Miyakogusa Predicted Gene

Lj6g3v0962620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0962620.1 Non Characterized Hit- tr|I1KMI7|I1KMI7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57492
PE,91.43,0,CGI-141-RELATED/LIPASE CONTAINING PROTEIN,NULL; seg,NULL;
Got1,Vesicle transport protein, Got1/SFT2-,CUFF.58735.1
         (140 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g089500.1 | Got1/SFT2-like vescicle transporter family pro...   205   9e-54
Medtr0180s0070.1 | Got1/SFT2-like vescicle transporter family pr...   190   3e-49
Medtr7g006340.1 | Got1/SFT2-like vescicle transporter family pro...    92   1e-19

>Medtr5g089500.1 | Got1/SFT2-like vescicle transporter family
           protein | HC | chr5:38892943-38897342 | 20130731
          Length = 140

 Score =  205 bits (522), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 105/140 (75%), Positives = 115/140 (82%)

Query: 1   MVSFEMNDRKKIXXXXXXXXXXXXXXXXXXXXDKGLLAMGNILFISGVSVTIGLKSTMQF 60
           M+SFEMNDRKKI                    DKGLLAMGN+LF+SGVS+TIGLKSTMQF
Sbjct: 1   MLSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNVLFVSGVSLTIGLKSTMQF 60

Query: 61  FMKPSNFKGTISFGIGFLILIMGWPILGMIGESYGFIVLFSGFWPTVAVFLQKIPVLGWL 120
           FMK SNFKGTISFGIGFLILI+GWPILGMI E+YGFIVLFSGFWPT+AVFLQKIPVLGW+
Sbjct: 61  FMKRSNFKGTISFGIGFLILILGWPILGMIIEAYGFIVLFSGFWPTLAVFLQKIPVLGWV 120

Query: 121 FQQPYVRSLLDRYRGKRVPV 140
            QQP++RS  DRYRGKRVPV
Sbjct: 121 IQQPFIRSFFDRYRGKRVPV 140


>Medtr0180s0070.1 | Got1/SFT2-like vescicle transporter family
           protein | HC | scaffold0180:22369-20759 | 20130731
          Length = 135

 Score =  190 bits (483), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 93/108 (86%), Positives = 103/108 (95%)

Query: 33  DKGLLAMGNILFISGVSVTIGLKSTMQFFMKPSNFKGTISFGIGFLILIMGWPILGMIGE 92
           DKGLLAMGNILF+SGVS+TIGLKSTMQFFMK SNFKGT+SFGIGFLILI+GWPILGMI E
Sbjct: 28  DKGLLAMGNILFVSGVSLTIGLKSTMQFFMKRSNFKGTVSFGIGFLILILGWPILGMIVE 87

Query: 93  SYGFIVLFSGFWPTVAVFLQKIPVLGWLFQQPYVRSLLDRYRGKRVPV 140
           SYGF+VLFSGFWPT++VFLQKIPVLGW  QQPY+RSL +RYRG+RVPV
Sbjct: 88  SYGFLVLFSGFWPTLSVFLQKIPVLGWFVQQPYIRSLFERYRGRRVPV 135


>Medtr7g006340.1 | Got1/SFT2-like vescicle transporter family
           protein | HC | chr7:658220-653857 | 20130731
          Length = 126

 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/90 (47%), Positives = 64/90 (71%)

Query: 33  DKGLLAMGNILFISGVSVTIGLKSTMQFFMKPSNFKGTISFGIGFLILIMGWPILGMIGE 92
           D+GLLA+GNI +++GV++ +G +S    F   +N+KGT SF +G   + + WPI+G+I E
Sbjct: 32  DRGLLALGNIFWLAGVAILLGWRSMWSLFTSRANYKGTASFLLGLFFIFVRWPIVGIILE 91

Query: 93  SYGFIVLFSGFWPTVAVFLQKIPVLGWLFQ 122
            YG + LFSGFW +V VFL  IPV+GW+ +
Sbjct: 92  IYGCVFLFSGFWSSVKVFLYHIPVVGWVIR 121