Miyakogusa Predicted Gene

Lj6g3v1078470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1078470.1 Non Characterized Hit- tr|I1L2C9|I1L2C9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,69.65,0,Fip1,Pre-mRNA
polyadenylation factor Fip1; seg,NULL,CUFF.59108.1
         (1322 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g450210.1 | Fip1 [V]-like protein | HC | chr2:22147861-221...  1613   0.0  
Medtr2g450210.2 | Fip1 [V]-like protein | HC | chr2:22147861-221...  1343   0.0  
Medtr4g122070.1 | Fip1 motif protein | HC | chr4:50411541-504042...    94   8e-19

>Medtr2g450210.1 | Fip1 [V]-like protein | HC | chr2:22147861-22158767
            | 20130731
          Length = 1328

 Score = 1613 bits (4178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 873/1356 (64%), Positives = 994/1356 (73%), Gaps = 62/1356 (4%)

Query: 1    MEDDDEFGDLYTDVLRPFAISD-------HHSPQPTTTIDLNQIPSAAPH---DTPPPST 50
            M+DDDEFGDLYTDVLRPFA          H SP P ++IDLNQIP A  H   DTP    
Sbjct: 1    MDDDDEFGDLYTDVLRPFATESTPPSSVIHTSPPPPSSIDLNQIPCATSHSIHDTP---- 56

Query: 51   NQNQPGSPEIAP---ELPPRVSPQPDPVXXXXXXXXXXXXXXXXXXXI----DPMDRD-V 102
              +Q   PE AP   + P  +  +P+                     +    DPMD+D V
Sbjct: 57   --HQIDPPETAPTQDDPPVEIEKEPESADGLRVLLEPPDSKPVAVEVVVEGNDPMDQDDV 114

Query: 103  KFDIEEDDGGGAALEPVIPGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQIVLNDD 162
            KFDIEE++  G   EP+IPGLS                              LQIVLNDD
Sbjct: 115  KFDIEEENEEGGGTEPLIPGLSGGGGGGGGNDDDWDSDSDDD----------LQIVLNDD 164

Query: 163  NRMAM-----ERXXXXXXXXXXXXXXLVIVAGGDPSQGLEEQDWGNNATLAADGEGKDXX 217
            N MAM                     LVIVAG +P+QGLE+Q+WG +A +  DGE KD  
Sbjct: 165  NHMAMAMEKGGVVGDDDDEDDDEDGGLVIVAG-EPNQGLEDQEWGESANIPVDGERKDAV 223

Query: 218  XXXXXXXXXXXXXXXXXPKIGYG--GHGYHPFHSQFKYVRPGAAPIPGATTSSLGGPPGQ 275
                             PK+GYG   HGYHPFHSQFKY+RPGA  IPGA  ++ GGPPGQ
Sbjct: 224  EPGKPVAGPAAGGIPVVPKVGYGNHAHGYHPFHSQFKYIRPGATTIPGAPGAAQGGPPGQ 283

Query: 276  IRPLAIVAGRGRGEWRPPGIKGAAG------RGPGLPXXXXXXXXXXXXXXLEFTLPSHK 329
            IRPLA + GRGRG+WRPPGIKGA G       GPG P              LEFTLPSHK
Sbjct: 284  IRPLANMIGRGRGDWRPPGIKGAIGMQKGFHTGPGQPSWGNNAAGRGFGGGLEFTLPSHK 343

Query: 330  TIFEVDIENFEEKPWKYPNVDVSDFFNFGLNEDSWKDYCKQLEQLRLESTMQSKIRVYES 389
            TIF+VDIE+FEEK WKYPNVD SDFFNFGLNE++WKDYCKQLEQLRLESTMQSKIRVYES
Sbjct: 344  TIFDVDIESFEEKLWKYPNVDASDFFNFGLNEETWKDYCKQLEQLRLESTMQSKIRVYES 403

Query: 390  GRTEQEYDPDLPPELAAATGIHDVPVENASFVKSDVGQSDVMKGSGRVRLPLPTGRAIQV 449
            GRTE +YDPDLPPELAAATG+HD  VENA+ VKSDVGQSDVMKGSGR+R P+PTGRAIQV
Sbjct: 404  GRTEHDYDPDLPPELAAATGLHDGAVENANSVKSDVGQSDVMKGSGRMRPPMPTGRAIQV 463

Query: 450  EGGYGERLPSIDTRPPRIRDSDAIIEIVLQXXXXXXXXXXXXVQDQPVGGEPMKEDFRED 509
            EGGYGERLP+IDTRPPR+RDSDAIIEIVLQ            VQDQ   GEP +E FRED
Sbjct: 464  EGGYGERLPTIDTRPPRLRDSDAIIEIVLQGAEDDDSSVGIGVQDQSEDGEPQRESFRED 523

Query: 510  HVARDEIPRLQPEYFDGFPQDYDSRKKELAGRRMPFMKSSPANLPDEDEKMFFPPEEPTE 569
              A DE P L+PEY DG PQDY+ RKKE AGR+MPF  S  +N+ +EDE +F   +EP E
Sbjct: 524  VEAGDE-PSLEPEYSDGIPQDYNRRKKEHAGRKMPFATSVSSNVANEDESLFVSQDEPIE 582

Query: 570  YSGSRGQNPRSHSGNFXXXXXXXXXXXXXXXXXPISPIRKLTTDDIKKAESLESMEGRHS 629
            YSGSRGQNPRS+ GN                  PISPIRKL TDD KK +S+ESME + +
Sbjct: 583  YSGSRGQNPRSYGGNSSSSQEERKMQKTVRSQSPISPIRKLNTDDNKKEDSVESMEVKDT 642

Query: 630  RLLASPFRKDTRDSSVDDKDTELEDTGTANGSSRLEKEEMDLNAVDKVDTLEDGIEKKQK 689
             L +SP  +D + SS++DKD ELEDTGTA+GS RL K+E DLNAVDKVD L+DGI+KKQ 
Sbjct: 643  TLSSSPVIEDVKQSSLEDKDGELEDTGTADGSPRLGKKETDLNAVDKVDVLKDGIDKKQN 702

Query: 690  LTSEVEQPLLDEVDDWEDSKTARSSDNSKARSAGSRDNQKQRESLDEEVVQDPRSAQVDS 749
            LTS+VEQPLLDE DDWED K ARSSDNSKARSA SRDNQK+RE LDEEVVQDPRS ++ S
Sbjct: 703  LTSQVEQPLLDESDDWEDIKAARSSDNSKARSASSRDNQKRREGLDEEVVQDPRSTRLAS 762

Query: 750  IRQPPDENEQGFHRRERDGKQEPERNRMVLKGREGSYPYKDRHRS---SVHANTDGFDRQ 806
            IRQ PDENEQGF+R+E DGKQ+PERN MVL+GREGSYPYKDRHRS    +H NTDGFDRQ
Sbjct: 763  IRQHPDENEQGFYRKEHDGKQDPERNHMVLRGREGSYPYKDRHRSLAHQLHTNTDGFDRQ 822

Query: 807  KDRDNSDMDWAGRDDDLFSRRVRNDEPRKRDRAKVRENERNNKEDSLHSRKQLDNGSYRV 866
            KDRD+SDMDWA RDDD+++R+VR +EPRKRDRAK+RENERN+KEDS HSRKQLDNGSYR+
Sbjct: 823  KDRDSSDMDWARRDDDVYNRKVRTNEPRKRDRAKLRENERNDKEDSFHSRKQLDNGSYRI 882

Query: 867  PYDKDIGPRDSRHRERDEGLRIRYEAVDDYHGKRRRDEEYLRREHIDKEEILHGYRENAS 926
            PY+KD+G RDSRHRERDEG+R+RYEAV+DYH KRR+DEEYLRREH+DKEEI HGYRENAS
Sbjct: 883  PYEKDVGSRDSRHRERDEGVRVRYEAVEDYHIKRRKDEEYLRREHMDKEEIPHGYRENAS 942

Query: 927  XXXXXXDGLLDPRKRDELQRSRDYPDDQYAGRLKDDTWLLXXXXXXXXXXXXWHRMKQPH 986
                        R+RDE+QRSRDYPDDQY  R KDD WL+            WHR+K  H
Sbjct: 943  RRR---------RERDEVQRSRDYPDDQYTNRQKDDAWLMQERGDRQRDREEWHRLKLSH 993

Query: 987  EEHLPKREREEGRASLRSGRGSDEKAWVGHVSAKDEQKFSEKEYQGREVVRHNDQLKRRD 1046
            +  LPKREREEGR+S R+ RG++EKAWVG VSAKDE K SEK+YQ RE VRHNDQLKRRD
Sbjct: 994  DGPLPKREREEGRSSGRNVRGAEEKAWVGRVSAKDEHKLSEKDYQSRESVRHNDQLKRRD 1053

Query: 1047 RIQDESPHHKGRDDAYTRGNQYATDEKXXXXXXXXXXGDHVANASDNQRAHERKHKEGSR 1106
            RI +ES HHKGRDDAY+RGNQY  +E+           D VANASDNQR HERKHKEGSR
Sbjct: 1054 RIPEESSHHKGRDDAYSRGNQYTAEERRSRQERSSSRSDRVANASDNQRLHERKHKEGSR 1113

Query: 1107 KSKERDVSDLNSLGLAKKSQEIQSGSSNEKGLKASGNEDRAQREIPGHRMSRKHQDGMSS 1166
            KSKERD+SDLNSLGL+KKS E  +G SNEKGLK SG+++RA+ EIPGHR+SRKHQDG+SS
Sbjct: 1114 KSKERDISDLNSLGLSKKSLENPNGPSNEKGLKESGDQERAEHEIPGHRLSRKHQDGISS 1173

Query: 1167 DDEQHDSRRGRSKLERWTSHKERDFSIGKSSSSLKFKVPEKDNDDGSSEAGKPVDESVKT 1226
            DDEQ DS RGRSKLERWTSHKERDFSI K SSSLKFK  +K+N+ GSSEAGKPVDES KT
Sbjct: 1174 DDEQQDSYRGRSKLERWTSHKERDFSINKPSSSLKFKDIDKNNNGGSSEAGKPVDESAKT 1233

Query: 1227 VDVDNQHLSSAEAKESADLESRDADRKDSGDQRLDTVERLKKRSERFKLPMPSEKEAIVI 1286
            VD+DNQ     EA++S D ESRD D K+SGD+ LDTVERLKKRSERFKLPMPSEKE +VI
Sbjct: 1234 VDLDNQQPLMPEARDSVDTESRDGDSKESGDRHLDTVERLKKRSERFKLPMPSEKETLVI 1293

Query: 1287 KKLESEPLPSATQSETPVETEVKQERPARKRRWISS 1322
            KKLE+EPLPSA ++E PVE+EVKQERP RKRRWIS+
Sbjct: 1294 KKLETEPLPSA-KTENPVESEVKQERPPRKRRWISN 1328


>Medtr2g450210.2 | Fip1 [V]-like protein | HC | chr2:22147861-22158767
            | 20130731
          Length = 1152

 Score = 1343 bits (3475), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 731/1170 (62%), Positives = 832/1170 (71%), Gaps = 61/1170 (5%)

Query: 1    MEDDDEFGDLYTDVLRPFAISD-------HHSPQPTTTIDLNQIPSAAPH---DTPPPST 50
            M+DDDEFGDLYTDVLRPFA          H SP P ++IDLNQIP A  H   DTP    
Sbjct: 1    MDDDDEFGDLYTDVLRPFATESTPPSSVIHTSPPPPSSIDLNQIPCATSHSIHDTP---- 56

Query: 51   NQNQPGSPEIAP---ELPPRVSPQPDPVXXXXXXXXXXXXXXXXXXXI----DPMDRD-V 102
              +Q   PE AP   + P  +  +P+                     +    DPMD+D V
Sbjct: 57   --HQIDPPETAPTQDDPPVEIEKEPESADGLRVLLEPPDSKPVAVEVVVEGNDPMDQDDV 114

Query: 103  KFDIEEDDGGGAALEPVIPGLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQIVLNDD 162
            KFDIEE++  G   EP+IPGLS                              LQIVLNDD
Sbjct: 115  KFDIEEENEEGGGTEPLIPGLSGGGGGGGGNDDDWDSDSDDD----------LQIVLNDD 164

Query: 163  NRMAM-----ERXXXXXXXXXXXXXXLVIVAGGDPSQGLEEQDWGNNATLAADGEGKDXX 217
            N MAM                     LVIVAG +P+QGLE+Q+WG +A +  DGE KD  
Sbjct: 165  NHMAMAMEKGGVVGDDDDEDDDEDGGLVIVAG-EPNQGLEDQEWGESANIPVDGERKDAV 223

Query: 218  XXXXXXXXXXXXXXXXXPKIGYG--GHGYHPFHSQFKYVRPGAAPIPGATTSSLGGPPGQ 275
                             PK+GYG   HGYHPFHSQFKY+RPGA  IPGA  ++ GGPPGQ
Sbjct: 224  EPGKPVAGPAAGGIPVVPKVGYGNHAHGYHPFHSQFKYIRPGATTIPGAPGAAQGGPPGQ 283

Query: 276  IRPLAIVAGRGRGEWRPPGIKGAAGR------GPGLPXXXXXXXXXXXXXXLEFTLPSHK 329
            IRPLA + GRGRG+WRPPGIKGA G       GPG P              LEFTLPSHK
Sbjct: 284  IRPLANMIGRGRGDWRPPGIKGAIGMQKGFHTGPGQPSWGNNAAGRGFGGGLEFTLPSHK 343

Query: 330  TIFEVDIENFEEKPWKYPNVDVSDFFNFGLNEDSWKDYCKQLEQLRLESTMQSKIRVYES 389
            TIF+VDIE+FEEK WKYPNVD SDFFNFGLNE++WKDYCKQLEQLRLESTMQSKIRVYES
Sbjct: 344  TIFDVDIESFEEKLWKYPNVDASDFFNFGLNEETWKDYCKQLEQLRLESTMQSKIRVYES 403

Query: 390  GRTEQEYDPDLPPELAAATGIHDVPVENASFVKSDVGQSDVMKGSGRVRLPLPTGRAIQV 449
            GRTE +YDPDLPPELAAATG+HD  VENA+ VKSDVGQSDVMKGSGR+R P+PTGRAIQV
Sbjct: 404  GRTEHDYDPDLPPELAAATGLHDGAVENANSVKSDVGQSDVMKGSGRMRPPMPTGRAIQV 463

Query: 450  EGGYGERLPSIDTRPPRIRDSDAIIEIVLQXXXXXXXXXXXXVQDQPVGGEPMKEDFRED 509
            EGGYGERLP+IDTRPPR+RDSDAIIEIVLQ            VQDQ   GEP +E FRED
Sbjct: 464  EGGYGERLPTIDTRPPRLRDSDAIIEIVLQGAEDDDSSVGIGVQDQSEDGEPQRESFRED 523

Query: 510  HVARDEIPRLQPEYFDGFPQDYDSRKKELAGRRMPFMKSSPANLPDEDEKMFFPPEEPTE 569
              A DE P L+PEY DG PQDY+ RKKE AGR+MPF  S  +N+ +EDE +F   +EP E
Sbjct: 524  VEAGDE-PSLEPEYSDGIPQDYNRRKKEHAGRKMPFATSVSSNVANEDESLFVSQDEPIE 582

Query: 570  YSGSRGQNPRSHSGNFXXXXXXXXXXXXXXXXXPISPIRKLTTDDIKKAESLESMEGRHS 629
            YSGSRGQNPRS+ GN                  PISPIRKL TDD KK +S+ESME + +
Sbjct: 583  YSGSRGQNPRSYGGNSSSSQEERKMQKTVRSQSPISPIRKLNTDDNKKEDSVESMEVKDT 642

Query: 630  RLLASPFRKDTRDSSVDDKDTELEDTGTANGSSRLEKEEMDLNAVDKVDTLEDGIEKKQK 689
             L +SP  +D + SS++DKD ELEDTGTA+GS RL K+E DLNAVDKVD L+DGI+KKQ 
Sbjct: 643  TLSSSPVIEDVKQSSLEDKDGELEDTGTADGSPRLGKKETDLNAVDKVDVLKDGIDKKQN 702

Query: 690  LTSEVEQPLLDEVDDWEDSKTARSSDNSKARSAGSRDNQKQRESLDEEVVQDPRSAQVDS 749
            LTS+VEQPLLDE DDWED K ARSSDNSKARSA SRDNQK+RE LDEEVVQDPRS ++ S
Sbjct: 703  LTSQVEQPLLDESDDWEDIKAARSSDNSKARSASSRDNQKRREGLDEEVVQDPRSTRLAS 762

Query: 750  IRQPPDENEQGFHRRERDGKQEPERNRMVLKGREGSYPYKDRHRS---SVHANTDGFDRQ 806
            IRQ PDENEQGF+R+E DGKQ+PERN MVL+GREGSYPYKDRHRS    +H NTDGFDRQ
Sbjct: 763  IRQHPDENEQGFYRKEHDGKQDPERNHMVLRGREGSYPYKDRHRSLAHQLHTNTDGFDRQ 822

Query: 807  KDRDNSDMDWAGRDDDLFSRRVRNDEPRKRDRAKVRENERNNKEDSLHSRKQLDNGSYRV 866
            KDRD+SDMDWA RDDD+++R+VR +EPRKRDRAK+RENERN+KEDS HSRKQLDNGSYR+
Sbjct: 823  KDRDSSDMDWARRDDDVYNRKVRTNEPRKRDRAKLRENERNDKEDSFHSRKQLDNGSYRI 882

Query: 867  PYDKDIGPRDSRHRERDEGLRIRYEAVDDYHGKRRRDEEYLRREHIDKEEILHGYRENAS 926
            PY+KD+G RDSRHRERDEG+R+RYEAV+DYH KRR+DEEYLRREH+DKEEI HGYRENAS
Sbjct: 883  PYEKDVGSRDSRHRERDEGVRVRYEAVEDYHIKRRKDEEYLRREHMDKEEIPHGYRENAS 942

Query: 927  XXXXXXDGLLDPRKRDELQRSRDYPDDQYAGRLKDDTWLLXXXXXXXXXXXXWHRMKQPH 986
                        R+RDE+QRSRDYPDDQY  R KDD WL+            WHR+K  H
Sbjct: 943  RRR---------RERDEVQRSRDYPDDQYTNRQKDDAWLMQERGDRQRDREEWHRLKLSH 993

Query: 987  EEHLPKREREEGRASLRSGRGSDEKAWVGHVSAKDEQKFSEKEYQGREVVRHNDQLKRRD 1046
            +  LPKREREEGR+S R+ RG++EKAWVG VSAKDE K SEK+YQ RE VRHNDQLKRRD
Sbjct: 994  DGPLPKREREEGRSSGRNVRGAEEKAWVGRVSAKDEHKLSEKDYQSRESVRHNDQLKRRD 1053

Query: 1047 RIQDESPHHKGRDDAYTRGNQYATDEKXXXXXXXXXXGDHVANASDNQRAHERKHKEGSR 1106
            RI +ES HHKGRDDAY+RGNQY  +E+           D VANASDNQR HERKHKEGSR
Sbjct: 1054 RIPEESSHHKGRDDAYSRGNQYTAEERRSRQERSSSRSDRVANASDNQRLHERKHKEGSR 1113

Query: 1107 KSKERDVSDLNSLGLAKKSQEIQSGSSNEK 1136
            KSKERD+SDLNSLGL+KKS E  +G SNEK
Sbjct: 1114 KSKERDISDLNSLGLSKKSLENPNGPSNEK 1143


>Medtr4g122070.1 | Fip1 motif protein | HC | chr4:50411541-50404201
           | 20130731
          Length = 1110

 Score = 94.4 bits (233), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 72/152 (47%), Gaps = 46/152 (30%)

Query: 325 LPSHKTIFEVDIENFEEKPWKYPNVDVSDFFNFGLNEDSWKDYCKQLEQLRLESTMQSKI 384
           LP H  I++V+I+ FEEKPW+ P  D++D+FNFGLNE++WK YC  L             
Sbjct: 181 LPWHWKIYDVNIDKFEEKPWRIPGADITDYFNFGLNENTWKQYCSSL------------- 227

Query: 385 RVYESGRTEQEYDPDLPPELAAATGIHDVPVENASFVKSDVGQSDVMKGSGRVRLPLPTG 444
                  T++++D  +   L + +                             +  +P G
Sbjct: 228 -----ASTQEQFDQPVSGSLLSHSS----------------------------KCEVPMG 254

Query: 445 RAIQVEGGYGERLPSIDTRPPRIRDSDAIIEI 476
           RAIQV     +R PS+D R PR  DSD II+I
Sbjct: 255 RAIQVGDSVVDRQPSVDVRRPRSIDSDVIIQI 286