Miyakogusa Predicted Gene

Lj6g3v0927840.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0927840.1 tr|G7ISI4|G7ISI4_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_2g020100 PE=4 SV=1,32.65,0.000000008,DUF295,Protein
of unknown function DUF295,CUFF.58630.1
         (136 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g020100.1 | hypothetical protein | LC | chr2:6664962-66630...    65   3e-11

>Medtr2g020100.1 | hypothetical protein | LC | chr2:6664962-6663065
           | 20130731
          Length = 566

 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 3/98 (3%)

Query: 4   DKIFGIAVHRLDFSQSIWKRVKSIKDMVFFLSDNDLPFACPVNHGGGGGGLIYFTSMNKK 63
           D++  + V++   +Q +W++V+S+KD VFF+S  D  FAC   +    GG +Y    +  
Sbjct: 231 DRVTAVFVYKFYCTQRVWEKVESVKDTVFFISSVDSAFACQATNPETEGGRVYIALKDCN 290

Query: 64  IVHIFNLEDNSLRICKAFPENWFPPKSF--WVMPNLRM 99
             +I+N+ED SL   + F  N    +S+  W MP+ R+
Sbjct: 291 FFYIYNIEDRSLVTSQHF-SNLSARRSYSRWFMPDTRI 327