Miyakogusa Predicted Gene
- Lj6g3v0933510.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0933510.1 tr|G7K6H0|G7K6H0_MEDTR E3 ubiquitin-protein
ligase synoviolin OS=Medicago truncatula
GN=MTR_5g007710,81.41,0,RING/U-box,NULL; seg,NULL;
SYNOVIOLIN-RELATED,NULL; no description,Zinc finger,
RING/FYVE/PHD-type; ,CUFF.58689.1
(549 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g007710.1 | ubiquitin-protein ligase synoviolin | HC | chr... 900 0.0
Medtr4g077800.1 | E3 ubiquitin-protein ligase synoviolin-like pr... 775 0.0
Medtr5g007710.2 | ubiquitin-protein ligase synoviolin | HC | chr... 766 0.0
Medtr4g077800.2 | E3 ubiquitin-protein ligase synoviolin-like pr... 764 0.0
Medtr3g007760.1 | E3 ubiquitin protein ligase RIN2 | HC | chr3:1... 125 9e-29
Medtr3g007760.2 | E3 ubiquitin protein ligase RIN2 | HC | chr3:1... 118 1e-26
Medtr7g074140.1 | zinc finger, C3HC4 type (RING finger) protein ... 61 3e-09
Medtr5g068460.1 | zinc finger, C3HC4 type (RING finger) protein ... 60 5e-09
Medtr3g081030.1 | RING-H2 zinc finger protein | HC | chr3:367017... 60 7e-09
Medtr3g081030.2 | RING-H2 zinc finger protein | HC | chr3:367017... 60 7e-09
Medtr3g025940.1 | zinc finger, C3HC4 type (RING finger) protein ... 57 3e-08
Medtr4g077703.1 | hypothetical protein | HC | chr4:29787267-2978... 57 6e-08
Medtr1g066430.1 | zinc finger, C3HC4 type (RING finger) protein ... 55 3e-07
Medtr5g079050.1 | zinc finger, C3HC4 type (RING finger) protein ... 54 3e-07
Medtr1g014710.1 | RING-finger ubiquitin ligase | HC | chr1:35057... 54 4e-07
Medtr4g056590.1 | zinc finger, C3HC4 type (RING finger) protein ... 53 6e-07
Medtr5g016960.1 | zinc finger, C3HC4 type (RING finger) protein ... 53 6e-07
Medtr5g078900.1 | zinc finger, C3HC4 type (RING finger) protein ... 53 9e-07
Medtr6g007680.1 | anaphase-promoting complex subunit 11 RING-H2 ... 53 1e-06
Medtr3g095560.1 | RING-H2 zinc finger protein | HC | chr3:436665... 52 1e-06
Medtr5g016920.1 | zinc finger, C3HC4 type (RING finger) protein ... 52 2e-06
Medtr6g016350.1 | zinc finger, C3HC4 type (RING finger) protein ... 51 2e-06
Medtr7g113800.1 | RING-H2 zinc finger protein | HC | chr7:469012... 51 3e-06
Medtr8g092985.1 | RING-H2 finger protein ATL1L | HC | chr8:38859... 51 3e-06
Medtr8g092930.1 | RING-H2 finger protein ATL1L | HC | chr8:38841... 50 4e-06
Medtr0067s0100.2 | zinc finger, C3HC4 type (RING finger) protein... 50 4e-06
Medtr0067s0100.1 | zinc finger, C3HC4 type (RING finger) protein... 50 4e-06
Medtr8g092990.1 | RING-H2 finger protein ATL1L | HC | chr8:38862... 50 5e-06
Medtr5g071930.1 | zinc finger, C3HC4 type (RING finger) protein ... 50 6e-06
Medtr8g092970.1 | RING-H2 finger protein ATL1L | HC | chr8:38850... 50 6e-06
>Medtr5g007710.1 | ubiquitin-protein ligase synoviolin | HC |
chr5:1471216-1474618 | 20130731
Length = 539
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/554 (80%), Positives = 483/554 (87%), Gaps = 20/554 (3%)
Query: 1 MMRLKTYAGLSLIATLAITYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCTLWQL 60
MMRLKTYAGLSL+ATLAI YHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMC LWQL
Sbjct: 1 MMRLKTYAGLSLMATLAIAYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCVLWQL 60
Query: 61 TKKLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA 120
TKK+FLG+LREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA
Sbjct: 61 TKKVFLGNLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA 120
Query: 121 QKRVEYIETTPSVTWLSHVRIVSFMGFLLLLDSIFLYSSMKHLIETWQASVSLFFSFEYM 180
QKRVEYIETTP+VT LSH+RIVSFMGFLLLLDSIFLYSS+KHLI+TWQASVSLFF+FEYM
Sbjct: 121 QKRVEYIETTPTVTTLSHIRIVSFMGFLLLLDSIFLYSSLKHLIQTWQASVSLFFAFEYM 180
Query: 181 ILATTTVSIFVKYIFYVSDMLMEGQWEKKPVFTFYLELIRDLLHLSMYLCFFFLIFVNYG 240
ILATTTVSIFVKY+FYV+D+LMEGQW+KKPVFTFYL+L+RDLLHLSMYLCFFF+IFVNYG
Sbjct: 181 ILATTTVSIFVKYVFYVTDILMEGQWDKKPVFTFYLDLVRDLLHLSMYLCFFFVIFVNYG 240
Query: 241 IPLHLIRELYETFRNFKVRIADYIRYRKITSNMNDRFPDATPEELNARDATCIICREEMT 300
IPLHLIRELYETFRNFK RIADYIRYRKITSNMNDRFP+AT EELNA DATCIICREEMT
Sbjct: 241 IPLHLIRELYETFRNFKARIADYIRYRKITSNMNDRFPEATSEELNASDATCIICREEMT 300
Query: 301 TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTVAGGQQGSQSDGHRQGTGT 360
AKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTVAGGQQGSQSDGH+QGT
Sbjct: 301 AAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTVAGGQQGSQSDGHQQGT-- 358
Query: 361 AGSTAQNEAGSGMATDSLSRHEARLQXXXXXXSIYEKSYVYPSASSSVCSPGHAFYTP-- 418
GST Q E G+G+ATDSLSRH+ARLQ SIYEKSYVYP A+S V SPG+ Y P
Sbjct: 359 -GSTGQTELGNGVATDSLSRHQARLQAAAAAASIYEKSYVYPPATSFVRSPGYTNYPPVA 417
Query: 419 ---SSTGFNGEQASSEQAQKQFLIPGQPTNVSFPPMGHYNFLPSQTFAAPVNYGEAFGND 475
+S NGEQASS+QAQ QF IPG P N FP GH+++LPSQ + AP+NYGE F ND
Sbjct: 418 AESTSVDLNGEQASSQQAQNQFHIPGGPINAPFPSTGHFHYLPSQPYMAPLNYGEGFEND 477
Query: 476 PNIPSSQLEAHRKFLRWQIEVLEKQLRNLPETKADDRSVDDGTSSSDSRGKLITXXXXXX 535
PNI SQLEAH+K L+ QIE+L+ QL+NL T+A RSVDDG SS+S+GKL
Sbjct: 478 PNISKSQLEAHKKILQQQIEILQNQLQNLQSTEA-KRSVDDGAPSSESKGKL-------- 528
Query: 536 XXXXXDEEIQDGKA 549
EIQDGKA
Sbjct: 529 ---SSSSEIQDGKA 539
>Medtr4g077800.1 | E3 ubiquitin-protein ligase synoviolin-like
protein | HC | chr4:29778294-29784602 | 20130731
Length = 522
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/529 (75%), Positives = 434/529 (82%), Gaps = 27/529 (5%)
Query: 1 MMRLKTYAGLSLIATLAITYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCTLWQL 60
MMRL+TYAGLSLIATLAITYHAFNSR QFYPAMVYL+TSKISLVLLLNM LVIMC LWQL
Sbjct: 1 MMRLQTYAGLSLIATLAITYHAFNSRSQFYPAMVYLATSKISLVLLLNMALVIMCVLWQL 60
Query: 61 TKKLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA 120
TKK+FLGSLREAEVERLNEQ+WREVMEILFAITIFRQDFS+TFLAMVTALLLIKALHWLA
Sbjct: 61 TKKVFLGSLREAEVERLNEQAWREVMEILFAITIFRQDFSITFLAMVTALLLIKALHWLA 120
Query: 121 QKRVEYIETTPSVTWLSHVRIVSFMGFLLLLDSIFLYSSMKHLIETWQASVSLFFSFEYM 180
QKRVEYIETTPSV+ LS VRIVSF+GFLLLLD FLYSS+KHL+ T QASVS+FFSFEYM
Sbjct: 121 QKRVEYIETTPSVSVLSQVRIVSFLGFLLLLDGAFLYSSVKHLLATKQASVSIFFSFEYM 180
Query: 181 ILATTTVSIFVKYIFYVSDMLMEGQWEKKPVFTFYLELIRDLLHLSMYLCFFFLIFVNYG 240
ILATTTVSIFVKYIFYVSDMLMEGQWEKKPVFTFYLEL+RDLLHLSMY+CFF IF+NYG
Sbjct: 181 ILATTTVSIFVKYIFYVSDMLMEGQWEKKPVFTFYLELVRDLLHLSMYMCFFLAIFINYG 240
Query: 241 IPLHLIRELYETFRNFKVRIADYIRYRKITSNMNDRFPDATPEELNARDATCIICREEMT 300
+PLHLIRELYETFRNFKVRI+DY+RYRKITSNMNDRFPDATPEELN+ D TCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFKVRISDYLRYRKITSNMNDRFPDATPEELNSNDLTCIICREEMT 300
Query: 301 TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTVAGGQQGSQSDGHRQGTGT 360
TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVP ENG T GGQQ QSD +RQG GT
Sbjct: 301 TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPSENGPTATGGQQRPQSDANRQGEGT 360
Query: 361 AGSTAQNEAGSGMATDSLSRHEARLQXXXXXXSIYEKSYVYPSASSSVCSPGHAFYTPSS 420
GS+AQ E G G+A D+LSRH+ARLQ SIYEKSYVYPS + + P H SS
Sbjct: 361 -GSSAQTEVGDGVARDNLSRHQARLQAAAAAASIYEKSYVYPSPTFACYPPIHRSVVQSS 419
Query: 421 TG--FNGEQASSEQAQKQFLIPGQPTNVSFPPMGHYNFLPSQTFAAPVNYGEAFGNDPNI 478
+GEQ SSEQAQKQF+IPG P N S P+ + PSQT AA + YGE
Sbjct: 420 NNAELDGEQVSSEQAQKQFVIPGGPMNASSSPVQSFYVPPSQTHAAHMTYGEG------- 472
Query: 479 PSSQLEAHRKFLRWQIEVLEKQLRNLPETKADDRSVDDGTSS-SDSRGK 526
SQL A K L+ + N+ D+SV + TSS SDSRGK
Sbjct: 473 --SQLGAQTK--------LQNEKTNV------DKSVGEDTSSVSDSRGK 505
>Medtr5g007710.2 | ubiquitin-protein ligase synoviolin | HC |
chr5:1471216-1473344 | 20130731
Length = 422
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/414 (88%), Positives = 389/414 (93%), Gaps = 3/414 (0%)
Query: 1 MMRLKTYAGLSLIATLAITYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCTLWQL 60
MMRLKTYAGLSL+ATLAI YHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMC LWQL
Sbjct: 1 MMRLKTYAGLSLMATLAIAYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCVLWQL 60
Query: 61 TKKLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA 120
TKK+FLG+LREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA
Sbjct: 61 TKKVFLGNLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA 120
Query: 121 QKRVEYIETTPSVTWLSHVRIVSFMGFLLLLDSIFLYSSMKHLIETWQASVSLFFSFEYM 180
QKRVEYIETTP+VT LSH+RIVSFMGFLLLLDSIFLYSS+KHLI+TWQASVSLFF+FEYM
Sbjct: 121 QKRVEYIETTPTVTTLSHIRIVSFMGFLLLLDSIFLYSSLKHLIQTWQASVSLFFAFEYM 180
Query: 181 ILATTTVSIFVKYIFYVSDMLMEGQWEKKPVFTFYLELIRDLLHLSMYLCFFFLIFVNYG 240
ILATTTVSIFVKY+FYV+D+LMEGQW+KKPVFTFYL+L+RDLLHLSMYLCFFF+IFVNYG
Sbjct: 181 ILATTTVSIFVKYVFYVTDILMEGQWDKKPVFTFYLDLVRDLLHLSMYLCFFFVIFVNYG 240
Query: 241 IPLHLIRELYETFRNFKVRIADYIRYRKITSNMNDRFPDATPEELNARDATCIICREEMT 300
IPLHLIRELYETFRNFK RIADYIRYRKITSNMNDRFP+AT EELNA DATCIICREEMT
Sbjct: 241 IPLHLIRELYETFRNFKARIADYIRYRKITSNMNDRFPEATSEELNASDATCIICREEMT 300
Query: 301 TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTVAGGQQGSQSDGHRQGTGT 360
AKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTVAGGQQGSQSDGH+QGT
Sbjct: 301 AAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTVAGGQQGSQSDGHQQGT-- 358
Query: 361 AGSTAQNEAGSGMATDSLSRHEARLQXXXXXXSIYEKSYVYPSASSSVCSPGHA 414
GST Q E G+G+ATDSLSRH+ARLQ SIYEKSYVYP A+S V HA
Sbjct: 359 -GSTGQTELGNGVATDSLSRHQARLQAAAAAASIYEKSYVYPPATSFVRYGVHA 411
>Medtr4g077800.2 | E3 ubiquitin-protein ligase synoviolin-like
protein | HC | chr4:29778294-29783780 | 20130731
Length = 495
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/473 (80%), Positives = 410/473 (86%), Gaps = 3/473 (0%)
Query: 1 MMRLKTYAGLSLIATLAITYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCTLWQL 60
MMRL+TYAGLSLIATLAITYHAFNSR QFYPAMVYL+TSKISLVLLLNM LVIMC LWQL
Sbjct: 1 MMRLQTYAGLSLIATLAITYHAFNSRSQFYPAMVYLATSKISLVLLLNMALVIMCVLWQL 60
Query: 61 TKKLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA 120
TKK+FLGSLREAEVERLNEQ+WREVMEILFAITIFRQDFS+TFLAMVTALLLIKALHWLA
Sbjct: 61 TKKVFLGSLREAEVERLNEQAWREVMEILFAITIFRQDFSITFLAMVTALLLIKALHWLA 120
Query: 121 QKRVEYIETTPSVTWLSHVRIVSFMGFLLLLDSIFLYSSMKHLIETWQASVSLFFSFEYM 180
QKRVEYIETTPSV+ LS VRIVSF+GFLLLLD FLYSS+KHL+ T QASVS+FFSFEYM
Sbjct: 121 QKRVEYIETTPSVSVLSQVRIVSFLGFLLLLDGAFLYSSVKHLLATKQASVSIFFSFEYM 180
Query: 181 ILATTTVSIFVKYIFYVSDMLMEGQWEKKPVFTFYLELIRDLLHLSMYLCFFFLIFVNYG 240
ILATTTVSIFVKYIFYVSDMLMEGQWEKKPVFTFYLEL+RDLLHLSMY+CFF IF+NYG
Sbjct: 181 ILATTTVSIFVKYIFYVSDMLMEGQWEKKPVFTFYLELVRDLLHLSMYMCFFLAIFINYG 240
Query: 241 IPLHLIRELYETFRNFKVRIADYIRYRKITSNMNDRFPDATPEELNARDATCIICREEMT 300
+PLHLIRELYETFRNFKVRI+DY+RYRKITSNMNDRFPDATPEELN+ D TCIICREEMT
Sbjct: 241 VPLHLIRELYETFRNFKVRISDYLRYRKITSNMNDRFPDATPEELNSNDLTCIICREEMT 300
Query: 301 TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTVAGGQQGSQSDGHRQGTGT 360
TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVP ENG T GGQQ QSD +RQG GT
Sbjct: 301 TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPSENGPTATGGQQRPQSDANRQGEGT 360
Query: 361 AGSTAQNEAGSGMATDSLSRHEARLQXXXXXXSIYEKSYVYPSASSSVCSPGHAFYTPSS 420
GS+AQ E G G+A D+LSRH+ARLQ SIYEKSYVYPS + + P H SS
Sbjct: 361 -GSSAQTEVGDGVARDNLSRHQARLQAAAAAASIYEKSYVYPSPTFACYPPIHRSVVQSS 419
Query: 421 TG--FNGEQASSEQAQKQFLIPGQPTNVSFPPMGHYNFLPSQTFAAPVNYGEA 471
+GEQ SSEQAQKQF+IPG P N S P+ + PSQT AA + YGE
Sbjct: 420 NNAELDGEQVSSEQAQKQFVIPGGPMNASSSPVQSFYVPPSQTHAAHMTYGEG 472
>Medtr3g007760.1 | E3 ubiquitin protein ligase RIN2 | HC |
chr3:1166460-1173444 | 20130731
Length = 589
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 176/386 (45%), Gaps = 60/386 (15%)
Query: 29 FYPAMVYLSTSKISLVLLLNMGLVIMCTLWQLTKKLFLGSLREAEVERLNEQSWREV--- 85
Y +V L+ I++ +LLN+ L K +F L +E +L E+ V
Sbjct: 57 LYTTIVLLTNCMINVFVLLNLCL----------KAMFFSELYPSETRKLIERLVNYVIYK 106
Query: 86 ---MEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPSVTWLSHVRIV 142
+ ++ T+++ T+LA++ +L + +AL A+ R+E + +PS T +++R+
Sbjct: 107 GTFLPLVVLPTLYQAGLWSTWLAVLCSLKMFQAL---ARDRLERLNASPSATPWTYLRVY 163
Query: 143 SFMGFLLLLDSIFLYSSMKHLIETWQASVSLFFSFEYMILATTTVSIFVKYIFYVSDM-- 200
S + F+ L+D +++ ++ + T +S+ L FE + +A T+ + + F + D+
Sbjct: 164 SALLFIFLVDVLWIRLCLE-IYSTHGSSMFLLLFFEPLSIAFETLQAILVHGFQLLDIWI 222
Query: 201 ------------------LMEGQW-EKKPVFTFYLELIRDLLHLSMYLCFFFLIFVNYGI 241
L G E K + L D+ M L + I+ +G+
Sbjct: 223 HHSACSGSDFRTHKLLDALTAGSLLEWKGILIRNLGFFLDMATFFMALGHYLYIWRLHGM 282
Query: 242 PLHL--------IRELYETFRNFKVRIADYIRYRKITSNMNDRFPDATPEELNARDATCI 293
HL IR L N RI +IR R ++ PDAT EEL + C
Sbjct: 283 AFHLVDAVLFLNIRALLSAMIN---RIKGFIRLRIALGALHAALPDATTEELRGYEDECA 339
Query: 294 ICREEMTTAKKLICGHLFHVHCLRSWLER----QHTCPTCRALVVP--PENGTTVAGGQQ 347
ICRE M AKKL C HLFH+ CLRSWL++ +TCPTCR + PEN T + G
Sbjct: 340 ICREPMAKAKKLNCNHLFHLACLRSWLDQGLTEMYTCPTCRKPLFAGRPENETNSSTGVI 399
Query: 348 GSQSDGHRQGTGTAGSTAQNEAGSGM 373
S RQ +AG QN A M
Sbjct: 400 SSDEQLARQ--MSAGFDRQNSARHNM 423
>Medtr3g007760.2 | E3 ubiquitin protein ligase RIN2 | HC |
chr3:1168361-1173444 | 20130731
Length = 566
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 161/353 (45%), Gaps = 50/353 (14%)
Query: 62 KKLFLGSLREAEVERLNEQSWREV------MEILFAITIFRQDFSVTFLAMVTALLLIKA 115
+ +F L +E +L E+ V + ++ T+++ T+LA++ +L + +A
Sbjct: 57 QAMFFSELYPSETRKLIERLVNYVIYKGTFLPLVVLPTLYQAGLWSTWLAVLCSLKMFQA 116
Query: 116 LHWLAQKRVEYIETTPSVTWLSHVRIVSFMGFLLLLDSIFLYSSMKHLIETWQASVSLFF 175
L A+ R+E + +PS T +++R+ S + F+ L+D +++ ++ + T +S+ L
Sbjct: 117 L---ARDRLERLNASPSATPWTYLRVYSALLFIFLVDVLWIRLCLE-IYSTHGSSMFLLL 172
Query: 176 SFEYMILATTTVSIFVKYIFYVSDMLMEGQ---------------------WEKKPVFTF 214
FE + +A T+ + + F + D+ + E K +
Sbjct: 173 FFEPLSIAFETLQAILVHGFQLLDIWIHHSACSGSDFRTHKLLDALTAGSLLEWKGILIR 232
Query: 215 YLELIRDLLHLSMYLCFFFLIFVNYGIPLHL--------IRELYETFRNFKVRIADYIRY 266
L D+ M L + I+ +G+ HL IR L N RI +IR
Sbjct: 233 NLGFFLDMATFFMALGHYLYIWRLHGMAFHLVDAVLFLNIRALLSAMIN---RIKGFIRL 289
Query: 267 RKITSNMNDRFPDATPEELNARDATCIICREEMTTAKKLICGHLFHVHCLRSWLER---- 322
R ++ PDAT EEL + C ICRE M AKKL C HLFH+ CLRSWL++
Sbjct: 290 RIALGALHAALPDATTEELRGYEDECAICREPMAKAKKLNCNHLFHLACLRSWLDQGLTE 349
Query: 323 QHTCPTCRALVVP--PENGTTVAGGQQGSQSDGHRQGTGTAGSTAQNEAGSGM 373
+TCPTCR + PEN T + G S RQ +AG QN A M
Sbjct: 350 MYTCPTCRKPLFAGRPENETNSSTGVISSDEQLARQ--MSAGFDRQNSARHNM 400
>Medtr7g074140.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:27693298-27698469 | 20130731
Length = 426
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 280 ATPEELNARDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPE 337
AT E++ A C IC+E+M L C H+F C+ W ER+ TCP CRALV P +
Sbjct: 353 ATSEQVIAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPAD 410
>Medtr5g068460.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr5:28979430-28987791 | 20130731
Length = 481
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 280 ATPEELNARDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALV 333
AT E++ A C IC+E+M + L C H+F C+ W ER+ TCP CRALV
Sbjct: 408 ATAEQVTAAGDLCAICQEKMHSPILLRCKHIFCEDCVSEWFERERTCPLCRALV 461
>Medtr3g081030.1 | RING-H2 zinc finger protein | HC |
chr3:36701768-36703963 | 20130731
Length = 216
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 283 EELNARDATCIICREEMTTAKKLI----CGHLFHVHCLRSWLERQHTCPTCRALVVP--- 335
E+L ARD+ C +C E ++L+ C H+FH+ C+ WL+ TCP CR ++P
Sbjct: 110 EDLQARDSLCCVCLGEFEVKEELLQIPYCKHVFHIDCIHHWLQSNSTCPLCRCSIIPTIT 169
Query: 336 ----PENGTTVAGGQQGSQSDGHRQGTGTAGSTAQNEAGSG 372
P + Q D + S+ ++AG+
Sbjct: 170 KFLNPAPPINIIISDPPHQ-DAINLDSPLPNSSLPDQAGAS 209
>Medtr3g081030.2 | RING-H2 zinc finger protein | HC |
chr3:36701768-36703966 | 20130731
Length = 216
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 283 EELNARDATCIICREEMTTAKKLI----CGHLFHVHCLRSWLERQHTCPTCRALVVP--- 335
E+L ARD+ C +C E ++L+ C H+FH+ C+ WL+ TCP CR ++P
Sbjct: 110 EDLQARDSLCCVCLGEFEVKEELLQIPYCKHVFHIDCIHHWLQSNSTCPLCRCSIIPTIT 169
Query: 336 ----PENGTTVAGGQQGSQSDGHRQGTGTAGSTAQNEAGSG 372
P + Q D + S+ ++AG+
Sbjct: 170 KFLNPAPPINIIISDPPHQ-DAINLDSPLPNSSLPDQAGAS 209
>Medtr3g025940.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr3:7918725-7915603 | 20130731
Length = 454
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 281 TPEELNARDATCIICREEMTTAK---KLICGHLFHVHCLRSWLERQHTCPTCR 330
P+E + ++ TC IC+E+ + +L C H++H+HC++ WLE ++ CP C+
Sbjct: 389 NPDETSTQNQTCTICQEDFVDGESIGRLNCIHVYHLHCIKQWLEMRNACPICK 441
>Medtr4g077703.1 | hypothetical protein | HC |
chr4:29787267-29787822 | 20130731
Length = 115
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 33/48 (68%)
Query: 424 NGEQASSEQAQKQFLIPGQPTNVSFPPMGHYNFLPSQTFAAPVNYGEA 471
+GEQ SSEQAQKQF+IPG P N S P+ + PSQT AA + YGE
Sbjct: 44 DGEQVSSEQAQKQFVIPGGPMNASSSPVQSFYVPPSQTHAAHMTYGEG 91
>Medtr1g066430.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr1:28541851-28546445 | 20130731
Length = 700
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 287 ARDATCIICREEMTTAKKL----ICGHLFHVHCLRSWLERQHTCPTCRALVVPPE 337
+++ TC IC EE + CGH +HV C+R WL ++ CP C+ +P E
Sbjct: 646 SQEGTCAICLEEYKNMDSIGTLETCGHDYHVSCIRKWLSMKNLCPICKVSALPDE 700
>Medtr5g079050.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr5:33803352-33800426 | 20130731
Length = 372
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 283 EELNARDATCIICREEMTTAK---KLICGHLFHVHCLRSWLERQHTCPTCR 330
EE + + TC IC+E+ + +L C H++H++C++ WLE ++ CP C+
Sbjct: 304 EETSTMNQTCTICQEDFIDGECIGRLDCNHIYHLNCIKQWLEEKNVCPICK 354
>Medtr1g014710.1 | RING-finger ubiquitin ligase | HC |
chr1:3505741-3509683 | 20130731
Length = 313
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 287 ARDATCIICREEMT---TAKKLICGHLFHVHCLRSWLERQHTCPTCR 330
+DA C ICRE + ++L C H FH CL+ WL+ ++CP CR
Sbjct: 228 GKDAECAICRENLVLNDQMQELPCKHTFHPPCLKPWLDEHNSCPICR 274
>Medtr4g056590.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:20790656-20791249 | 20130731
Length = 195
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 286 NARDATCIICREEMTTAK--KLI--CGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTT 341
+ + C+IC EE + K+I C H+FH C+ +WL TCP CR ++V
Sbjct: 117 DVKQPDCVICLEEFEVCEEVKMIPYCKHVFHAECIDTWLSAHVTCPICRCVIV------- 169
Query: 342 VAGGQQGSQSDGHRQGTGTAGSTAQNEAG 370
V GG G D H G T + E G
Sbjct: 170 VCGG--GGNVDEHV-GRSTVENEGDGEVG 195
>Medtr5g016960.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr5:6138041-6140664 | 20130731
Length = 605
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 283 EELNARDATCIICREEMTTAKK---LICGHLFHVHCLRSWLERQHTCPTC 329
EE + ++ TC IC+E+ ++ L C H+FH+ C++ WLE ++ CP C
Sbjct: 542 EETSTQNQTCTICQEDYVKGERIGRLDCMHIFHLDCIKQWLELKNVCPIC 591
>Medtr5g078900.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr5:33731973-33729291 | 20130731
Length = 378
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 283 EELNARDATCIICREEMTTAK---KLICGHLFHVHCLRSWLERQHTCPTCR 330
EE + + TC IC+E+ + + C H++H++C++ WLE ++ CP C+
Sbjct: 304 EETSTMNQTCTICQEDFIDGECIGRFDCNHIYHLNCIKQWLEEKNVCPICK 354
>Medtr6g007680.1 | anaphase-promoting complex subunit 11 RING-H2
finger protein | LC | chr6:1775318-1775785 | 20130731
Length = 155
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 234 LIFVNYGIPLHLIRELYETFRNFKVRIADYIRYRKITSNMN-DRFP--DATPEELNARDA 290
LIFV G+ +++ + + +++ D R R+ S ++ ++ P D +E +
Sbjct: 9 LIFV--GLVFYVLLRMCLPYGIYRIMRVD--RGRRSLSKVDLEKLPCYDYVAKENGSNPL 64
Query: 291 TCIICREEMTTAKKL----ICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTVAGGQ 346
C IC E T K IC H FH C+ WL R CP CR++ V +G V G
Sbjct: 65 DCAICLENFTIGDKCRLLPICEHNFHAQCVDQWLLRNSICPICRSM-VGSHSGDKVVIGN 123
Query: 347 QGSQS 351
G +S
Sbjct: 124 NGRES 128
>Medtr3g095560.1 | RING-H2 zinc finger protein | HC |
chr3:43666563-43665579 | 20130731
Length = 240
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 284 ELNARDATCIICREEMTTAKKL----ICGHLFHVHCLRSWLERQHTCPTCRALVVPPENG 339
+L + D+ C+IC E T K+ C H FHV C+ WL +CP CR ++ N
Sbjct: 128 KLPSLDSECVICLSEFTNGDKVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETCNK 187
Query: 340 TTVAGGQQGSQS 351
G QGS S
Sbjct: 188 IV---GSQGSSS 196
>Medtr5g016920.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr5:6120260-6121141 | 20130731
Length = 153
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 267 RKITSNMNDRFPDATPEELNARDATCIICREEMTTAKK---LICGHLFHVHCLRSWLERQ 323
++I ++ + + P E + + TC IC+E+ +K L C +FH+ C++ WLE +
Sbjct: 75 QEILRHIQQKTYQSCPNETSTHNQTCTICQEDYVEGEKIGRLDCMDIFHLDCIKQWLELR 134
Query: 324 HTCPTCR 330
+ CP C+
Sbjct: 135 NVCPICK 141
>Medtr6g016350.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr6:6040819-6042570 | 20130731
Length = 379
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 288 RDATCIICREEMTTAKK---LICGHLFHVHCLRSWLERQHTCPTCR 330
+D C +C++E+T +K L C H +H C+ WL ++TCP CR
Sbjct: 307 KDVVCAVCKDEVTVEEKVGKLPCSHCYHGDCILPWLNIRNTCPVCR 352
>Medtr7g113800.1 | RING-H2 zinc finger protein | HC |
chr7:46901295-46899362 | 20130731
Length = 361
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 292 CIICREEM--TTAKKLI--CGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTVAGGQQ 347
C +C E T +LI C H+FH C+ WL TCP CRA +V P+ G +V G +
Sbjct: 120 CAVCLMEFEDTETLRLIPKCDHVFHPECIDEWLSSHTTCPVCRANLV-PQPGDSVHGVPE 178
Query: 348 GSQSDGHRQG 357
Q D Q
Sbjct: 179 SQQQDVEAQN 188
>Medtr8g092985.1 | RING-H2 finger protein ATL1L | HC |
chr8:38859179-38858459 | 20130731
Length = 211
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 280 ATPEELNARDATCIICREEMTTAKKL----ICGHLFHVHCLRSWLERQHTCPTCRALVVP 335
+T +L + DA C+IC E T +K+ C H FHV C+ WL+ +CP CR ++
Sbjct: 126 STDLKLPSLDAECMICLSEFTKGEKVRILPKCNHGFHVRCIDKWLKEHSSCPKCRQCLL- 184
Query: 336 PENGTTVAGGQ 346
E + G Q
Sbjct: 185 -ETCRKIGGSQ 194
>Medtr8g092930.1 | RING-H2 finger protein ATL1L | HC |
chr8:38841409-38840501 | 20130731
Length = 225
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 280 ATPEELNARDATCIICREEMTTAKKL----ICGHLFHVHCLRSWLERQHTCPTCRALVVP 335
+T +L + DA C+IC E T +K+ C H FHV C+ WL+ +CP CR ++
Sbjct: 127 STDLKLPSLDAECMICLSEFTKGEKVRILPKCNHGFHVRCIDKWLKEHSSCPKCRQCLL- 185
Query: 336 PENGTTVAGGQ 346
E + G Q
Sbjct: 186 -ETCRKIGGSQ 195
>Medtr0067s0100.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | scaffold0067:36395-39112 | 20130731
Length = 280
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 289 DATCIICREEM---TTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTVAGG 345
D+ C IC E + A+++ C H++H C+ WL + ++CP CR + P G+ GG
Sbjct: 187 DSHCPICIERFELGSKAREMACKHIYHSDCIVPWLIQHNSCPVCRVELPPHGRGSRNWGG 246
Query: 346 QQGSQSDGHRQGTG 359
+ + + + G G
Sbjct: 247 RNDNSTGQNNNGRG 260
>Medtr0067s0100.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | scaffold0067:36429-39008 | 20130731
Length = 280
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 289 DATCIICREEM---TTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTVAGG 345
D+ C IC E + A+++ C H++H C+ WL + ++CP CR + P G+ GG
Sbjct: 187 DSHCPICIERFELGSKAREMACKHIYHSDCIVPWLIQHNSCPVCRVELPPHGRGSRNWGG 246
Query: 346 QQGSQSDGHRQGTG 359
+ + + + G G
Sbjct: 247 RNDNSTGQNNNGRG 260
>Medtr8g092990.1 | RING-H2 finger protein ATL1L | HC |
chr8:38862025-38861044 | 20130731
Length = 231
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 284 ELN--ARDATCIICREEMTTAKKL----ICGHLFHVHCLRSWLERQHTCPTCRALVVPPE 337
ELN + D C+IC E T +KL C H FHV C+ WL+ +CP CR ++ E
Sbjct: 131 ELNLPSLDTDCMICLSEFTKGEKLRILPKCNHGFHVRCIDKWLKEHSSCPKCRQCLL--E 188
Query: 338 NGTTVAGGQ 346
+ G Q
Sbjct: 189 TCRKIGGSQ 197
>Medtr5g071930.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr5:30601510-30602100 | 20130731
Length = 196
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 266 YRKITSNMNDRFPDATPEELNARDATCIICR---EEMTTAKKLI-CGHLFHVHCLRSWLE 321
++ + S P EE ++ C+IC EE +KL CGH FHV C+ WL
Sbjct: 64 FKGLNSTTLSTIPTFVSEE-KTQELECVICLSYIEEGEIGRKLPKCGHAFHVECIDMWLN 122
Query: 322 RQHTCPTCRALVV 334
CP CR L+V
Sbjct: 123 SHCNCPICRGLIV 135
>Medtr8g092970.1 | RING-H2 finger protein ATL1L | HC |
chr8:38850514-38851359 | 20130731
Length = 217
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 284 ELN--ARDATCIICREEMTTAKKL----ICGHLFHVHCLRSWLERQHTCPTCRALVVPPE 337
ELN + D C+IC E T +KL C H FHV C+ WL+ +CP CR ++ E
Sbjct: 121 ELNLPSLDTDCMICLSEFTKGEKLRILPKCNHGFHVRCIDKWLKEHSSCPKCRQCLL--E 178
Query: 338 NGTTVAGGQ 346
+ G Q
Sbjct: 179 TCRKIGGSQ 187