Miyakogusa Predicted Gene

Lj6g3v1088790.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1088790.2 tr|F8LDY9|F8LDY9_9CHLA FAD dependent
oxidoreductase OS=Waddlia chondrophila 2032/99 GN=WCH_BX12240
P,26.8,5e-18,seg,NULL; no description,NULL; D-AMINO ACID OXIDASE
FAMILY,NULL; FAD NAD BINDING OXIDOREDUCTASES,NUL,CUFF.59015.2
         (445 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g449830.1 | FAD-dependent oxidoreductase family protein | ...   628   e-180

>Medtr2g449830.1 | FAD-dependent oxidoreductase family protein | HC
           | chr2:21971524-21978120 | 20130731
          Length = 420

 Score =  628 bits (1620), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 315/439 (71%), Positives = 353/439 (80%), Gaps = 31/439 (7%)

Query: 5   NPMMLPYHSTSSKLHVVNAIPSSPSPVAVRSHCSLPQHPLRCAVLGAGFAGLSVVWHLLK 64
           NP +LPY   SS  H                     Q+PLR AVLGAGFAGLSVVWHLL 
Sbjct: 11  NPTILPYAPHSSLTH---------------------QYPLRFAVLGAGFAGLSVVWHLLN 49

Query: 65  HSPKELNLRIDVYDEXXXXXXXXXXXXXLLHPYSPKVKLLWEGAQCWEESLKLLRVAEEA 124
            SPKELNL I +YDE             LLHPYSPKVK LWEGAQCWEE++ L  +A++A
Sbjct: 50  QSPKELNLNIHLYDEFGIGGGASGISGGLLHPYSPKVKPLWEGAQCWEETINLFTIAQQA 109

Query: 125 SVSRNHNIGESTEDMKAFAAVRRGILRPAMDMKNMTKLSENVKTCLPNCRVETLNSEGAQ 184
           +    H+I       K F   +RGILRPAMD+KNMTKL+ N KT LP CRV+TLN++ AQ
Sbjct: 110 T---QHHI-------KPFLPHKRGILRPAMDIKNMTKLNHNAKTSLPCCRVQTLNNQAAQ 159

Query: 185 NLLPGVCLPFNSGFYMPKALNIRSQHYLQALFLACENLVKESSTLDSGQKQLNLHKRAVH 244
            LLPG+CLPF++ F+MP+ALNI  +HYL+ALFLACENLVKESS+L SG+KQL LHK+++H
Sbjct: 160 TLLPGLCLPFDTAFFMPQALNINPRHYLEALFLACENLVKESSSLYSGEKQLILHKKSIH 219

Query: 245 RLSEFEGEYDAVIVCLGAKVNMLPEISGRLPLRTCRGVIVHLELPDDMRGYPESGPSILS 304
            LSEFEGEYDAVIVCLGAKVNMLPEISGRLPLRTCRGVIVHLE PD+ R YPE GPSILS
Sbjct: 220 GLSEFEGEYDAVIVCLGAKVNMLPEISGRLPLRTCRGVIVHLEPPDNTRCYPEHGPSILS 279

Query: 305 DAWISVQGPRSLDVGSTWEWKSINSSPNVSTDEASEALLQLLPKASSIYPEIKDWVFTGA 364
           DAWISVQG RSL+VGSTWEWKSINSS NVSTDEAS+AL QLLPKAS+IYP IKDWVFTGA
Sbjct: 280 DAWISVQGSRSLNVGSTWEWKSINSSSNVSTDEASKALHQLLPKASAIYPGIKDWVFTGA 339

Query: 365 RAGLRAMPPLTPHGSLPLLGCLNDVIGRNHTCKFWLFGGLGSRGLLYHGWLGNLMAHAVL 424
           +AGLRAMPPLTPHGSLPLLGC+ND IGRNH+CK+WLFGGLGSRGLLYHGWLG+LMAHAVL
Sbjct: 340 KAGLRAMPPLTPHGSLPLLGCINDFIGRNHSCKYWLFGGLGSRGLLYHGWLGSLMAHAVL 399

Query: 425 SCNEDVIPSELTSWKNTKP 443
           SCNE+VIPSELTSWKN KP
Sbjct: 400 SCNEEVIPSELTSWKNIKP 418