Miyakogusa Predicted Gene

Lj6g3v0959410.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0959410.1 Non Characterized Hit- tr|I1JIX9|I1JIX9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.43088 PE,56.64,0,FAMILY
NOT NAMED,NULL; put_zinc_LRP1: putative zinc finger domain, LRP1
t,Zinc finger, lateral root ,CUFF.58723.1
         (390 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g089750.1 | lateral root primordium (LRP)-like protein | H...   288   6e-78
Medtr3g014660.1 | LRP1 carboxy-terminal domain protein | HC | ch...   191   1e-48
Medtr8g039110.1 | LRP1 carboxy-terminal domain protein | HC | ch...   187   1e-47
Medtr8g076620.1 | zinc finger, LRP1 type protein | HC | chr8:324...   145   1e-34
Medtr5g021130.1 | transcription factor, putative | HC | chr5:810...   129   4e-30
Medtr3g112510.1 | transcription factor, putative | LC | chr3:527...   123   2e-28
Medtr4g071110.1 | zinc finger, LRP1 type protein | LC | chr4:267...   105   7e-23
Medtr0363s0040.1 | zinc finger, LRP1 type protein, putative | HC...   101   1e-21
Medtr1g023230.1 | zinc finger, LRP1 type protein | HC | chr1:741...    91   3e-18
Medtr0105s0070.1 | zinc finger, LRP1 type protein, putative | HC...    62   9e-10

>Medtr5g089750.1 | lateral root primordium (LRP)-like protein | HC |
           chr5:39020566-39017917 | 20130731
          Length = 467

 Score =  288 bits (737), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 188/375 (50%), Positives = 222/375 (59%), Gaps = 48/375 (12%)

Query: 15  SVVATTRRLPSDSGGAFADWXXXXXXXXXXXXIPGHASDLSLGFNAASAGMWPGASSARP 74
           + VATTRRLPSDSG AFADW                  DLSLGFNAA      G S+  P
Sbjct: 54  TFVATTRRLPSDSG-AFADWAPTNSSTTLRAA--AAPEDLSLGFNAAPTAGNAGPSTG-P 109

Query: 75  ISYSHVASDMVGL---RDVFLVAPAS-----SFNHHSESLMPDPHLNSSNNPVTALGVGM 126
            +  + +S  +       +F+VAP+S       N+H E+LM DPH   S NP TALGVG+
Sbjct: 110 TTGLYNSSRSINYGPEMGMFVVAPSSFHHHHHNNNHHEALMSDPH---SLNPATALGVGV 166

Query: 127 IPLLGG-----------------GIQLWHDXXXXXXHEQN----YLKKH-ALVEHDNXXX 164
           IPLL                   GIQ WH+       +Q+    YLKK    ++H N   
Sbjct: 167 IPLLTASPCLENENMLNSRRNQQGIQFWHEQHHQQQQQQSPHSHYLKKQQGFLDHHNTSP 226

Query: 165 XXXX----ITALVATSGGGTATCQDCGNQAKKDCGHRRCRSCCKSRGFDCPTHVKSTWVP 220
                   +TA   +SGGGT TCQDCGNQAKKDC +RRCR+CCKSRGFDCPTHVKSTWVP
Sbjct: 227 TNLVHGGGLTASGTSSGGGTTTCQDCGNQAKKDCSNRRCRTCCKSRGFDCPTHVKSTWVP 286

Query: 221 AARRRER--QVMAERXXXXXXXXXXXXXXKKPRLVASQXXXXXXXXXXXXXXXXPPRSFE 278
           AARRRER                      KKPRL+ASQ                PPRSF+
Sbjct: 287 AARRRERLSSTATTTVVAGGGSSGSTSGAKKPRLIASQTTSHTSTSNTT-----PPRSFD 341

Query: 279 TSSSHQDVSFKESLPRQVRAPAVFKCVRVTAVDGGEDEFAYQAMVKIGGHLFKGLLYNQG 338
           T+SSHQD  FK+S+P QVRAPAVFKCVRVT+VD G+DE+AYQA+VKIGGH+FKG LY+ G
Sbjct: 342 TTSSHQDAGFKDSMPGQVRAPAVFKCVRVTSVDDGKDEYAYQAVVKIGGHVFKGFLYDHG 401

Query: 339 VENRDGYPDLSELHL 353
           VENR+ YP+LSELHL
Sbjct: 402 VENREVYPNLSELHL 416


>Medtr3g014660.1 | LRP1 carboxy-terminal domain protein | HC |
           chr3:4203654-4198130 | 20130731
          Length = 329

 Score =  191 bits (485), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/316 (37%), Positives = 157/316 (49%), Gaps = 39/316 (12%)

Query: 84  MVGLRDVFLVAPASS---------FNHHSESLMPDPHLNSSNNPV-----TALGVGMIPL 129
           M+GLRD+ L+AP+ S          N +     P  H ++SN+ +      ++G G+ PL
Sbjct: 3   MLGLRDLVLIAPSPSSLQHHHQQNQNQNQNQNQPISHDHNSNHSLPSSASLSVGFGIFPL 62

Query: 130 LGGGIQLWHDXXXXXXHEQ------------------NYLKKHALVEHDNXXXXXXXITA 171
           L     +          ++                  N  KK  + E +N        + 
Sbjct: 63  LTATPCMPQQQSQNNEVQENPSNNNNFWNLRMCPEVVNLPKKGVITEEENHGKIAMMESE 122

Query: 172 LVATSGGGTATCQDCGNQAKKDCGHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQVMA 231
                G     CQDCGN+AKKDC  RRCR+CCK RG+DC TH+KSTW+P+ RRRER+V  
Sbjct: 123 ENGVYGSEYRVCQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRREREV-- 180

Query: 232 ERXXXXXXXXXXXXXXKKPRLVASQXXXXXXXXXXXXXXXXPPRSFETSSSHQDVSFKES 291
           E               ++  L+ S                 P +SF TSS HQD  FKE 
Sbjct: 181 EMFAGGGDGEGCSGVKRQKGLLGSSQNAAATSHSSNSNGTTP-KSFATSSCHQDAGFKEG 239

Query: 292 LPRQVRAPAVFKCVRVTAVDGGEDEFAYQAMVKIGGHLFKGLLYNQGVENRDGYPDLSEL 351
           LP  V APAVF+C RVTA+  GEDEFAY A V I GH+FKG LY+ GV+ ++  P +SEL
Sbjct: 240 LPGHVNAPAVFRCHRVTAIGNGEDEFAYLATVHISGHVFKGFLYDHGVDGKNPMPCVSEL 299

Query: 352 HLG----GRNGVSSSS 363
            LG    G+NG  SS+
Sbjct: 300 QLGNNCSGKNGECSSA 315


>Medtr8g039110.1 | LRP1 carboxy-terminal domain protein | HC |
           chr8:14512197-14513962 | 20130731
          Length = 327

 Score =  187 bits (476), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/299 (36%), Positives = 153/299 (51%), Gaps = 28/299 (9%)

Query: 83  DMVGLRDVFLVA--PASSFNHHSESLMPD--PHLNSSNNPVTALGVGMIPLLGGGI---- 134
           +M+GLRD+ L+A  P+S  N  ++++  D  P+L   ++   ++G+G+ PLL        
Sbjct: 2   NMLGLRDLVLIAQTPSSLHNQQNQTISSDHNPNLPLPSSSALSVGLGIFPLLTTTHPHHQ 61

Query: 135 ---------------QLWHDXXXXXXHEQNYLKKHALVEHDNXXXXXXXITALVATSGGG 179
                            W+                  VE ++       +  +     G 
Sbjct: 62  NPNNNNNNDNIHQDSNFWNLKMCQPQQVMMMNSSRKRVEEEDDDVRNKNL-MMGCEENGE 120

Query: 180 TATCQDCGNQAKKDCGHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQVMAERXXXXXX 239
              CQDCGN+AKKDC ++RCR+CCK RGFDC THVKSTW+PA+ RR+R ++         
Sbjct: 121 FRVCQDCGNRAKKDCSYKRCRTCCKGRGFDCSTHVKSTWIPASMRRDRSMVVAEGGDSDG 180

Query: 240 XXXXXXXXKKPRLVASQXXXXXXXXXXXXXXXXPPRSFE---TSSSHQDVSFKESLPRQV 296
                   +K  + +SQ                  RS     TSS HQD  FK++LPR V
Sbjct: 181 GASSGTKRQKILMTSSQNNVAANSHSSSSNAATRTRSLSLDITSSCHQDPGFKQTLPRYV 240

Query: 297 RAPAVFKCVRVTAVDGGEDEFAYQAMVKIGGHLFKGLLYNQGVENR-DGYPDLSELHLG 354
           RAPAVFKC RV+A+  GEDE AY A V I GH+FKG LY+QGV+++ +  P +SEL LG
Sbjct: 241 RAPAVFKCHRVSAIGNGEDELAYLATVNISGHVFKGFLYDQGVDDKNETMPCVSELQLG 299


>Medtr8g076620.1 | zinc finger, LRP1 type protein | HC |
           chr8:32482156-32484876 | 20130731
          Length = 331

 Score =  145 bits (365), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/188 (42%), Positives = 101/188 (53%), Gaps = 36/188 (19%)

Query: 158 EHDNXXXXXXXITALVATSGGGTATCQDCGNQAKKDCGHRRCRSCCKSRGFDCPTHVKST 217
           EH +         A+ ++S     +CQDCGNQAKKDC H RCR+CCKSRGF C THVKST
Sbjct: 96  EHQSSSRSAAFTMAMRSSSSAEGISCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKST 155

Query: 218 WVPAARRRERQVMAERXXXXXXXXXXXXXXKKPR-----LVASQXXXXXXXXXXXXXXXX 272
           WVPA+RRRERQ                   K+PR     LV++                 
Sbjct: 156 WVPASRRRERQ------QQLSSSPLQRDISKRPRDGSNALVST----------------- 192

Query: 273 PPRSFETSSSHQDVSFKESLPRQVRAPAVFKCVRVTAVDGGEDEFAYQAMVKIGGHLFKG 332
             R+F T         + + P  V +PA F+CVRV+++D  +D +AYQ  V IGGHLFKG
Sbjct: 193 --RNFHTGLE------EANFPAVVSSPAEFRCVRVSSIDDADDRYAYQTAVNIGGHLFKG 244

Query: 333 LLYNQGVE 340
           +LY+ G E
Sbjct: 245 ILYDFGPE 252


>Medtr5g021130.1 | transcription factor, putative | HC |
           chr5:8100971-8103215 | 20130731
          Length = 323

 Score =  129 bits (325), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 72/163 (44%), Positives = 94/163 (57%), Gaps = 4/163 (2%)

Query: 176 SGGGTATCQDCGNQAKKDCGHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQVMAERXX 235
           SG G+ +CQDCGNQAKKDC H RCR+CCKSRGFDC THVKSTWVPAARRRERQ   ++  
Sbjct: 93  SGSGSISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPAARRRERQQQQQQQQ 152

Query: 236 XXXXXXXXXXXXKKPRLVASQXXXXXXXXXXXXXXXXPPRSFETSSSHQDVSFKESLPRQ 295
                         P+                        +  ++    +++F    P  
Sbjct: 153 LSAPKSFQQHGDIVPQNRHRDLNNNNSSLACTRLPTNRSLTLPSAGLLDEMNF----PAV 208

Query: 296 VRAPAVFKCVRVTAVDGGEDEFAYQAMVKIGGHLFKGLLYNQG 338
           V +PA F+CVRV++VD  E+E+AY   V IGGH+F+G+LY+ G
Sbjct: 209 VNSPAEFRCVRVSSVDENEEEYAYSTAVNIGGHVFRGILYDYG 251


>Medtr3g112510.1 | transcription factor, putative | LC |
           chr3:52767953-52766535 | 20130731
          Length = 294

 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 88/165 (53%), Gaps = 19/165 (11%)

Query: 179 GTATCQDCGNQAKKDCGHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQVMAERXXXXX 238
           G   CQDCGNQAKKDC H RCR+CCKSRGF C THVKSTWVPAA+RRERQ          
Sbjct: 82  GGMNCQDCGNQAKKDCIHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQ---------- 131

Query: 239 XXXXXXXXXKKPRLVASQXXXXXXXXXXXXXXXXPPRSFETSSSHQDVSFKESLPRQVRA 298
                    ++  +   +                PP         Q        P +V +
Sbjct: 132 QHLSALPFRRRDHVDNYKRHTEINQGATSLPFPQPPIPTTGLELGQ-------FPPEVSS 184

Query: 299 PAV-FKCVRVTAVDGGEDE-FAYQAMVKIGGHLFKGLLYNQGVEN 341
           P V F+CVRV+++DG + E  AYQ  V IGGH+FKG+LY+QG  N
Sbjct: 185 PGVTFRCVRVSSLDGPDHEQCAYQTAVNIGGHVFKGILYDQGPPN 229


>Medtr4g071110.1 | zinc finger, LRP1 type protein | LC |
           chr4:26795870-26794245 | 20130731
          Length = 264

 Score =  105 bits (262), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 75/156 (48%), Gaps = 35/156 (22%)

Query: 183 CQDCGNQAKKDCGHRRCRSCCKSRGFDCPTHVKSTWVPAARRRERQVMAERXXXXXXXXX 242
           CQDCGNQAKKDC + RCRSCCK++GF+C TH++STW+PA RRR R               
Sbjct: 17  CQDCGNQAKKDCAYSRCRSCCKNKGFNCHTHIRSTWIPADRRRHRM-------------- 62

Query: 243 XXXXXKKPRLVASQXXXXXXXXXXXXXXXXPPRSFETSSSHQDVSFKESLPRQVRAPAVF 302
                                           +   T SS  +  F    P    +    
Sbjct: 63  -----------------DHPSDQHHLHEHKRHKQINTISSSDEFKF----PAVTSSMTTL 101

Query: 303 KCVRVTAVDGGEDEFAYQAMVKIGGHLFKGLLYNQG 338
            CV+V ++D   +E AYQ  V+IGGH+F G+LY+QG
Sbjct: 102 TCVQVRSMDETVNETAYQTSVEIGGHVFSGILYDQG 137


>Medtr0363s0040.1 | zinc finger, LRP1 type protein, putative | HC |
           scaffold0363:17438-16319 | 20130731
          Length = 245

 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 25/174 (14%)

Query: 83  DMVGLRDVFLVA--PASSFNHHSESLMPD--PHLNSSNNPVTALGVGMIPLLGGGI---- 134
           +M+GLRD+ L+A  P+S  N  ++++  D  P+L   ++   ++G+G+ PLL        
Sbjct: 2   NMLGLRDLVLIAQTPSSLHNQQNQTISSDHNPNLPLPSSSALSVGLGIFPLLTTTHPHHQ 61

Query: 135 ---------------QLWHDXXXXXXHEQNYLKKHALVEHDNXXXXXXXITALVATSGGG 179
                            W+                  VE ++       +  +     G 
Sbjct: 62  NPNNNNNNDNIHQDSNFWNLKMCQPQQVMMMNSSRKRVEEEDDDVRNKNL-MMGCEENGE 120

Query: 180 TATCQDCGNQAKKDCGHRRCRSCCKSRGFDCPTHVKSTWVPAARRRER-QVMAE 232
              CQDCGN+AKKDC ++RCR+CCK RGFDC THVKSTW+PA+ RR+R  V+AE
Sbjct: 121 FRVCQDCGNRAKKDCSYKRCRTCCKGRGFDCSTHVKSTWIPASMRRDRSMVVAE 174


>Medtr1g023230.1 | zinc finger, LRP1 type protein | HC |
           chr1:7419015-7417436 | 20130731
          Length = 252

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 39/45 (86%), Positives = 41/45 (91%)

Query: 183 CQDCGNQAKKDCGHRRCRSCCKSRGFDCPTHVKSTWVPAARRRER 227
           CQDCGNQAKKDC H RCR+CCKSRGF C THVKSTWVPAA+RRER
Sbjct: 122 CQDCGNQAKKDCPHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRER 166


>Medtr0105s0070.1 | zinc finger, LRP1 type protein, putative | HC |
           scaffold0105:24983-22116 | 20130731
          Length = 86

 Score = 62.0 bits (149), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 22/33 (66%), Positives = 29/33 (87%)

Query: 185 DCGNQAKKDCGHRRCRSCCKSRGFDCPTHVKST 217
           DCGNQAKKDC + RCRSCCK++ F+C TH+K++
Sbjct: 44  DCGNQAKKDCAYSRCRSCCKNKDFNCHTHIKTS 76