Miyakogusa Predicted Gene

Lj6g3v1093250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1093250.1 Non Characterized Hit- tr|I3T8K0|I3T8K0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.28,0,seg,NULL;
UBA,Ubiquitin-associated/translation elongation factor EF1B,
N-terminal, eukaryote; UBIQUI,CUFF.59065.1
         (557 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g450730.1 | NEDD8 ultimate buster-like protein | HC | chr2...   794   0.0  

>Medtr2g450730.1 | NEDD8 ultimate buster-like protein | HC |
           chr2:22550887-22542439 | 20130731
          Length = 544

 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/549 (75%), Positives = 458/549 (83%), Gaps = 16/549 (2%)

Query: 1   MAKLKIAGTWSGILEDVELEAWTIETLREEVAKRSNC-AANSINLICAGKILKDAADGTQ 59
           MAKLKIAGTWSG+LE+V+LE WTI +LREEVAKRSNC   + INLICAG+ILKD  D T 
Sbjct: 1   MAKLKIAGTWSGVLEEVDLENWTISSLREEVAKRSNCDNPHFINLICAGRILKDD-DKTL 59

Query: 60  NLAQLGLKNNSKILASRLA---DQTFIAEEERSRRLARIRTAVSSMAERHADGSLPLEDF 116
            L QLG+KNNSKILA+  +    Q+ + EE+ S RLARIR A +++AERHADGSLPLEDF
Sbjct: 60  TLTQLGIKNNSKILATVTSPQQSQSLVVEEQSSHRLARIRAAATALAERHADGSLPLEDF 119

Query: 117 NIEVEDQSGKKVRLGSETDQRAVMMGLMLHAKGKRLIRQGNYKDALEVLIMGEESFSLCD 176
           NIEVEDQSG+KVRLG+E DQRAVMMGLMLHAKGKR IR+GNYKDALEVL MGEESFS+CD
Sbjct: 120 NIEVEDQSGQKVRLGTEIDQRAVMMGLMLHAKGKRFIRKGNYKDALEVLTMGEESFSICD 179

Query: 177 PKVIELIDNVPILQIDMVWCYFMIRDIRWLSDAGKRLEMARAGIERAHGKDSLRLRILQG 236
           PKVIELIDNVPILQIDMVWCYFM+RDIRWLSDAGKRLEMARAGIERAHGKDSLRLR+LQG
Sbjct: 180 PKVIELIDNVPILQIDMVWCYFMLRDIRWLSDAGKRLEMARAGIERAHGKDSLRLRLLQG 239

Query: 237 GCYPELALHLRMELLEGVVAYHTGQLEKSRNVLASARAKFAQLQVPDEALSLVMSMGFKE 296
           G YPELALHLR+ELLEGVVA+H+GQLEKSR  LASA+AKF QLQVPDEALSLVMSMG+ +
Sbjct: 240 GRYPELALHLRLELLEGVVAFHSGQLEKSRQALASAKAKFVQLQVPDEALSLVMSMGYTQ 299

Query: 297 RGAKRALRMNNQDVGSAIDFLVAEKAKKMQKXXXXXXXXXXXXXQKSYGMTPSKKAVDID 356
           R AKRALRMNNQDVG AIDFLV EKAKKMQK             QK YG+TP KKAVD++
Sbjct: 300 RDAKRALRMNNQDVGGAIDFLVEEKAKKMQKDEEDLKRRDEIREQKQYGVTPLKKAVDLE 359

Query: 357 RLKELVSIGFEKELAAEALRRNENDTQQALDDLTNPETNSALQDNIESRKRKRQKQETDS 416
           RL ELV+IGFEKELAAEALRRNENDTQ+ALDDLTNPETNS LQ  IESRKRKRQ+Q  DS
Sbjct: 360 RLNELVTIGFEKELAAEALRRNENDTQKALDDLTNPETNSHLQVKIESRKRKRQQQAKDS 419

Query: 417 AIENVVQMGFERSRVVAAFEAGGNLEQVLQRLTALPEAGSTSENIQPQXXXXXXXXXXXX 476
           AIE VVQMGFERSRVVAAFE GGNLE+VLQRLTA P+  ST+                  
Sbjct: 420 AIEKVVQMGFERSRVVAAFEEGGNLEEVLQRLTAQPQVNSTA-----------AFDGIGS 468

Query: 477 XXXXLPDDVISDVLDQMNEVEDPSVAEERDVEMEDELSADIAKSDALDDYDIEVDIEGQA 536
               LP++V SD+ DQMNEVED +  EERDVEMEDELSADIAK DA  DYDIEV+IEG+A
Sbjct: 469 SSNPLPENVGSDIPDQMNEVEDQNKTEERDVEMEDELSADIAKGDAFTDYDIEVNIEGEA 528

Query: 537 ITEYLTLLE 545
           ITEYL+++E
Sbjct: 529 ITEYLSMVE 537