Miyakogusa Predicted Gene

Lj6g3v1105060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1105060.1 Non Characterized Hit- tr|D7U731|D7U731_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,59.4,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; MMR_HSR1,GTP
binding domain; no descripti,CUFF.59135.1
         (238 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g061470.1 | P-loop nucleoside triphosphate hydrolase super...   339   1e-93
Medtr7g091320.1 | P-loop nucleoside triphosphate hydrolase super...   152   3e-37
Medtr7g091320.3 | P-loop nucleoside triphosphate hydrolase super...   152   3e-37
Medtr7g091320.2 | P-loop nucleoside triphosphate hydrolase super...   152   4e-37
Medtr7g094890.1 | ribosome biogenesis GTPase A | HC | chr7:37900...    82   3e-16
Medtr1g048030.1 | guanine nucleotide-binding-like protein | HC |...    55   5e-08
Medtr4g081850.1 | nucleolar GTP-binding-like protein | HC | chr4...    54   2e-07
Medtr2g079510.1 | nucleolar GTP-binding-like protein | HC | chr2...    52   4e-07

>Medtr2g061470.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr2:26052534-26057259 |
           20130731
          Length = 375

 Score =  339 bits (869), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 168/242 (69%), Positives = 191/242 (78%), Gaps = 11/242 (4%)

Query: 3   AASHLGRRIGTALKEMIGSKKRAP-----WHDSLMAAASTAIVERIPLVDIIVHVRDARI 57
           A +  GRR+G  +KE I  +K +      W+D  M A++ AI ERIPLVD+IVHV DARI
Sbjct: 2   ATTQFGRRVGRIVKERIERRKSSVIREGLWNDPFMVASTRAIAERIPLVDLIVHVTDARI 61

Query: 58  PSSSECHLLKNCPSSSKQIIALNKSDLACSSGLQAWTEYFAENNCISCGVNAHNKESIRK 117
           P SS+CHLL     +   II LNK+DLA  S LQ W +YF E NC+SCGV+AHNKESIR+
Sbjct: 62  PFSSQCHLL-----THNHIIVLNKADLASRSSLQVWMDYFRETNCVSCGVDAHNKESIRQ 116

Query: 118 FLTLIQGQVRKLGRTDHAN-YTATVMLIGIPNVGKSALVNALHQVGRISAAEKGKLKHAT 176
           FL+LIQ QV KL RTD AN YTATVMLIG+PNVGKSAL NALH VGRISAAEKGKLKHAT
Sbjct: 117 FLSLIQRQVGKLRRTDQANKYTATVMLIGLPNVGKSALTNALHHVGRISAAEKGKLKHAT 176

Query: 177 VSPEPGETKDIRSFKIGSHPNIYVLDTPAVLSPEVPDVDVISKLILTGAIGDCFVGIKEI 236
           VSPEPGETKDIRS+KI SHPNIYVLDTPAVL PEVPDVDV+SKL+LTGAIGDC +  KE 
Sbjct: 177 VSPEPGETKDIRSYKIASHPNIYVLDTPAVLPPEVPDVDVLSKLLLTGAIGDCLIERKET 236

Query: 237 AQ 238
           A+
Sbjct: 237 AE 238


>Medtr7g091320.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr7:36058142-36064108 |
           20130731
          Length = 373

 Score =  152 bits (384), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/214 (42%), Positives = 132/214 (61%), Gaps = 7/214 (3%)

Query: 27  WHDSLMAAASTAIVERIPLVDIIVHVRDARIPSSSECHLLKNCPSSSKQIIALNKSDLAC 86
           W    MAAA+ AI  R+ L D+++ VRDARIP SS    L+   S  ++++ALNK DLA 
Sbjct: 26  WFPGHMAAATRAIRNRLKLADLVIEVRDARIPISSINSDLQPHLSLKRRVVALNKKDLAN 85

Query: 87  SSGLQAWTEYFA--ENNCISCGVNAHNKESIRKFLTLIQGQVRKLGRTDHANYTATVMLI 144
            + +  W  YF   + +CI   +NAH+K S+ K L L++ ++++    +    T  VM++
Sbjct: 86  PNIMHKWVNYFESCKQDCIP--INAHSKSSVTKLLELVELKLKEAISKEP---TLLVMVV 140

Query: 145 GIPNVGKSALVNALHQVGRISAAEKGKLKHATVSPEPGETKDIRSFKIGSHPNIYVLDTP 204
           G+PNVGKS L+N++HQ+       + K+K A V P PG T+DI  FKI + P+IYVLDTP
Sbjct: 141 GVPNVGKSCLINSIHQIAHSRFPVQEKMKRAAVGPLPGVTQDIAGFKIANKPSIYVLDTP 200

Query: 205 AVLSPEVPDVDVISKLILTGAIGDCFVGIKEIAQ 238
            VL P + D++   KL L G++ D  VG + IAQ
Sbjct: 201 GVLVPSISDIETGLKLALAGSVKDSVVGEERIAQ 234


>Medtr7g091320.3 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr7:36058214-36064108 |
           20130731
          Length = 373

 Score =  152 bits (384), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/214 (42%), Positives = 132/214 (61%), Gaps = 7/214 (3%)

Query: 27  WHDSLMAAASTAIVERIPLVDIIVHVRDARIPSSSECHLLKNCPSSSKQIIALNKSDLAC 86
           W    MAAA+ AI  R+ L D+++ VRDARIP SS    L+   S  ++++ALNK DLA 
Sbjct: 26  WFPGHMAAATRAIRNRLKLADLVIEVRDARIPISSINSDLQPHLSLKRRVVALNKKDLAN 85

Query: 87  SSGLQAWTEYFA--ENNCISCGVNAHNKESIRKFLTLIQGQVRKLGRTDHANYTATVMLI 144
            + +  W  YF   + +CI   +NAH+K S+ K L L++ ++++    +    T  VM++
Sbjct: 86  PNIMHKWVNYFESCKQDCIP--INAHSKSSVTKLLELVELKLKEAISKEP---TLLVMVV 140

Query: 145 GIPNVGKSALVNALHQVGRISAAEKGKLKHATVSPEPGETKDIRSFKIGSHPNIYVLDTP 204
           G+PNVGKS L+N++HQ+       + K+K A V P PG T+DI  FKI + P+IYVLDTP
Sbjct: 141 GVPNVGKSCLINSIHQIAHSRFPVQEKMKRAAVGPLPGVTQDIAGFKIANKPSIYVLDTP 200

Query: 205 AVLSPEVPDVDVISKLILTGAIGDCFVGIKEIAQ 238
            VL P + D++   KL L G++ D  VG + IAQ
Sbjct: 201 GVLVPSISDIETGLKLALAGSVKDSVVGEERIAQ 234


>Medtr7g091320.2 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr7:36058204-36063524 |
           20130731
          Length = 299

 Score =  152 bits (383), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/214 (42%), Positives = 132/214 (61%), Gaps = 7/214 (3%)

Query: 27  WHDSLMAAASTAIVERIPLVDIIVHVRDARIPSSSECHLLKNCPSSSKQIIALNKSDLAC 86
           W    MAAA+ AI  R+ L D+++ VRDARIP SS    L+   S  ++++ALNK DLA 
Sbjct: 26  WFPGHMAAATRAIRNRLKLADLVIEVRDARIPISSINSDLQPHLSLKRRVVALNKKDLAN 85

Query: 87  SSGLQAWTEYFA--ENNCISCGVNAHNKESIRKFLTLIQGQVRKLGRTDHANYTATVMLI 144
            + +  W  YF   + +CI   +NAH+K S+ K L L++ ++++    +    T  VM++
Sbjct: 86  PNIMHKWVNYFESCKQDCIP--INAHSKSSVTKLLELVELKLKEAISKEP---TLLVMVV 140

Query: 145 GIPNVGKSALVNALHQVGRISAAEKGKLKHATVSPEPGETKDIRSFKIGSHPNIYVLDTP 204
           G+PNVGKS L+N++HQ+       + K+K A V P PG T+DI  FKI + P+IYVLDTP
Sbjct: 141 GVPNVGKSCLINSIHQIAHSRFPVQEKMKRAAVGPLPGVTQDIAGFKIANKPSIYVLDTP 200

Query: 205 AVLSPEVPDVDVISKLILTGAIGDCFVGIKEIAQ 238
            VL P + D++   KL L G++ D  VG + IAQ
Sbjct: 201 GVLVPSISDIETGLKLALAGSVKDSVVGEERIAQ 234


>Medtr7g094890.1 | ribosome biogenesis GTPase A | HC |
           chr7:37900080-37894545 | 20130731
          Length = 373

 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 25/219 (11%)

Query: 27  WHDSLMAAASTAIVERIPLVDIIVHVRDARIPSSSECHLLKNCPSSSKQIIALNKSDLAC 86
           W    +A A   + E++ L+D+++ VRD RIP S+    +     + K+I+ LN+ D+  
Sbjct: 99  WFPGHIAKAEKELKEQLKLMDVVIEVRDGRIPLSTSHPQMDLWLGNKKRILVLNREDMIS 158

Query: 87  SSGLQAWTEYFAENNCISCGVNAHNKESIRKFLTLIQGQVRKLGRTDHANYTATVML--- 143
           ++   AW EYF  +       N        K   L     ++L    +    A  +L   
Sbjct: 159 TADRNAWAEYFTRHGTKVVFSNGQLGMGTLKLCRL----AKELAADVNVKRRAKGLLPRP 214

Query: 144 -----IGIPNVGKSALVNALHQVGRISAAEKGKLKHATVSPEPGETKDIRSFKIGSHPNI 198
                +G PNVGKS+L+N L            K +    +P PG T+D+R  + G   ++
Sbjct: 215 VRAGIVGYPNVGKSSLINRLL-----------KRRMCPAAPRPGVTRDLRWVRFGK--DL 261

Query: 199 YVLDTPAVLSPEVPDVDVISKLILTGAIGDCFVGIKEIA 237
            +LD+P +L   + D     KL +   IG+    + ++A
Sbjct: 262 ELLDSPGILPMRISDQSAAIKLAICDDIGERSYDVADVA 300


>Medtr1g048030.1 | guanine nucleotide-binding-like protein | HC |
           chr1:18178595-18172713 | 20130731
          Length = 599

 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 37/184 (20%)

Query: 47  DIIVHVRDARIPSSSEC----HLLKNCPSSSKQIIALNKSDLACSSGLQAWTEYFAENN- 101
           D+I+ V DAR P  + C      +++  +  + ++ LNK DL     ++ W +Y  E   
Sbjct: 144 DVILEVLDARDPLGTRCVNIEKRVRDSGTYKRHVLLLNKIDLVPRESVEKWLKYLREEFP 203

Query: 102 --CISCGV-----NAHNKESIRKFLTL----------IQGQVRKLGRTDHANYTATVMLI 144
                C       N    + I+   TL          +   ++   R+D    + TV L+
Sbjct: 204 TVAFKCSTQQQKSNLGRSKKIKTSNTLQLSDCLGAETLLKLLKNYARSDKLKTSITVGLV 263

Query: 145 GIPNVGKSALVNALHQVGRISAAEKGKLKHAT-VSPEPGETKDIRSFKIGSHPNIYVLDT 203
           G+PNVGKS+L+N+L +             HA  VS   G T+  +  ++    N+ +LD 
Sbjct: 264 GLPNVGKSSLINSLMR------------SHAVHVSASAGSTRSKQEIRLDK--NVKLLDC 309

Query: 204 PAVL 207
           P V+
Sbjct: 310 PGVV 313


>Medtr4g081850.1 | nucleolar GTP-binding-like protein | HC |
           chr4:31881653-31883769 | 20130731
          Length = 563

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 24/167 (14%)

Query: 47  DIIVHVRDARIPSSSEC-----HLLKNCPSSSKQIIALNKSDLACSSGLQAWTEYFAENN 101
           D++V V DAR P  + C     HL +NC      ++ LNK DL  +   + W    ++  
Sbjct: 207 DVVVQVIDARDPQGTRCYHLEKHLKENC-KHKHMVLLLNKCDLIPAWATKGWLRVLSKEY 265

Query: 102 CISCGVNAHNKESIRKFLTLIQGQVRKLGRTDHANYTATVMLIGIPNVGKSALVNALHQV 161
                  + NK   +  L  I   +R+  R        +V  +G PNVGKS+++N L   
Sbjct: 266 PTLAFHASINKSFGKGSLLSI---LRQFARLKSDKQAISVGFVGYPNVGKSSVINTL--- 319

Query: 162 GRISAAEKGKLKHA-TVSPEPGETKDIRSFKIGSHPNIYVLDTPAVL 207
                    + K+   V+P PGETK  +   +     I+++D P V+
Sbjct: 320 ---------RTKNVCKVAPIPGETKVWQYITLTKR--IFLIDCPGVV 355


>Medtr2g079510.1 | nucleolar GTP-binding-like protein | HC |
           chr2:33482137-33476593 | 20130731
          Length = 574

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 24/167 (14%)

Query: 47  DIIVHVRDARIPSSSEC-----HLLKNCPSSSKQIIALNKSDLACSSGLQAWTEYFAENN 101
           D++V V DAR P  + C     HL +NC      ++ LNK DL  +   + W    ++  
Sbjct: 215 DVVVQVIDARDPQGTRCYHLEKHLKENC-KHKHMVLLLNKCDLIPAWATKGWLRVLSKEY 273

Query: 102 CISCGVNAHNKESIRKFLTLIQGQVRKLGRTDHANYTATVMLIGIPNVGKSALVNALHQV 161
                  + NK   +  L  +   +R+  R        +V  +G PNVGKS+++N L   
Sbjct: 274 PTLAFHASINKSFGKGSLLSV---LRQFARLKSDKQAISVGFVGYPNVGKSSVINTL--- 327

Query: 162 GRISAAEKGKLKHA-TVSPEPGETKDIRSFKIGSHPNIYVLDTPAVL 207
                    + K+   V+P PGETK  +   +     I+++D P V+
Sbjct: 328 ---------RTKNVCKVAPIPGETKVWQYITLTKR--IFLIDCPGVV 363