Miyakogusa Predicted Gene

Lj6g3v1049120.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1049120.2 Non Characterized Hit- tr|I1KDG6|I1KDG6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16883
PE,87.78,0,SecY,SecY/SEC61-alpha family; SECY_1,SecY/SEC61-alpha
family; SECY_2,SecY/SEC61-alpha family; 3a0501,CUFF.58836.2
         (536 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g460600.1 | preprotein translocase subunit SecY | HC | chr...   812   0.0  
Medtr7g094800.1 | preprotein translocase subunit SecY | HC | chr...   135   7e-32

>Medtr2g460600.1 | preprotein translocase subunit SecY | HC |
           chr2:24985197-24980945 | 20130731
          Length = 546

 Score =  812 bits (2097), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/537 (81%), Positives = 464/537 (86%), Gaps = 16/537 (2%)

Query: 1   MLITVRQASSSP-LCLFLD-RLTVSKPSSKSFKTSICQAHRTPSPSHSWSSGNLSTSYEA 58
           MLITV+QAS SP  C+ L+ R  + KPSS S  +SIC+A  +     S +  +LSTS + 
Sbjct: 22  MLITVKQASPSPRWCVRLNNRPLIPKPSSSSSSSSICRATLSVR-RISTTQPHLSTSCDV 80

Query: 59  ANFDPLGINPDLSSGLSSTWKDLVCLFSQPFESTSSTEKGKPNSSRGVAAAIEDSSIDFG 118
           ANFDPLGIN   SS  SSTWK++V LF    ES+     G      GVAAAIEDSSIDFG
Sbjct: 81  ANFDPLGIN--SSSSSSSTWKNIVSLF----ESSEKPRGG------GVAAAIEDSSIDFG 128

Query: 119 DXXXXXXXXXXXXXXXXXVLSRLGVYIPLGGVNREAFIGNLDQNSLLSTLDSFSGGGIGR 178
           D                  LSRLGVYIPLGGVNREAF+GNLDQNSLLSTLDSFSGGGIGR
Sbjct: 129 DFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFLGNLDQNSLLSTLDSFSGGGIGR 188

Query: 179 LGLCSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQAI 238
           LG+CSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQAI
Sbjct: 189 LGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQAI 248

Query: 239 GQVLFLRPYVNDFSTEWVISSVILLTLGSAFTTYIGERITDLKLGNGTSLLIFTNIISYL 298
           GQVLFLRPYVNDF+TEW ++SVILLTLGS  TTYIGE+ITDLKLGNGTSLLIFTNIISYL
Sbjct: 249 GQVLFLRPYVNDFTTEWALTSVILLTLGSVITTYIGEQITDLKLGNGTSLLIFTNIISYL 308

Query: 299 PASFGRTFSEAFNDANYVGLATIIVSFFLLVVGIVYVQEAERKIPLNYASRLT-RSSGLE 357
           PASFGRTF++AFNDANYVGL TIIVSFFLLVVGIVYVQEAERKIP+NYASR T +S GLE
Sbjct: 309 PASFGRTFAQAFNDANYVGLVTIIVSFFLLVVGIVYVQEAERKIPINYASRFTSKSGGLE 368

Query: 358 KSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSPLKSAAMALNPGGSFYLPFNIFL 417
           KSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLS LK+AA+ALNPGGSFYLPFNI L
Sbjct: 369 KSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSALKNAAVALNPGGSFYLPFNILL 428

Query: 418 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGRSTATFIKTVLSRISVLGSTFLAIL 477
           IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGRSTATFIKTVLSRISVLGSTFLAIL
Sbjct: 429 IAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGRSTATFIKTVLSRISVLGSTFLAIL 488

Query: 478 AAGPAVVEQTTHLTAFRGFAGTSILILVGCATDTARKVQAEIISQKYKNIEFYDFDK 534
           AAGPA+VEQT HLTAFRGFAGTSILILVGCATDTARKV+AEIISQKYKNIE YDFDK
Sbjct: 489 AAGPAIVEQTAHLTAFRGFAGTSILILVGCATDTARKVRAEIISQKYKNIELYDFDK 545


>Medtr7g094800.1 | preprotein translocase subunit SecY | HC |
           chr7:37833621-37826563 | 20130731
          Length = 547

 Score =  135 bits (341), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 115/403 (28%), Positives = 193/403 (47%), Gaps = 28/403 (6%)

Query: 137 VLSRLGVYIPLGGVNREAFIGN---LDQNSLLSTLDSFSGGGIGRLGLCSLGIVPFINAQ 193
           V+SR+G +IPL G +R     +       S +  L  FS     +L L  LG  P I A 
Sbjct: 135 VISRVGYFIPLPGFDRRLIPKDYMSFVSGSSVDELGDFSSEL--KLSLFQLGNSPQIIAS 192

Query: 194 IVFQLLAQVYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLFLRPY---VND 250
           I+ Q+   V P L  L+K EG  G +KI  Y  + S+GFAI++A+    +  PY      
Sbjct: 193 IIMQVFCHVVPSLVKLRK-EGLDGHEKIKSYIWWMSLGFAIMEALIVSCYSLPYSIYAAS 251

Query: 251 FSTEWVISSVILLTLGSAFTTYIGERITDLKLGNGTSLLIFTNI-ISYLPASFGRTFSEA 309
           +  + V+ + +LL  G+   T+I + I++   G G+SL I   I I Y+          +
Sbjct: 252 YRFKHVMVTTLLLVCGAMTITWICDTISESGFGQGSSLFICVGILIGYMDTLHKMVTQLS 311

Query: 310 FNDANYVGLATIIVSFFLLV-VGIVYVQEAERKIPLNYASRLTRSSGLEKSA------YL 362
            +  ++      ++  F +V +  V V E  RK+ L Y      S+  E+S       Y+
Sbjct: 312 VSAVSWWPYVLAVLGLFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYI 371

Query: 363 PFKVNSSGVMPIIFSTSSLALPGTLARFTGLSPLKSAAMALNP----GGSFYLPFNIFLI 418
           PF +N +G+ P++ ++  LA P  +A   G    +     LNP    G   ++ ++I+  
Sbjct: 372 PFNINPAGMQPVLTTSYLLAFPSIVAGLLGSPFWEHVKEMLNPDTSVGAEPWVYYSIY-- 429

Query: 419 AFFNYYYTFLQLD--PDDVSEQLKRQGASIPLVRPGRSTATFIKTVLSRISVLGSTFLAI 476
           AFF + +    +   P ++++ L + GA IP ++PG++T  ++  V +     G   L++
Sbjct: 430 AFFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKATIEYLSKVQASTRFWGGLLLSV 489

Query: 477 LAAGPAVVEQTTHLTAFRGFA--GTSILILVGCATDTARKVQA 517
           LA   +V++     T   GFA   TS+LI+VG   +  R  QA
Sbjct: 490 LATTSSVLDHYLRRTN-AGFAIGFTSVLIIVGSIIELRRSYQA 531