Miyakogusa Predicted Gene

Lj6g3v1067120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1067120.1 tr|A9SXZ9|A9SXZ9_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_85491
,30.18,0.000000000001,PREDICTED: SIMILAR TO SMALL HEAT SHOCK PROTEIN
24.1,NULL; SMALL HEAT-SHOCK PROTEIN (HSP20) FAMILY,NU,CUFF.58916.1
         (253 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g091960.1 | peroxisomal small heat shock protein | HC | ch...   364   e-101
Medtr3g086050.1 | localized small heat shock protein | HC | chr3...    49   6e-06

>Medtr5g091960.1 | peroxisomal small heat shock protein | HC |
           chr5:40143233-40140255 | 20130731
          Length = 259

 Score =  364 bits (934), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 178/260 (68%), Positives = 207/260 (79%), Gaps = 10/260 (3%)

Query: 1   MESELVRRRIDMISAHFAPSDEISTTHVLPLNCSGSMNSVLSRRDNKVYFARQASASFGY 60
           ME+E V+RR+D I+AHFA +++IS+TH+LP+NCSGS+NSVL R DNKVYFARQ+SASFGY
Sbjct: 1   MENEFVKRRLDTIAAHFASNEDISSTHLLPMNCSGSLNSVLRRCDNKVYFARQSSASFGY 60

Query: 61  FMRQASVKEGDSTTFIAPKIHGGKSEGPSNSRAPCFARPARTE---------PMTKVQGG 111
           FMRQ S +EGDST+ +APK +  K EGP+ +R PCFARPAR E         PMTK+QG 
Sbjct: 61  FMRQTSAEEGDSTSSVAPKTNMAKYEGPNYAREPCFARPARKESIVSNSVVQPMTKMQGY 120

Query: 112 DSSSIEPPKFSRPSKQIGQRNQLNYKKNSCHPDTGTVWSPRMDVVESEGKYVIAVEVPGV 171
           D  S+EPP F+RPSKQI Q  QLN +K   H + G  WSPRMDV ESE KYVI VEVPGV
Sbjct: 121 DFDSLEPPSFARPSKQIRQGEQLNNEKRIHHSEIGIEWSPRMDVAESESKYVIMVEVPGV 180

Query: 172 SINDIRVEVDDQKLCVKGRRSTSYLRVAGCPKTSSFSSYHKREILHGPYEVVWSLPPGVN 231
           S+NDIRVEVDDQKL +KGRRST   RVAGCP  +S SSYHKREIL+GPYEVVW LP GVN
Sbjct: 181 SVNDIRVEVDDQKLSIKGRRSTGSWRVAGCP-NASVSSYHKREILYGPYEVVWPLPHGVN 239

Query: 232 MDNISAEFSDGFLQIIVPKV 251
            DN+SAEF DGFLQII+PKV
Sbjct: 240 KDNVSAEFLDGFLQIIIPKV 259


>Medtr3g086050.1 | localized small heat shock protein | HC |
           chr3:38935304-38936374 | 20130731
          Length = 221

 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 10/100 (10%)

Query: 154 DVVESEGKYVIAVEVPGVSINDIRVEVDDQKLCVKGRRSTSYLRVAGCPKTSSFSSYHKR 213
           ++ E E +Y +  ++PG++  D++V V+++ L VK  ++           + S+  Y  R
Sbjct: 122 EIKEGESEYKMRFDMPGMNKEDVKVWVEEKMLVVKAEKAPKKKNDEDEEWSKSYGRYSSR 181

Query: 214 EILHGPYEVVWSLPPGVNMDNISAEFSDGFLQIIVPKVSV 253
                      +LP  V  +NI AE  DG L I +PK + 
Sbjct: 182 I----------ALPENVQFENIKAEVKDGVLYITIPKATT 211