Miyakogusa Predicted Gene

Lj6g3v1137460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1137460.1 tr|D6MKJ9|D6MKJ9_9ASPA Transcription factor
OS=Lycoris longituba PE=2 SV=1,41.67,0.00000000000001,seg,NULL; no
description,Tify; tify,Tify; CCT_2,CO/COL/TOC1, conserved site;
TIFY,Tify,CUFF.59132.1
         (201 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g044910.1 | divergent CCT motif protein | HC | chr2:195298...   248   2e-66
Medtr2g044910.3 | divergent CCT motif protein | HC | chr2:195306...   221   2e-58
Medtr2g044910.2 | divergent CCT motif protein | HC | chr2:195298...   142   2e-34
Medtr4g124360.1 | divergent CCT motif protein | HC | chr4:514339...   133   1e-31
Medtr4g124360.2 | divergent CCT motif protein | HC | chr4:514339...   120   9e-28
Medtr5g013515.1 | jasmonate zim-domain protein | HC | chr5:43008...    60   1e-09

>Medtr2g044910.1 | divergent CCT motif protein | HC |
           chr2:19529873-19533009 | 20130731
          Length = 207

 Score =  248 bits (633), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 135/213 (63%), Positives = 156/213 (73%), Gaps = 18/213 (8%)

Query: 1   MDGVTVKLEPEQQVSALESSPHGDSVDGVATN------------KSVAASGLNAVIPNTS 48
           MDGVTVK EPEQ  + LESSP   +VDG ++N            KS+ ASG+N VI NT+
Sbjct: 1   MDGVTVKFEPEQ-FTVLESSPI--AVDGASSNMVEGSMMNSSANKSMPASGMNPVIANTT 57

Query: 49  KVTIFYNGSVHIYDGIPADKVHEIMLIAAAAAKSVETKKIGMQXXXXXXXXXXXXXXHGT 108
           ++TIFYNGS+ IYDGIPA+KV EIM IAAAAAKS ETKKI  Q              HGT
Sbjct: 58  QLTIFYNGSICIYDGIPAEKVQEIMRIAAAAAKSSETKKIVKQSPAPSPVPTRPSSPHGT 117

Query: 109 TNNIASTQELCFPAKKSSICRLQEFPIARRHSLQSFLEQRRNRLGSKAPYSSSSTTKAAV 168
            +NIAS+Q L FPA KSSICR+QEFPIARRHSLQ FL++RR+RLGSKAPY SS  TK  V
Sbjct: 118 ADNIASSQALPFPA-KSSICRMQEFPIARRHSLQMFLQKRRDRLGSKAPYPSSPKTK--V 174

Query: 169 ADNIENNFSADNAPDLVSSKRPEEKFQPTISAS 201
           ADN+ENNF ADN+PD VS K P+E+FQPTISAS
Sbjct: 175 ADNMENNFGADNSPDSVSMKEPKEEFQPTISAS 207


>Medtr2g044910.3 | divergent CCT motif protein | HC |
           chr2:19530634-19533009 | 20130731
          Length = 164

 Score =  221 bits (564), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 113/167 (67%), Positives = 130/167 (77%), Gaps = 3/167 (1%)

Query: 35  VAASGLNAVIPNTSKVTIFYNGSVHIYDGIPADKVHEIMLIAAAAAKSVETKKIGMQXXX 94
           + ASG+N VI NT+++TIFYNGS+ IYDGIPA+KV EIM IAAAAAKS ETKKI  Q   
Sbjct: 1   MPASGMNPVIANTTQLTIFYNGSICIYDGIPAEKVQEIMRIAAAAAKSSETKKIVKQSPA 60

Query: 95  XXXXXXXXXXXHGTTNNIASTQELCFPAKKSSICRLQEFPIARRHSLQSFLEQRRNRLGS 154
                      HGT +NIAS+Q L FPA KSSICR+QEFPIARRHSLQ FL++RR+RLGS
Sbjct: 61  PSPVPTRPSSPHGTADNIASSQALPFPA-KSSICRMQEFPIARRHSLQMFLQKRRDRLGS 119

Query: 155 KAPYSSSSTTKAAVADNIENNFSADNAPDLVSSKRPEEKFQPTISAS 201
           KAPY SS  TK  VADN+ENNF ADN+PD VS K P+E+FQPTISAS
Sbjct: 120 KAPYPSSPKTK--VADNMENNFGADNSPDSVSMKEPKEEFQPTISAS 164


>Medtr2g044910.2 | divergent CCT motif protein | HC |
           chr2:19529873-19533009 | 20130731
          Length = 164

 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/149 (57%), Positives = 99/149 (66%), Gaps = 18/149 (12%)

Query: 1   MDGVTVKLEPEQQVSALESSPHGDSVDGVATN------------KSVAASGLNAVIPNTS 48
           MDGVTVK EPEQ  + LESSP   +VDG ++N            KS+ ASG+N VI NT+
Sbjct: 1   MDGVTVKFEPEQ-FTVLESSPI--AVDGASSNMVEGSMMNSSANKSMPASGMNPVIANTT 57

Query: 49  KVTIFYNGSVHIYDGIPADKVHEIMLIAAAAAKSVETKKIGMQXXXXXXXXXXXXXXHGT 108
           ++TIFYNGS+ IYDGIPA+KV EIM IAAAAAKS ETKKI  Q              HGT
Sbjct: 58  QLTIFYNGSICIYDGIPAEKVQEIMRIAAAAAKSSETKKIVKQSPAPSPVPTRPSSPHGT 117

Query: 109 TNNIASTQELCFPAKKSSICRLQ--EFPI 135
            +NIAS+Q L FPA KSSICR+Q   FPI
Sbjct: 118 ADNIASSQALPFPA-KSSICRMQGVNFPI 145


>Medtr4g124360.1 | divergent CCT motif protein | HC |
           chr4:51433963-51431129 | 20130731
          Length = 178

 Score =  133 bits (334), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/149 (51%), Positives = 100/149 (67%), Gaps = 6/149 (4%)

Query: 30  ATNKSVAASGLNAVIPNTSKVTIFYNGSVHIYDGIPADKVHEIMLIAAAAAKSVETKKIG 89
           A N  ++ SGLNA+ P T++  I YNGS+ +YDGIPA+KVHEIM++A+A AKS E K  G
Sbjct: 26  AANWPLSTSGLNAMTPGTTQFAILYNGSMCVYDGIPAEKVHEIMMMASANAKSSEMKS-G 84

Query: 90  MQXXXXXXXXXXXXXXHGTTNNIASTQELCFP-AKKSSICRLQEFPIARRHSLQSFLEQR 148
           +                G ++N+ S   + FP A+KSSICR+QEFP+ARR SLQ FLE+R
Sbjct: 85  IP-FNSLFSSTTPSSPQGNSDNLPSPPSVGFPAAEKSSICRMQEFPLARRQSLQRFLEKR 143

Query: 149 RNRLGSKAPYSSSSTTKAAVADNIENNFS 177
           R R+ SKAPY+SSS+  A  +D   NNFS
Sbjct: 144 RIRVRSKAPYTSSSSKAANNSD---NNFS 169


>Medtr4g124360.2 | divergent CCT motif protein | HC |
           chr4:51433963-51431183 | 20130731
          Length = 140

 Score =  120 bits (301), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 69/136 (50%), Positives = 91/136 (66%), Gaps = 6/136 (4%)

Query: 43  VIPNTSKVTIFYNGSVHIYDGIPADKVHEIMLIAAAAAKSVETKKIGMQXXXXXXXXXXX 102
           + P T++  I YNGS+ +YDGIPA+KVHEIM++A+A AKS E K  G+            
Sbjct: 1   MTPGTTQFAILYNGSMCVYDGIPAEKVHEIMMMASANAKSSEMKS-GI-PFNSLFSSTTP 58

Query: 103 XXXHGTTNNIASTQELCFPA-KKSSICRLQEFPIARRHSLQSFLEQRRNRLGSKAPYSSS 161
               G ++N+ S   + FPA +KSSICR+QEFP+ARR SLQ FLE+RR R+ SKAPY+SS
Sbjct: 59  SSPQGNSDNLPSPPSVGFPAAEKSSICRMQEFPLARRQSLQRFLEKRRIRVRSKAPYTSS 118

Query: 162 STTKAAVADNIENNFS 177
           S+  A  +D   NNFS
Sbjct: 119 SSKAANNSD---NNFS 131


>Medtr5g013515.1 | jasmonate zim-domain protein | HC |
           chr5:4300830-4301739 | 20130731
          Length = 140

 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 10/120 (8%)

Query: 45  PNTSKVTIFYNGSVHIYDGIPADKVHEIMLIAAAAAKSVETKKIGMQXXXXXXXXXXXXX 104
           P  +++TIFY+G + ++D IPA+KV +IM+ ++    +    K                 
Sbjct: 10  PKCTQMTIFYDGKIIVFDDIPAEKVEDIMVFSSEGTTTSRNHKNNNYAFRFAQSHPSFLA 69

Query: 105 XHGTTNNIASTQELCFPAKKSSICRLQEFPIARRHSLQSFLEQRRNRLGSKAPYSSSSTT 164
            +   N   S Q    P        + + P+ R+ SL  FLE+R++R+ +KAPY +S+ T
Sbjct: 70  RNSANN---SVQVPSSPV-------IYDLPMTRKASLHRFLEKRKDRIAAKAPYQTSNPT 119