Miyakogusa Predicted Gene

Lj6g3v1078170.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1078170.1 Non Characterized Hit- tr|B8LZ38|B8LZ38_TALSN 26S
proteasome non-ATPase regulatory subunit Nas2, put,31.28,4e-19,PDZ
domain-like,PDZ domain; no description,NULL; SUBFAMILY NOT NAMED,NULL;
26S PROTEASOME NON-ATPASE,NODE_38753_length_776_cov_45.021908.path2.1
         (228 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g460780.1 | 26S proteasome non-ATPase regulatory subunit-l...   339   1e-93
Medtr2g460780.2 | 26S proteasome non-ATPase regulatory subunit-l...   327   5e-90
Medtr2g460780.3 | 26S proteasome non-ATPase regulatory subunit-l...   313   6e-86

>Medtr2g460780.1 | 26S proteasome non-ATPase regulatory subunit-like
           protein | HC | chr2:25071071-25075631 | 20130731
          Length = 227

 Score =  339 bits (869), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 167/229 (72%), Positives = 194/229 (84%), Gaps = 3/229 (1%)

Query: 1   MVATNVKAETMSLMDKRTSLEAEMNAIITHLTQ-PGAPGLSGNLIDSEGFPRSDIDIPAV 59
           MV TNVKAET SLMDKR++LE+EMN+II  L+Q PGAPGLSGNLIDSEGFPRSDID+P V
Sbjct: 1   MVGTNVKAETKSLMDKRSALESEMNSIIARLSQFPGAPGLSGNLIDSEGFPRSDIDVPLV 60

Query: 60  XXXXXXXXXXXNDHKEVTEKINQNIQILHSARLGKSPFKNSGNDEGSDTQTSTAVDTLAS 119
                      ND+ +VT+KINQNI ILHS RLG    KNS ND+GSD QTS+  +T+AS
Sbjct: 61  RAERRRLAELRNDYTDVTDKINQNIHILHSTRLGN--HKNSDNDDGSDMQTSSTAETVAS 118

Query: 120 TPGQNVLLRQNPNSMDVDVLVSRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDDL 179
           TP QNVL+  +PNSMDVDVLVSRPFA+VDEI+DASPAVEDGLQLGDQILKFGNVEAG++L
Sbjct: 119 TPSQNVLVSLSPNSMDVDVLVSRPFAVVDEISDASPAVEDGLQLGDQILKFGNVEAGENL 178

Query: 180 LQRLSSESQSNLDRPIPVVITRQGTVVNLTITPRTWQGRGLLGCHFRIL 228
           L RL+SE+QS++ + +PVVI RQGTV+NLT+TPRTWQGRGLLGCHFRIL
Sbjct: 179 LHRLASEAQSSMGQTVPVVIMRQGTVINLTVTPRTWQGRGLLGCHFRIL 227


>Medtr2g460780.2 | 26S proteasome non-ATPase regulatory subunit-like
           protein | HC | chr2:25071071-25075631 | 20130731
          Length = 221

 Score =  327 bits (838), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 162/229 (70%), Positives = 189/229 (82%), Gaps = 9/229 (3%)

Query: 1   MVATNVKAETMSLMDKRTSLEAEMNAIITHLTQ-PGAPGLSGNLIDSEGFPRSDIDIPAV 59
           MV TNVKAET SLMDKR++LE+EMN+II  L+Q PGAPGLSGNLIDSEGFPRSDID+P V
Sbjct: 1   MVGTNVKAETKSLMDKRSALESEMNSIIARLSQFPGAPGLSGNLIDSEGFPRSDIDVPLV 60

Query: 60  XXXXXXXXXXXNDHKEVTEKINQNIQILHSARLGKSPFKNSGNDEGSDTQTSTAVDTLAS 119
                      ND+ +VT+KINQNI ILHS RLG        N + SD QTS+  +T+AS
Sbjct: 61  RAERRRLAELRNDYTDVTDKINQNIHILHSTRLG--------NHKNSDMQTSSTAETVAS 112

Query: 120 TPGQNVLLRQNPNSMDVDVLVSRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDDL 179
           TP QNVL+  +PNSMDVDVLVSRPFA+VDEI+DASPAVEDGLQLGDQILKFGNVEAG++L
Sbjct: 113 TPSQNVLVSLSPNSMDVDVLVSRPFAVVDEISDASPAVEDGLQLGDQILKFGNVEAGENL 172

Query: 180 LQRLSSESQSNLDRPIPVVITRQGTVVNLTITPRTWQGRGLLGCHFRIL 228
           L RL+SE+QS++ + +PVVI RQGTV+NLT+TPRTWQGRGLLGCHFRIL
Sbjct: 173 LHRLASEAQSSMGQTVPVVIMRQGTVINLTVTPRTWQGRGLLGCHFRIL 221


>Medtr2g460780.3 | 26S proteasome non-ATPase regulatory subunit-like
           protein | HC | chr2:25071071-25075631 | 20130731
          Length = 213

 Score =  313 bits (803), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 159/229 (69%), Positives = 184/229 (80%), Gaps = 17/229 (7%)

Query: 1   MVATNVKAETMSLMDKRTSLEAEMNAIITHLTQ-PGAPGLSGNLIDSEGFPRSDIDIPAV 59
           MV TNVKAET SLMDKR++LE+EMN+II  L+Q PGAPGLSGNLIDSEGFPRSDID+P V
Sbjct: 1   MVGTNVKAETKSLMDKRSALESEMNSIIARLSQFPGAPGLSGNLIDSEGFPRSDIDVPLV 60

Query: 60  XXXXXXXXXXXNDHKEVTEKINQNIQILHSARLGKSPFKNSGNDEGSDTQTSTAVDTLAS 119
                      ND+ +VT+KINQNI ILHS RLG    KNS              +T+AS
Sbjct: 61  RAERRRLAELRNDYTDVTDKINQNIHILHSTRLGN--HKNS--------------ETVAS 104

Query: 120 TPGQNVLLRQNPNSMDVDVLVSRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDDL 179
           TP QNVL+  +PNSMDVDVLVSRPFA+VDEI+DASPAVEDGLQLGDQILKFGNVEAG++L
Sbjct: 105 TPSQNVLVSLSPNSMDVDVLVSRPFAVVDEISDASPAVEDGLQLGDQILKFGNVEAGENL 164

Query: 180 LQRLSSESQSNLDRPIPVVITRQGTVVNLTITPRTWQGRGLLGCHFRIL 228
           L RL+SE+QS++ + +PVVI RQGTV+NLT+TPRTWQGRGLLGCHFRIL
Sbjct: 165 LHRLASEAQSSMGQTVPVVIMRQGTVINLTVTPRTWQGRGLLGCHFRIL 213