Miyakogusa Predicted Gene
- Lj6g3v1078410.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1078410.1 tr|G7JTY4|G7JTY4_MEDTR LL-diaminopimelate
aminotransferase OS=Medicago truncatula GN=MTR_4g092620
PE,92.59,0,PLP-dependent transferases,Pyridoxal phosphate-dependent
transferase, major domain; no description,P,CUFF.58981.1
(459 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g092620.1 | LL-diaminopimelate aminotransferase | HC | chr... 825 0.0
Medtr2g008430.1 | LL-diaminopimelate aminotransferase | HC | chr... 556 e-158
Medtr4g011820.1 | aspartate aminotransferase | HC | chr4:2998684... 73 5e-13
Medtr8g091280.1 | aspartate aminotransferase | HC | chr8:3810686... 70 4e-12
Medtr7g106830.1 | aspartate aminotransferase | HC | chr7:4351617... 68 2e-11
Medtr8g061360.1 | tyrosine/nicotianamine family aminotransferase... 65 1e-10
Medtr3g072680.1 | aspartate aminotransferase family protein | HC... 62 1e-09
Medtr3g072670.1 | aspartate aminotransferase family protein | HC... 60 6e-09
Medtr1g087760.1 | kynurenine-oxoglutarate transaminase-like prot... 53 8e-07
>Medtr4g092620.1 | LL-diaminopimelate aminotransferase | HC |
chr4:36730817-36736760 | 20130731
Length = 459
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/433 (91%), Positives = 411/433 (94%)
Query: 27 RSQVSLPVKSVSICKCVATPQEAETAYKTKVSRNANMGKLQAGYLFPEVARRRNAHLLTY 86
RSQVSLPVKSVSICKCVATPQEAETAYKT+VSRN N+GKLQAGYLFPE+ARRR+AHLL Y
Sbjct: 27 RSQVSLPVKSVSICKCVATPQEAETAYKTRVSRNENLGKLQAGYLFPEIARRRSAHLLKY 86
Query: 87 PDAKIISLGIGDTTEPIPEVITSAMAKRSQALSTIEGYSGYGAEQGEKPLRSAIASTFYG 146
PDAKIISLGIGDTTEPIPEVITSA+AK+S ALST+EGYSGYGAEQGEKPLRSAIASTFY
Sbjct: 87 PDAKIISLGIGDTTEPIPEVITSALAKKSHALSTLEGYSGYGAEQGEKPLRSAIASTFYP 146
Query: 147 DLGIEEDDIFVSDGAKCDISRLQIVFGSNVKMAVQDPSYPAYVDSSVIMGQTGPFQKPVQ 206
DLGIE+DDIFVSDGAKCDISRLQIVFGSNVKMAVQDPSYPAYVDSSVIMGQTG +QK VQ
Sbjct: 147 DLGIEDDDIFVSDGAKCDISRLQIVFGSNVKMAVQDPSYPAYVDSSVIMGQTGLYQKDVQ 206
Query: 207 KFANIEYMRCNPENGFFPDLSSISRPDIIFFCSPNNPTGAAATREQLTHLVQYAKDNGSI 266
KFANIEYMRCNPENGFFPDLSS+SRPDIIFFCSPNNPTGAAATREQL LVQ+AKDNGSI
Sbjct: 207 KFANIEYMRCNPENGFFPDLSSLSRPDIIFFCSPNNPTGAAATREQLVQLVQFAKDNGSI 266
Query: 267 IVYDSAYAMYISGDNPHSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVVPKQLLFSDG 326
IVYDSAYAMYISGDNP SIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTV+PKQLLFSDG
Sbjct: 267 IVYDSAYAMYISGDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKQLLFSDG 326
Query: 327 FPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGLKAMRDVIGFYKENTSIIVDTFDSLG 386
FPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGLKAMR VIGFYKENT+IIVDTFDSLG
Sbjct: 327 FPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGLKAMRGVIGFYKENTNIIVDTFDSLG 386
Query: 387 FKVYGGKSAPYVWVHFPGRNSWDVFSEILEKTHVVTTXXXXXXXXXXXXIRVSAFGHREN 446
FKVYGGKSAPYVWVHFPG+NSWDVFSEILEKTHVVTT +RVSAFGHREN
Sbjct: 387 FKVYGGKSAPYVWVHFPGQNSWDVFSEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHREN 446
Query: 447 VLEACRRFKQLYK 459
VLEACRRFKQLYK
Sbjct: 447 VLEACRRFKQLYK 459
>Medtr2g008430.1 | LL-diaminopimelate aminotransferase | HC |
chr2:1471885-1475400 | 20130731
Length = 440
Score = 556 bits (1433), Expect = e-158, Method: Compositional matrix adjust.
Identities = 260/425 (61%), Positives = 314/425 (73%)
Query: 33 PVKSVSICKCVATPQEAETAYKTKVSRNANMGKLQAGYLFPEVARRRNAHLLTYPDAKII 92
P V+ C + Q + TKV RN NM KLQ GYLFPE+ R HL YP A +I
Sbjct: 14 PRMLVNRFSCTLSNQRVRIGHSTKVPRNVNMEKLQHGYLFPEIERHELLHLKKYPHANVI 73
Query: 93 SLGIGDTTEPIPEVITSAMAKRSQALSTIEGYSGYGAEQGEKPLRSAIASTFYGDLGIEE 152
LGIGDTT+P+P ++TS+M LST EGY GYG EQGEK LR AIA Y DLGI+
Sbjct: 74 DLGIGDTTKPLPAIVTSSMVDFVHGLSTAEGYKGYGPEQGEKALRKAIAHKVYKDLGIKP 133
Query: 153 DDIFVSDGAKCDISRLQIVFGSNVKMAVQDPSYPAYVDSSVIMGQTGPFQKPVQKFANIE 212
++FVSDGA+CDISRLQ++ G N+K+AVQDPS+PAY+DSSVI+G G F + K+ NIE
Sbjct: 134 SEVFVSDGAQCDISRLQLLMGPNLKIAVQDPSFPAYIDSSVIIGHAGKFVDRIGKYENIE 193
Query: 213 YMRCNPENGFFPDLSSISRPDIIFFCSPNNPTGAAATREQLTHLVQYAKDNGSIIVYDSA 272
YM C P+ FFPDL + SR +IFFCSPNNPTG AATR+QL LV +AK NGSII+YDSA
Sbjct: 194 YMTCGPQTDFFPDLHTTSRAQLIFFCSPNNPTGHAATRKQLQQLVDFAKVNGSIIIYDSA 253
Query: 273 YAMYISGDNPHSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVVPKQLLFSDGFPVAKD 332
Y+ YI+ +P SI+EIPGA+EVAIE SSFSK+AGFTGVRLGWTVVP++LL+S+GFPV D
Sbjct: 254 YSAYITDGSPKSIYEIPGAREVAIEVSSFSKFAGFTGVRLGWTVVPEELLYSNGFPVLHD 313
Query: 333 FNRIVCTCFNGASNISQAGGLACLSPEGLKAMRDVIGFYKENTSIIVDTFDSLGFKVYGG 392
FNRIVCTCFNGASNISQAGGLACLSPEGL A++ ++ +Y EN I+V SLG VYGG
Sbjct: 314 FNRIVCTCFNGASNISQAGGLACLSPEGLNAVQSLVDYYMENARILVTALTSLGLTVYGG 373
Query: 393 KSAPYVWVHFPGRNSWDVFSEILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRENVLEACR 452
K+APYVWV FPG SWDVF+EILE TH++T IR+SAFG R++++EA
Sbjct: 374 KNAPYVWVRFPGSKSWDVFAEILENTHIITIPGSGFGPGGEGYIRISAFGQRDSIIEASE 433
Query: 453 RFKQL 457
R K L
Sbjct: 434 RLKYL 438
>Medtr4g011820.1 | aspartate aminotransferase | HC |
chr4:2998684-2993522 | 20130731
Length = 396
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 124/300 (41%), Gaps = 38/300 (12%)
Query: 125 SGYGAEQGEKPLRSAIASTFYGDLGIEEDDIFVSDGAKCDISRLQIVF---GSNVKMAVQ 181
S YG ++G LR+A+ + + + + V+ GA L + G +V M
Sbjct: 62 SRYGNDEGIPELRAALVKKLRNENNLHKSSVMVTAGANQAFVNLVLTLCDAGDSVVMYA- 120
Query: 182 DPSYPAYVDSSVIMGQTGPFQKPVQKFANIEYMRCNPENGFFPDLSSISR--------PD 233
P Y +S + TG NI NPE +PD + + P
Sbjct: 121 ----PYYFNSYMSFQMTG--------ITNILVGPGNPET-LYPDADWLEKVLSESKPVPK 167
Query: 234 IIFFCSPNNPTGAAATREQLTHLVQYAKDNGSIIVYDSAYAMYISGDNPHSIFEIPGAKE 293
++ +P NPTG L + + GS +V D+ Y ++ D H+ E G
Sbjct: 168 LVTVVNPGNPTGTYIPESLLKRIANLCEKAGSWLVVDNTYEYFMFDDLKHTCVE--GNHV 225
Query: 294 VAIETSSFSKYAGFTGVRLGWTVVPKQLLFSDGFPVAKDFNRIVCTCFNGASNISQAGGL 353
V I SFSK G G R+G+ P ++ + N +C AS ISQ L
Sbjct: 226 VNI--FSFSKAYGMMGWRIGYIAYPSEVEGLGSQLLKVQDNIPIC-----ASIISQH--L 276
Query: 354 ACLSPE-GLKAMRDVIGFYKENTSIIVDTFDSLG-FKVYGGKSAPYVWVHFPGRNSWDVF 411
A S E G + + + + +N I+++ SLG + GG+ A Y+WV P + +D F
Sbjct: 277 ALYSLELGPEWVTERVKTLAKNRQIVMEALSSLGEGSIKGGEGAIYLWVKIPSGHGYDDF 336
>Medtr8g091280.1 | aspartate aminotransferase | HC |
chr8:38106868-38102584 | 20130731
Length = 475
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 38/341 (11%)
Query: 75 VARRRNAHLLTYPDAKIISLGIGDTTEPIPEVITSAMAKRSQALSTIEGYSGYGAEQGEK 134
VA A L +I L G+ P+ T A+ + + EG++ Y G
Sbjct: 85 VAITDQATALVQAGVPVIRLAAGE-----PDFDTPAVIAEAGVNAICEGHTRYTPNAGTL 139
Query: 135 PLRSAIASTFYGDLGIE--EDDIFVSDGAKCDISRLQIVFGS-NVKMAVQDPSYPAYVDS 191
+R AI + G++ D I V++GAK I++ I S ++ + P + +Y +
Sbjct: 140 EIRQAICHKLKEENGLDYTPDQIVVTNGAKQSITQAVIAVCSPGDEVIIPAPFWVSYPEM 199
Query: 192 SVIMGQTGPFQKPVQKFANIEYMRCNPENGFFPD---LSS--ISRPDIIFFCSPNNPTGA 246
+ + T PV + + N F D L S + ++ CSP+NPTG+
Sbjct: 200 ARLADAT-----PV-------ILPTSISNNFLLDPKLLESKITEKSRLLILCSPSNPTGS 247
Query: 247 AATREQLTHLVQ-YAKDNGSIIVYDSAYAMYISGDNPHSIF-EIPGAKEVAIETSSFSKY 304
+ L + + AK +++ D Y I H+ F +P + + FSK
Sbjct: 248 VYPKYLLEEIAKIVAKHPRLLVISDEIYEHIIYAPATHTSFASLPRMWNRTLTVNGFSKA 307
Query: 305 AGFTGVRLGWTVVPKQLLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSP--EGLK 362
TG RLG+ PK + + G +I +G S+ISQ G+A L G +
Sbjct: 308 FAMTGWRLGYIAGPKHFIAAVG--------KIQSQFTSGPSSISQKAGVAALGLGYAGGE 359
Query: 363 AMRDVIGFYKENTSIIVDTFDSL-GFKVYGGKSAPYVWVHF 402
A+ ++ ++E +V +F + G K+ + A Y+++ F
Sbjct: 360 AVSTMVKAFRERRDYLVKSFSEIDGVKISEPQGAFYLFIDF 400
>Medtr7g106830.1 | aspartate aminotransferase | HC |
chr7:43516177-43513083 | 20130731
Length = 473
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 143/342 (41%), Gaps = 44/342 (12%)
Query: 75 VARRRNAHLLTYPDAKIISLGIGDTTEPIPEVITSAMAKRSQALSTI-EGYSGYGAEQGE 133
VA A L +I L G+ P VI A ++ I EG + Y G
Sbjct: 83 VAITDQATALVQAGVPVILLAAGEPDFDSPAVIAQA------GINAIHEGQTRYTPNAGT 136
Query: 134 KPLRSAIASTFY--GDLGIEEDDIFVSDGAKCDISRLQIVFGS-NVKMAVQDPSYPAYVD 190
LR AI ++ D + VS+GAK I++ + S ++ + P Y +Y +
Sbjct: 137 LELRQAICHKLKEENEIAYTPDQVIVSNGAKQSIAQAMLAVCSPGDEVIIPAPFYVSYPE 196
Query: 191 SSVIMGQTGPFQKPVQKFANIEYMRCNPENGFFPD---LSSI--SRPDIIFFCSPNNPTG 245
+ M P P N F D L SI R ++ CSP+NPTG
Sbjct: 197 MAR-MADATPVILPTSISDN-----------FLLDPKLLESIITERSRVLILCSPSNPTG 244
Query: 246 AAATR---EQLTHLVQYAKDNGSIIVYDSAYAMYISGDNPHSIF-EIPGAKEVAIETSSF 301
+ + E++ H+V AK +++ D Y I H+ F +PG + + F
Sbjct: 245 SVYPKKLLEEIAHIV--AKHPRLLVISDEIYEHIIYAPATHTSFASLPGMWGKTLTVNGF 302
Query: 302 SKYAGFTGVRLGWTVVPKQLLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSP--E 359
SK TG RLG+ PK + + G +I +GAS+ISQ +A L
Sbjct: 303 SKPFAMTGWRLGYIAGPKHFISACG--------KIQSQFTSGASSISQKAAVAALGLGYA 354
Query: 360 GLKAMRDVIGFYKENTSIIVDTFDSL-GFKVYGGKSAPYVWV 400
G + + ++ ++E + +V +F + G ++ + A Y+++
Sbjct: 355 GGEVVSTMVKAFRERRNYLVKSFREIDGVEISEPQGAFYLFI 396
>Medtr8g061360.1 | tyrosine/nicotianamine family aminotransferase |
HC | chr8:21128686-21132763 | 20130731
Length = 417
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 99/240 (41%), Gaps = 30/240 (12%)
Query: 90 KIISLGIGDTTE----PIPEVITSAMAKRSQALSTIEGYSGYGAEQGEKPLRSAIASTFY 145
++ISLG+GD T P +V A+A AL + + GY G R+AIA
Sbjct: 41 RVISLGMGDPTLSTCFPNAKVAEEAVA---DALCS-GNFHGYAPTAGLLQARNAIAKYLS 96
Query: 146 GDLGIE--EDDIFVSDGAK--CDISRLQIVFGSNVKMAVQDPSYPAYVDSSVIMGQTGPF 201
DL E DD+F++ G D+S + ++ + + P +P Y F
Sbjct: 97 DDLPYELSSDDVFITCGCTQAIDVS-VALLSRPGANILLPRPGFPIY-------ELCAAF 148
Query: 202 QKPVQKFANIEYMRCNPENGFFPDLSSIS-----RPDIIFFCSPNNPTGAAATREQLTHL 256
++ + + PE G+ DL +I + +P NP G T L +
Sbjct: 149 RQ-----VEVRHYDLLPEKGWEVDLDAIETLVDQNTVALVIINPGNPCGNVYTYHHLEKI 203
Query: 257 VQYAKDNGSIIVYDSAYAMYISGDNPHSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTV 316
+ AK G+I++ D Y GDNP + G+ I S SK G RLGW V
Sbjct: 204 AETAKRLGTIVIADEVYGHLAFGDNPFVPMGVFGSTVPVITLGSLSKRWIVPGWRLGWFV 263
>Medtr3g072680.1 | aspartate aminotransferase family protein | HC |
chr3:32717250-32713023 | 20130731
Length = 402
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 147/340 (43%), Gaps = 44/340 (12%)
Query: 92 ISLGIGDTTEPIPEVITSAMAKRSQALSTIEGYSGYGAEQGEKPLRSAIASTFYGDLGI- 150
I+LG G PE + A QA+ +G + Y G L AIA F D G+
Sbjct: 46 INLGQGFPNFDGPEFVKEAAI---QAIR--DGNNQYARGFGVPDLNIAIAERFKKDTGLI 100
Query: 151 --EEDDIFVSDGAKCDISRLQI-VFGSNVKMAVQDPSYPAYVDSSVIMGQTGPFQKPVQK 207
+++I V+ G I+ + + ++ + P Y +Y + + G
Sbjct: 101 VDPDNEITVTSGCTEAIAATVLGLINPGEEVILFAPFYDSYGATLSMAG----------- 149
Query: 208 FANIEYMRCNPENGFFP--DL-SSISR-PDIIFFCSPNNPTGAAATREQLTHLVQYAKDN 263
ANI+ + P + P DL S+IS+ I +P+NPTG TRE+L + +N
Sbjct: 150 -ANIKSITLRPPDFAVPIDDLKSTISKNTRAILINTPHNPTGKMFTREELDSVASLCIEN 208
Query: 264 GSIIVYDSAYAMYISGDNPH-SIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVVPKQLL 322
++ D Y ++ D H SI +PG E + +S K TG ++GW + P L+
Sbjct: 209 DVLVFTDEVYHK-LAFDMEHISIATLPGMFERTVTMNSLGKSFSLTGWKVGWAIAPPHLM 267
Query: 323 FSDGFPVAKDFNRIVCTCFNGASNISQAGGLACL-SPEG--LKAMRDVIGFYKENTSIIV 379
+ V + I + S+ Q G A L +P+ ++ RD Y +I+V
Sbjct: 268 WG----VRQAHTYIAFSI----SHPLQCGAAAALRAPDSYYVELKRD----YIAKRAILV 315
Query: 380 DTFDSLGFKVYGGKSAPYVWV-HFPGRNSWDV-FSEILEK 417
+ ++GFKV+ +V H P + DV F E L K
Sbjct: 316 EGLKAVGFKVFPTNGTFFVLADHTPFGHENDVAFCEYLIK 355
>Medtr3g072670.1 | aspartate aminotransferase family protein | HC |
chr3:32712273-32709423 | 20130731
Length = 445
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 235 IFFCSPNNPTGAAATREQLTHLVQYAKDNGSIIVYDSAYAMYISGDNPH-SIFEIPGAKE 293
I +P+NPTG T E+L + +N ++ D Y ++ D H SI +PG E
Sbjct: 223 ILLNTPHNPTGKMFTPEELNTIASLCIENDVLVFSDEVYDK-LAFDMEHISIASLPGMFE 281
Query: 294 VAIETSSFSKYAGFTGVRLGWTVVPKQLLFSDGFPVAKDFNRIVCTCFNGASNISQAGGL 353
+ +S K TG ++GW + P L + G A F F ++ + A +
Sbjct: 282 RTVTMNSLGKTFSLTGWKIGWAIAPPHLTW--GVRQAHAF-----LTFATSNPMQWAAAV 334
Query: 354 ACLSPEGL--KAMRDVIGFYKENTSIIVDTFDSLGFKVYGGKSAPYVWV-HFPGRNSWDV 410
A +P+ + RD Y SI+V+ ++GFKV+ +V V H P + D+
Sbjct: 335 ALRAPDSYYTELKRD----YMAKRSILVEGLKAVGFKVFPSSGTYFVVVDHTPFGHENDI 390
Query: 411 -FSEILEK 417
F E L K
Sbjct: 391 AFCEYLVK 398
>Medtr1g087760.1 | kynurenine-oxoglutarate transaminase-like protein
| HC | chr1:39273274-39269554 | 20130731
Length = 403
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 57/137 (41%), Gaps = 15/137 (10%)
Query: 182 DPSYPAYVDSSVIMGQTGPFQKPVQKFANIEYMRCNPENGFFPD--LSSIS-RPDIIFFC 238
DPSY Y V M P P+ P+ P L+SI+ R I
Sbjct: 116 DPSYETY-QGCVTMAGGVPIHVPLDP----------PQWTLDPRKLLTSITERTKAIILN 164
Query: 239 SPNNPTGAAATREQLTHLVQYAKDNGSIIVYDSAYAMYISGDNPH-SIFEIPGAKEVAIE 297
SP+NPTG T+++L + + + D Y + H S+ PG +E I
Sbjct: 165 SPHNPTGKVFTKDELETIAGACCSRNCLAITDEVYEHITYDNQKHISLASFPGMQERTII 224
Query: 298 TSSFSKYAGFTGVRLGW 314
TSS SK TG R+GW
Sbjct: 225 TSSLSKTFSVTGWRIGW 241