Miyakogusa Predicted Gene

Lj6g3v0929080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0929080.1 tr|I3T386|I3T386_LOTJA 60S ribosomal protein L18a
OS=Lotus japonicus PE=2 SV=1,100,0,60S RIBOSOMAL PROTEIN L18A,NULL;
60S RIBOSOMAL PROTEIN L18A,Ribosomal protein L18a;
Ribosomal_L18ae,,NODE_49588_length_757_cov_102.610306.path2.1
         (178 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g046320.1 | 60S ribosomal protein L18a-3 | HC | chr3:15289...   346   8e-96
Medtr5g091135.1 | 60S ribosomal protein L18a-3 | HC | chr5:39716...   343   4e-95
Medtr5g091120.1 | 60S ribosomal protein L18a-3 | HC | chr5:39707...   343   4e-95
Medtr2g098000.1 | 60S ribosomal protein L18a-3 | HC | chr2:41868...   343   4e-95
Medtr3g046320.2 | 60S ribosomal protein L18a-3 | HC | chr3:15289...   340   4e-94
Medtr2g019720.1 | 60S ribosomal protein L18a | LC | chr2:6490851...   109   2e-24

>Medtr3g046320.1 | 60S ribosomal protein L18a-3 | HC |
           chr3:15289143-15298145 | 20130731
          Length = 178

 Score =  346 bits (887), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 164/178 (92%), Positives = 171/178 (96%)

Query: 1   MVAFKFHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           M  FK+HQYQVVGRALPTE D HPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MATFKYHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYNEMASRHRVRS 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVE+MYNEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEYMYNEMASRHRVRH 120

Query: 121 PCIQIIKTATVEAKLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKASRPNLFM 178
           PCIQIIKTAT+ A LCKRESTKQFHNSKIKFPLV+KKIRPPTRKLKTTYKA++PN+FM
Sbjct: 121 PCIQIIKTATIPANLCKRESTKQFHNSKIKFPLVFKKIRPPTRKLKTTYKATKPNMFM 178


>Medtr5g091135.1 | 60S ribosomal protein L18a-3 | HC |
           chr5:39716434-39718748 | 20130731
          Length = 178

 Score =  343 bits (881), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 166/178 (93%), Positives = 168/178 (94%)

Query: 1   MVAFKFHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MV  KFHQYQVVGRALPTE D HPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVNAKFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYNEMASRHRVRS 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVE MYNEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVETMYNEMASRHRVRF 120

Query: 121 PCIQIIKTATVEAKLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKASRPNLFM 178
           PCIQIIKTAT+ A LCKRESTKQFHNSKIKFPLVYKKIRPPTR LKTTYKA +PNLFM
Sbjct: 121 PCIQIIKTATIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRSLKTTYKAKKPNLFM 178


>Medtr5g091120.1 | 60S ribosomal protein L18a-3 | HC |
           chr5:39707622-39709721 | 20130731
          Length = 178

 Score =  343 bits (881), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 166/178 (93%), Positives = 168/178 (94%)

Query: 1   MVAFKFHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MV  KFHQYQVVGRALPTE D HPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVNAKFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYNEMASRHRVRS 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVE MYNEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVETMYNEMASRHRVRF 120

Query: 121 PCIQIIKTATVEAKLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKASRPNLFM 178
           PCIQIIKTAT+ A LCKRESTKQFHNSKIKFPLVYKKIRPPTR LKTTYKA +PNLFM
Sbjct: 121 PCIQIIKTATIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRSLKTTYKAKKPNLFM 178


>Medtr2g098000.1 | 60S ribosomal protein L18a-3 | HC |
           chr2:41868668-41870282 | 20130731
          Length = 178

 Score =  343 bits (881), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 166/178 (93%), Positives = 168/178 (94%)

Query: 1   MVAFKFHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MV  KFHQYQVVGRALPTE D HPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVNAKFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYNEMASRHRVRS 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVE MYNEMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVETMYNEMASRHRVRF 120

Query: 121 PCIQIIKTATVEAKLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKASRPNLFM 178
           PCIQIIKTAT+ A LCKRESTKQFHNSKIKFPLVYKKIRPPTR LKTTYKA +PNLFM
Sbjct: 121 PCIQIIKTATIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRSLKTTYKAKKPNLFM 178


>Medtr3g046320.2 | 60S ribosomal protein L18a-3 | HC |
           chr3:15289143-15298145 | 20130731
          Length = 176

 Score =  340 bits (872), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 161/174 (92%), Positives = 169/174 (97%)

Query: 5   KFHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAIN 64
           ++HQYQVVGRALPTE D HPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAIN
Sbjct: 3   QYHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAIN 62

Query: 65  EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYNEMASRHRVRSPCIQ 124
           EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVE+MYNEMASRHRVR PCIQ
Sbjct: 63  EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEYMYNEMASRHRVRHPCIQ 122

Query: 125 IIKTATVEAKLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKASRPNLFM 178
           IIKTAT+ A LCKRESTKQFHNSKIKFPLV+KKIRPPTRKLKTTYKA++PN+FM
Sbjct: 123 IIKTATIPANLCKRESTKQFHNSKIKFPLVFKKIRPPTRKLKTTYKATKPNMFM 176


>Medtr2g019720.1 | 60S ribosomal protein L18a | LC |
           chr2:6490851-6491959 | 20130731
          Length = 126

 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/85 (60%), Positives = 64/85 (75%)

Query: 92  MYKEYRDTTLNGAVEHMYNEMASRHRVRSPCIQIIKTATVEAKLCKRESTKQFHNSKIKF 151
           MYKE+RDTTLNGAV+ MYNE ASRHRV  PCIQIIKTAT+ AKLCKRESTKQFH+SK + 
Sbjct: 1   MYKEFRDTTLNGAVDLMYNETASRHRVCFPCIQIIKTATIPAKLCKRESTKQFHDSKDQV 60

Query: 152 PLVYKKIRPPTRKLKTTYKASRPNL 176
           P+ +++    T++ +   +     L
Sbjct: 61  PIGFQENHTTTQEAEDNIQGQEAEL 85