Miyakogusa Predicted Gene

Lj6g3v1078310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1078310.1 Non Characterized Hit- tr|I1JGN9|I1JGN9_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,86.21,0,FA_desaturase,Fatty acid desaturase, type 1,CUFF.58971.1
         (155 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g460790.1 | fatty-acid desaturase | HC | chr2:25082950-250...   276   4e-75
Medtr4g130980.1 | fatty-acid desaturase | HC | chr4:54622427-546...   275   2e-74
Medtr3g464330.1 | microsomal omega-3 fatty acid desaturase | HC ...    48   4e-06
Medtr5g071170.1 | microsomal omega-3 fatty acid desaturase | HC ...    48   4e-06

>Medtr2g460790.1 | fatty-acid desaturase | HC |
           chr2:25082950-25077127 | 20130731
          Length = 447

 Score =  276 bits (707), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 125/145 (86%), Positives = 135/145 (93%)

Query: 11  FKFWLMPWLGYHFWMSTFTVVHHTAPHIPFKSSGEWNAAQAQLNGTIHCDYPKWVEILCH 70
            K+W MPWLGYHFWMSTFTVVHHTAPHIPFK   +WNAAQAQLNGT+HCDYPKWVEILCH
Sbjct: 303 LKYWFMPWLGYHFWMSTFTVVHHTAPHIPFKYYQDWNAAQAQLNGTVHCDYPKWVEILCH 362

Query: 71  DINVHIPHHISPRIPWYNLRAAHKSLQENWGKYMNEATWNWRLMKTIMTVCHVYDKERNY 130
           DINVHIPHHISP+IP YNLRAAHKSLQENWGKY+NEA+WNWRLMKTIMT CHVYDK+RNY
Sbjct: 363 DINVHIPHHISPKIPSYNLRAAHKSLQENWGKYLNEASWNWRLMKTIMTECHVYDKDRNY 422

Query: 131 VAFDELYPEESRPVTLLRKAMPDYA 155
           VAFDEL P+ESRP+TLLRK MP+Y 
Sbjct: 423 VAFDELDPKESRPITLLRKTMPEYV 447


>Medtr4g130980.1 | fatty-acid desaturase | HC |
           chr4:54622427-54616212 | 20130731
          Length = 446

 Score =  275 bits (702), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 121/145 (83%), Positives = 137/145 (94%)

Query: 11  FKFWLMPWLGYHFWMSTFTVVHHTAPHIPFKSSGEWNAAQAQLNGTIHCDYPKWVEILCH 70
            KFWLMPWLGYHFWMSTFT+VHHTAPHIPFK+S EWNAAQAQLNGT+HC YP+W+EILCH
Sbjct: 302 IKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKNSEEWNAAQAQLNGTVHCAYPQWIEILCH 361

Query: 71  DINVHIPHHISPRIPWYNLRAAHKSLQENWGKYMNEATWNWRLMKTIMTVCHVYDKERNY 130
           DINVHIPHHISP+IP YNLRAAHKS+QENWGKY+NEA+WNWRLMKTIMTVCHVYDK++NY
Sbjct: 362 DINVHIPHHISPKIPSYNLRAAHKSIQENWGKYLNEASWNWRLMKTIMTVCHVYDKQQNY 421

Query: 131 VAFDELYPEESRPVTLLRKAMPDYA 155
           V+FDE+ P+ESRP+  L+K MPDYA
Sbjct: 422 VSFDEVAPKESRPIRFLKKVMPDYA 446


>Medtr3g464330.1 | microsomal omega-3 fatty acid desaturase | HC |
           chr3:25841263-25836811 | 20130731
          Length = 385

 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 11  FKFWLMPWLGYHFWMSTFTVVHH--TAPHIPFKSSGEWNAAQAQLNGTIHCDYPKWVEIL 68
            K + +P+  +  W+   T +HH   +  +P+    EW+  +  L  T+  DY  WV  +
Sbjct: 241 LKLYGVPYWIFIMWLDFVTYMHHHGYSQKLPWYRGQEWDYLRGGLT-TVDRDY-GWVNNI 298

Query: 69  CHDINVHIPHHISPRIPWYNLRAAHKSLQENWGKYMNE 106
            HDI  H+ HH+ P+IP Y+L  A ++ +   GKY  E
Sbjct: 299 HHDIGTHVIHHLFPQIPHYHLVEATEAAKPVLGKYYRE 336


>Medtr5g071170.1 | microsomal omega-3 fatty acid desaturase | HC |
           chr5:30187279-30184947 | 20130731
          Length = 391

 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)

Query: 11  FKFWLMPWLGYHFWMSTFTVVHHTA--PHIPFKSSGEWNAAQAQLNGTIHCDYPKWVEIL 68
            K + +P+  +  W+   T +HH      +P+    EW   +  L  T+  DY  W+  +
Sbjct: 250 LKLYGVPYWIFVMWLDFVTYLHHHGYTQKLPWYRGQEWTYLRGGLT-TVDRDY-GWINNI 307

Query: 69  CHDINVHIPHHISPRIPWYNLRAAHKSLQENWGKYMNE 106
            HDI  H+ HH+ P+IP Y+L  A K+ +  +G Y  E
Sbjct: 308 HHDIGTHVVHHLFPQIPHYHLVEATKAAKPIFGDYYRE 345