Miyakogusa Predicted Gene
- Lj6g3v1048980.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v1048980.1 Non Characterized Hit- tr|I1LVX1|I1LVX1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18132
PE,78.95,0,seg,NULL; TM4_1,Tetraspanin, conserved site;
Tetraspannin,Tetraspanin/Peripherin; TMFOUR,Tetraspanin,CUFF.58846.1
(266 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g129670.1 | tetraspanin family protein | HC | chr4:5404116... 274 5e-74
Medtr4g061010.1 | tetraspanin family protein | HC | chr4:2244942... 144 1e-34
Medtr8g066790.1 | tetraspanin family protein | HC | chr8:2777798... 138 5e-33
Medtr8g101600.1 | tetraspanin family protein | HC | chr8:4270409... 137 1e-32
Medtr6g033335.1 | tetraspanin family protein | HC | chr6:1067973... 132 3e-31
Medtr5g030070.1 | tetraspanin family protein | HC | chr5:1263909... 132 3e-31
Medtr4g112570.1 | tetraspanin family protein | HC | chr4:4599853... 127 1e-29
Medtr1g095530.1 | tetraspanin family protein | HC | chr1:4297016... 127 1e-29
Medtr5g097460.1 | tetraspanin family protein | HC | chr5:4268548... 117 1e-26
Medtr2g056130.1 | tetraspanin family protein | HC | chr2:2406959... 112 3e-25
Medtr8g097280.1 | tetraspanin family protein | HC | chr8:4074964... 109 3e-24
Medtr5g097450.1 | tetraspanin, putative | LC | chr5:42682881-426... 97 2e-20
Medtr8g097250.1 | tetraspanin, putative | LC | chr8:40733412-407... 50 2e-06
>Medtr4g129670.1 | tetraspanin family protein | HC |
chr4:54041164-54038606 | 20130731
Length = 266
Score = 274 bits (701), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 132/242 (54%), Positives = 157/242 (64%)
Query: 25 VTGVWLSKQPGTDCERWLERPIIXXXXXXXXXXXXXXXXXCCRVSXXXXXXXXXXXXXXX 84
+TG+WL KQ ++CER+LE+PII CCRV+
Sbjct: 24 LTGIWLHKQATSECERFLEKPIIILGVFLLIVSLMGFIGGCCRVTWLLWFYLFFMFLLIV 83
Query: 85 XXXXXXXXXXXXXNKGAGEALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSCLGSGKL 144
NKGAGE+LS +GY+EYRLGDYSNWLQKRVN GNWNRI+SCL SGKL
Sbjct: 84 VLFVFTIFAFVVTNKGAGESLSNKGYKEYRLGDYSNWLQKRVNDNGNWNRIKSCLQSGKL 143
Query: 145 CSEFRNRFVNDTAEQFYAENLSALQSGCCKPSNDCGFTYQGPSVWNKTEGVNYSNPDCHA 204
C +F ++F+NDTA++FY ++L+ALQSGCCKPSNDCGFTYQ P+ W G Y+NPDC
Sbjct: 144 CIDFHSQFLNDTADKFYLQHLNALQSGCCKPSNDCGFTYQNPTNWTMPAGGTYTNPDCDT 203
Query: 205 WDNDPNVLCFNCQSCKAGLLQNIKTDWKKXXXXXXXXXXXXXXXYSIGCCAFRNNRNDNW 264
W NDP VLCFNC+SCKAGLL N+KT+WKK YSIGCCAFRNNR D W
Sbjct: 204 WTNDPKVLCFNCKSCKAGLLDNLKTNWKKVAVVNIIFLIFLIIVYSIGCCAFRNNRRDGW 263
Query: 265 KR 266
KR
Sbjct: 264 KR 265
>Medtr4g061010.1 | tetraspanin family protein | HC |
chr4:22449429-22444525 | 20130731
Length = 285
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 116/237 (48%), Gaps = 3/237 (1%)
Query: 27 GVWLSKQPG-TDCERWLERPIIXXXXXXXXXXXXXXXXXCCRVSXXXXXXXXXXXXXXXX 85
G+WLS + TDC ++L+ P+I C R +
Sbjct: 26 GIWLSSRANNTDCLKFLQWPLIIIGVSIMVVSLAGFAGACYRNTFLLRFYLVVMFFVIGV 85
Query: 86 XXXXXXXXXXXXNKGAGEALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSCLGSGKLC 145
+KG+G + RGY +Y L DYS WL++RV S W +I SC+ K C
Sbjct: 86 LIGFIIFAYVVTDKGSGRRVMNRGYLDYYLEDYSGWLEERVASDEYWGKISSCIRDSKAC 145
Query: 146 SEFRNRF--VNDTAEQFYAENLSALQSGCCKPSNDCGFTYQGPSVWNKTEGVNYSNPDCH 203
+ F V +TA+ F+ L+ +QSGCCKP DCG+ YQ +VW + G+ +NPDC+
Sbjct: 146 RKLARNFNDVPETADMFFERKLNPIQSGCCKPPTDCGYLYQNETVWIQGAGLVGTNPDCN 205
Query: 204 AWDNDPNVLCFNCQSCKAGLLQNIKTDWKKXXXXXXXXXXXXXXXYSIGCCAFRNNR 260
W+ND LC++C SCKAG+L ++K W+K Y + A+RNN+
Sbjct: 206 KWNNDQQQLCYDCDSCKAGVLGSLKKSWRKVSVINIVVMIILVIVYIVAYYAYRNNK 262
>Medtr8g066790.1 | tetraspanin family protein | HC |
chr8:27777981-27780805 | 20130731
Length = 269
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 105/241 (43%), Gaps = 3/241 (1%)
Query: 26 TGVWLSKQPGTDCERWLERPIIXXXXXXXXXXXXXXXXXCCRVSXXXXXXXXXXXXXXXX 85
G+WLS C + L+ P+I R+
Sbjct: 25 AGIWLSTLQAESCVKILQWPVIILGILILIVGMVGFIGAFWRIPMLLIFYLIAMIVLIVL 84
Query: 86 XXXXXXXXXXXXNKGAGEALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSCLGSGKLC 145
+G G R Y EYR+ D+S WL++RV S+ W+ I+SCL S +C
Sbjct: 85 LGSLVIFVYSVTLRGHGNIEPNRSYLEYRVDDFSFWLRRRVRSSHKWDGIKSCLSSSNMC 144
Query: 146 SEFRNRFVNDTAEQFYAENLSALQSGCCKPSNDCGFTYQGPSVWNKTEGVNYSNPDCHAW 205
+E + A+ F+ +LS LQSGCCKP CG+T+ P+ W N + DC W
Sbjct: 145 AELNQSY--RIAQDFFNAHLSPLQSGCCKPPTKCGYTFVNPTYWISPINTN-EDMDCMKW 201
Query: 206 DNDPNVLCFNCQSCKAGLLQNIKTDWKKXXXXXXXXXXXXXXXYSIGCCAFRNNRNDNWK 265
N+ LC+NC SCKAGLL I+ +W+K Y GC AFRN + +
Sbjct: 202 SNEQTQLCYNCDSCKAGLLATIRIEWRKANVILIVTLIGLILVYLFGCFAFRNAKTEELF 261
Query: 266 R 266
R
Sbjct: 262 R 262
>Medtr8g101600.1 | tetraspanin family protein | HC |
chr8:42704090-42701405 | 20130731
Length = 269
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 98/161 (60%), Gaps = 5/161 (3%)
Query: 104 ALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSCLGSGKLCSEFRNRFVNDTAEQFYAE 163
+ RGY+E+RL +S+WL+ RV +G+W +I CL + +C + ++ TA+QF+
Sbjct: 103 VVPDRGYKEFRLDGFSSWLRHRVTGSGSWRKIMPCLAASDVCIKLTQNYI--TADQFFNS 160
Query: 164 NLSALQSGCCKPSNDCGFTYQGPSVWNKTEGVN-YSNPDCHAWDNDPNVLCFNCQSCKAG 222
++S LQSGCCKP CG++Y P +W T VN ++ DC+ W+ND N LC+NC +CKAG
Sbjct: 161 HISPLQSGCCKPPTVCGYSYVSPIMW--TNPVNPMADSDCNLWNNDQNQLCYNCNACKAG 218
Query: 223 LLQNIKTDWKKXXXXXXXXXXXXXXXYSIGCCAFRNNRNDN 263
LL N++ +W+K Y I C AF+N + ++
Sbjct: 219 LLGNLRKEWRKANIILIVAVVVLIWVYVIACSAFKNAQTED 259
>Medtr6g033335.1 | tetraspanin family protein | HC |
chr6:10679732-10677453 | 20130731
Length = 283
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 106/234 (45%), Gaps = 13/234 (5%)
Query: 27 GVWLSKQPGTDCERWLERPIIXXXXXXXXXXXXXXXXXCCRVSXXXXXXXXXXXXXXXXX 86
G+W+S+ T CE + + P++ C V+
Sbjct: 27 GLWISRST-TACENFFQEPLLIIGFIVLVISLVGFIGACFHVAWALWVYLVVMLLLIGTI 85
Query: 87 XXXXXXXXXXXNKGAGEALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSCLGSGKLCS 146
+G G + GR Y EY L +YS WL+KR+ W+ I+SC+ CS
Sbjct: 86 IGLTIFGFVVTTQGGGVEVPGRTYMEYHLQNYSPWLKKRIKDHQYWSTIKSCIMGSNTCS 145
Query: 147 EFRNRFVNDTAEQFYAENLSALQSGCCKPSNDCGFTYQGPSVWNKTEGVNYSNPDCHAWD 206
+ + T+ + +LS +QSGCCKP C F N + + DC+ W+
Sbjct: 146 ----KLASWTSLDYMQRDLSPIQSGCCKPPTTCNF--------NMETTLVDQDIDCYRWN 193
Query: 207 NDPNVLCFNCQSCKAGLLQNIKTDWKKXXXXXXXXXXXXXXXYSIGCCAFRNNR 260
N PN+LC++C SCKAG+L+NI+TDW K YSIGCCAFRN R
Sbjct: 194 NAPNLLCYDCDSCKAGVLENIRTDWHKVSVLSVVILVFLIGIYSIGCCAFRNAR 247
>Medtr5g030070.1 | tetraspanin family protein | HC |
chr5:12639094-12641293 | 20130731
Length = 269
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 109/241 (45%), Gaps = 3/241 (1%)
Query: 26 TGVWLSKQPGTDCERWLERPIIXXXXXXXXXXXXXXXXXCCRVSXXXXXXXXXXXXXXXX 85
G+WL+ +P C ++L+ P+I R+S
Sbjct: 25 AGIWLTNEPADTCVKFLQWPVIILGVLLLVVSLAGLIGSFWRISCLLIFYLVAMLVLIIL 84
Query: 86 XXXXXXXXXXXXNKGAGEALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSCLGSGKLC 145
+G G R Y EYRL D+S +L++RV S+ W+ IRSCL +C
Sbjct: 85 LVCLVIFVYMVTLRGHGMIEPNRAYLEYRLDDFSGFLKRRVRSSFKWDAIRSCLSQTNMC 144
Query: 146 SEFRNRFVNDTAEQFYAENLSALQSGCCKPSNDCGFTYQGPSVWNKTEGVNYSNPDCHAW 205
E F A+ F+ L+ +QSGCCKP C +T+ P+ W N ++ DC W
Sbjct: 145 GELNQSF--RMAQDFFNARLTPMQSGCCKPPTQCAYTFVNPTYWISPIN-NAADMDCLQW 201
Query: 206 DNDPNVLCFNCQSCKAGLLQNIKTDWKKXXXXXXXXXXXXXXXYSIGCCAFRNNRNDNWK 265
ND LC+NC SCKAGLL N++ +WK+ Y IGC AFRN + ++
Sbjct: 202 SNDQTTLCYNCDSCKAGLLANLRKEWKRANVILIITVVVLIVVYLIGCFAFRNAKTEDLF 261
Query: 266 R 266
R
Sbjct: 262 R 262
>Medtr4g112570.1 | tetraspanin family protein | HC |
chr4:45998533-45999649 | 20130731
Length = 270
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 111/238 (46%), Gaps = 6/238 (2%)
Query: 29 WLSKQPGTDCERWLERPIIXXXXXXXXXXXXXXXXXCCRVSXXXXXXXXXXXXXXXXXXX 88
++ + G+DC++ L+ P++ ++
Sbjct: 31 YIHIKGGSDCQKVLQYPLLIGGVFVVIVSGLGIAGSLFGINTALYGYLLVTFLLVLGLAF 90
Query: 89 XXXXXXXXXNKGAGEALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSCLGSGKLCSEF 148
N+G G+ +SG+GY EYR+ D+S+WLQ+ V + NW+ +SCL +C
Sbjct: 91 FTVFALFVTNRGVGKQISGKGYGEYRVADFSHWLQRYVVNEENWDEFKSCLKDAHVC--- 147
Query: 149 RNRFVND--TAEQFYAENLSALQSGCCKPSNDCGFTYQGPSVWNKTE-GVNYSNPDCHAW 205
+N VN + ++LS Q+GCCKP CGFT + + W + G+ +N DC W
Sbjct: 148 QNLAVNGGRNNDSLIFKHLSTTQAGCCKPPVYCGFTMKNATFWEVPKSGLAANNSDCATW 207
Query: 206 DNDPNVLCFNCQSCKAGLLQNIKTDWKKXXXXXXXXXXXXXXXYSIGCCAFRNNRNDN 263
+N LC++C +CK G+L NI+ W+ Y++GC A RNNR D+
Sbjct: 208 NNRQEKLCYDCNACKGGVLANIRNQWRHLTVFNGFVLVLVTAIYAMGCYAIRNNRLDS 265
>Medtr1g095530.1 | tetraspanin family protein | HC |
chr1:42970165-42968109 | 20130731
Length = 283
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 104/234 (44%), Gaps = 13/234 (5%)
Query: 27 GVWLSKQPGTDCERWLERPIIXXXXXXXXXXXXXXXXXCCRVSXXXXXXXXXXXXXXXXX 86
G+W+++ T C +L+ P++ C V+
Sbjct: 27 GLWMARS-STTCANFLQTPLLVIGFIVLVISLAGFIGACFHVACALWLYLVIMLLLIVAL 85
Query: 87 XXXXXXXXXXXNKGAGEALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSCLGSGKLCS 146
+KG G + GR Y EY L DYS WL+KR+ WN I++C+ K C
Sbjct: 86 LGLTIFGFGVTSKGGGVEVPGRSYSEYHLTDYSPWLKKRIQDPRYWNTIKNCILGSKTC- 144
Query: 147 EFRNRFVNDTAEQFYAENLSALQSGCCKPSNDCGFTYQGPSVWNKTEGVNYSNPDCHAWD 206
++ + T + ++S +QSGCCKP C + N + + DC+ W
Sbjct: 145 ---DKLASWTPLDYMQNDMSPIQSGCCKPPTACNY--------NMEAVMMTQDSDCYKWS 193
Query: 207 NDPNVLCFNCQSCKAGLLQNIKTDWKKXXXXXXXXXXXXXXXYSIGCCAFRNNR 260
N+P +LC+ C SCKAG+L++I+ +W K YSIGCCAFRN R
Sbjct: 194 NEPTLLCYECDSCKAGVLEDIRRNWHKLSVLTVTMLILLIGIYSIGCCAFRNAR 247
>Medtr5g097460.1 | tetraspanin family protein | HC |
chr5:42685481-42687089 | 20130731
Length = 318
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 77/111 (69%), Gaps = 6/111 (5%)
Query: 121 WLQKRVNSTGNWNRIRSCLGSGKLC-SEFRNRFVNDTAEQFYAENLSALQSGCCKPSNDC 179
W+Q++VN+ +WNRI+SCL + C SE RN F + YA++ S +Q+ CCKPS+DC
Sbjct: 150 WMQEKVNNNYSWNRIKSCLQPQQFCGSENRNDF-----RKSYADHFSPIQNSCCKPSSDC 204
Query: 180 GFTYQGPSVWNKTEGVNYSNPDCHAWDNDPNVLCFNCQSCKAGLLQNIKTD 230
GFTY + W K E V Y+NPDC AW N+PN+ CF+CQ CK +++ +K+D
Sbjct: 205 GFTYLNSTTWTKPENVTYTNPDCDAWKNNPNISCFDCQCCKDDVVKLMKSD 255
>Medtr2g056130.1 | tetraspanin family protein | HC |
chr2:24069593-24068098 | 20130731
Length = 258
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 93/228 (40%), Gaps = 17/228 (7%)
Query: 36 TDCERWLERPIIXXXXXXXXXXXXXXXXXCCRVSXXXXXXXXXXXXXXXXXXXXXXXXXX 95
TDC + L P++ R++
Sbjct: 35 TDCLKVLMYPLLFGAFFVFVVSVLGIMGSMFRINEALYAYLLATFFVILAFMLFTVFALF 94
Query: 96 XXNKGAGEALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSCLGSGKLCSEFRNRFVND 155
NK G+ +S +G+ EY++ D+S WLQ+ V + NWN I+SCL LC
Sbjct: 95 VTNKVVGQKVSDKGFGEYKVADFSLWLQQYVINDKNWNDIKSCLLGVGLCQ--------- 145
Query: 156 TAEQFYAENLSALQSGCCKPSNDCGFTYQGPSVWNKTE-GVNYSNPDCHAWDNDPNVLCF 214
NLSA GCCKP CGFT + + W + G ++ DC W N N LC+
Sbjct: 146 -------RNLSAAGVGCCKPPVQCGFTMKNATFWEVPKTGPAMNDTDCFTWKNKENKLCY 198
Query: 215 NCQSCKAGLLQNIKTDWKKXXXXXXXXXXXXXXXYSIGCCAFRNNRND 262
+C SCK +L NI+ W+ Y +GC A RNNR +
Sbjct: 199 DCNSCKGEVLANIRNQWRYLTIFNVCVLILLTSIYVLGCYAIRNNRRN 246
>Medtr8g097280.1 | tetraspanin family protein | HC |
chr8:40749643-40746704 | 20130731
Length = 294
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 3/208 (1%)
Query: 25 VTGVWLSKQPGTDCERWLERPIIXXXXXXXXXXXXXXXXXCCRVSXXXXXXXXXXXXXXX 84
+ GVW+S +P C + L P++ R S
Sbjct: 26 IFGVWMSTRPDA-CRKSLTIPVLSIGAVIFLISIVGFLGAMKRSSMLLWVYLIMLFFILV 84
Query: 85 XXXXXXXXXXXXXNKGAGEALSGRGYREYRLGDYSNWLQKRVNSTGNWNRIRSCLGSGKL 144
N G+G +++G Y+EY+L DYS+W K +N++ NW R+R+CL +
Sbjct: 85 GILVFTVLVFIVTNNGSGHSVTGLRYKEYQLQDYSSWFLKELNNSHNWKRLRACLVKTED 144
Query: 145 CSEFRNRFVNDTAEQFYAENLSALQSGCCKPSNDCGFTYQGPSVWNKTEGVNYSNPDCHA 204
C+ R+ T +Q+ L+ +++GCC+P ++CG+ S ++ T N DC
Sbjct: 145 CNNLSKRY--KTPKQYKLAKLTPIEAGCCRPPSECGYPAVNASYYDLTFQPVSPNHDCKR 202
Query: 205 WDNDPNVLCFNCQSCKAGLLQNIKTDWK 232
+ N V C++C SCKAG+ Q +K +W+
Sbjct: 203 YKNSRAVKCYDCDSCKAGVAQYMKIEWR 230
>Medtr5g097450.1 | tetraspanin, putative | LC |
chr5:42682881-42683645 | 20130731
Length = 206
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 60/111 (54%), Gaps = 17/111 (15%)
Query: 121 WLQKRVNSTGNWNRIRSCLGSGKLCSEFRNRFVNDTAEQFYAENLSALQSGCCKPSNDCG 180
WLQK+VN+ NW +SCL CS+ + ND +FY EN S +Q CCK N
Sbjct: 86 WLQKKVNNNNNWYAFKSCLQPQNFCSDLHSETPNDFFRKFYTENFSPIQYRCCKIRN--- 142
Query: 181 FTYQGPSVWNKTEGVNYSNPDCHAWDNDPNVLCFNCQSCKAGLLQNIKTDW 231
+ Y+NPDC W NDPN+ CF+CQSCKA LL I +DW
Sbjct: 143 --------------ITYTNPDCDFWSNDPNISCFDCQSCKADLLHVINSDW 179
>Medtr8g097250.1 | tetraspanin, putative | LC |
chr8:40733412-40732335 | 20130731
Length = 123
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 126 VNSTGNWNRIRSCLGSGKLCSEFRNRFVNDTAEQFYAENLSALQSGCCKPSNDCGFTYQG 185
+N++ N ++R CL + C+ R+ +T +Q+ L+ ++GCC+P ++CG+
Sbjct: 34 LNNSHNLKQLRVCLVKTEDCNNISKRY--ETPKQYKLAKLTPTEAGCCQPPSECGYPAVN 91
Query: 186 PSVWNKTEGVNYSNPDCHAWDNDPNVLCFNCQ 217
S ++ T N DC + N N + C+
Sbjct: 92 ASYYDLTFHPVSPNHDCKRYKNSQNAIIVTCK 123