Miyakogusa Predicted Gene

Lj6g3v1116110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1116110.1 Non Characterized Hit- tr|G7I447|G7I447_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,60.66,0.00000000002,seg,NULL,CUFF.59112.1
         (132 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g047120.1 | hypothetical protein | HC | chr2:20670424-2067...    58   2e-09

>Medtr2g047120.1 | hypothetical protein | HC |
           chr2:20670424-20671101 | 20130731
          Length = 225

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)

Query: 46  QEXXXXXXALIGAGDTSANQWASILSMSNPSLSLTLFVPQDA-AATAILDPTLF 98
           QE      ALIG+GDTS N+W SILS+S+PSLSLTLF+PQ    +++ L+P  F
Sbjct: 48  QEMNNILDALIGSGDTSINKWVSILSISHPSLSLTLFIPQQPLPSSSTLNPFTF 101