Miyakogusa Predicted Gene

Lj6g3v0933430.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0933430.1 Non Characterized Hit- tr|D8S3F0|D8S3F0_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,42.41,0.000000000000006,coiled-coil,NULL;
seg,NULL,CUFF.58656.1
         (306 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g091000.1 | pleckstrin-like (PH) domain protein | HC | chr...   351   4e-97

>Medtr5g091000.1 | pleckstrin-like (PH) domain protein | HC |
           chr5:39651834-39645349 | 20130731
          Length = 492

 Score =  351 bits (901), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 193/308 (62%), Positives = 211/308 (68%), Gaps = 4/308 (1%)

Query: 1   MQISLRNTLGMMTNKTTDGPMDDLTIMKETLLVKDEELQNFARDLRTRDSTIRDIXXXXX 60
           MQISLRN LGMM N+TTDGPMDDLTIMKETL VKDEELQN ARDLR RDSTI +I     
Sbjct: 176 MQISLRNALGMMPNRTTDGPMDDLTIMKETLRVKDEELQNLARDLRARDSTITEIADKLS 235

Query: 61  XXXXXXXXXXXXXHTIDEQWRNACEEIESLKKDSEKQLELSAQKLKEYEVKIISLSKEKE 120
                        +T+DEQ R  C EIE L+KDSEKQ ++ AQKLKEY+ KI  LSKE+E
Sbjct: 236 ETAEAAEAAASAAYTMDEQRRIVCAEIERLRKDSEKQQQVYAQKLKEYKEKITCLSKERE 295

Query: 121 QLSKQREAATQEANMWRSELGKARESGVILEGXXXXXXXXXXXXXXXXXXXXXXXVQGES 180
           QL+ QR+AA +EANMWR+ELGKARE  VILE                        VQ ES
Sbjct: 296 QLTDQRDAAIKEANMWRTELGKAREHDVILEATVVRAEEKVRVAEANAEARIKESVQRES 355

Query: 181 AAVSEKQELLAYVDKLKAQLQRQHIDSTEVFEKTESCSDTKHVDLTEENVDKACLSVSRS 240
            A  EKQELLAYV+ LKAQLQRQHID+T+V EKTESCSDTKHVD TEENVDKACLSVSR+
Sbjct: 356 VATKEKQELLAYVNMLKAQLQRQHIDATQVVEKTESCSDTKHVDPTEENVDKACLSVSRA 415

Query: 241 VPDPAAAECVVQMPTDQV-IIQPVGDNEWSDIQATEARXX-XXXXXXXXXXXXXLDIPVI 298
            P P  AE VV M TDQV  IQPVGDNEWSDIQATEAR                LDIPV+
Sbjct: 416 NPIP--AENVVHMATDQVNNIQPVGDNEWSDIQATEARISDVREVATPETDGSSLDIPVV 473

Query: 299 SQQGTNHQ 306
           SQ G NH 
Sbjct: 474 SQPGINHH 481