Miyakogusa Predicted Gene

Lj6g3v1055570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1055570.1 Non Characterized Hit- tr|G7J6P6|G7J6P6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,75.34,0.0000000000003,seg,NULL,CUFF.58859.1
         (73 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g080060.1 | Clavata3/ESR (CLE) gene family member MtCLE23 ...    77   3e-15
Medtr5g085990.1 | Clavata3/ESR (CLE) gene family member MtCLE17 ...    52   9e-08

>Medtr3g080060.1 | Clavata3/ESR (CLE) gene family member MtCLE23 |
          HC | chr3:36207269-36207546 | 20130731
          Length = 72

 Score = 77.4 bits (189), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/73 (60%), Positives = 48/73 (65%), Gaps = 3/73 (4%)

Query: 1  MKQXXXXXXXXXXXXXTPTSHAIRTKFSGPSTSTKQAFHLGGESPINSSSRGLEFESQKR 60
          MKQ             TPTS+  RTKFSGPST  +QAFH    SPI  SSRG EFESQKR
Sbjct: 3  MKQFHLFLLFTILLFLTPTSYTTRTKFSGPSTQ-QQAFHRWANSPI--SSRGKEFESQKR 59

Query: 61 MVPTGSNPLHNKR 73
           VPTG+NPLHNK+
Sbjct: 60 RVPTGANPLHNKK 72


>Medtr5g085990.1 | Clavata3/ESR (CLE) gene family member MtCLE17 |
          HC | chr5:37177432-37176480 | 20130731
          Length = 72

 Score = 52.4 bits (124), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/59 (61%), Positives = 43/59 (72%), Gaps = 4/59 (6%)

Query: 17 TPTSHAIRTKFSGPSTSTKQ-AFHL-GGESPINSSSRGLEFESQKRMVPTGSNPLHNKR 73
          TP  +AIR KFS PS+++   AFH+    SP  S S+G EF+SQKR VPTGSNPLHNKR
Sbjct: 16 TPRVYAIRIKFSSPSSTSSHHAFHIPFFNSP--SRSKGKEFKSQKRKVPTGSNPLHNKR 72