Miyakogusa Predicted Gene

Lj6g3v1055550.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1055550.2 Non Characterized Hit- tr|B8A2H8|B8A2H8_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,33.81,2e-18,SUBFAMILY
NOT NAMED,NULL; PROTEIN FOLDING REGULATOR,NULL; no
description,Armadillo-like helical; Fes,CUFF.58858.2
         (372 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g080080.1 | nucleotide exchange factor SIL1 | HC | chr3:36...   508   e-144
Medtr4g021570.1 | armadillo/beta-catenin-like repeat protein | H...    91   1e-18

>Medtr3g080080.1 | nucleotide exchange factor SIL1 | HC |
           chr3:36220203-36216221 | 20130731
          Length = 378

 Score =  508 bits (1308), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 264/352 (75%), Positives = 299/352 (84%), Gaps = 2/352 (0%)

Query: 23  NFTSGRPSWSTAAEEPDLASPDD--SGPDGGFSSLDSMLQWAIGNSDPEKLKESAQAQQR 80
           N TS +P  STA +E DL  PD   S  DGGF S+DSML WAI +SDPEKLKESAQ+ Q+
Sbjct: 27  NLTSRQPLLSTAVDESDLLPPDAALSDSDGGFPSMDSMLHWAISHSDPEKLKESAQSHQK 86

Query: 81  LSPNDIQKRQMEIKELMEKMRMPSDAELMKVAISDLNNVSTSLEDRHRALQELLELVESI 140
           LSP+++QKRQ+EIKE+MEK +M SDAELMK+AI DLNN STSLEDR+RAL ELLELVE +
Sbjct: 87  LSPSELQKRQLEIKEIMEKTKMLSDAELMKIAIKDLNNASTSLEDRYRALLELLELVEPL 146

Query: 141 DNANDLNKLGGLSVVTQELNHSDPSIRAVAAWVLGKASQNNPIVQQQVLELGVLSRLIIM 200
           DNANDLNKLGGL  VTQEL H D  IRA AAWVLGKASQNNP  QQQVLELGVLSRLI M
Sbjct: 147 DNANDLNKLGGLHAVTQELKHYDSGIRATAAWVLGKASQNNPTFQQQVLELGVLSRLIAM 206

Query: 201 VKSDSTEEANKALYTVSALIRNNLASQALFYAEAGGSMLQDILRNASVDIRLRRKAVLLL 260
           VKS S EE  KALY VSAL RNNLA+Q LFYAE GG MLQDILRNAS+DI+LRRKAVLLL
Sbjct: 207 VKSSSIEEGIKALYAVSALTRNNLANQELFYAEGGGLMLQDILRNASIDIKLRRKAVLLL 266

Query: 261 ADLAEYQLEHVDKEEPSFFSDQDLLKSVVDLTKSTELDLQEKALVAIKNLLQLRTTEARV 320
            DLA+YQLE+V+K+EP FF++QDLLKSVVDLT ST+LDLQEKALVAIK+LLQLRTT+ARV
Sbjct: 267 TDLADYQLENVNKDEPPFFNNQDLLKSVVDLTASTDLDLQEKALVAIKSLLQLRTTKARV 326

Query: 321 FKDFCALGDALSRMRQLLHDLMADEYQKDYATDVESLRIEVEHIFHRKLVKQ 372
           F+D CALGDAL+R ++LLHDLMADE Q+DY  DVE++RIEVE I+HRKL  Q
Sbjct: 327 FRDLCALGDALNRTKELLHDLMADEDQRDYVMDVENVRIEVESIYHRKLENQ 378


>Medtr4g021570.1 | armadillo/beta-catenin-like repeat protein | HC |
           chr4:7067247-7062577 | 20130731
          Length = 370

 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 134/263 (50%), Gaps = 23/263 (8%)

Query: 56  DSMLQWAIGNSD----PEKLKESAQAQQRLSPNDIQKRQMEIKELMEKMRMPSDAELMKV 111
           D +L+W+I NSD    P  L E     ++     +Q + ++I + M+++ +     +MK 
Sbjct: 9   DGLLKWSIANSDGTRQPRNLSEE---DRKWFMEAMQAQTVDIVKRMKEITL-----VMKT 60

Query: 112 AISDLNNVSTSLEDRHRALQELLELVESIDNANDLNKLGGLSVVTQELNHSDPSIRAVAA 171
              +L N   +  D    L EL E VESID ANDL+ +GGL+ +   L +   +IRA AA
Sbjct: 61  PEQELENQGVTPADIEDMLDELQEHVESIDMANDLHTIGGLTPLLAYLKNPHANIRAKAA 120

Query: 172 WVLGKASQNNPIVQQQVLELGVLSRLIIMVKSDSTEEA-NKALYTVSALIRNNLASQALF 230
            V+    QNNP  QQ V+E      L+    SD    A  KAL  +S+LIR+N    A F
Sbjct: 121 DVVTTIVQNNPKSQQLVMEANGFEPLVSNFSSDPDVTARTKALGAISSLIRHNKPGVAAF 180

Query: 231 YAEAGGSMLQDILRNASVDIRLRRKAVLLLADLAEYQLEHVDKEEPSFFSDQDLLKSVVD 290
               G + L+D L   S ++R +RKA+ L+     + L   +  + +   +  L ++++ 
Sbjct: 181 RLANGYAALRDAL--TSENVRFQRKALNLI-----HYLLLENSSDCNIVKELGLHRTMMH 233

Query: 291 LTKSTELDLQEKALVAIKNLLQL 313
           L  S + D++E AL   K+L +L
Sbjct: 234 LASSDDADVREAAL---KSLFEL 253