQ IP +L GRH + TG+GKT A+ PI+ L + G
Sbjct: 265 DKLGMQSPRPVQRHCIPKVLEGRHVIGIDKTGSGKTAAFALPILQRLG------ETPFGV 318
Query: 121 FALVLVPTRELCLQVYEILVKLLHRFHWI-------VPGYIMGGENRSKEKARLRKGISI 173
FALVL PTREL +Q L H+F WI + ++GG ++ + +L ++
Sbjct: 319 FALVLTPTRELAVQ-------LAHQF-WILGSSLRLILTVVVGGLDKRIQAKQLVARPNL 370
Query: 174 LIATPGRLLDHLKKTSSF--VYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCD 231
+IATP RL L+ ++ ++++ DEAD++L++GF ++++ I L
Sbjct: 371 VIATPERLKILLQDNPEIAPIFAATKFLVLDEADQLLDVGFQEELKVIFQCL-------- 422
Query: 232 DQENAVPGASKTQRQNLLLSATLNEKVNHLA 262
EN RQNL SAT+ + +
Sbjct: 423 -PEN---------RQNLFFSATMTSNLQKMC 443
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 28/170 (16%)
Query: 62 RLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTF 121
+LG + P VQ IP +L GR + TG+GKT A+ PI+ L + F
Sbjct: 18 KLGMQTPRRVQQHCIPKVLEGRDVVGIDETGSGKTAAFALPILQRLAEHPKPFGVY--VF 75
Query: 122 ALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGR- 180
ALVL PTREL +Q+ + + L + L ++IATP R
Sbjct: 76 ALVLTPTRELAIQLADQFLAL--------------------GSSLLPTSPHLVIATPERL 115
Query: 181 ---LLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTR 227
LLD+ + + F T ++++ DEAD++L++GF ++ I+ L R
Sbjct: 116 RVLLLDNPEIATIFATT--KFLVLDEADQLLDVGFRDELNVIVQCLPENR 163
>Medtr8g032230.1 | DEAD-box helicase family protein | HC |
chr8:12119817-12118310 | 20130731
Length = 171
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 74/140 (52%), Gaps = 6/140 (4%)
Query: 61 DRLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGT 120
+++G++ P +Q +AIP L G+ + + TG+GKT A+ PI+H L G
Sbjct: 25 EKMGWKNPKEIQLKAIPQALQGKDVIGFSQTGSGKTGAFALPILHALLDAPRH-----GF 79
Query: 121 FALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGR 180
FA V+ PTREL QV E L + ++G + ++ + KG I + TPGR
Sbjct: 80 FACVISPTRELAYQVPEQFEALGSEIG-VKCAVLVGQMDMVQQSIEIAKGPDIFVGTPGR 138
Query: 181 LLDHLKKTSSFVYTNLRWII 200
+LDHLK T F L++++
Sbjct: 139 VLDHLKNTKGFSLDRLKYLV 158
>Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:40632868-40627375 | 20130731
Length = 619
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%)
Query: 385 FLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDCPGEA 444
F ++ +H ++ QE R + F+ + +L++TDV ARG+DF + C+I YD P A
Sbjct: 394 FDNIRVDVIHSDLSQEERENAVDNFRAGKTWVLIATDVVARGMDFKGINCVINYDFPDSA 453
Query: 445 TEYVHRVGRTARLGEKGESLLFLQPIERDYLQDL 478
+ Y+HR+GR+ R G GE++ F + +L+++
Sbjct: 454 SAYIHRIGRSGRAGRSGEAITFYTEEDIPFLRNV 487
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 63 LGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFA 122
LGF PT +Q QAIPV+L R A TG+GKT+A++ P++ L+++ G A
Sbjct: 151 LGFREPTPIQRQAIPVLLQDRECFACAPTGSGKTLAFVCPMLMKLKAH-----AKGGVRA 205
Query: 123 LVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLL 182
+++ +REL Q Y KL + + + +N + + ILI+TP RL
Sbjct: 206 VIICHSRELSGQTYRECKKLAKGEKFRIK---LMTKNLLRNADFSKFSCDILISTPLRLC 262
Query: 183 DHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEIL 220
+KK + + +++ DE+D++ E K I+ I+
Sbjct: 263 LAIKK-KKVDLSRVEYLVLDESDKLFEPQLFKQIDSII 299
>Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:17536994-17532829 | 20130731
Length = 413
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 83/162 (51%), Gaps = 8/162 (4%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GFE P+ +Q + I + G + A +GTGKT + + I+ L Q AL
Sbjct: 59 GFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQLDYSVTECQ------AL 112
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLD 183
VL PTREL Q+ E +++ L + + +GG + +++ L G+ +++ TPGR+ D
Sbjct: 113 VLAPTRELAQQI-EKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFD 171
Query: 184 HLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGS 225
L++ S ++ + DEAD +L GF I +I LL S
Sbjct: 172 MLRR-QSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPS 212
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 394 HGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGR 453
HG+M+Q R + F++ +S +L++TD+ ARG+D +V +I YD P + Y+HR+GR
Sbjct: 310 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGR 369
Query: 454 TARLGEKGESLLFLQPIERDYLQDLEK-HGVSLTEYP 489
+ R G KG ++ F+ + L D++K + V + E P
Sbjct: 370 SGRFGRKGVAINFVTTDDERMLSDIQKFYNVLIEELP 406
>Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 413
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GFE P+ +Q + I + G + A +GTGKT + + I+ L + Q AL
Sbjct: 59 GFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQ------AL 112
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLD 183
VL PTREL Q+ E +++ L + + +GG + +++ L+ G+ +++ TPGR+ D
Sbjct: 113 VLAPTRELAQQI-EKVMRALGDYLGVKVHACVGGTSVREDQRILQTGVHVVVGTPGRVFD 171
Query: 184 HLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLL 223
L++ S ++ + DEAD +L GF I +I LL
Sbjct: 172 MLRR-QSLRSDCIKMFVLDEADEMLSRGFKDQIYDIFQLL 210
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 394 HGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGR 453
HG+M+Q R + F++ +S +L++TD+ ARG+D +V +I YD P + Y+HR+GR
Sbjct: 310 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGR 369
Query: 454 TARLGEKGESLLFLQPIERDYLQDLEK-HGVSLTEYP 489
+ R G KG ++ F+ + L D++K + V + E P
Sbjct: 370 SGRFGRKGVAINFVTLEDARMLADIQKFYNVIVEELP 406
>Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 397
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GFE P+ +Q + I + G + A +GTGKT + + I+ L + Q AL
Sbjct: 43 GFEKPSAIQQRGIVPFIKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQ------AL 96
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLD 183
VL PTREL Q+ E +++ L + + +GG + +++ L+ G+ +++ TPGR+ D
Sbjct: 97 VLAPTRELAQQI-EKVMRALGDYLGVKVHACVGGTSVREDQRILQTGVHVVVGTPGRVFD 155
Query: 184 HLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLL 223
L++ S ++ + DEAD +L GF I +I LL
Sbjct: 156 MLRR-QSLRSDCIKMFVLDEADEMLSRGFKDQIYDIFQLL 194
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 394 HGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGR 453
HG+M+Q R + F++ +S +L++TD+ ARG+D +V +I YD P + Y+HR+GR
Sbjct: 294 HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGR 353
Query: 454 TARLGEKGESLLFLQPIERDYLQDLEK-HGVSLTEYP 489
+ R G KG ++ F+ + L D++K + V + E P
Sbjct: 354 SGRFGRKGVAINFVTLEDARMLADIQKFYNVIVEELP 390
>Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:26237354-26229767 | 20130731
Length = 594
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 63 LGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSY---------DNR 113
+ P+LVQA +IP +LSG+ ++ A TG+GKT +YL P+I L+ D
Sbjct: 108 IALNTPSLVQASSIPSVLSGKDVVIAAETGSGKTYSYLLPLIDKLRGTEEYSLDVVSDKE 167
Query: 114 IQRSDGTFALVLVPTRELCLQVYEILVKLL-HRFHWIVPGYIMGGENRSKEKARLRKGIS 172
I LVL P +LC QV + L IV + G K+ +R+
Sbjct: 168 ISPPARKVLLVLCPNVQLCEQVVRMANSLCGDNDETIVSAAAICG----KQGWPIREP-D 222
Query: 173 ILIATPGRLLDHL----KKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLL 223
I++ TP LL+H+ ++ F++ +++++FDEAD +L F + +++LL
Sbjct: 223 IIVTTPAALLNHVDVDRRRRMEFMH-GVKYVVFDEADMLLCGSFQNKVIRLINLL 276
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 24/152 (15%)
Query: 316 QLIQRHVKVPCGSRLPVLLSILKHLFEREP------SQKVVVFFSTCDAVDFHYSLLKSF 369
+L QR ++V +++ L+ + H + E + +VF +T +AV+ +L
Sbjct: 399 RLKQRWIEVTVDTQVKELIRAVNHSLKLEDLDIGSGIHRTMVFANTVEAVEAVVKILG-- 456
Query: 370 KFSSYPQIEEGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDF 429
+ G + L H N + R + F + +L+ TD +ARG+D
Sbjct: 457 ---------------YAGLECLRYHKNCTLDERAQTLVDFY-DKGGVLVCTDAAARGVDI 500
Query: 430 PKVRCIIQYDCPGEATEYVHRVGRTARLGEKG 461
P V +IQ D A +++HR+GRTAR G+ G
Sbjct: 501 PNVSHVIQADFATSAVDFLHRIGRTARAGQIG 532
>Medtr0279s0040.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | scaffold0279:22822-23172 | 20130731
Length = 116
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 21/114 (18%)
Query: 319 QRHVKVPCGSRLPVLLSILKHLFEREPSQKVVVFFSTCDAVDFHYSLLKSFKFSSYPQIE 378
Q +V VPC R VL S LK R S+KV+VFFS+C++V FH +
Sbjct: 10 QGYVFVPCAKRFMVLYSFLK----RHKSKKVMVFFSSCNSVKFHADIFN----------- 54
Query: 379 EGDKQMFLGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKV 432
+ L C ++G +Q+ R T+F F +LL TDV+ARGLD P V
Sbjct: 55 ----HIHLHCS--SIYGKQKQQTRTTTFVDFCQAEKGILLCTDVAARGLDIPSV 102
>Medtr3g107420.4 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561636 | 20130731
Length = 314
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 35/216 (16%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GFE P+ VQ + IP + G + A +G GKT ++ + + ++ AL
Sbjct: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVS------AL 118
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVP----GYIMGGENRSKEKARLRKGI-SILIATP 178
VL TREL Q+ RF +P GG N K L+ I++ TP
Sbjct: 119 VLCHTRELAYQI----CHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPQIVVGTP 174
Query: 179 GRLLDHLKKTSSFVYTNLRWIIFDEADRILE-LGFGKDIEEILDLLGSTRTGCDDQENAV 237
GR+L L + + N+R + DE D++LE L KD+++I L
Sbjct: 175 GRIL-ALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKL--------------- 218
Query: 238 PGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIG 273
+ +Q ++ SATL++++ + K +++ + G
Sbjct: 219 ---TPHDKQVMMFSATLSKEIRPVCKKFMQDVISHG 251
>Medtr3g107420.3 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49558567 | 20130731
Length = 314
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 35/216 (16%)
Query: 64 GFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFAL 123
GFE P+ VQ + IP + G + A +G GKT ++ + + ++ AL
Sbjct: 65 GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVS------AL 118
Query: 124 VLVPTRELCLQVYEILVKLLHRFHWIVP----GYIMGGENRSKEKARLRKGI-SILIATP 178
VL TREL Q+ RF +P GG N K L+ I++ TP
Sbjct: 119 VLCHTRELAYQI----CHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPQIVVGTP 174
Query: 179 GRLLDHLKKTSSFVYTNLRWIIFDEADRILE-LGFGKDIEEILDLLGSTRTGCDDQENAV 237
GR+L L + + N+R + DE D++LE L KD+++I L
Sbjct: 175 GRIL-ALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKL--------------- 218
Query: 238 PGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIG 273
+ +Q ++ SATL++++ + K +++ + G
Sbjct: 219 ---TPHDKQVMMFSATLSKEIRPVCKKFMQDVISHG 251
>Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:7041752-7035027 | 20130731
Length = 462
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 92/225 (40%), Gaps = 54/225 (24%)
Query: 62 RLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQ------SYDNRIQ 115
+L + P +QAQ IP+ L G+ + +GKT A++ PI L Y +
Sbjct: 20 QLDWYDPLKIQAQVIPLALEGKDVYAISPPRSGKTGAFVLPIFQALNFAFEIARYFEALG 79
Query: 116 RSDGTFALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILI 175
+ G VLV T ++ Q K+L + H I++
Sbjct: 80 QHFGVKFAVLVSTSDMEYQTN----KILQQPH-------------------------IIV 110
Query: 176 ATPGRLLDHLKKTSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQEN 235
ATPG+L+ HLK T +F L++++ DEA LL S D Q
Sbjct: 111 ATPGKLVKHLKDTPAFSLRKLKYLVLDEA----------------HLLESNYKHIDRQLE 154
Query: 236 AVPGASKTQRQNLLLSATLNEKVNHLAKISLENPVMIGLDDKSIE 280
+ G R L S + +KV+ + + L NPV I D+SIE
Sbjct: 155 FILGKIPRNRTTFLFSDSKTDKVDMIQSVFLRNPVKI---DESIE 196
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 397 MEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTAR 456
+ Q R + AFK+ N +LL D+++RGLD P V +I YD P + +Y+H VG+ A
Sbjct: 221 VSQAKRLEALNAFKSGNCKILLCNDLASRGLDIPAVDTVINYDIPDDPRDYMHHVGQAA- 279
Query: 457 LGEKGESLLFLQPIERDYLQDLEKH 481
G ++ F+ P E + + +E H
Sbjct: 280 --PTGVAISFVSPNEARWFEMIETH 302
>Medtr1g009617.1 | DEAD-box ATP-dependent RNA helicase-like protein
| LC | chr1:1383737-1377649 | 20130731
Length = 400
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 386 LGCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDCPGEAT 445
LG + + + M Q + S AFK+ +LL +D ++GLD P V +I Y+ P
Sbjct: 167 LGFRAIPIMRYMSQAKKLRSLNAFKSGEYNILLCSDFLSKGLDIPAVDMVINYNIPRYPK 226
Query: 446 EYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEKH-GVSLTEYP 489
+Y++RVG TA ++ F+ P ER + +EKH G L YP
Sbjct: 227 DYIYRVGWTA--AHVNVAISFVSPDERRHFNMIEKHIGKKLPLYP 269
>Medtr6g040070.1 | DEAD/DEAH-box helicase | HC |
chr6:14397151-14388452 | 20130731
Length = 784
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 85/167 (50%), Gaps = 12/167 (7%)
Query: 58 QLRDRLGFEAPTLVQAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRS 117
++ + +G P+ +Q IP IL G+ L+++ + +T+AYL P+I L+ D + S
Sbjct: 590 EVMEEIGEFVPSEIQCVVIPTILDGKSLLLSSPSQHDRTLAYLLPLIQMLRR-DRELLGS 648
Query: 118 DGTF--ALVLVPTRELCLQVYEILVKLLHRFHWIVPGYIMGGENR-SKEKARLRKGISIL 174
+ + A+VL + E Q + ++H + +NR S + + I ++
Sbjct: 649 NSKYPRAVVLCASEEKVEQCFNAARYIIHN------AEVKSAKNRASSDTEKSNSSIGLM 702
Query: 175 IATPGRLLDHLKKTSSFVYTNLRWIIFDEADRIL-ELGFGKDIEEIL 220
I TP +L ++++ + V L+ ++ DEAD +L FG +I +I+
Sbjct: 703 IGTPYEILQYIEE-GTIVPAELKCLVLDEADSMLGSSNFGPEINKII 748
>Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6241938-6240697 | 20130731
Length = 325
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 390 ILHLHGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVH 449
+L +H +M+Q R + F++ + +L++TD GLD +V +I YD P Y+H
Sbjct: 217 VLTIHDDMDQNTRDIIVRNFQSGSPQILITTDPLVYGLDVQEVSLVINYDLPTLPENYLH 276
Query: 450 RVGRTARLGEKGESLLFLQPIERDYLQDLEK-HGVSLTEYP 489
R+ R G KG ++ F+ + L D++K V + E P
Sbjct: 277 RICHKGRFGRKGVAINFVTLDDFRMLSDIQKLSNVIIEELP 317
>Medtr1g023070.1 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 177
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 387 GCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATE 446
G + + + M Q + S A K+ +LL +D ++GLD P V +I Y+ P +
Sbjct: 27 GFRAIPIISYMSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPND 86
Query: 447 YVHRVGRTARLGEKGESLLFLQPIERDYLQDLEKH-GVSLTEYP 489
Y++RVG T + ++ F+ P ER + +EKH G L YP
Sbjct: 87 YIYRVGWT--VAHVNVAISFVSPDERRHFNIIEKHIGKKLPLYP 128
>Medtr1g023070.3 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 177
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 387 GCKILHLHGNMEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATE 446
G + + + M Q + S A K+ +LL +D ++GLD P V +I Y+ P +
Sbjct: 27 GFRAIPIISYMSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPND 86
Query: 447 YVHRVGRTARLGEKGESLLFLQPIERDYLQDLEKH-GVSLTEYP 489
Y++RVG T + ++ F+ P ER + +EKH G L YP
Sbjct: 87 YIYRVGWT--VAHVNVAISFVSPDERRHFNIIEKHIGKKLPLYP 128
>Medtr1g023070.2 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 206
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 397 MEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTAR 456
M Q + S A K+ +LL +D ++GLD P V +I Y+ P +Y++RVG T
Sbjct: 37 MSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWT-- 94
Query: 457 LGEKGESLLFLQPIERDYLQDLEKH-GVSLTEYP 489
+ ++ F+ P ER + +EKH G L YP
Sbjct: 95 VAHVNVAISFVSPDERRHFNIIEKHIGKKLPLYP 128
>Medtr1g023070.4 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 206
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Query: 397 MEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATEYVHRVGRTAR 456
M Q + S A K+ +LL +D ++GLD P V +I Y+ P +Y++RVG T
Sbjct: 37 MSQAKKLGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWT-- 94
Query: 457 LGEKGESLLFLQPIERDYLQDLEKH-GVSLTEYP 489
+ ++ F+ P ER + +EKH G L YP
Sbjct: 95 VAHVNVAISFVSPDERRHFNIIEKHIGKKLPLYP 128
>Medtr8g079452.1 | helicase family carboxy-terminal domain protein |
HC | chr8:34005644-34004777 | 20130731
Length = 113
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 384 MFLGCKILHLHGNMEQENRRT---SFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDC 440
M+ C L N+ +N R+ + F+ +LLS+D R +D VR +I YD
Sbjct: 1 MYAKCTCLDYIQNLFPKNFRSWSKTLNEFRKGVFQVLLSSDALTRVMDVEGVRNVINYDV 60
Query: 441 PGEATEYVHRVGRTARLGEKGESLLFLQPIERDYLQDLEKHGVSLTEYPLL 491
P YVHR GRTAR + G + E + + E + T YPL+
Sbjct: 61 PKFIKTYVHRAGRTARAVQTGRCFTLMSEDEANDYCNFEWGSLIGTWYPLI 111
>Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC |
scaffold0427:505-2043 | 20130731
Length = 227
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 54/117 (46%), Gaps = 18/117 (15%)
Query: 397 MEQENRRTSFQAFKTENSALLLSTDVSARGLDFPKVRCIIQYDCPGEATE---------- 446
+E E R + FK ++ +L+S DV ARG D +V +I YD P T
Sbjct: 99 LEHEERDKMVKEFKDGSTGVLISNDVLARGFDQDQVNLVINYDLPLNYTAEITCGGKPEL 158
Query: 447 ----YVHRVGRTARLGEKGESLLFLQPIERD--YLQDLEKH-GVSLTEYPLLKVLDY 496
Y HRVGR R G KG ++ L ERD + +E H G +TE V DY
Sbjct: 159 DCEVYFHRVGRAGRFGRKG-AVFNLICDERDEKLMSKIENHFGNHVTEVRQKCVEDY 214
>Medtr2g461560.1 | DEAD-box ATP-dependent RNA helicase, putative |
HC | chr2:25426629-25443935 | 20130731
Length = 1196
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 16/172 (9%)
Query: 72 QAQAIPVILSGRHALVNAATGTGKTIAYLAPIIHYLQSYDNRIQRSDGTFALVLVPTREL 131
QA++I L G++ +V T +GK++ Y P++ L ++ + AL + PT+ L
Sbjct: 459 QAESIQASLLGKNVVVATMTSSGKSLCYNLPVLEEL-------FKNSSSCALYIFPTKAL 511
Query: 132 CLQVYEILVKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRL----LDHLKK 187
L+ + F + I G+ E+ARLR +LI P L L H +
Sbjct: 512 AQDQLRSLLHMTKEFDVDLNIGIYDGDTSHSERARLRDNSRLLITNPDMLHITILPH-HR 570
Query: 188 TSSFVYTNLRWIIFDEADRILELGFGKDIEEILDLLGSTRTGCDDQENAVPG 239
+ +NLR+++ DE + FG IL L + C AVP
Sbjct: 571 LFRRILSNLRFLVIDET-HTYKGAFGSHTALILRRL---KRLCSHVYGAVPS 618