Miyakogusa Predicted Gene

Lj6g3v1094760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1094760.1 Non Characterized Hit- tr|I1MY66|I1MY66_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,88.89,0.0000000002,PYRUVATE DEHYDROGENASE E1 COMPONENT, BETA
SUBUNIT,NULL; DEHYDROGENASE RELATED,NULL; no
description,N,CUFF.59096.1
         (120 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g026290.3 | scythe protein ubiquitin-like domain protein |...    70   6e-13
Medtr1g026290.1 | scythe protein ubiquitin-like domain protein |...    70   6e-13
Medtr1g026290.4 | scythe protein ubiquitin-like domain protein |...    69   7e-13
Medtr1g026290.5 | scythe protein ubiquitin-like domain protein |...    69   7e-13
Medtr1g026290.2 | scythe protein ubiquitin-like domain protein |...    69   7e-13
Medtr7g005380.2 | pyruvate dehydrogenase E1 beta subunit | HC | ...    65   1e-11
Medtr7g005380.1 | pyruvate dehydrogenase E1 beta subunit | HC | ...    65   1e-11
Medtr4g116370.2 | scythe protein ubiquitin-like domain protein |...    54   4e-08
Medtr4g116370.5 | scythe protein ubiquitin-like domain protein |...    53   5e-08
Medtr4g116370.1 | scythe protein ubiquitin-like domain protein |...    53   6e-08
Medtr4g116370.3 | scythe protein ubiquitin-like domain protein |...    53   6e-08
Medtr4g116370.4 | scythe protein ubiquitin-like domain protein |...    53   6e-08

>Medtr1g026290.3 | scythe protein ubiquitin-like domain protein | HC
           | chr1:8524541-8515221 | 20130731
          Length = 762

 Score = 69.7 bits (169), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 32/36 (88%), Positives = 33/36 (91%)

Query: 34  RTMLTLRMGQSYAVSVVNVGPAIYISPSGPNPIMVQ 69
           RTMLTLRMGQS A SVVN GPA+YISPSGPNPIMVQ
Sbjct: 131 RTMLTLRMGQSSAESVVNAGPAVYISPSGPNPIMVQ 166


>Medtr1g026290.1 | scythe protein ubiquitin-like domain protein | HC
           | chr1:8526183-8515221 | 20130731
          Length = 983

 Score = 69.7 bits (169), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 32/36 (88%), Positives = 33/36 (91%)

Query: 34  RTMLTLRMGQSYAVSVVNVGPAIYISPSGPNPIMVQ 69
           RTMLTLRMGQS A SVVN GPA+YISPSGPNPIMVQ
Sbjct: 352 RTMLTLRMGQSSAESVVNAGPAVYISPSGPNPIMVQ 387


>Medtr1g026290.4 | scythe protein ubiquitin-like domain protein | HC
           | chr1:8526023-8515221 | 20130731
          Length = 987

 Score = 69.3 bits (168), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 32/36 (88%), Positives = 33/36 (91%)

Query: 34  RTMLTLRMGQSYAVSVVNVGPAIYISPSGPNPIMVQ 69
           RTMLTLRMGQS A SVVN GPA+YISPSGPNPIMVQ
Sbjct: 352 RTMLTLRMGQSSAESVVNAGPAVYISPSGPNPIMVQ 387


>Medtr1g026290.5 | scythe protein ubiquitin-like domain protein | HC
           | chr1:8526023-8515221 | 20130731
          Length = 922

 Score = 69.3 bits (168), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 32/36 (88%), Positives = 33/36 (91%)

Query: 34  RTMLTLRMGQSYAVSVVNVGPAIYISPSGPNPIMVQ 69
           RTMLTLRMGQS A SVVN GPA+YISPSGPNPIMVQ
Sbjct: 352 RTMLTLRMGQSSAESVVNAGPAVYISPSGPNPIMVQ 387


>Medtr1g026290.2 | scythe protein ubiquitin-like domain protein | HC
           | chr1:8526023-8515221 | 20130731
          Length = 933

 Score = 69.3 bits (168), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 32/36 (88%), Positives = 33/36 (91%)

Query: 34  RTMLTLRMGQSYAVSVVNVGPAIYISPSGPNPIMVQ 69
           RTMLTLRMGQS A SVVN GPA+YISPSGPNPIMVQ
Sbjct: 352 RTMLTLRMGQSSAESVVNAGPAVYISPSGPNPIMVQ 387


>Medtr7g005380.2 | pyruvate dehydrogenase E1 beta subunit | HC |
           chr7:85481-92086 | 20130731
          Length = 361

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/32 (93%), Positives = 32/32 (100%)

Query: 69  QMTVREALNSALDEEMSANPKVFLMGEEVGEY 100
           QMTVR+ALNSALDEEMSA+PKVFLMGEEVGEY
Sbjct: 27  QMTVRDALNSALDEEMSADPKVFLMGEEVGEY 58


>Medtr7g005380.1 | pyruvate dehydrogenase E1 beta subunit | HC |
           chr7:86084-92086 | 20130731
          Length = 361

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/32 (93%), Positives = 32/32 (100%)

Query: 69  QMTVREALNSALDEEMSANPKVFLMGEEVGEY 100
           QMTVR+ALNSALDEEMSA+PKVFLMGEEVGEY
Sbjct: 27  QMTVRDALNSALDEEMSADPKVFLMGEEVGEY 58


>Medtr4g116370.2 | scythe protein ubiquitin-like domain protein | HC
           | chr4:48189526-48203033 | 20130731
          Length = 544

 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 31/36 (86%)

Query: 34  RTMLTLRMGQSYAVSVVNVGPAIYISPSGPNPIMVQ 69
           RT +TLR+GQ+ + +VVN GPA++ISP+GPN IMVQ
Sbjct: 181 RTTMTLRLGQTPSEAVVNGGPAVFISPTGPNHIMVQ 216


>Medtr4g116370.5 | scythe protein ubiquitin-like domain protein | HC
           | chr4:48190772-48203313 | 20130731
          Length = 714

 Score = 53.1 bits (126), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 31/36 (86%)

Query: 34  RTMLTLRMGQSYAVSVVNVGPAIYISPSGPNPIMVQ 69
           RT +TLR+GQ+ + +VVN GPA++ISP+GPN IMVQ
Sbjct: 351 RTTMTLRLGQTPSEAVVNGGPAVFISPTGPNHIMVQ 386


>Medtr4g116370.1 | scythe protein ubiquitin-like domain protein | HC
           | chr4:48189525-48203313 | 20130731
          Length = 626

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 31/36 (86%)

Query: 34  RTMLTLRMGQSYAVSVVNVGPAIYISPSGPNPIMVQ 69
           RT +TLR+GQ+ + +VVN GPA++ISP+GPN IMVQ
Sbjct: 263 RTTMTLRLGQTPSEAVVNGGPAVFISPTGPNHIMVQ 298


>Medtr4g116370.3 | scythe protein ubiquitin-like domain protein | HC
           | chr4:48191020-48203313 | 20130731
          Length = 722

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 31/36 (86%)

Query: 34  RTMLTLRMGQSYAVSVVNVGPAIYISPSGPNPIMVQ 69
           RT +TLR+GQ+ + +VVN GPA++ISP+GPN IMVQ
Sbjct: 359 RTTMTLRLGQTPSEAVVNGGPAVFISPTGPNHIMVQ 394


>Medtr4g116370.4 | scythe protein ubiquitin-like domain protein | HC
           | chr4:48193139-48203313 | 20130731
          Length = 700

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 23/36 (63%), Positives = 31/36 (86%)

Query: 34  RTMLTLRMGQSYAVSVVNVGPAIYISPSGPNPIMVQ 69
           RT +TLR+GQ+ + +VVN GPA++ISP+GPN IMVQ
Sbjct: 337 RTTMTLRLGQTPSEAVVNGGPAVFISPTGPNHIMVQ 372