Miyakogusa Predicted Gene

Lj6g3v1126340.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1126340.1 Non Characterized Hit- tr|F6HE29|F6HE29_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,40.16,1e-16,
,CUFF.59125.1
         (151 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g046100.1 | nucleic acid-binding protein, putative | HC | ...   228   2e-60

>Medtr2g046100.1 | nucleic acid-binding protein, putative | HC |
           chr2:20200445-20197758 | 20130731
          Length = 145

 Score =  228 bits (580), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 106/126 (84%), Positives = 117/126 (92%)

Query: 26  HSHDQLKITSFSEIVNDVSLHFQIIRFPKQIYVWIGYNSTKLGHMYAAAPTRPNNVVSVT 85
           +   QL+ T F+E+VNDV+LHFQIIRFPKQIYVWIGYNS KLG +YAAA TRPNNVVSVT
Sbjct: 20  NEQTQLQFTCFTELVNDVNLHFQIIRFPKQIYVWIGYNSAKLGQLYAAASTRPNNVVSVT 79

Query: 86  SLLGGTSDNTGSGIARRLVLKTGLNIVMACSIPKNSPMIEIEAEKILIQKLISLGYTKSR 145
           S+LGG SDNTGSGIARRLVLKTGLNI+MAC+IPKNSPM+EIEAEKILIQKLISLGYTKSR
Sbjct: 80  SILGGNSDNTGSGIARRLVLKTGLNIIMACNIPKNSPMVEIEAEKILIQKLISLGYTKSR 139

Query: 146 VEGTSL 151
           +EGTSL
Sbjct: 140 LEGTSL 145