Miyakogusa Predicted Gene

Lj6g3v0933500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0933500.1 Non Characterized Hit- tr|H3B7M6|H3B7M6_LATCH
Uncharacterized protein OS=Latimeria chalumnae GN=SMG9,29,1e-18,P-loop
containing nucleoside triphosphate hydrolases,NULL; no
description,NULL; seg,NULL; SUBFAMILY ,CUFF.58670.1
         (396 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g007700.1 | SMG9-like protein | HC | chr5:1464083-1468299 ...   635   0.0  
Medtr5g007700.2 | SMG9-like protein | HC | chr5:1464083-1468299 ...   542   e-154
Medtr5g061700.1 | SMG9 | HC | chr5:25630667-25625430 | 20130731       517   e-147

>Medtr5g007700.1 | SMG9-like protein | HC | chr5:1464083-1468299 |
           20130731
          Length = 396

 Score =  635 bits (1639), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/396 (78%), Positives = 335/396 (84%)

Query: 1   MAGSEPSPSPKILLAKPGLVTGGPVAGKFGRGAAGEDDSAQHRSRLPSVASLNLLSDSWD 60
           MAG EPSPSPKILLAKPGLVTG P++GKF R  AGEDDS QHRSRLPSVASLNLLSDSWD
Sbjct: 1   MAGPEPSPSPKILLAKPGLVTGAPISGKFNRSGAGEDDSTQHRSRLPSVASLNLLSDSWD 60

Query: 61  FHIDRFLPFLTENTDFTXXXXXXXXXXXKSTIMNELYGFDSSSPGMLPPFATQSEENRAM 120
           FH DRFLPFLTENTDFT           KS+IMNELYGFDS+SPGMLPPF  QSEENRAM
Sbjct: 61  FHFDRFLPFLTENTDFTVIGVIGSPGVGKSSIMNELYGFDSTSPGMLPPFTIQSEENRAM 120

Query: 121 ARHCSTGIEPRISAERIILLDTQPVFSASVLAEMMRPDGSSTVSVLSGESMSAELAHEIM 180
           ARHCSTGIEPRISAERIILLDTQPVFSASVLAEM RPDGSST+S+L+GES+SAELAH++M
Sbjct: 121 ARHCSTGIEPRISAERIILLDTQPVFSASVLAEMTRPDGSSTISLLNGESLSAELAHDLM 180

Query: 181 GIQLAVLLASVCHILLVVSEGVHDDCMWHLMLTVDLLKHGIPDPXXXXXXXXXXXXXGHE 240
           GIQLAV LASVCHILLVVSEG+HDD +WHLM TVDLLKHGI DP             GH+
Sbjct: 181 GIQLAVFLASVCHILLVVSEGIHDDSLWHLMSTVDLLKHGISDPSLLASSLSQNSSSGHD 240

Query: 241 KDNKLSGREYMATPVFVHTKLHDQEFTPKNFVQLRKTLIQYFKPSSFVREHAEHKPEEHI 300
            DNK+   EYMATPVFVHTKL DQEFTPKN +QLRK L+QYFKPSSFV E+   KP  H+
Sbjct: 241 SDNKVPEFEYMATPVFVHTKLQDQEFTPKNCLQLRKALMQYFKPSSFVGENTGKKPSNHV 300

Query: 301 SSSMVHDSPMDSNVPSLFAIPFKKKDENPRAQHGSYISALWKLRDQILSMKSPSFTRPVS 360
             SMVH SP+DS+  +LF IPFKKK+ENPRAQH SYISALWKLRDQILSMKSPSF RPVS
Sbjct: 301 PPSMVHGSPLDSDTLNLFTIPFKKKEENPRAQHESYISALWKLRDQILSMKSPSFRRPVS 360

Query: 361 EREWLKNSAKIWEQVKNSPTMLEYCRTLQQSGMFRR 396
           EREWLKNSAKIWEQVK SPT+LEYCRTLQ SGM+RR
Sbjct: 361 EREWLKNSAKIWEQVKKSPTILEYCRTLQHSGMYRR 396


>Medtr5g007700.2 | SMG9-like protein | HC | chr5:1464083-1468299 |
           20130731
          Length = 360

 Score =  542 bits (1396), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 266/347 (76%), Positives = 289/347 (83%)

Query: 1   MAGSEPSPSPKILLAKPGLVTGGPVAGKFGRGAAGEDDSAQHRSRLPSVASLNLLSDSWD 60
           MAG EPSPSPKILLAKPGLVTG P++GKF R  AGEDDS QHRSRLPSVASLNLLSDSWD
Sbjct: 1   MAGPEPSPSPKILLAKPGLVTGAPISGKFNRSGAGEDDSTQHRSRLPSVASLNLLSDSWD 60

Query: 61  FHIDRFLPFLTENTDFTXXXXXXXXXXXKSTIMNELYGFDSSSPGMLPPFATQSEENRAM 120
           FH DRFLPFLTENTDFT           KS+IMNELYGFDS+SPGMLPPF  QSEENRAM
Sbjct: 61  FHFDRFLPFLTENTDFTVIGVIGSPGVGKSSIMNELYGFDSTSPGMLPPFTIQSEENRAM 120

Query: 121 ARHCSTGIEPRISAERIILLDTQPVFSASVLAEMMRPDGSSTVSVLSGESMSAELAHEIM 180
           ARHCSTGIEPRISAERIILLDTQPVFSASVLAEM RPDGSST+S+L+GES+SAELAH++M
Sbjct: 121 ARHCSTGIEPRISAERIILLDTQPVFSASVLAEMTRPDGSSTISLLNGESLSAELAHDLM 180

Query: 181 GIQLAVLLASVCHILLVVSEGVHDDCMWHLMLTVDLLKHGIPDPXXXXXXXXXXXXXGHE 240
           GIQLAV LASVCHILLVVSEG+HDD +WHLM TVDLLKHGI DP             GH+
Sbjct: 181 GIQLAVFLASVCHILLVVSEGIHDDSLWHLMSTVDLLKHGISDPSLLASSLSQNSSSGHD 240

Query: 241 KDNKLSGREYMATPVFVHTKLHDQEFTPKNFVQLRKTLIQYFKPSSFVREHAEHKPEEHI 300
            DNK+   EYMATPVFVHTKL DQEFTPKN +QLRK L+QYFKPSSFV E+   KP  H+
Sbjct: 241 SDNKVPEFEYMATPVFVHTKLQDQEFTPKNCLQLRKALMQYFKPSSFVGENTGKKPSNHV 300

Query: 301 SSSMVHDSPMDSNVPSLFAIPFKKKDENPRAQHGSYISALWKLRDQI 347
             SMVH SP+DS+  +LF IPFKKK+ENPRAQH SYISALWKLRDQ+
Sbjct: 301 PPSMVHGSPLDSDTLNLFTIPFKKKEENPRAQHESYISALWKLRDQV 347


>Medtr5g061700.1 | SMG9 | HC | chr5:25630667-25625430 | 20130731
          Length = 398

 Score =  517 bits (1332), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 270/403 (66%), Positives = 305/403 (75%), Gaps = 14/403 (3%)

Query: 1   MAGSEPSPSPKILLAKPGLVTGGPVAGKFGRGAAGEDDSAQHRSRLPSVASLNLLSDSWD 60
           MAG +PSPSPKILL+K GLVT      K   G +GE+DS  HR  LPSVASLNLLSDSW+
Sbjct: 1   MAGPDPSPSPKILLSKSGLVTS-----KLSYGGSGEEDSTPHRPHLPSVASLNLLSDSWN 55

Query: 61  FHIDRFLPFLTENTDFTXXXXXXXXXXXKSTIMNELYGFDSSSPGMLPPFATQSEENRAM 120
           FH DRFLPFLTENTDFT           KSTIMNELYGFDS+S GMLPPFA QSEENRAM
Sbjct: 56  FHFDRFLPFLTENTDFTVIGVIGRPGVGKSTIMNELYGFDSTSHGMLPPFAIQSEENRAM 115

Query: 121 ARHCSTGIEPRISAERIILLDTQPVFSASVLAEMMRPDGSSTVSVLSGESMSAELAHEIM 180
           A+ CS GIEPRIS+ERIILLDTQPVFSASVLAE ++PDGSST+ V+ GES+SAELAHE+M
Sbjct: 116 AKDCSIGIEPRISSERIILLDTQPVFSASVLAETIKPDGSSTIPVMRGESLSAELAHELM 175

Query: 181 GIQLAVLLASVCHILLVVSEGVHDDCMWHLM--------LTVDLLKHGIPDPXXXXXXXX 232
            IQLAV LAS+CHILLVVSEGV D+ MWHLM          VDLLKH I DP        
Sbjct: 176 DIQLAVFLASICHILLVVSEGVLDNSMWHLMFMIFADASFCVDLLKHDISDPSLLASSLS 235

Query: 233 XXXXXGHEKDNKLSGREYMATPVFVHTKLHDQEFTPKNFVQLRKTLIQYFKPSSFVREHA 292
                G EKDNK+  REY+ATPVF+HTKL  +E +P+    L K L+  FK SSFVRE+ 
Sbjct: 236 QSSNSGIEKDNKVPEREYLATPVFIHTKLQGRELSPRIVWLLSKALMHDFKSSSFVRENT 295

Query: 293 EHKPEEHISSSMVHDSPMDSNVPSLFAIPFKKKDENPRAQHGSYISALWKLRDQILSMKS 352
            + P+EH SSS  H++ MDSN   LFAIPFKKK++NPR QH SYISALWKLRDQILSMK 
Sbjct: 296 GNNPDEH-SSSKFHNTDMDSNPLKLFAIPFKKKEDNPRVQHESYISALWKLRDQILSMKP 354

Query: 353 PSFTRPVSEREWLKNSAKIWEQVKNSPTMLEYCRTLQQSGMFR 395
           PSF RPVSEREWLK+SAKIWEQV+NS T+ EY R LQ SG++R
Sbjct: 355 PSFKRPVSEREWLKSSAKIWEQVRNSSTISEYGRALQHSGIYR 397