Miyakogusa Predicted Gene

Lj6g3v1093720.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1093720.1 Non Characterized Hit- tr|I1MHU4|I1MHU4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,86.48,0,SUBFAMILY NOT
NAMED,NULL; ERO1-RELATED,Endoplasmic reticulum oxidoreductin 1;
ERO1,Endoplasmic retic,CUFF.59088.1
         (463 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g048900.1 | endoplasmic oxidoreductin protein | HC | chr2:...   757   0.0  

>Medtr2g048900.1 | endoplasmic oxidoreductin protein | HC |
           chr2:21615900-21622152 | 20130731
          Length = 464

 Score =  757 bits (1954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/448 (80%), Positives = 385/448 (85%)

Query: 16  WLWLXXXXXXXXXXXXXSSKTSSKIALFGAIDRACHCARGTPKYSGMVEDCCCDYETVDR 75
           W+W+             SS+TSSKI+LFG I +AC CA GTPKYSGMVEDCCCDYETVD 
Sbjct: 17  WVWVVIPLIAAIVAISISSRTSSKISLFGVIGKACQCAMGTPKYSGMVEDCCCDYETVDN 76

Query: 76  LNEEVLNPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPDSEFPESFKK 135
           LNEEVL PSLQELVKTPFFRYFK KLWCDCPFWPDDGMCRLRDCSVCECP++EFPESFKK
Sbjct: 77  LNEEVLYPSLQELVKTPFFRYFKAKLWCDCPFWPDDGMCRLRDCSVCECPENEFPESFKK 136

Query: 136 PKRLSLNDLVCQEGKPQAAVDRTLDSKAFRGWTEIDNPWXXXXXXXXXXMTYVNLQLNPE 195
           PKRLSLNDLVCQEGKP+AAVDRTLDSKAF GWTEIDNPW          +TYVNLQLNPE
Sbjct: 137 PKRLSLNDLVCQEGKPEAAVDRTLDSKAFTGWTEIDNPWTNDDETDNDELTYVNLQLNPE 196

Query: 196 RYTGYTGPSARRIWDAVYSENCPKYPSQESCQEEKILYKXXXXXXXXXXXXXAADYLLDE 255
           RYTGYTG SARRIWDAVYSENCPKY SQESCQEEKILYK             A+DYLLDE
Sbjct: 197 RYTGYTGTSARRIWDAVYSENCPKYLSQESCQEEKILYKLISGLHSSISVHIASDYLLDE 256

Query: 256 ATNLWGQNLSLMYDRIMKYPDRVRNLYFTYLFVLRAVTKAADYLEQAEYDTGNPNEDLKT 315
           ATN WGQNL+LMYDR+++YPDRVRNLYFT+LFVLRAVTKAADYLEQAEY+TGNPNEDLKT
Sbjct: 257 ATNTWGQNLTLMYDRVLQYPDRVRNLYFTFLFVLRAVTKAADYLEQAEYNTGNPNEDLKT 316

Query: 316 QSLIRQLLYSPKLQAACPVPFDEAKLWKGQSGPELKHKIQQQFRNISTLMDCVGCEKCRL 375
           +SLI+QLLY PKLQAACPVPFDEAKLWKGQSGPELK KIQ QFRNIS LMDCVGCEKCRL
Sbjct: 317 ESLIKQLLYKPKLQAACPVPFDEAKLWKGQSGPELKQKIQHQFRNISALMDCVGCEKCRL 376

Query: 376 WGKLQVLGLGTALKILFTVDGQENLDQTLQLQRNEVIALMNLLNRLSESVKFVHEMGPTA 435
           WGKLQVLGLGTALKILF+ DG EN+ QTLQLQRNEVIALMNLLNRLSESVKFVHEMGPTA
Sbjct: 377 WGKLQVLGLGTALKILFSDDGPENMVQTLQLQRNEVIALMNLLNRLSESVKFVHEMGPTA 436

Query: 436 ERVMEGHLSVHSKLIYSWNKFWSHVLKA 463
           ER+ EGHL  H+KLI S  K WS +L+ 
Sbjct: 437 ERITEGHLFGHTKLISSLRKIWSRILQT 464