Miyakogusa Predicted Gene

Lj6g3v1018300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v1018300.1 Non Characterized Hit- tr|C5XMA3|C5XMA3_SORBI
Putative uncharacterized protein Sb03g023720
OS=Sorghu,51.95,0.00000000000005,seg,NULL; IGR,IGR protein
motif,CUFF.58766.1
         (109 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g023920.2 | IGR motif protein | HC | chr2:8486429-8491409 ...   148   9e-37
Medtr2g023920.3 | IGR motif protein | HC | chr2:8486972-8491409 ...   148   9e-37
Medtr2g023920.1 | IGR motif protein | HC | chr2:8486429-8491409 ...   148   9e-37

>Medtr2g023920.2 | IGR motif protein | HC | chr2:8486429-8491409 |
           20130731
          Length = 118

 Score =  148 bits (374), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 76/113 (67%), Positives = 84/113 (74%), Gaps = 6/113 (5%)

Query: 3   WLQ--RSFNRGAFPVSTQSPCFSRFFSK----SSSPYVVKVGIPEFLNGIGKGVESHVAK 56
           WLQ  R    G+  + +  P  S +FS      S+PYVVKVGIPEFLNGIGKGVESHVAK
Sbjct: 6   WLQMHRVIRNGSVNLISTHPHSSAYFSSRSYSKSTPYVVKVGIPEFLNGIGKGVESHVAK 65

Query: 57  LETEIGDFQSLLVTRTXXXXXXGIPCKHRKLILKHTHKYRLGLWRPRAEAIKS 109
           L++EIGDFQ LLVTRT      GIPCKHRKLILKH HKYRLGLWRPRAE IK+
Sbjct: 66  LDSEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKHAHKYRLGLWRPRAEPIKA 118


>Medtr2g023920.3 | IGR motif protein | HC | chr2:8486972-8491409 |
           20130731
          Length = 118

 Score =  148 bits (374), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 76/113 (67%), Positives = 84/113 (74%), Gaps = 6/113 (5%)

Query: 3   WLQ--RSFNRGAFPVSTQSPCFSRFFSK----SSSPYVVKVGIPEFLNGIGKGVESHVAK 56
           WLQ  R    G+  + +  P  S +FS      S+PYVVKVGIPEFLNGIGKGVESHVAK
Sbjct: 6   WLQMHRVIRNGSVNLISTHPHSSAYFSSRSYSKSTPYVVKVGIPEFLNGIGKGVESHVAK 65

Query: 57  LETEIGDFQSLLVTRTXXXXXXGIPCKHRKLILKHTHKYRLGLWRPRAEAIKS 109
           L++EIGDFQ LLVTRT      GIPCKHRKLILKH HKYRLGLWRPRAE IK+
Sbjct: 66  LDSEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKHAHKYRLGLWRPRAEPIKA 118


>Medtr2g023920.1 | IGR motif protein | HC | chr2:8486429-8491409 |
           20130731
          Length = 118

 Score =  148 bits (374), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 76/113 (67%), Positives = 84/113 (74%), Gaps = 6/113 (5%)

Query: 3   WLQ--RSFNRGAFPVSTQSPCFSRFFSK----SSSPYVVKVGIPEFLNGIGKGVESHVAK 56
           WLQ  R    G+  + +  P  S +FS      S+PYVVKVGIPEFLNGIGKGVESHVAK
Sbjct: 6   WLQMHRVIRNGSVNLISTHPHSSAYFSSRSYSKSTPYVVKVGIPEFLNGIGKGVESHVAK 65

Query: 57  LETEIGDFQSLLVTRTXXXXXXGIPCKHRKLILKHTHKYRLGLWRPRAEAIKS 109
           L++EIGDFQ LLVTRT      GIPCKHRKLILKH HKYRLGLWRPRAE IK+
Sbjct: 66  LDSEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKHAHKYRLGLWRPRAEPIKA 118