Miyakogusa Predicted Gene

Lj6g3v1052250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1052250.1 Non Characterized Hit- tr|I1L4K8|I1L4K8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,31.9,0.00000000003,seg,NULL,CUFF.58839.1
         (351 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g488200.1 | hypothetical protein | HC | chr6:33233499-3323...    57   4e-08
Medtr6g488190.1 | hypothetical protein | HC | chr6:33231399-3323...    56   5e-08
Medtr6g488240.1 | hypothetical protein | LC | chr6:33245335-3324...    52   8e-07

>Medtr6g488200.1 | hypothetical protein | HC |
           chr6:33233499-33234597 | 20130731
          Length = 299

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 16/161 (9%)

Query: 119 LWVLVA--AWYKGGVSNPLNLYD--KNALNNPMKMVAADGSVTFTYLNFYRVQGNDKQKG 174
           +W  ++    + G  + PL L    KN          A G V  T +  Y   G+  ++G
Sbjct: 93  IWFAISKDTSFLGSTTPPLLLNGGFKNCKQRSNSTTNASGYVMETCVYLY---GSGSRRG 149

Query: 175 LVVIE-VKKMRMEESPFEVIVSHYFA-SLG-----KTKAGFSVVAKMRGGD--GDCLKLE 225
            +V+E ++K    E P +V V+HY+A S+      K   G S++  ++     G  + + 
Sbjct: 150 FLVLEEMRKSGNAEKPCKVTVAHYYAVSIRNLFSYKIDIGLSMIVMIQPSSEVGLDITVH 209

Query: 226 GPILHPATDLFEMFDKVSKNGHWTPNLCPHCAKASNYNSNS 266
           GP  HPA  L  MF +V K G W P  C HCA     +S+S
Sbjct: 210 GPSQHPAKALHSMFHEVLKTGIWKPTKCSHCASMIRDHSDS 250


>Medtr6g488190.1 | hypothetical protein | HC |
           chr6:33231399-33230154 | 20130731
          Length = 339

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 9/95 (9%)

Query: 174 GLVVIEVKKMRMEES-PFEVIVSHYFA-------SLGKTKAGFSVVAKMRGGDGDC-LKL 224
           GL+V+E KK   E+   +   V+HY+A       +  K   G S+V      +G     +
Sbjct: 114 GLIVVEGKKRSKEDKYLYTTTVTHYYAISQGNMFTQNKIDIGLSMVVNFNVSNGSINCTV 173

Query: 225 EGPILHPATDLFEMFDKVSKNGHWTPNLCPHCAKA 259
           +GP  HP+  LF MF++V ++G+W    C HCA A
Sbjct: 174 KGPDQHPSAALFYMFEQVCRSGNWKLTACFHCAIA 208


>Medtr6g488240.1 | hypothetical protein | LC |
           chr6:33245335-33247008 | 20130731
          Length = 294

 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 15/137 (10%)

Query: 134 PLN-LYDKNALNNPMKMVAADGSVTFTYLNFYRVQGNDKQKGLVVIEVKKMRMEESPFEV 192
           P+N LY+ N  N    +    G +T T + +   +G + +  L+V++ K+    E P  +
Sbjct: 83  PINQLYETNFNNETSNLW---GGITKTDVAY---RGVENEGNLLVVQQKRKPGVEKPCAI 136

Query: 193 IVSHYFA-------SLGKTKAGFSVVAKMRGGDGDC-LKLEGPILHPATDLFEMFDKVSK 244
            V+HY+A       S  K++AG S+   +R  + D  + ++ P  HP+    +MF++VS+
Sbjct: 137 RVAHYYAYSKQFCFSRQKSEAGLSITVDIRVLNNDLDVSMKDPYEHPSLVFLQMFEQVSR 196

Query: 245 NGHWTPNLCPHCAKASN 261
              W      HCA  ++
Sbjct: 197 TWIWKWTAWSHCAAQTH 213