Miyakogusa Predicted Gene

Lj6g3v1164010.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1164010.1 Non Characterized Hit- tr|K3YVW8|K3YVW8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si018093,54.67,0.0000000000008,DUF304,Bacterial PH domain;
seg,NULL,CUFF.59174.1
         (242 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g043370.1 | transmembrane protein, putative | HC | chr2:18...   348   4e-96
Medtr7g076600.1 | transmembrane protein, putative | HC | chr7:28...   149   2e-36
Medtr1g047620.1 | transmembrane protein, putative | HC | chr1:17...   108   4e-24

>Medtr2g043370.1 | transmembrane protein, putative | HC |
           chr2:18891888-18895590 | 20130731
          Length = 250

 Score =  348 bits (892), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 169/224 (75%), Positives = 190/224 (84%), Gaps = 9/224 (4%)

Query: 28  YAASFREMEESFVKYQTMQWVVNSVLLILAWGIGVFMLLYLPIRRFVLRKDIRSRTLYLT 87
           YAASF+EME++F+KYQT+QW++ S+LLILAWGIG+ MLLY+P+RRF+LRKDIRSR+LYLT
Sbjct: 27  YAASFQEMEKNFIKYQTVQWILYSLLLILAWGIGLLMLLYVPVRRFILRKDIRSRSLYLT 86

Query: 88  PNAIVYKVTRPVPFPCFGVLKKEKHXXXXXXXXXXXEQGYLQSLFGVYSLRIENIGVRRP 147
            NAIVYKVTRPVPFPC GVL KEKH           EQGYLQSLFGVYSLRIEN+GVRRP
Sbjct: 87  SNAIVYKVTRPVPFPCLGVLHKEKHVLLHSVADVVVEQGYLQSLFGVYSLRIENVGVRRP 146

Query: 148 PSDDVKILGIANPNAFRK---------AVMMRLSNMRNEIVSRQVSTLEDAPHLMMSPSK 198
           PSD+VKILGIANPNAF +         AVMM+LSNMRNEIVSRQVSTLED  HLMMSPSK
Sbjct: 147 PSDNVKILGIANPNAFSRRYLIVPDQIAVMMQLSNMRNEIVSRQVSTLEDGSHLMMSPSK 206

Query: 199 SARHDSTPTGELLLLQKLEEVGSSVKRIQTLFEEQHSQTTESID 242
           S R+DST + +LLLLQKLEEVGSSVKRIQTLFE Q S TTE+ID
Sbjct: 207 SLRYDSTHSEDLLLLQKLEEVGSSVKRIQTLFEAQQSPTTETID 250


>Medtr7g076600.1 | transmembrane protein, putative | HC |
           chr7:28855988-28859368 | 20130731
          Length = 276

 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 81/232 (34%), Positives = 131/232 (56%), Gaps = 23/232 (9%)

Query: 26  VLYAASFREMEESFVKYQTMQWVVNSVLLILAWGIGVFMLLYLPIRRFVLRKDIRSRTLY 85
           ++Y+ SF E+  S +KY T+ W+  S+LL+LAWG G+ MLLYLP RR+VLRKD+ SR LY
Sbjct: 39  IVYSTSFEELASSSIKYDTVIWLSISLLLVLAWGFGLLMLLYLPFRRYVLRKDLSSRRLY 98

Query: 86  LTPNAIVYKVTRPVPFPCFGVLKKEKHXXXXXXXXXXXEQGYLQSLFGVYSLRIENIGVR 145
           +T   +VY+V+RP   P +G +  E+            EQG LQS++GV++ R+E+I   
Sbjct: 99  VTHTEVVYEVSRPSYIPFWGTITIERRLPLSLVIDIIIEQGCLQSIYGVHTFRVESIAHG 158

Query: 146 RPPS-DDVKILGIANPNAFRKAVMMRLSNMRNEIVSR--------------QVSTLEDAP 190
           +  + D ++  GI++P+  RK ++   S +  ++                 ++  + + P
Sbjct: 159 KAAAIDQLQAQGISDPDLLRKVIITEASKISRDLGKSWNPMAPSIDVENMARMPAITEGP 218

Query: 191 HLMMSPSKSARHDSTP--------TGELLLLQKLEEVGSSVKRIQTLFEEQH 234
            ++ SPS+S +   +P         G  L+L KLEEV  SVKR++ L  + H
Sbjct: 219 VVLRSPSRSHKMIGSPHSSSVERRIGGGLILNKLEEVNKSVKRLELLIAKSH 270


>Medtr1g047620.1 | transmembrane protein, putative | HC |
           chr1:17996250-17997160 | 20130731
          Length = 179

 Score =  108 bits (270), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 89/154 (57%), Gaps = 17/154 (11%)

Query: 26  VLYAASFREMEESFVKYQTMQWVVNSVLLILAWGIGVFMLLYLPIRRFVLRKDIRSRTLY 85
           ++Y+ SF E+  S +KY T+ W+  S+LL+LAWG G+ MLLYLP RR+VLRKD+ SR LY
Sbjct: 39  IVYSTSFEELASSSIKYDTVIWLSISLLLVLAWGFGLLMLLYLPFRRYVLRKDLSSRRLY 98

Query: 86  LTPNAIVYKVTRPVPFPCFGVLKKEKHXXXXXXXXXXXEQGYLQSLFGVYSLRIENIGVR 145
           +T   +VY++     +  +                     G LQS++GV++ R+E+I   
Sbjct: 99  ITHTEVVYEIIVHGSYDVY----------------YDFFSGCLQSIYGVHTFRVESIAHG 142

Query: 146 RPPS-DDVKILGIANPNAFRKAVMMRLSNMRNEI 178
           +  + D ++  GI++P+  RK ++   S +  ++
Sbjct: 143 KAAAIDQLQAQGISDPDLLRKVIITEASKISRDL 176