Miyakogusa Predicted Gene

Lj6g3v0927310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0927310.1 Non Characterized Hit- tr|I1KUS8|I1KUS8_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,45.12,0.00001,
,CUFF.58640.1
         (127 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g032110.1 | VAC14-like protein | HC | chr1:11371433-113624...    52   2e-07
Medtr8g105270.1 | vacuolar 14 Fab1-binding region protein | HC |...    51   3e-07
Medtr2g099720.1 | survival protein SurE-like phosphatase/nucleot...    50   6e-07

>Medtr1g032110.1 | VAC14-like protein | HC | chr1:11371433-11362455
           | 20130731
          Length = 733

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/28 (89%), Positives = 25/28 (89%)

Query: 100 DSYGNVQSAAQLLDRLVKDIVTESDQFS 127
           DS  NVQSAA LLDRLVKDIVTESDQFS
Sbjct: 143 DSDANVQSAAHLLDRLVKDIVTESDQFS 170


>Medtr8g105270.1 | vacuolar 14 Fab1-binding region protein | HC |
           chr8:44410257-44400965 | 20130731
          Length = 723

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/28 (89%), Positives = 25/28 (89%)

Query: 100 DSYGNVQSAAQLLDRLVKDIVTESDQFS 127
           DS  NVQSAA LLDRLVKDIVTESDQFS
Sbjct: 143 DSDPNVQSAAHLLDRLVKDIVTESDQFS 170


>Medtr2g099720.1 | survival protein SurE-like
          phosphatase/nucleotidase | HC | chr2:42773680-42777246
          | 20130731
          Length = 377

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/88 (44%), Positives = 45/88 (51%), Gaps = 30/88 (34%)

Query: 1  MIPPGL-----EALLNRKP---------------------PKNHRSPQTKTLLPARNSDG 34
          M+PPGL     EALLNRK                      PK     ++K ++   NSDG
Sbjct: 1  MMPPGLVSNLQEALLNRKITPSQQDESNDTVSSTNDDNPNPKPIEFDESKPIILLTNSDG 60

Query: 35 VESPG---LVEALVQQGLYNVRNVCVPQ 59
          VES G   LVEALV Q LYNV +VCVPQ
Sbjct: 61 VESSGLTHLVEALVLQNLYNV-HVCVPQ 87