Miyakogusa Predicted Gene

Lj6g3v1093300.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1093300.1 Non Characterized Hit- tr|F2UL24|F2UL24_SALS5
Putative uncharacterized protein OS=Salpingoeca sp.
(s,30.83,0.0000002,PRKCSH,Glucosidase II beta subunit-like;
OS-9-RELATED,NULL; Mannose 6-phosphate receptor
domain,Mann,CUFF.59074.1
         (298 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g450740.1 | glucosidase II beta subunit-like protein | HC ...   517   e-147

>Medtr2g450740.1 | glucosidase II beta subunit-like protein | HC |
           chr2:22557556-22552333 | 20130731
          Length = 298

 Score =  517 bits (1332), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 252/297 (84%), Positives = 271/297 (91%), Gaps = 4/297 (1%)

Query: 6   RALILLLI---FTHAFAEQIFPVHIASIFXXXXXXXXTSSS-REPKYKIEFHPEDSPFHP 61
           R L LL I   FT+ FAEQIFPVHI SIF         S S REPKYKIEFHPEDSPFHP
Sbjct: 2   RLLFLLFIALSFTYVFAEQIFPVHIGSIFGGSGGGGGGSGSSREPKYKIEFHPEDSPFHP 61

Query: 62  EDDQESIIMPDKNGQKFVCYLPKVEREKSGKPVIQHNVSSMIVETEKRVKQKTPDELLEV 121
           +DDQES+++PDKNGQKF+CYLPKVE+EKSGKP +QHNVSSMIVETEKRVKQKTPDELLE+
Sbjct: 62  DDDQESLVVPDKNGQKFICYLPKVEKEKSGKPPMQHNVSSMIVETEKRVKQKTPDELLEI 121

Query: 122 LKGPCFLRQEGWWSYEFCYQKRLRQLHLEDDKVVQEFVLGVYDPEATAAFNQNLSDISTL 181
           LKGPCF+RQEGWWSYEFCYQK+ RQLHLEDDKVVQEF+LGVYDPEATAAFNQNLSDIST 
Sbjct: 122 LKGPCFIRQEGWWSYEFCYQKKFRQLHLEDDKVVQEFILGVYDPEATAAFNQNLSDISTF 181

Query: 182 KDPRSKDASQRYHAHQYTNGTICDLTNKPRETEVRFVCSEPRAMISSITEISTCKYALTI 241
           KDPRSKDASQRYHAHQYTNGT+CDLTNKPRETEVRFVCSEPRAMISSITEISTCKYALT+
Sbjct: 182 KDPRSKDASQRYHAHQYTNGTVCDLTNKPRETEVRFVCSEPRAMISSITEISTCKYALTV 241

Query: 242 QCPTLCKHPLFQEERPVWHTIDCNVLPKDYKDAKGRQENRDVEIVMVTDNEINDPEQ 298
           Q PTLCKHPLFQEERPVWHTIDCNVLPKDYKD K +QE+RD++IVMVTD+EIND EQ
Sbjct: 242 QVPTLCKHPLFQEERPVWHTIDCNVLPKDYKDGKVKQEDRDMDIVMVTDSEINDSEQ 298