Miyakogusa Predicted Gene
- Lj6g3v0921010.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0921010.1 Non Characterized Hit- tr|I1N0W8|I1N0W8_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
GN=G,86.84,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
RNA-binding domain, RBD,NULL; RRM_2,RNA recognition,CUFF.58558.1
(759 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g448370.1 | RNA recognition motif 2 in plant MEI2-like pro... 1259 0.0
Medtr3g448370.4 | RNA recognition motif 2 in plant MEI2-like pro... 1258 0.0
Medtr3g448370.2 | RNA recognition motif 2 in plant MEI2-like pro... 1258 0.0
Medtr3g448370.3 | RNA recognition motif 2 in plant MEI2-like pro... 1257 0.0
Medtr3g448370.5 | RNA recognition motif 2 in plant MEI2-like pro... 1193 0.0
Medtr2g049640.2 | RNA recognition motif 2 in plant MEI2-like pro... 912 0.0
Medtr2g049640.1 | RNA recognition motif 2 in plant MEI2-like pro... 912 0.0
Medtr3g098620.5 | RNA recognition motif 1 in plant MEI2-like pro... 269 1e-71
Medtr3g098620.4 | RNA recognition motif 1 in plant MEI2-like pro... 268 1e-71
Medtr3g098620.1 | RNA recognition motif 1 in plant MEI2-like pro... 268 1e-71
Medtr3g098620.3 | RNA recognition motif 1 in plant MEI2-like pro... 268 1e-71
Medtr3g098620.2 | RNA recognition motif 1 in plant MEI2-like pro... 268 1e-71
Medtr8g100160.1 | RNA recognition motif 1 in plant MEI2-like pro... 264 2e-70
Medtr8g100160.2 | RNA recognition motif 1 in plant MEI2-like pro... 264 2e-70
Medtr7g020950.2 | RNA recognition motif 1 in plant MEI2-like pro... 250 4e-66
Medtr7g020950.1 | RNA recognition motif 1 in plant MEI2-like pro... 250 5e-66
Medtr7g118210.1 | RNA recognition motif 2 in plant MEI2-like pro... 230 5e-60
Medtr5g058270.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 222 1e-57
Medtr5g068540.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 206 7e-53
Medtr3g086380.1 | RNA recognition motif 1 in terminal EAR1-like ... 142 2e-33
Medtr3g462120.1 | RNA recognition motif protein | LC | chr3:2477... 97 5e-20
Medtr4g071310.1 | RNA recognition motif 3 in plant MEI2-like pro... 81 3e-15
Medtr5g059620.1 | RNA recognition motif 3 in plant MEI2-like pro... 80 1e-14
Medtr0166s0030.1 | RNA recognition motif 3 in plant MEI2-like pr... 79 2e-14
Medtr0166s0040.1 | RNA recognition motif 3 in plant MEI2-like pr... 76 1e-13
Medtr5g059640.1 | RNA recognition motif 3 in plant MEI2-like pro... 76 2e-13
Medtr4g068120.2 | flowering time control FPA-like protein | HC |... 75 2e-13
Medtr4g068120.1 | flowering time control FPA-like protein | HC |... 75 2e-13
Medtr4g131970.1 | polyadenylate-binding protein RBP47C | HC | ch... 74 8e-13
Medtr2g022950.1 | polyadenylate-binding protein RBP47B | HC | ch... 73 1e-12
Medtr4g085540.1 | polyadenylate-binding protein | HC | chr4:3341... 61 3e-09
Medtr1g020080.1 | polyadenylate-binding protein RBP47C | HC | ch... 59 1e-08
Medtr3g101370.1 | polyadenylate-binding protein RBP47C | HC | ch... 59 1e-08
Medtr6g040190.1 | polyadenylate-binding protein | LC | chr6:1440... 57 6e-08
Medtr7g094660.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 57 6e-08
Medtr8g027190.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 57 7e-08
Medtr8g027190.2 | RNA-binding (RRM/RBD/RNP motif) family protein... 57 7e-08
Medtr2g097960.1 | polyadenylate-binding protein RBP47B | HC | ch... 57 7e-08
Medtr3g462100.1 | MEI2-like protein, putative | LC | chr3:247628... 56 1e-07
Medtr1g097440.2 | polyadenylate-binding protein | HC | chr1:4396... 55 3e-07
Medtr1g097440.1 | polyadenylate-binding protein | HC | chr1:4396... 55 3e-07
Medtr1g061870.1 | polyadenylate-binding plant protein, putative ... 53 1e-06
Medtr3g065190.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 52 2e-06
Medtr6g012500.1 | pollen allergen protein | LC | chr6:3804518-38... 52 2e-06
Medtr1g101520.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 50 7e-06
Medtr7g096260.1 | multiple RNA-binding domain protein | HC | chr... 50 7e-06
Medtr7g096260.2 | multiple RNA-binding domain protein | HC | chr... 50 8e-06
>Medtr3g448370.1 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16171071-16165028 | 20130731
Length = 856
Score = 1259 bits (3257), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/754 (82%), Positives = 663/754 (87%), Gaps = 6/754 (0%)
Query: 9 LLPDDEDELLAGIMDDFDLTRLPIQLEDLDENDLFANGGGFEMDFEPQXXXXXXXXXXXX 68
+LPDDEDELLAGIMDDFDL RLP QLEDLDENDLF NGGGFEMDFEPQ
Sbjct: 106 MLPDDEDELLAGIMDDFDLRRLPNQLEDLDENDLFVNGGGFEMDFEPQEGLSFGISKMSI 165
Query: 69 XXXXASSGIAQYAIPNGMGAVAGEHPYGEHPSRTLFVRNINSNVEDSELRILFEQYGDIR 128
AS+GI YAIPNG+G VAGEHPYGEHPSRTLFVRNINSNVEDSELR LFEQYGDIR
Sbjct: 166 SDGIASNGIGPYAIPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRTLFEQYGDIR 225
Query: 129 TLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTL 188
TLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTL
Sbjct: 226 TLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTL 285
Query: 189 VVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIA 248
VVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAA+AALKALNRSDIA
Sbjct: 286 VVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAADAALKALNRSDIA 345
Query: 249 GKRIKLEPSRPGGARRNLMQQLSQELEQDETRTFRHQVGSPLANSPPGNWAHFGSPIEPN 308
GKRIKLEPSRPGGARRNLMQQLSQELEQDE RTFR QVGSP+ANSPPG+WAHFGSP++PN
Sbjct: 346 GKRIKLEPSRPGGARRNLMQQLSQELEQDEARTFRSQVGSPIANSPPGSWAHFGSPVDPN 405
Query: 309 PLGSFSKSPGLGHASPMSTNHLSGLAALLSPHTSSPTKVAPIGKDPRRVTHQLF---ANS 365
PLGS+SKSPGLGHASP TNHLSGLAA+LSPHTS+ K+APIGKDP RV++Q+F ANS
Sbjct: 406 PLGSYSKSPGLGHASP--TNHLSGLAAILSPHTSTSPKIAPIGKDPGRVSNQMFTNSANS 463
Query: 366 GSTLGAAFQHSMSFPEQKVNATPRPXXXXXXXXXXXXXXXXXXXPQFLWGSPTPYSEHPK 425
GST G AFQHS+SFPE+ VN +PRP PQFLWGSPTPYSE+
Sbjct: 464 GSTQGVAFQHSISFPEKNVNVSPRPISAFGESNSSSSSVGTLSGPQFLWGSPTPYSENSN 523
Query: 426 TSAWSSSSLGHPFTSSDRRQGFPYTSHHSPFLGSQQHHQVGSAPSGLPLDRHFSYFPESP 485
TSAWSSSSLGHPFTSS +RQGFPYT H +PFLGSQ HH VGSAPSGLPL+R+F YFPESP
Sbjct: 524 TSAWSSSSLGHPFTSSAQRQGFPYTGHRNPFLGSQHHHHVGSAPSGLPLERNFRYFPESP 583
Query: 486 DASLMSPVGFGNLNHGDGNFMVNMGARASVGVSVGLSGTNTEIISPNFRMMSPLPRHGSL 545
DASLMSP+GFGN N GDGNFM+NMG+R+S G +GLS T +EI SPNF MMS LP HGSL
Sbjct: 584 DASLMSPIGFGNSNRGDGNFMMNMGSRSSAGHGIGLSATTSEIGSPNFGMMS-LPGHGSL 642
Query: 546 FLGNGSYTGPGATTIEGLAERARSRRPDNNGNQMDSKKLYQLDLEKIISGEDTRTTLMIK 605
FLGN Y GPG ++IEG ER RSRRPDN NQ++SKKLYQLDL+KI++GEDTRTTLMIK
Sbjct: 643 FLGNSLYAGPGVSSIEGFGERGRSRRPDNIVNQVESKKLYQLDLDKIVNGEDTRTTLMIK 702
Query: 606 NIPNKYTSKMLLAAIDENHCGTYDFVYLPIDFKNKCNVGYAFINMVSPSHIVPFFKAFNG 665
NIPNKYTSKMLLAAIDENH GTYDF+YLPIDFKNKCNVGYAFINMVSPSHIV FFKAFNG
Sbjct: 703 NIPNKYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVAFFKAFNG 762
Query: 666 KKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQGTGDQEHLL 725
KKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQ T DQEH L
Sbjct: 763 KKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQEHFL 822
Query: 726 SSNLNICIRQPDGSYTGDLLESPKGNLDEKLEKD 759
SSNLNICIRQPDGSY+GD+LESPKGN D+ LE++
Sbjct: 823 SSNLNICIRQPDGSYSGDMLESPKGNSDDNLERE 856
>Medtr3g448370.4 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16172198-16165028 | 20130731
Length = 867
Score = 1258 bits (3255), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/754 (82%), Positives = 663/754 (87%), Gaps = 6/754 (0%)
Query: 9 LLPDDEDELLAGIMDDFDLTRLPIQLEDLDENDLFANGGGFEMDFEPQXXXXXXXXXXXX 68
+LPDDEDELLAGIMDDFDL RLP QLEDLDENDLF NGGGFEMDFEPQ
Sbjct: 117 MLPDDEDELLAGIMDDFDLRRLPNQLEDLDENDLFVNGGGFEMDFEPQEGLSFGISKMSI 176
Query: 69 XXXXASSGIAQYAIPNGMGAVAGEHPYGEHPSRTLFVRNINSNVEDSELRILFEQYGDIR 128
AS+GI YAIPNG+G VAGEHPYGEHPSRTLFVRNINSNVEDSELR LFEQYGDIR
Sbjct: 177 SDGIASNGIGPYAIPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRTLFEQYGDIR 236
Query: 129 TLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTL 188
TLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTL
Sbjct: 237 TLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTL 296
Query: 189 VVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIA 248
VVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAA+AALKALNRSDIA
Sbjct: 297 VVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAADAALKALNRSDIA 356
Query: 249 GKRIKLEPSRPGGARRNLMQQLSQELEQDETRTFRHQVGSPLANSPPGNWAHFGSPIEPN 308
GKRIKLEPSRPGGARRNLMQQLSQELEQDE RTFR QVGSP+ANSPPG+WAHFGSP++PN
Sbjct: 357 GKRIKLEPSRPGGARRNLMQQLSQELEQDEARTFRSQVGSPIANSPPGSWAHFGSPVDPN 416
Query: 309 PLGSFSKSPGLGHASPMSTNHLSGLAALLSPHTSSPTKVAPIGKDPRRVTHQLF---ANS 365
PLGS+SKSPGLGHASP TNHLSGLAA+LSPHTS+ K+APIGKDP RV++Q+F ANS
Sbjct: 417 PLGSYSKSPGLGHASP--TNHLSGLAAILSPHTSTSPKIAPIGKDPGRVSNQMFTNSANS 474
Query: 366 GSTLGAAFQHSMSFPEQKVNATPRPXXXXXXXXXXXXXXXXXXXPQFLWGSPTPYSEHPK 425
GST G AFQHS+SFPE+ VN +PRP PQFLWGSPTPYSE+
Sbjct: 475 GSTQGVAFQHSISFPEKNVNVSPRPISAFGESNSSSSSVGTLSGPQFLWGSPTPYSENSN 534
Query: 426 TSAWSSSSLGHPFTSSDRRQGFPYTSHHSPFLGSQQHHQVGSAPSGLPLDRHFSYFPESP 485
TSAWSSSSLGHPFTSS +RQGFPYT H +PFLGSQ HH VGSAPSGLPL+R+F YFPESP
Sbjct: 535 TSAWSSSSLGHPFTSSAQRQGFPYTGHRNPFLGSQHHHHVGSAPSGLPLERNFRYFPESP 594
Query: 486 DASLMSPVGFGNLNHGDGNFMVNMGARASVGVSVGLSGTNTEIISPNFRMMSPLPRHGSL 545
DASLMSP+GFGN N GDGNFM+NMG+R+S G +GLS T +EI SPNF MMS LP HGSL
Sbjct: 595 DASLMSPIGFGNSNRGDGNFMMNMGSRSSAGHGIGLSATTSEIGSPNFGMMS-LPGHGSL 653
Query: 546 FLGNGSYTGPGATTIEGLAERARSRRPDNNGNQMDSKKLYQLDLEKIISGEDTRTTLMIK 605
FLGN Y GPG ++IEG ER RSRRPDN NQ++SKKLYQLDL+KI++GEDTRTTLMIK
Sbjct: 654 FLGNSLYAGPGVSSIEGFGERGRSRRPDNIVNQVESKKLYQLDLDKIVNGEDTRTTLMIK 713
Query: 606 NIPNKYTSKMLLAAIDENHCGTYDFVYLPIDFKNKCNVGYAFINMVSPSHIVPFFKAFNG 665
NIPNKYTSKMLLAAIDENH GTYDF+YLPIDFKNKCNVGYAFINMVSPSHIV FFKAFNG
Sbjct: 714 NIPNKYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVAFFKAFNG 773
Query: 666 KKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQGTGDQEHLL 725
KKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQ T DQEH L
Sbjct: 774 KKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQEHFL 833
Query: 726 SSNLNICIRQPDGSYTGDLLESPKGNLDEKLEKD 759
SSNLNICIRQPDGSY+GD+LESPKGN D+ LE++
Sbjct: 834 SSNLNICIRQPDGSYSGDMLESPKGNSDDNLERE 867
>Medtr3g448370.2 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16171071-16165028 | 20130731
Length = 853
Score = 1258 bits (3254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/754 (82%), Positives = 663/754 (87%), Gaps = 6/754 (0%)
Query: 9 LLPDDEDELLAGIMDDFDLTRLPIQLEDLDENDLFANGGGFEMDFEPQXXXXXXXXXXXX 68
+LPDDEDELLAGIMDDFDL RLP QLEDLDENDLF NGGGFEMDFEPQ
Sbjct: 103 MLPDDEDELLAGIMDDFDLRRLPNQLEDLDENDLFVNGGGFEMDFEPQEGLSFGISKMSI 162
Query: 69 XXXXASSGIAQYAIPNGMGAVAGEHPYGEHPSRTLFVRNINSNVEDSELRILFEQYGDIR 128
AS+GI YAIPNG+G VAGEHPYGEHPSRTLFVRNINSNVEDSELR LFEQYGDIR
Sbjct: 163 SDGIASNGIGPYAIPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRTLFEQYGDIR 222
Query: 129 TLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTL 188
TLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTL
Sbjct: 223 TLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTL 282
Query: 189 VVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIA 248
VVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAA+AALKALNRSDIA
Sbjct: 283 VVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAADAALKALNRSDIA 342
Query: 249 GKRIKLEPSRPGGARRNLMQQLSQELEQDETRTFRHQVGSPLANSPPGNWAHFGSPIEPN 308
GKRIKLEPSRPGGARRNLMQQLSQELEQDE RTFR QVGSP+ANSPPG+WAHFGSP++PN
Sbjct: 343 GKRIKLEPSRPGGARRNLMQQLSQELEQDEARTFRSQVGSPIANSPPGSWAHFGSPVDPN 402
Query: 309 PLGSFSKSPGLGHASPMSTNHLSGLAALLSPHTSSPTKVAPIGKDPRRVTHQLF---ANS 365
PLGS+SKSPGLGHASP TNHLSGLAA+LSPHTS+ K+APIGKDP RV++Q+F ANS
Sbjct: 403 PLGSYSKSPGLGHASP--TNHLSGLAAILSPHTSTSPKIAPIGKDPGRVSNQMFTNSANS 460
Query: 366 GSTLGAAFQHSMSFPEQKVNATPRPXXXXXXXXXXXXXXXXXXXPQFLWGSPTPYSEHPK 425
GST G AFQHS+SFPE+ VN +PRP PQFLWGSPTPYSE+
Sbjct: 461 GSTQGVAFQHSISFPEKNVNVSPRPISAFGESNSSSSSVGTLSGPQFLWGSPTPYSENSN 520
Query: 426 TSAWSSSSLGHPFTSSDRRQGFPYTSHHSPFLGSQQHHQVGSAPSGLPLDRHFSYFPESP 485
TSAWSSSSLGHPFTSS +RQGFPYT H +PFLGSQ HH VGSAPSGLPL+R+F YFPESP
Sbjct: 521 TSAWSSSSLGHPFTSSAQRQGFPYTGHRNPFLGSQHHHHVGSAPSGLPLERNFRYFPESP 580
Query: 486 DASLMSPVGFGNLNHGDGNFMVNMGARASVGVSVGLSGTNTEIISPNFRMMSPLPRHGSL 545
DASLMSP+GFGN N GDGNFM+NMG+R+S G +GLS T +EI SPNF MMS LP HGSL
Sbjct: 581 DASLMSPIGFGNSNRGDGNFMMNMGSRSSAGHGIGLSATTSEIGSPNFGMMS-LPGHGSL 639
Query: 546 FLGNGSYTGPGATTIEGLAERARSRRPDNNGNQMDSKKLYQLDLEKIISGEDTRTTLMIK 605
FLGN Y GPG ++IEG ER RSRRPDN NQ++SKKLYQLDL+KI++GEDTRTTLMIK
Sbjct: 640 FLGNSLYAGPGVSSIEGFGERGRSRRPDNIVNQVESKKLYQLDLDKIVNGEDTRTTLMIK 699
Query: 606 NIPNKYTSKMLLAAIDENHCGTYDFVYLPIDFKNKCNVGYAFINMVSPSHIVPFFKAFNG 665
NIPNKYTSKMLLAAIDENH GTYDF+YLPIDFKNKCNVGYAFINMVSPSHIV FFKAFNG
Sbjct: 700 NIPNKYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVAFFKAFNG 759
Query: 666 KKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQGTGDQEHLL 725
KKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQ T DQEH L
Sbjct: 760 KKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQEHFL 819
Query: 726 SSNLNICIRQPDGSYTGDLLESPKGNLDEKLEKD 759
SSNLNICIRQPDGSY+GD+LESPKGN D+ LE++
Sbjct: 820 SSNLNICIRQPDGSYSGDMLESPKGNSDDNLERE 853
>Medtr3g448370.3 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16170586-16165028 | 20130731
Length = 751
Score = 1257 bits (3253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 621/754 (82%), Positives = 663/754 (87%), Gaps = 6/754 (0%)
Query: 9 LLPDDEDELLAGIMDDFDLTRLPIQLEDLDENDLFANGGGFEMDFEPQXXXXXXXXXXXX 68
+LPDDEDELLAGIMDDFDL RLP QLEDLDENDLF NGGGFEMDFEPQ
Sbjct: 1 MLPDDEDELLAGIMDDFDLRRLPNQLEDLDENDLFVNGGGFEMDFEPQEGLSFGISKMSI 60
Query: 69 XXXXASSGIAQYAIPNGMGAVAGEHPYGEHPSRTLFVRNINSNVEDSELRILFEQYGDIR 128
AS+GI YAIPNG+G VAGEHPYGEHPSRTLFVRNINSNVEDSELR LFEQYGDIR
Sbjct: 61 SDGIASNGIGPYAIPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRTLFEQYGDIR 120
Query: 129 TLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTL 188
TLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTL
Sbjct: 121 TLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTL 180
Query: 189 VVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIA 248
VVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAA+AALKALNRSDIA
Sbjct: 181 VVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAADAALKALNRSDIA 240
Query: 249 GKRIKLEPSRPGGARRNLMQQLSQELEQDETRTFRHQVGSPLANSPPGNWAHFGSPIEPN 308
GKRIKLEPSRPGGARRNLMQQLSQELEQDE RTFR QVGSP+ANSPPG+WAHFGSP++PN
Sbjct: 241 GKRIKLEPSRPGGARRNLMQQLSQELEQDEARTFRSQVGSPIANSPPGSWAHFGSPVDPN 300
Query: 309 PLGSFSKSPGLGHASPMSTNHLSGLAALLSPHTSSPTKVAPIGKDPRRVTHQLF---ANS 365
PLGS+SKSPGLGHASP TNHLSGLAA+LSPHTS+ K+APIGKDP RV++Q+F ANS
Sbjct: 301 PLGSYSKSPGLGHASP--TNHLSGLAAILSPHTSTSPKIAPIGKDPGRVSNQMFTNSANS 358
Query: 366 GSTLGAAFQHSMSFPEQKVNATPRPXXXXXXXXXXXXXXXXXXXPQFLWGSPTPYSEHPK 425
GST G AFQHS+SFPE+ VN +PRP PQFLWGSPTPYSE+
Sbjct: 359 GSTQGVAFQHSISFPEKNVNVSPRPISAFGESNSSSSSVGTLSGPQFLWGSPTPYSENSN 418
Query: 426 TSAWSSSSLGHPFTSSDRRQGFPYTSHHSPFLGSQQHHQVGSAPSGLPLDRHFSYFPESP 485
TSAWSSSSLGHPFTSS +RQGFPYT H +PFLGSQ HH VGSAPSGLPL+R+F YFPESP
Sbjct: 419 TSAWSSSSLGHPFTSSAQRQGFPYTGHRNPFLGSQHHHHVGSAPSGLPLERNFRYFPESP 478
Query: 486 DASLMSPVGFGNLNHGDGNFMVNMGARASVGVSVGLSGTNTEIISPNFRMMSPLPRHGSL 545
DASLMSP+GFGN N GDGNFM+NMG+R+S G +GLS T +EI SPNF MMS LP HGSL
Sbjct: 479 DASLMSPIGFGNSNRGDGNFMMNMGSRSSAGHGIGLSATTSEIGSPNFGMMS-LPGHGSL 537
Query: 546 FLGNGSYTGPGATTIEGLAERARSRRPDNNGNQMDSKKLYQLDLEKIISGEDTRTTLMIK 605
FLGN Y GPG ++IEG ER RSRRPDN NQ++SKKLYQLDL+KI++GEDTRTTLMIK
Sbjct: 538 FLGNSLYAGPGVSSIEGFGERGRSRRPDNIVNQVESKKLYQLDLDKIVNGEDTRTTLMIK 597
Query: 606 NIPNKYTSKMLLAAIDENHCGTYDFVYLPIDFKNKCNVGYAFINMVSPSHIVPFFKAFNG 665
NIPNKYTSKMLLAAIDENH GTYDF+YLPIDFKNKCNVGYAFINMVSPSHIV FFKAFNG
Sbjct: 598 NIPNKYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVAFFKAFNG 657
Query: 666 KKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQGTGDQEHLL 725
KKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQ T DQEH L
Sbjct: 658 KKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQEHFL 717
Query: 726 SSNLNICIRQPDGSYTGDLLESPKGNLDEKLEKD 759
SSNLNICIRQPDGSY+GD+LESPKGN D+ LE++
Sbjct: 718 SSNLNICIRQPDGSYSGDMLESPKGNSDDNLERE 751
>Medtr3g448370.5 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16171071-16165361 | 20130731
Length = 876
Score = 1193 bits (3086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/716 (82%), Positives = 628/716 (87%), Gaps = 6/716 (0%)
Query: 9 LLPDDEDELLAGIMDDFDLTRLPIQLEDLDENDLFANGGGFEMDFEPQXXXXXXXXXXXX 68
+LPDDEDELLAGIMDDFDL RLP QLEDLDENDLF NGGGFEMDFEPQ
Sbjct: 106 MLPDDEDELLAGIMDDFDLRRLPNQLEDLDENDLFVNGGGFEMDFEPQEGLSFGISKMSI 165
Query: 69 XXXXASSGIAQYAIPNGMGAVAGEHPYGEHPSRTLFVRNINSNVEDSELRILFEQYGDIR 128
AS+GI YAIPNG+G VAGEHPYGEHPSRTLFVRNINSNVEDSELR LFEQYGDIR
Sbjct: 166 SDGIASNGIGPYAIPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRTLFEQYGDIR 225
Query: 129 TLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTL 188
TLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTL
Sbjct: 226 TLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTL 285
Query: 189 VVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIA 248
VVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAA+AALKALNRSDIA
Sbjct: 286 VVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAADAALKALNRSDIA 345
Query: 249 GKRIKLEPSRPGGARRNLMQQLSQELEQDETRTFRHQVGSPLANSPPGNWAHFGSPIEPN 308
GKRIKLEPSRPGGARRNLMQQLSQELEQDE RTFR QVGSP+ANSPPG+WAHFGSP++PN
Sbjct: 346 GKRIKLEPSRPGGARRNLMQQLSQELEQDEARTFRSQVGSPIANSPPGSWAHFGSPVDPN 405
Query: 309 PLGSFSKSPGLGHASPMSTNHLSGLAALLSPHTSSPTKVAPIGKDPRRVTHQLF---ANS 365
PLGS+SKSPGLGHASP TNHLSGLAA+LSPHTS+ K+APIGKDP RV++Q+F ANS
Sbjct: 406 PLGSYSKSPGLGHASP--TNHLSGLAAILSPHTSTSPKIAPIGKDPGRVSNQMFTNSANS 463
Query: 366 GSTLGAAFQHSMSFPEQKVNATPRPXXXXXXXXXXXXXXXXXXXPQFLWGSPTPYSEHPK 425
GST G AFQHS+SFPE+ VN +PRP PQFLWGSPTPYSE+
Sbjct: 464 GSTQGVAFQHSISFPEKNVNVSPRPISAFGESNSSSSSVGTLSGPQFLWGSPTPYSENSN 523
Query: 426 TSAWSSSSLGHPFTSSDRRQGFPYTSHHSPFLGSQQHHQVGSAPSGLPLDRHFSYFPESP 485
TSAWSSSSLGHPFTSS +RQGFPYT H +PFLGSQ HH VGSAPSGLPL+R+F YFPESP
Sbjct: 524 TSAWSSSSLGHPFTSSAQRQGFPYTGHRNPFLGSQHHHHVGSAPSGLPLERNFRYFPESP 583
Query: 486 DASLMSPVGFGNLNHGDGNFMVNMGARASVGVSVGLSGTNTEIISPNFRMMSPLPRHGSL 545
DASLMSP+GFGN N GDGNFM+NMG+R+S G +GLS T +EI SPNF MMS LP HGSL
Sbjct: 584 DASLMSPIGFGNSNRGDGNFMMNMGSRSSAGHGIGLSATTSEIGSPNFGMMS-LPGHGSL 642
Query: 546 FLGNGSYTGPGATTIEGLAERARSRRPDNNGNQMDSKKLYQLDLEKIISGEDTRTTLMIK 605
FLGN Y GPG ++IEG ER RSRRPDN NQ++SKKLYQLDL+KI++GEDTRTTLMIK
Sbjct: 643 FLGNSLYAGPGVSSIEGFGERGRSRRPDNIVNQVESKKLYQLDLDKIVNGEDTRTTLMIK 702
Query: 606 NIPNKYTSKMLLAAIDENHCGTYDFVYLPIDFKNKCNVGYAFINMVSPSHIVPFFKAFNG 665
NIPNKYTSKMLLAAIDENH GTYDF+YLPIDFKNKCNVGYAFINMVSPSHIV FFKAFNG
Sbjct: 703 NIPNKYTSKMLLAAIDENHQGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIVAFFKAFNG 762
Query: 666 KKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQGTGDQ 721
KKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQ T DQ
Sbjct: 763 KKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQDTSDQ 818
>Medtr2g049640.2 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr2:21883965-21877390 | 20130731
Length = 865
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/744 (64%), Positives = 558/744 (75%), Gaps = 18/744 (2%)
Query: 5 AIGNLLPDDEDELLAGIMDDFDLTRLPIQLEDLDENDLFANGGGFEMDFEPQXXXXXXXX 64
AIG +LPDD++ELLAGIMDDFDL LP LEDL+E DLF + GG E++ +PQ
Sbjct: 98 AIGTMLPDDDEELLAGIMDDFDLRGLPGSLEDLEEYDLFDSSGGLELETDPQESLSVGIS 157
Query: 65 XXXXXXXXASSGIAQYAIPNGMGAVAG--EHPYGEHPSRTLFVRNINSNVEDSELRILFE 122
+ + Y++PNG+G A EHPYGEHPSRTLFVRNINSNVED+ELR LFE
Sbjct: 158 KLSLSDSSVGNSMPPYSLPNGVGGGAVAGEHPYGEHPSRTLFVRNINSNVEDTELRTLFE 217
Query: 123 QYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKD 182
QYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPS+KD
Sbjct: 218 QYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKD 277
Query: 183 INQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKAL 242
INQGTLVVFNLDPSVSN+DLRQIFGAYGEVKEIRETPHKRHHKFIE+YDVRAAEAALK+L
Sbjct: 278 INQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSL 337
Query: 243 NRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDETRTFRHQVGSPLANSPPGNWAHFG 302
NRSDIAGKRIKLEPSRPGGARRNLM QL+QEL+QDE+R+FR+QVGSPLA SPPGNW F
Sbjct: 338 NRSDIAGKRIKLEPSRPGGARRNLMLQLNQELDQDESRSFRYQVGSPLAGSPPGNWLQFN 397
Query: 303 SPIEPNPLGSFSKSPGLGHASPMSTNHLSGLAALLSPHTSSPTKVAPIGKDPRRVTH--Q 360
SPIE + L + + SPG SP ++NHL GLA++L P S+ K A IG+D R +H
Sbjct: 398 SPIEQSSLPNLNHSPGSKIMSPTTSNHLPGLASILQPQLSNTVKAATIGQDIGRSSHGDH 457
Query: 361 LFANSGSTLGAAFQHSMSFPEQKVNATPRPXXXXXXXXXXXXXXXXXXXPQFLWGSPTPY 420
+F N S+ G+ F +S S PE K + PQFLWGSP
Sbjct: 458 IFPNKISSAGSNF-NSHSLPEPKFSPYRGALSSFGASTSNGSSVETLTAPQFLWGSPNLS 516
Query: 421 SEHPKTSAWSSSSLGHPFTSSD-RRQGFPYTSHHSPFL----GSQQHHQVGSAPSGLPLD 475
SE K SAW S+GH ++S+ FPY+S ++ F+ HH VGSAPSGLP +
Sbjct: 517 SEPTKPSAWPRPSVGHQLSTSNGTSHAFPYSSQNNSFVSSSQQQHHHHHVGSAPSGLPFE 576
Query: 476 RHFSYFPESPDASLMSPVGFG--NLNHGDGNFMVNMGARASVGVSVGLSGTNTEIISPNF 533
RHF +FP+S + SLM+ VG+ L H DGN+M+N G +VG+S+ + + S NF
Sbjct: 577 RHFGFFPKSSETSLMNNVGYRGMGLGHNDGNYMLNSGISGNVGISIPRNMPDNG--SSNF 634
Query: 534 RMMSPLPRHGSLFLGNGSYTGPGATTIEGLAERARSRRPDNNGNQMDSKKLYQLDLEKII 593
RM S P +FLGNG Y G T +E +R RSR DNNG+Q+D+KKL+QLDL+KI
Sbjct: 635 RMRSS-PILSPVFLGNGPYPGLLPTAMESFTDRVRSRWIDNNGSQVDNKKLFQLDLDKIR 693
Query: 594 SGEDTRTTLMIKNIPNKYTSKMLLAAIDENHCGTYDFVYLPIDFKNKCNVGYAFINMVSP 653
SGEDTRTTLMIKNIPNKYTSKMLLAAIDENH GTYDF+YLPIDFKNKCNVGYAFINM+SP
Sbjct: 694 SGEDTRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLPIDFKNKCNVGYAFINMLSP 753
Query: 654 SHIVPFFKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHS 713
S I+PF++ F+GKKWEKFNSEKVASLAYARIQGK ALV HFQNSSLMNEDKRCRPI+FHS
Sbjct: 754 SLIIPFYETFHGKKWEKFNSEKVASLAYARIQGKNALVNHFQNSSLMNEDKRCRPIVFHS 813
Query: 714 EGQGTGD---QEHLLSSNLNICIR 734
+G D QEHL S++ N+ I+
Sbjct: 814 DGSEVADQIVQEHLPSNSNNMYIQ 837
>Medtr2g049640.1 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr2:21883858-21877390 | 20130731
Length = 865
Score = 912 bits (2356), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/744 (64%), Positives = 558/744 (75%), Gaps = 18/744 (2%)
Query: 5 AIGNLLPDDEDELLAGIMDDFDLTRLPIQLEDLDENDLFANGGGFEMDFEPQXXXXXXXX 64
AIG +LPDD++ELLAGIMDDFDL LP LEDL+E DLF + GG E++ +PQ
Sbjct: 98 AIGTMLPDDDEELLAGIMDDFDLRGLPGSLEDLEEYDLFDSSGGLELETDPQESLSVGIS 157
Query: 65 XXXXXXXXASSGIAQYAIPNGMGAVAG--EHPYGEHPSRTLFVRNINSNVEDSELRILFE 122
+ + Y++PNG+G A EHPYGEHPSRTLFVRNINSNVED+ELR LFE
Sbjct: 158 KLSLSDSSVGNSMPPYSLPNGVGGGAVAGEHPYGEHPSRTLFVRNINSNVEDTELRTLFE 217
Query: 123 QYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKD 182
QYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPS+KD
Sbjct: 218 QYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKD 277
Query: 183 INQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKAL 242
INQGTLVVFNLDPSVSN+DLRQIFGAYGEVKEIRETPHKRHHKFIE+YDVRAAEAALK+L
Sbjct: 278 INQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSL 337
Query: 243 NRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDETRTFRHQVGSPLANSPPGNWAHFG 302
NRSDIAGKRIKLEPSRPGGARRNLM QL+QEL+QDE+R+FR+QVGSPLA SPPGNW F
Sbjct: 338 NRSDIAGKRIKLEPSRPGGARRNLMLQLNQELDQDESRSFRYQVGSPLAGSPPGNWLQFN 397
Query: 303 SPIEPNPLGSFSKSPGLGHASPMSTNHLSGLAALLSPHTSSPTKVAPIGKDPRRVTH--Q 360
SPIE + L + + SPG SP ++NHL GLA++L P S+ K A IG+D R +H
Sbjct: 398 SPIEQSSLPNLNHSPGSKIMSPTTSNHLPGLASILQPQLSNTVKAATIGQDIGRSSHGDH 457
Query: 361 LFANSGSTLGAAFQHSMSFPEQKVNATPRPXXXXXXXXXXXXXXXXXXXPQFLWGSPTPY 420
+F N S+ G+ F +S S PE K + PQFLWGSP
Sbjct: 458 IFPNKISSAGSNF-NSHSLPEPKFSPYRGALSSFGASTSNGSSVETLTAPQFLWGSPNLS 516
Query: 421 SEHPKTSAWSSSSLGHPFTSSD-RRQGFPYTSHHSPFL----GSQQHHQVGSAPSGLPLD 475
SE K SAW S+GH ++S+ FPY+S ++ F+ HH VGSAPSGLP +
Sbjct: 517 SEPTKPSAWPRPSVGHQLSTSNGTSHAFPYSSQNNSFVSSSQQQHHHHHVGSAPSGLPFE 576
Query: 476 RHFSYFPESPDASLMSPVGFG--NLNHGDGNFMVNMGARASVGVSVGLSGTNTEIISPNF 533
RHF +FP+S + SLM+ VG+ L H DGN+M+N G +VG+S+ + + S NF
Sbjct: 577 RHFGFFPKSSETSLMNNVGYRGMGLGHNDGNYMLNSGISGNVGISIPRNMPDNG--SSNF 634
Query: 534 RMMSPLPRHGSLFLGNGSYTGPGATTIEGLAERARSRRPDNNGNQMDSKKLYQLDLEKII 593
RM S P +FLGNG Y G T +E +R RSR DNNG+Q+D+KKL+QLDL+KI
Sbjct: 635 RMRSS-PILSPVFLGNGPYPGLLPTAMESFTDRVRSRWIDNNGSQVDNKKLFQLDLDKIR 693
Query: 594 SGEDTRTTLMIKNIPNKYTSKMLLAAIDENHCGTYDFVYLPIDFKNKCNVGYAFINMVSP 653
SGEDTRTTLMIKNIPNKYTSKMLLAAIDENH GTYDF+YLPIDFKNKCNVGYAFINM+SP
Sbjct: 694 SGEDTRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLPIDFKNKCNVGYAFINMLSP 753
Query: 654 SHIVPFFKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMNEDKRCRPILFHS 713
S I+PF++ F+GKKWEKFNSEKVASLAYARIQGK ALV HFQNSSLMNEDKRCRPI+FHS
Sbjct: 754 SLIIPFYETFHGKKWEKFNSEKVASLAYARIQGKNALVNHFQNSSLMNEDKRCRPIVFHS 813
Query: 714 EGQGTGD---QEHLLSSNLNICIR 734
+G D QEHL S++ N+ I+
Sbjct: 814 DGSEVADQIVQEHLPSNSNNMYIQ 837
>Medtr3g098620.5 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45044608-45037623 | 20130731
Length = 923
Score = 269 bits (687), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/278 (52%), Positives = 185/278 (66%), Gaps = 17/278 (6%)
Query: 1 METNAIGNLLPDDEDELLAGIMDDFDLTRLPIQLEDLDENDLFANGGGFEMDFEPQXXXX 60
+E + IG+LLPD ED+L +G+ D + +D ++ DLF++GGG E++ +
Sbjct: 184 IEADTIGDLLPD-EDDLFSGVTDGLGGSAHARASDDFEDFDLFSSGGGMELEGDELSASG 242
Query: 61 XXXXXXXXXXXXASSGIAQYAIPNGMGAVAGEHPYGEHPSRTLFVRNINSNVEDSELRIL 120
SG+ P GA G+ +GE SRTLFV NI SN EDSEL+ L
Sbjct: 243 KRI-----------SGLD--GDPAYSGAFKGKSSFGEQSSRTLFVGNITSNAEDSELKAL 289
Query: 121 FEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSE 180
FEQYGDIRTLYTACKHRGFVMISYYD+RAA+ AM+ALQN+ L RKLDI +SIPK NP+E
Sbjct: 290 FEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMKALQNRTLSSRKLDIRYSIPKGNPTE 349
Query: 181 KDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALK 240
KDI GTL++ LD +V D+L++IFG YGE+KEI E P H K+IEFYDVR AEA+L+
Sbjct: 350 KDIGHGTLMISGLDSAVLKDELKRIFGFYGEIKEIYEYPEMNHIKYIEFYDVRGAEASLR 409
Query: 241 ALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDE 278
+LN +AGK IKLEP P A R M Q SQ+ QDE
Sbjct: 410 SLNGICLAGKHIKLEPGHPRNAIR--MTQPSQK-GQDE 444
Score = 254 bits (648), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 149/271 (54%), Positives = 173/271 (63%), Gaps = 28/271 (10%)
Query: 463 HQVGSAP--SGLPLDRHFSYFPESPDASLMSPVGFGNLN-HGDG-----NFMVNMGARAS 514
H VGSAP +G P +R SY ESPDA GN HG + NM +
Sbjct: 659 HHVGSAPVVTGSPWERQHSYLGESPDAPGFRLGSLGNAGFHGSWQLHPPDLSSNMFSHI- 717
Query: 515 VGVSVGLSGTNTEIISPNFRMMSP--LPRHGSLFLGNGSYTGPGATTIEGLAERARS--- 569
G N ++ N SP LP +F G T + + ER R+
Sbjct: 718 --------GGNGNDLTSNVGHGSPKQLPH---VFPGRLPMTS--MSKFDSTNERMRNFYH 764
Query: 570 RRPDNNGNQMDSKKLYQLDLEKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHCGTYD 629
RR + N N D KK ++LDL +I GED RTTLMIKNIPNKYTSKMLL AIDE+ GTYD
Sbjct: 765 RRSEANNNNAD-KKQFELDLGRISRGEDNRTTLMIKNIPNKYTSKMLLTAIDESCRGTYD 823
Query: 630 FVYLPIDFKNKCNVGYAFINMVSPSHIVPFFKAFNGKKWEKFNSEKVASLAYARIQGKAA 689
F+YLPIDFKNKCNVGYAFINM+ P I+PF +AF+GKKWEKFNSEKVA LAYARIQGK+A
Sbjct: 824 FLYLPIDFKNKCNVGYAFINMIDPGQIIPFHQAFHGKKWEKFNSEKVAVLAYARIQGKSA 883
Query: 690 LVMHFQNSSLMNEDKRCRPILFHSEGQGTGD 720
L+ HFQNSSLMNEDKRCRPILFH++G GD
Sbjct: 884 LIAHFQNSSLMNEDKRCRPILFHTDGPNAGD 914
>Medtr3g098620.4 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45043643-45036753 | 20130731
Length = 969
Score = 268 bits (686), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/278 (52%), Positives = 185/278 (66%), Gaps = 17/278 (6%)
Query: 1 METNAIGNLLPDDEDELLAGIMDDFDLTRLPIQLEDLDENDLFANGGGFEMDFEPQXXXX 60
+E + IG+LLPD ED+L +G+ D + +D ++ DLF++GGG E++ +
Sbjct: 184 IEADTIGDLLPD-EDDLFSGVTDGLGGSAHARASDDFEDFDLFSSGGGMELEGDELSASG 242
Query: 61 XXXXXXXXXXXXASSGIAQYAIPNGMGAVAGEHPYGEHPSRTLFVRNINSNVEDSELRIL 120
SG+ P GA G+ +GE SRTLFV NI SN EDSEL+ L
Sbjct: 243 KRI-----------SGLD--GDPAYSGAFKGKSSFGEQSSRTLFVGNITSNAEDSELKAL 289
Query: 121 FEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSE 180
FEQYGDIRTLYTACKHRGFVMISYYD+RAA+ AM+ALQN+ L RKLDI +SIPK NP+E
Sbjct: 290 FEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMKALQNRTLSSRKLDIRYSIPKGNPTE 349
Query: 181 KDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALK 240
KDI GTL++ LD +V D+L++IFG YGE+KEI E P H K+IEFYDVR AEA+L+
Sbjct: 350 KDIGHGTLMISGLDSAVLKDELKRIFGFYGEIKEIYEYPEMNHIKYIEFYDVRGAEASLR 409
Query: 241 ALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDE 278
+LN +AGK IKLEP P A R M Q SQ+ QDE
Sbjct: 410 SLNGICLAGKHIKLEPGHPRNAIR--MTQPSQK-GQDE 444
Score = 256 bits (653), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 152/283 (53%), Positives = 179/283 (63%), Gaps = 29/283 (10%)
Query: 463 HQVGSAP--SGLPLDRHFSYFPESPDASLMSPVGFGNLN-HGDG-----NFMVNMGARAS 514
H VGSAP +G P +R SY ESPDA GN HG + NM +
Sbjct: 659 HHVGSAPVVTGSPWERQHSYLGESPDAPGFRLGSLGNAGFHGSWQLHPPDLSSNMFSHI- 717
Query: 515 VGVSVGLSGTNTEIISPNFRMMSP--LPRHGSLFLGNGSYTGPGATTIEGLAERARS--- 569
G N ++ N SP LP +F G T + + ER R+
Sbjct: 718 --------GGNGNDLTSNVGHGSPKQLPH---VFPGRLPMTS--MSKFDSTNERMRNFYH 764
Query: 570 RRPDNNGNQMDSKKLYQLDLEKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHCGTYD 629
RR + N N D KK ++LDL +I GED RTTLMIKNIPNKYTSKMLL AIDE+ GTYD
Sbjct: 765 RRSEANNNNAD-KKQFELDLGRISRGEDNRTTLMIKNIPNKYTSKMLLTAIDESCRGTYD 823
Query: 630 FVYLPIDFKNKCNVGYAFINMVSPSHIVPFFKAFNGKKWEKFNSEKVASLAYARIQGKAA 689
F+YLPIDFKNKCNVGYAFINM+ P I+PF +AF+GKKWEKFNSEKVA LAYARIQGK+A
Sbjct: 824 FLYLPIDFKNKCNVGYAFINMIDPGQIIPFHQAFHGKKWEKFNSEKVAVLAYARIQGKSA 883
Query: 690 LVMHFQNSSLMNEDKRCRPILFHSEGQGTGDQEHL-LSSNLNI 731
L+ HFQNSSLMNEDKRCRPILFH++G GD E L +N+ +
Sbjct: 884 LIAHFQNSSLMNEDKRCRPILFHTDGPNAGDPEPFPLGANIRV 926
>Medtr3g098620.1 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45044608-45036736 | 20130731
Length = 969
Score = 268 bits (686), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/278 (52%), Positives = 185/278 (66%), Gaps = 17/278 (6%)
Query: 1 METNAIGNLLPDDEDELLAGIMDDFDLTRLPIQLEDLDENDLFANGGGFEMDFEPQXXXX 60
+E + IG+LLPD ED+L +G+ D + +D ++ DLF++GGG E++ +
Sbjct: 184 IEADTIGDLLPD-EDDLFSGVTDGLGGSAHARASDDFEDFDLFSSGGGMELEGDELSASG 242
Query: 61 XXXXXXXXXXXXASSGIAQYAIPNGMGAVAGEHPYGEHPSRTLFVRNINSNVEDSELRIL 120
SG+ P GA G+ +GE SRTLFV NI SN EDSEL+ L
Sbjct: 243 KRI-----------SGLD--GDPAYSGAFKGKSSFGEQSSRTLFVGNITSNAEDSELKAL 289
Query: 121 FEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSE 180
FEQYGDIRTLYTACKHRGFVMISYYD+RAA+ AM+ALQN+ L RKLDI +SIPK NP+E
Sbjct: 290 FEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMKALQNRTLSSRKLDIRYSIPKGNPTE 349
Query: 181 KDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALK 240
KDI GTL++ LD +V D+L++IFG YGE+KEI E P H K+IEFYDVR AEA+L+
Sbjct: 350 KDIGHGTLMISGLDSAVLKDELKRIFGFYGEIKEIYEYPEMNHIKYIEFYDVRGAEASLR 409
Query: 241 ALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDE 278
+LN +AGK IKLEP P A R M Q SQ+ QDE
Sbjct: 410 SLNGICLAGKHIKLEPGHPRNAIR--MTQPSQK-GQDE 444
Score = 256 bits (653), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 152/283 (53%), Positives = 179/283 (63%), Gaps = 29/283 (10%)
Query: 463 HQVGSAP--SGLPLDRHFSYFPESPDASLMSPVGFGNLN-HGDG-----NFMVNMGARAS 514
H VGSAP +G P +R SY ESPDA GN HG + NM +
Sbjct: 659 HHVGSAPVVTGSPWERQHSYLGESPDAPGFRLGSLGNAGFHGSWQLHPPDLSSNMFSHI- 717
Query: 515 VGVSVGLSGTNTEIISPNFRMMSP--LPRHGSLFLGNGSYTGPGATTIEGLAERARS--- 569
G N ++ N SP LP +F G T + + ER R+
Sbjct: 718 --------GGNGNDLTSNVGHGSPKQLPH---VFPGRLPMTS--MSKFDSTNERMRNFYH 764
Query: 570 RRPDNNGNQMDSKKLYQLDLEKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHCGTYD 629
RR + N N D KK ++LDL +I GED RTTLMIKNIPNKYTSKMLL AIDE+ GTYD
Sbjct: 765 RRSEANNNNAD-KKQFELDLGRISRGEDNRTTLMIKNIPNKYTSKMLLTAIDESCRGTYD 823
Query: 630 FVYLPIDFKNKCNVGYAFINMVSPSHIVPFFKAFNGKKWEKFNSEKVASLAYARIQGKAA 689
F+YLPIDFKNKCNVGYAFINM+ P I+PF +AF+GKKWEKFNSEKVA LAYARIQGK+A
Sbjct: 824 FLYLPIDFKNKCNVGYAFINMIDPGQIIPFHQAFHGKKWEKFNSEKVAVLAYARIQGKSA 883
Query: 690 LVMHFQNSSLMNEDKRCRPILFHSEGQGTGDQEHL-LSSNLNI 731
L+ HFQNSSLMNEDKRCRPILFH++G GD E L +N+ +
Sbjct: 884 LIAHFQNSSLMNEDKRCRPILFHTDGPNAGDPEPFPLGANIRV 926
>Medtr3g098620.3 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45044605-45036753 | 20130731
Length = 923
Score = 268 bits (686), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/278 (52%), Positives = 185/278 (66%), Gaps = 17/278 (6%)
Query: 1 METNAIGNLLPDDEDELLAGIMDDFDLTRLPIQLEDLDENDLFANGGGFEMDFEPQXXXX 60
+E + IG+LLPD ED+L +G+ D + +D ++ DLF++GGG E++ +
Sbjct: 184 IEADTIGDLLPD-EDDLFSGVTDGLGGSAHARASDDFEDFDLFSSGGGMELEGDELSASG 242
Query: 61 XXXXXXXXXXXXASSGIAQYAIPNGMGAVAGEHPYGEHPSRTLFVRNINSNVEDSELRIL 120
SG+ P GA G+ +GE SRTLFV NI SN EDSEL+ L
Sbjct: 243 KRI-----------SGLD--GDPAYSGAFKGKSSFGEQSSRTLFVGNITSNAEDSELKAL 289
Query: 121 FEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSE 180
FEQYGDIRTLYTACKHRGFVMISYYD+RAA+ AM+ALQN+ L RKLDI +SIPK NP+E
Sbjct: 290 FEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMKALQNRTLSSRKLDIRYSIPKGNPTE 349
Query: 181 KDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALK 240
KDI GTL++ LD +V D+L++IFG YGE+KEI E P H K+IEFYDVR AEA+L+
Sbjct: 350 KDIGHGTLMISGLDSAVLKDELKRIFGFYGEIKEIYEYPEMNHIKYIEFYDVRGAEASLR 409
Query: 241 ALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDE 278
+LN +AGK IKLEP P A R M Q SQ+ QDE
Sbjct: 410 SLNGICLAGKHIKLEPGHPRNAIR--MTQPSQK-GQDE 444
Score = 255 bits (652), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 151/276 (54%), Positives = 176/276 (63%), Gaps = 28/276 (10%)
Query: 463 HQVGSAP--SGLPLDRHFSYFPESPDASLMSPVGFGNLN-HGDG-----NFMVNMGARAS 514
H VGSAP +G P +R SY ESPDA GN HG + NM +
Sbjct: 659 HHVGSAPVVTGSPWERQHSYLGESPDAPGFRLGSLGNAGFHGSWQLHPPDLSSNMFSHI- 717
Query: 515 VGVSVGLSGTNTEIISPNFRMMSP--LPRHGSLFLGNGSYTGPGATTIEGLAERARS--- 569
G N ++ N SP LP +F G T + + ER R+
Sbjct: 718 --------GGNGNDLTSNVGHGSPKQLPH---VFPGRLPMTS--MSKFDSTNERMRNFYH 764
Query: 570 RRPDNNGNQMDSKKLYQLDLEKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHCGTYD 629
RR + N N D KK ++LDL +I GED RTTLMIKNIPNKYTSKMLL AIDE+ GTYD
Sbjct: 765 RRSEANNNNAD-KKQFELDLGRISRGEDNRTTLMIKNIPNKYTSKMLLTAIDESCRGTYD 823
Query: 630 FVYLPIDFKNKCNVGYAFINMVSPSHIVPFFKAFNGKKWEKFNSEKVASLAYARIQGKAA 689
F+YLPIDFKNKCNVGYAFINM+ P I+PF +AF+GKKWEKFNSEKVA LAYARIQGK+A
Sbjct: 824 FLYLPIDFKNKCNVGYAFINMIDPGQIIPFHQAFHGKKWEKFNSEKVAVLAYARIQGKSA 883
Query: 690 LVMHFQNSSLMNEDKRCRPILFHSEGQGTGDQEHLL 725
L+ HFQNSSLMNEDKRCRPILFH++G GD +LL
Sbjct: 884 LIAHFQNSSLMNEDKRCRPILFHTDGPNAGDPVNLL 919
>Medtr3g098620.2 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45044593-45036753 | 20130731
Length = 923
Score = 268 bits (686), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/278 (52%), Positives = 185/278 (66%), Gaps = 17/278 (6%)
Query: 1 METNAIGNLLPDDEDELLAGIMDDFDLTRLPIQLEDLDENDLFANGGGFEMDFEPQXXXX 60
+E + IG+LLPD ED+L +G+ D + +D ++ DLF++GGG E++ +
Sbjct: 184 IEADTIGDLLPD-EDDLFSGVTDGLGGSAHARASDDFEDFDLFSSGGGMELEGDELSASG 242
Query: 61 XXXXXXXXXXXXASSGIAQYAIPNGMGAVAGEHPYGEHPSRTLFVRNINSNVEDSELRIL 120
SG+ P GA G+ +GE SRTLFV NI SN EDSEL+ L
Sbjct: 243 KRI-----------SGLD--GDPAYSGAFKGKSSFGEQSSRTLFVGNITSNAEDSELKAL 289
Query: 121 FEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSE 180
FEQYGDIRTLYTACKHRGFVMISYYD+RAA+ AM+ALQN+ L RKLDI +SIPK NP+E
Sbjct: 290 FEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMKALQNRTLSSRKLDIRYSIPKGNPTE 349
Query: 181 KDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALK 240
KDI GTL++ LD +V D+L++IFG YGE+KEI E P H K+IEFYDVR AEA+L+
Sbjct: 350 KDIGHGTLMISGLDSAVLKDELKRIFGFYGEIKEIYEYPEMNHIKYIEFYDVRGAEASLR 409
Query: 241 ALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDE 278
+LN +AGK IKLEP P A R M Q SQ+ QDE
Sbjct: 410 SLNGICLAGKHIKLEPGHPRNAIR--MTQPSQK-GQDE 444
Score = 255 bits (652), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 151/276 (54%), Positives = 176/276 (63%), Gaps = 28/276 (10%)
Query: 463 HQVGSAP--SGLPLDRHFSYFPESPDASLMSPVGFGNLN-HGDG-----NFMVNMGARAS 514
H VGSAP +G P +R SY ESPDA GN HG + NM +
Sbjct: 659 HHVGSAPVVTGSPWERQHSYLGESPDAPGFRLGSLGNAGFHGSWQLHPPDLSSNMFSHI- 717
Query: 515 VGVSVGLSGTNTEIISPNFRMMSP--LPRHGSLFLGNGSYTGPGATTIEGLAERARS--- 569
G N ++ N SP LP +F G T + + ER R+
Sbjct: 718 --------GGNGNDLTSNVGHGSPKQLPH---VFPGRLPMTS--MSKFDSTNERMRNFYH 764
Query: 570 RRPDNNGNQMDSKKLYQLDLEKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHCGTYD 629
RR + N N D KK ++LDL +I GED RTTLMIKNIPNKYTSKMLL AIDE+ GTYD
Sbjct: 765 RRSEANNNNAD-KKQFELDLGRISRGEDNRTTLMIKNIPNKYTSKMLLTAIDESCRGTYD 823
Query: 630 FVYLPIDFKNKCNVGYAFINMVSPSHIVPFFKAFNGKKWEKFNSEKVASLAYARIQGKAA 689
F+YLPIDFKNKCNVGYAFINM+ P I+PF +AF+GKKWEKFNSEKVA LAYARIQGK+A
Sbjct: 824 FLYLPIDFKNKCNVGYAFINMIDPGQIIPFHQAFHGKKWEKFNSEKVAVLAYARIQGKSA 883
Query: 690 LVMHFQNSSLMNEDKRCRPILFHSEGQGTGDQEHLL 725
L+ HFQNSSLMNEDKRCRPILFH++G GD +LL
Sbjct: 884 LIAHFQNSSLMNEDKRCRPILFHTDGPNAGDPVNLL 919
>Medtr8g100160.1 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr8:40164328-40156696 | 20130731
Length = 964
Score = 264 bits (675), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/279 (55%), Positives = 184/279 (65%), Gaps = 19/279 (6%)
Query: 455 PFLGSQQH--HQVGSAP--SGLPLDRHFSYFPESPDAS---LMSPVGFGNLNHGDGNFM- 506
P + QH H VGSAP + P +R SY ESP+ S L SP G G HG
Sbjct: 650 PHMLRTQHLDHHVGSAPVVTASPWERKNSYLGESPETSAFHLGSP-GNGGF-HGSWQMRP 707
Query: 507 VNMGARASVGVSVGLSGTNTEIISPNFRMMSPLPRHGSLFLGNGSYTGPGATTIEGLAER 566
+ A ++ VG +GT +S + SP P L+ G + + + ER
Sbjct: 708 MEFSAHNNMFSHVGGNGTE---LSSSAGQSSPNPLSHILY---GRQSTTAMSKFDPTNER 761
Query: 567 AR---SRRPDNNGNQMDSKKLYQLDLEKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDEN 623
R SR+ + N N KKLY+LDL +I+ GED+RTTLMIKNIPNKYTSKMLL AIDE
Sbjct: 762 MRNLYSRKTEANTNGNADKKLYELDLGRILRGEDSRTTLMIKNIPNKYTSKMLLVAIDEQ 821
Query: 624 HCGTYDFVYLPIDFKNKCNVGYAFINMVSPSHIVPFFKAFNGKKWEKFNSEKVASLAYAR 683
GTYDF+YLPIDFKNKCNVGYAFINM+ P+ I+PF +AF+GKKWEKFNSEKVASLAYAR
Sbjct: 822 CRGTYDFLYLPIDFKNKCNVGYAFINMIDPAQIIPFHQAFHGKKWEKFNSEKVASLAYAR 881
Query: 684 IQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQGTGDQE 722
IQG+A+LV HFQNSSLMNEDKRCRPILF +EG GD E
Sbjct: 882 IQGRASLVSHFQNSSLMNEDKRCRPILFQTEGPNAGDME 920
Score = 263 bits (671), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 149/270 (55%), Positives = 188/270 (69%), Gaps = 21/270 (7%)
Query: 1 METNAIGNLLPDDEDELLAGIMDDFDLTRLPIQLEDLDENDLFANGGGFEMDFEPQXXXX 60
ME + I NLLPD ED+L +G+ D + +D + D+F++GGG E++ +
Sbjct: 183 MEADYIHNLLPD-EDDLFSGVADGLEYNSHARTNDDSEYTDVFSSGGGMELEGDEHLSSL 241
Query: 61 XXXXXXXXXXXXASSGI-AQYAIPNGMGAVAGEHPYGEHPSRTLFVRNINSNVEDSELRI 119
+SG+ + G G+ P+ E PSRTLFVRNINS+VED EL+
Sbjct: 242 RR-----------TSGLDGDHGF---FGGSKGKLPFVEQPSRTLFVRNINSSVEDFELKT 287
Query: 120 LFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPS 179
LFEQYGDIRT+YTACKHRGFVMISY+D+RAA+ AM+ALQ+KPLR RKLDIH+SIPK N
Sbjct: 288 LFEQYGDIRTMYTACKHRGFVMISYFDLRAAQRAMQALQSKPLRSRKLDIHYSIPKVNAP 347
Query: 180 EKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAAL 239
EKDI GTL++ LD SVSND+ ++IFG YGE+K+I E P +H KFIEFYDVRAAEAAL
Sbjct: 348 EKDIGHGTLMLSGLDSSVSNDEFKRIFGFYGEIKDIYEYPEMKHLKFIEFYDVRAAEAAL 407
Query: 240 KALNRSDIAGKRIKLEPSRPGGARRNLMQQ 269
+ALNR +IAGK+IKLEP P +LMQQ
Sbjct: 408 RALNRIEIAGKQIKLEPGHP-----SLMQQ 432
>Medtr8g100160.2 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr8:40164328-40156696 | 20130731
Length = 968
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/279 (55%), Positives = 184/279 (65%), Gaps = 19/279 (6%)
Query: 455 PFLGSQQH--HQVGSAP--SGLPLDRHFSYFPESPDAS---LMSPVGFGNLNHGDGNFM- 506
P + QH H VGSAP + P +R SY ESP+ S L SP G G HG
Sbjct: 654 PHMLRTQHLDHHVGSAPVVTASPWERKNSYLGESPETSAFHLGSP-GNGGF-HGSWQMRP 711
Query: 507 VNMGARASVGVSVGLSGTNTEIISPNFRMMSPLPRHGSLFLGNGSYTGPGATTIEGLAER 566
+ A ++ VG +GT +S + SP P L+ G + + + ER
Sbjct: 712 MEFSAHNNMFSHVGGNGTE---LSSSAGQSSPNPLSHILY---GRQSTTAMSKFDPTNER 765
Query: 567 AR---SRRPDNNGNQMDSKKLYQLDLEKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDEN 623
R SR+ + N N KKLY+LDL +I+ GED+RTTLMIKNIPNKYTSKMLL AIDE
Sbjct: 766 MRNLYSRKTEANTNGNADKKLYELDLGRILRGEDSRTTLMIKNIPNKYTSKMLLVAIDEQ 825
Query: 624 HCGTYDFVYLPIDFKNKCNVGYAFINMVSPSHIVPFFKAFNGKKWEKFNSEKVASLAYAR 683
GTYDF+YLPIDFKNKCNVGYAFINM+ P+ I+PF +AF+GKKWEKFNSEKVASLAYAR
Sbjct: 826 CRGTYDFLYLPIDFKNKCNVGYAFINMIDPAQIIPFHQAFHGKKWEKFNSEKVASLAYAR 885
Query: 684 IQGKAALVMHFQNSSLMNEDKRCRPILFHSEGQGTGDQE 722
IQG+A+LV HFQNSSLMNEDKRCRPILF +EG GD E
Sbjct: 886 IQGRASLVSHFQNSSLMNEDKRCRPILFQTEGPNAGDME 924
Score = 262 bits (670), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 150/270 (55%), Positives = 188/270 (69%), Gaps = 17/270 (6%)
Query: 1 METNAIGNLLPDDEDELLAGIMDDFDLTRLPIQLEDLDENDLFANGGGFEMDFEPQXXXX 60
ME + I NLLPD ED+L +G+ D + +D + D+F++GGG E++ +
Sbjct: 183 MEADYIHNLLPD-EDDLFSGVADGLEYNSHARTNDDSEYTDVFSSGGGMELEGDEHLSSL 241
Query: 61 XXXXXXXXXXXXASSGI-AQYAIPNGMGAVAGEHPYGEHPSRTLFVRNINSNVEDSELRI 119
+SG+ + G G+ P+ E PSRTLFVRNINS+VED EL+
Sbjct: 242 RR-----------TSGLDGDHGF---FGGSKGKLPFVEQPSRTLFVRNINSSVEDFELKT 287
Query: 120 LFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPS 179
LFEQYGDIRT+YTACKHRGFVMISY+D+RAA+ AM+ALQ+KPLR RKLDIH+SIPK N
Sbjct: 288 LFEQYGDIRTMYTACKHRGFVMISYFDLRAAQRAMQALQSKPLRSRKLDIHYSIPKVNAP 347
Query: 180 EKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAAL 239
EKDI GTL++ LD SVSND+ ++IFG YGE+K+I E P +H KFIEFYDVRAAEAAL
Sbjct: 348 EKDIGHGTLMLSGLDSSVSNDEFKRIFGFYGEIKDIYEYPEMKHLKFIEFYDVRAAEAAL 407
Query: 240 KALNRSDIAGKRIKLEPSRPGGARRNLMQQ 269
+ALNR +IAGK+IKLEP P A LMQQ
Sbjct: 408 RALNRIEIAGKQIKLEPGHPRFA-TCLMQQ 436
>Medtr7g020950.2 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr7:6551414-6555856 | 20130731
Length = 738
Score = 250 bits (638), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/157 (77%), Positives = 132/157 (84%), Gaps = 1/157 (0%)
Query: 565 ERARSRRPDNNGNQMDSKKLYQLDLEKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENH 624
+R RSRR N D K+ Y+LD++ I GED RTTLMIKNIPNKYTSKMLLAAIDE+H
Sbjct: 556 KRVRSRRNVGASNLADMKR-YELDIDCIKRGEDNRTTLMIKNIPNKYTSKMLLAAIDEHH 614
Query: 625 CGTYDFVYLPIDFKNKCNVGYAFINMVSPSHIVPFFKAFNGKKWEKFNSEKVASLAYARI 684
G YDFVYLPIDF+NKCNVGYAFINM SPS IVPF++ FNGKKWEKFNSEKVASLAYARI
Sbjct: 615 KGAYDFVYLPIDFRNKCNVGYAFINMTSPSLIVPFYQGFNGKKWEKFNSEKVASLAYARI 674
Query: 685 QGKAALVMHFQNSSLMNEDKRCRPILFHSEGQGTGDQ 721
QGKAALV HFQNSSLMNEDKRCRPIL ++G GDQ
Sbjct: 675 QGKAALVAHFQNSSLMNEDKRCRPILIDTDGPNAGDQ 711
Score = 249 bits (636), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 190/318 (59%), Gaps = 22/318 (6%)
Query: 1 METNAIGNLLPDDEDELLAGIMDDFDLTRLPIQLEDLDENDLFANGGGFEM-DFEPQXXX 59
+E IGNLLPD ED+LL+G+ D + +D+DE DLF++ GGF++ D E
Sbjct: 42 LEAQIIGNLLPD-EDDLLSGVTDGNNYIICDSNGDDIDELDLFSSNGGFDLGDVE----- 95
Query: 60 XXXXXXXXXXXXXASSGIAQYAIPNGM--GAVAGEHPYGEHPSRTLFVRNINSNVEDSEL 117
SS I +G+ ++AGE+ YGEHPSRTLFVRNI+S+V+DS L
Sbjct: 96 ------------NPSSIERNSEIISGVRNSSIAGENSYGEHPSRTLFVRNIDSDVKDSVL 143
Query: 118 RILFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDN 177
+ LFEQ+GDI T CKH+G MISYYDIRAA+ AMRAL N+ R+K DIH+ IPKD+
Sbjct: 144 KALFEQFGDIHTFDRTCKHQGSAMISYYDIRAAQNAMRALNNRLFGRKKFDIHYPIPKDS 203
Query: 178 PSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEA 237
PS +NQGTL VF D S+SN +L+ I YG +KEI E P + HK IEFYD RAA+A
Sbjct: 204 PSRNGVNQGTLEVFLYDSSISNTELQHILNVYGGIKEIHENPRSQRHKLIEFYDFRAADA 263
Query: 238 ALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDETRTFRHQVGSPLANSPPGN 297
AL +NR+D KR+K++ + + N++Q + E +Q E HQ L +
Sbjct: 264 ALHGINRNDTTMKRLKVDQMQSTNSESNIIQPMHPEFKQ-ECDLCLHQKSPLLKPTTSFQ 322
Query: 298 WAHFGSPIEPNPLGSFSK 315
H S PN L S K
Sbjct: 323 DLHGTSSSVPNMLPSIMK 340
>Medtr7g020950.1 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr7:6550688-6555387 | 20130731
Length = 822
Score = 250 bits (638), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 121/157 (77%), Positives = 132/157 (84%), Gaps = 1/157 (0%)
Query: 565 ERARSRRPDNNGNQMDSKKLYQLDLEKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENH 624
+R RSRR N D K+ Y+LD++ I GED RTTLMIKNIPNKYTSKMLLAAIDE+H
Sbjct: 640 KRVRSRRNVGASNLADMKR-YELDIDCIKRGEDNRTTLMIKNIPNKYTSKMLLAAIDEHH 698
Query: 625 CGTYDFVYLPIDFKNKCNVGYAFINMVSPSHIVPFFKAFNGKKWEKFNSEKVASLAYARI 684
G YDFVYLPIDF+NKCNVGYAFINM SPS IVPF++ FNGKKWEKFNSEKVASLAYARI
Sbjct: 699 KGAYDFVYLPIDFRNKCNVGYAFINMTSPSLIVPFYQGFNGKKWEKFNSEKVASLAYARI 758
Query: 685 QGKAALVMHFQNSSLMNEDKRCRPILFHSEGQGTGDQ 721
QGKAALV HFQNSSLMNEDKRCRPIL ++G GDQ
Sbjct: 759 QGKAALVAHFQNSSLMNEDKRCRPILIDTDGPNAGDQ 795
Score = 249 bits (635), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 139/293 (47%), Positives = 184/293 (62%), Gaps = 23/293 (7%)
Query: 1 METNAIGNLLPDDEDELLAGIMDDFDLTRLPIQLEDLDENDLFANGGGFEM-DFEPQXXX 59
+E IGNLLPD ED+LL+G+ D + +D+DE DLF++ GGF++ D E
Sbjct: 108 LEAQIIGNLLPD-EDDLLSGVTDGNNYIICDSNGDDIDELDLFSSNGGFDLGDVE----- 161
Query: 60 XXXXXXXXXXXXXASSGIAQYAIPNGM--GAVAGEHPYGEHPSRTLFVRNINSNVEDSEL 117
SS I +G+ ++AGE+ YGEHPSRTLFVRNI+S+V+DS L
Sbjct: 162 ------------NPSSIERNSEIISGVRNSSIAGENSYGEHPSRTLFVRNIDSDVKDSVL 209
Query: 118 RILFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDN 177
+ LFEQ+GDI T CKH+G MISYYDIRAA+ AMRAL N+ R+K DIH+ IPKD+
Sbjct: 210 KALFEQFGDIHTFDRTCKHQGSAMISYYDIRAAQNAMRALNNRLFGRKKFDIHYPIPKDS 269
Query: 178 PSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEA 237
PS +NQGTL VF D S+SN +L+ I YG +KEI E P + HK IEFYD RAA+A
Sbjct: 270 PSRNGVNQGTLEVFLYDSSISNTELQHILNVYGGIKEIHENPRSQRHKLIEFYDFRAADA 329
Query: 238 ALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDETRTFRHQVGSPL 290
AL +NR+D KR+K++ + + N++Q + E +Q E HQ SPL
Sbjct: 330 ALHGINRNDTTMKRLKVDQMQSTNSESNIIQPMHPEFKQ-ECDLCLHQ-KSPL 380
>Medtr7g118210.1 | RNA recognition motif 2 in plant MEI2-like
protein, putative | HC | chr7:49062258-49057045 |
20130731
Length = 751
Score = 230 bits (586), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 137/324 (42%), Positives = 181/324 (55%), Gaps = 36/324 (11%)
Query: 14 EDELLAGIMDDFDLTRL--PIQLEDLDENDLFANGGGFEM-DFEPQXXXXXXXXXXXXXX 70
E+E L +++ + + +Q ED DE DL ++ GG ++ DF+
Sbjct: 56 EEEKLCVSLEELEAQTIGNLLQDEDEDELDLISSNGGLDLEDFDSSSFREKNCEILDKAR 115
Query: 71 XXASSGIAQYAIPNGMGAVAGEHPYGEHPSRTLFVRNINSNVEDSELRILFEQYGDIRTL 130
+ A E+P GEHPSRTLFVRNI+S VEDSEL+ LFEQ+GDI T
Sbjct: 116 NTS---------------FAVENPSGEHPSRTLFVRNIDSEVEDSELKALFEQFGDIDTF 160
Query: 131 YTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVV 190
CKH+G MISYYD+RAA+ AMRALQN+ RK DIH+SIPKD+PS K +NQGTL V
Sbjct: 161 DRDCKHQGNAMISYYDMRAAQKAMRALQNQLFSCRKFDIHYSIPKDSPSRKGVNQGTLAV 220
Query: 191 FNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGK 250
F D S+SN ++ IF +G++KEI E PH HHK IEFY+ AAE AL LNR+D + K
Sbjct: 221 FLYDSSISNTEIHNIFNVHGDIKEIHENPHSWHHKLIEFYNFEAAEKALHDLNRNDTSMK 280
Query: 251 RIKLEPSRPGGARRNLMQQLSQELEQDETRTFRHQVGSPLANSPPGNWA--HFGSPIEPN 308
R+K+EP SQ + + HQ SP+ PP ++ H S PN
Sbjct: 281 RLKVEP--------------SQSTDSESMIQLIHQKSSPI--KPPTSFQGLHGISSSVPN 324
Query: 309 PLGSFSKSPGLGHASPMSTNHLSG 332
L S K +G ++ + SG
Sbjct: 325 TLPSLIKLKSVGIQCEITESSCSG 348
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/154 (66%), Positives = 114/154 (74%), Gaps = 17/154 (11%)
Query: 568 RSRRPDNNGNQMDSKKLYQLDLEKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHCGT 627
RSRR N D K+ Y+LD++ II GED RTTLMIKNIPNK T
Sbjct: 541 RSRRNVGATNLADMKR-YELDIDCIIRGEDNRTTLMIKNIPNK----------------T 583
Query: 628 YDFVYLPIDFKNKCNVGYAFINMVSPSHIVPFFKAFNGKKWEKFNSEKVASLAYARIQGK 687
YDFVYLPIDF+NKCN GYAFINM SPS I+PF++AFNGKKWEKFNSEKVASLAYARIQGK
Sbjct: 584 YDFVYLPIDFRNKCNAGYAFINMTSPSLIIPFYEAFNGKKWEKFNSEKVASLAYARIQGK 643
Query: 688 AALVMHFQNSSLMNEDKRCRPILFHSEGQGTGDQ 721
ALV HFQ+SSLMN DK CRPIL ++G GDQ
Sbjct: 644 TALVNHFQHSSLMNVDKHCRPILIDTDGPNAGDQ 677
>Medtr5g058270.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr5:24087213-24086146 | 20130731
Length = 141
Score = 222 bits (565), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/131 (81%), Positives = 117/131 (89%)
Query: 123 QYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKD 182
+YGDIRTLY C+HRGFVMISYYDIRAA +AM ALQ+KPL R LDIHFS PKDNPS+KD
Sbjct: 10 KYGDIRTLYKRCRHRGFVMISYYDIRAACSAMHALQDKPLGGRNLDIHFSNPKDNPSQKD 69
Query: 183 INQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKAL 242
INQGT VVFNLD SVSNDDL QI GAYGEVKEIRE+P+KR HKFIEFYDVRAA+AA+K L
Sbjct: 70 INQGTFVVFNLDLSVSNDDLHQICGAYGEVKEIRESPNKRDHKFIEFYDVRAADAAVKEL 129
Query: 243 NRSDIAGKRIK 253
N+SDIAGKRIK
Sbjct: 130 NQSDIAGKRIK 140
>Medtr5g068540.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
LC | chr5:29018170-29014149 | 20130731
Length = 369
Score = 206 bits (524), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 109/127 (85%)
Query: 129 TLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTL 188
TLY C+HRGFVMISYYDIRAA TAM ALQ+K L R LD HFS PKDNPS+KDINQGTL
Sbjct: 118 TLYKRCRHRGFVMISYYDIRAACTAMHALQDKTLGARNLDFHFSNPKDNPSQKDINQGTL 177
Query: 189 VVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIA 248
VVFNLD SVSNDDL QI GAYGEVKEIRETP+KR HKFIEFYDVRAA+AALKALN+SDI+
Sbjct: 178 VVFNLDLSVSNDDLHQICGAYGEVKEIRETPNKRDHKFIEFYDVRAADAALKALNQSDIS 237
Query: 249 GKRIKLE 255
G +E
Sbjct: 238 GHGGGIE 244
>Medtr3g086380.1 | RNA recognition motif 1 in terminal EAR1-like
protein, putative | HC | chr3:39136472-39139376 |
20130731
Length = 524
Score = 142 bits (357), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 85/135 (62%), Gaps = 14/135 (10%)
Query: 590 EKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHC-------------GTYDFVYLPID 636
E I D RTTLMIKNIPNKY+ K+LL +D NHC +YDFVYLPID
Sbjct: 326 EDAIVESDPRTTLMIKNIPNKYSQKLLLNMLD-NHCVHCNEQLGDGEPLSSYDFVYLPID 384
Query: 637 FKNKCNVGYAFINMVSPSHIVPFFKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQN 696
FKNKCNVGY F+NM SP + F+KAF + WE FNS K+ L YAR+QG +L HF+N
Sbjct: 385 FKNKCNVGYGFVNMTSPEATLRFYKAFQHQHWEVFNSRKICQLTYARVQGLESLKEHFKN 444
Query: 697 SSLMNEDKRCRPILF 711
S E + P++F
Sbjct: 445 SKFPCEMEHYLPVVF 459
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 92/174 (52%), Gaps = 34/174 (19%)
Query: 114 DSELRILFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQN---------KPLRR 164
+++LR +G++R + T G + YYD+R A TA A++ PL
Sbjct: 59 ETDLRKDLSAFGEVRAVQTDSFRNGVITAHYYDLRHAETAFAAIRTHHVLCAAYFNPLSY 118
Query: 165 RK------------------LDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIF 206
+ L H+ + NQGTLVVFNLD VS+D L+Q+F
Sbjct: 119 SQIFPTPLPPPPPGLVAGAPLWAHYVLSDAQ------NQGTLVVFNLDDDVSSDQLQQVF 172
Query: 207 GAYGEVKEIRETP-HKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSRP 259
GA+G +KE+R+TP KR+ F+EF+D+R AE ALK LN +I GK I +E S+P
Sbjct: 173 GAFGAIKEVRDTPWKKRNQSFVEFFDIRDAEKALKELNGKEINGKPIAIEFSKP 226
>Medtr3g462120.1 | RNA recognition motif protein | LC |
chr3:24775496-24774012 | 20130731
Length = 136
Score = 97.4 bits (241), Expect = 5e-20, Method: Composition-based stats.
Identities = 42/53 (79%), Positives = 49/53 (92%)
Query: 123 QYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPK 175
QYGDI T+YTACKHRGFVMISY+D+RAA+ AM+ALQ KPLR RKL+IH+SIPK
Sbjct: 81 QYGDICTMYTACKHRGFVMISYFDLRAAQRAMQALQCKPLRSRKLNIHYSIPK 133
>Medtr4g071310.1 | RNA recognition motif 3 in plant MEI2-like
protein | LC | chr4:26913075-26914475 | 20130731
Length = 336
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 70/146 (47%), Gaps = 18/146 (12%)
Query: 593 ISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHC-------------GTYDF--VYLPIDF 637
+ + TT+MIKNIP+KYT LL ++E C T+ F VYLPIDF
Sbjct: 181 VQKDGKETTVMIKNIPSKYTRDKLLDFLEE-FCMRENAKDQANGEESTFAFNAVYLPIDF 239
Query: 638 KNKCNVGYAFINMVSPSHIVPFFKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNS 697
+ N GYAF+N F +GK WE FNS K+ + AR+QGK L HF +
Sbjct: 240 CTELNKGYAFVNFTKHEAAWKFQLTASGKNWEHFNSSKICDVVAARLQGKEKLENHFGSM 299
Query: 698 SLMNEDKRCRPILFH--SEGQGTGDQ 721
+ P+ F +G G+Q
Sbjct: 300 VFPYSSEEVLPLFFSPPRDGVTKGNQ 325
>Medtr5g059620.1 | RNA recognition motif 3 in plant MEI2-like
protein | LC | chr5:24780295-24778287 | 20130731
Length = 233
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 19/136 (13%)
Query: 600 TTLMIKNIPNKYTSKMLLAAIDENHC------------GTYDFVYLPIDF------KNKC 641
TT+MI+NIPN++ LL +D+ HC Y+ VYLP+D+ +
Sbjct: 73 TTVMIRNIPNQFRFDNLLKILDD-HCFEINKNADPEDWSKYNIVYLPMDYMKHALERRMS 131
Query: 642 NVGYAFINMVSPSHIVPFFKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMN 701
N+GYAF+N +P+ F+K FNG W + K+ + A+ QGK +L+M F
Sbjct: 132 NLGYAFVNFTTPAAAFKFYKQFNGFAWNVRQNRKICEINAAQHQGKESLIMIFSQKVFRC 191
Query: 702 EDKRCRPILFHSEGQG 717
++ PILF + G
Sbjct: 192 KNPDFLPILFSAGRDG 207
>Medtr0166s0030.1 | RNA recognition motif 3 in plant MEI2-like
protein | LC | scaffold0166:22678-20443 | 20130731
Length = 253
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 19/136 (13%)
Query: 600 TTLMIKNIPNKYTSKMLLAAIDENHC------------GTYDFVYLPIDF------KNKC 641
TT+MI+NIPN++ LL +D+ HC Y+ VYLP+D+ +
Sbjct: 73 TTVMIRNIPNQFRFDNLLKILDD-HCFEINKNADPEDWSKYNIVYLPMDYMKHALERRMS 131
Query: 642 NVGYAFINMVSPSHIVPFFKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLMN 701
N+GYAF+N +P+ F+K FNG W + K+ + A+ QGK +L+M F
Sbjct: 132 NLGYAFVNFTTPAAAFKFYKQFNGFAWNVRQNRKICEINAAQHQGKESLIMIFSQKVFRC 191
Query: 702 EDKRCRPILFHSEGQG 717
++ PILF + G
Sbjct: 192 KNPDFLPILFSAGRDG 207
>Medtr0166s0040.1 | RNA recognition motif 3 in plant MEI2-like
protein | LC | scaffold0166:32284-33677 | 20130731
Length = 200
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 600 TTLMIKNIPNKYTSKMLLAAIDENHC-------------GTYDFVYLPIDFKNKC----- 641
TT+MI+NIPN++ LL +D HC +DFVYLP+D+
Sbjct: 41 TTVMIRNIPNQFRFDNLLMILDV-HCFEINKILDDPADWSKFDFVYLPMDYMKHAVKGKM 99
Query: 642 -NVGYAFINMVSPSHIVPFFKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLM 700
N+GYAF+N +PS F+K F G W + K+ + A+ QGK +L+ F
Sbjct: 100 SNLGYAFVNFTTPSAAFKFYKQFQGFAWNVTQNPKICEINAAKYQGKESLIRIFSQKVFR 159
Query: 701 NEDKRCRPILFHSEGQG 717
++ PILF + G
Sbjct: 160 CKNPDFLPILFSAGRDG 176
>Medtr5g059640.1 | RNA recognition motif 3 in plant MEI2-like
protein | LC | chr5:24789901-24791294 | 20130731
Length = 200
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 600 TTLMIKNIPNKYTSKMLLAAIDENHC-------------GTYDFVYLPIDFKNKC----- 641
TT+MI+NIPN++ LL +D HC +DFVYLP+D+
Sbjct: 41 TTVMIRNIPNQFRFDNLLMILDV-HCFEINKILDDPADWSKFDFVYLPMDYMKHAVKGKM 99
Query: 642 -NVGYAFINMVSPSHIVPFFKAFNGKKWEKFNSEKVASLAYARIQGKAALVMHFQNSSLM 700
N+GYAF+N +PS F+K F G W + K+ + A+ QGK +L+ F
Sbjct: 100 SNLGYAFVNFTTPSAAFKFYKQFQGFAWNVTXNPKICEINAAKYQGKESLIRIFSQKVFR 159
Query: 701 NEDKRCRPILFHSEGQG 717
++ PILF + G
Sbjct: 160 CKNPDFLPILFSAGRDG 176
>Medtr4g068120.2 | flowering time control FPA-like protein | HC |
chr4:25458538-25448035 | 20130731
Length = 973
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 9/167 (5%)
Query: 99 PSRTLFVRNINSNVEDSELRILFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ 158
PS L+V N++ +V DS+L LF QYG + ++ T+ R + + + I A+ A ALQ
Sbjct: 25 PSNNLYVANLSPDVTDSDLMDLFVQYGALDSV-TSYSARNYAFVFFKRIDDAKAAKNALQ 83
Query: 159 NKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRET 218
R L I F+ P K Q L V + P+V+ +DL F +G+V++ +
Sbjct: 84 GFNFRGNSLRIEFARPA-----KTCKQ--LWVGGISPAVTKEDLEADFRKFGKVEDFKFF 136
Query: 219 PHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSRPGGARRN 265
R+ +EF+++ A A+K +N I G+ I+++ R A+R+
Sbjct: 137 -RDRNTACVEFFNLDDAIQAMKIMNGKHIGGENIRVDFLRSNYAKRD 182
>Medtr4g068120.1 | flowering time control FPA-like protein | HC |
chr4:25458538-25450507 | 20130731
Length = 973
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 9/167 (5%)
Query: 99 PSRTLFVRNINSNVEDSELRILFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQ 158
PS L+V N++ +V DS+L LF QYG + ++ T+ R + + + I A+ A ALQ
Sbjct: 25 PSNNLYVANLSPDVTDSDLMDLFVQYGALDSV-TSYSARNYAFVFFKRIDDAKAAKNALQ 83
Query: 159 NKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRET 218
R L I F+ P K Q L V + P+V+ +DL F +G+V++ +
Sbjct: 84 GFNFRGNSLRIEFARPA-----KTCKQ--LWVGGISPAVTKEDLEADFRKFGKVEDFKFF 136
Query: 219 PHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSRPGGARRN 265
R+ +EF+++ A A+K +N I G+ I+++ R A+R+
Sbjct: 137 -RDRNTACVEFFNLDDAIQAMKIMNGKHIGGENIRVDFLRSNYAKRD 182
>Medtr4g131970.1 | polyadenylate-binding protein RBP47C | HC |
chr4:55111286-55115662 | 20130731
Length = 411
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 23/191 (12%)
Query: 90 AGEHPYGEHPSRTLFVRNINSNVEDSELRILFE-QYGDIRTLY-----TACKHRGFVMIS 143
+GE + + P T+FV ++ ++V D L +F +Y ++ T + +G+ +
Sbjct: 156 SGEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVR 215
Query: 144 YYDIRAARTAMRALQNKPLRRRKLDIHFSIPKD-----------NP-----SEKDINQGT 187
+ D AM +Q R + I + K+ NP +E D N T
Sbjct: 216 FADESEQMRAMTEMQGVLCSTRPMRIGPASNKNLGTQTSKASYQNPQGGAQNENDPNNTT 275
Query: 188 LVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDI 247
+ V NLDP+V+++ L+Q+F YGE+ ++ P + F++F D +AE AL+ LN + +
Sbjct: 276 IFVGNLDPNVTDEHLKQVFTQYGELVHVK-IPSGKRCGFVQFADRSSAEEALRVLNGTLL 334
Query: 248 AGKRIKLEPSR 258
G+ ++L R
Sbjct: 335 GGQNVRLSWGR 345
>Medtr2g022950.1 | polyadenylate-binding protein RBP47B | HC |
chr2:7987418-7992129 | 20130731
Length = 401
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 22/181 (12%)
Query: 99 PSRTLFVRNINSNVEDSELRILFE-QYGDIRTLYTAC-----KHRGFVMISYYDIRAART 152
P T+FV ++ ++V D L+ F +Y ++ + +G+ + + D
Sbjct: 153 PDHTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRSKGYGFVRFADEGEQMR 212
Query: 153 AMRALQNKPLRRRKLDIHFSIPKD-----------NPS----EKDINQGTLVVFNLDPSV 197
AM +Q R + I + K+ NPS E D N T+ V NLDP+V
Sbjct: 213 AMTEMQGVLCSTRPMRIGPATNKNPAATTQPKASYNPSGGQSENDPNNTTIFVGNLDPNV 272
Query: 198 SNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPS 257
++D LRQ+F YGE+ ++ P + F++F D AE A++ LN + + G+ ++L
Sbjct: 273 TDDHLRQVFTQYGELVHVK-IPSGKRCGFVQFSDRSCAEEAIRVLNGTLLGGQNVRLSWG 331
Query: 258 R 258
R
Sbjct: 332 R 332
>Medtr4g085540.1 | polyadenylate-binding protein | HC |
chr4:33416965-33423437 | 20130731
Length = 654
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 83/166 (50%), Gaps = 11/166 (6%)
Query: 100 SRTLFVRNINSNVEDSELRILFEQYGDIRTL-----YTACKHRGFVMISYYDIRAARTAM 154
+ +L+V +++ NV DS+L LF Q G + ++ T + G+ ++Y + + A A+
Sbjct: 33 TTSLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARAL 92
Query: 155 RALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKE 214
L PL R + I +S +PS + QG + + NLD ++ + L F ++G +
Sbjct: 93 DVLNFTPLNNRPIRIMYS--HRDPSIRKSGQGNIFIKNLDKAIDHKALHDTFSSFGNILS 150
Query: 215 IRE----TPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEP 256
+ + + + F++F AA+ A++ LN + K++ + P
Sbjct: 151 CKVAVDGSGQSKGYGFVQFDTEEAAQKAIEKLNGMLLNDKQVYVGP 196
>Medtr1g020080.1 | polyadenylate-binding protein RBP47C | HC |
chr1:6171590-6176327 | 20130731
Length = 425
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 102 TLFVRNINSNVEDSELRILFEQ-YGDIR---TLYTA--CKHRGFVMISYYDIRAARTAMR 155
++FV ++ ++V DS L F Y ++ +Y A + +G+ + + D AM
Sbjct: 191 SIFVGDLAADVTDSVLHETFSSSYPSVKAAKVVYDANTGRSKGYGFVRFGDESERSQAMT 250
Query: 156 ALQNKPLRRRKLDIHFSIPKDNP--------------SEKDINQGTLVVFNLDPSVSNDD 201
+ R + I + P+ + SE D T+ V LD +V+++D
Sbjct: 251 QMNGVYCSSRPMRIGAATPRKSSGHQPGGQSNGTSSQSEADSTNTTIFVGGLDSNVTDED 310
Query: 202 LRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSR 258
L+Q F YGE+ ++ P + F++F + AE AL+ LN + I + ++L R
Sbjct: 311 LKQTFSQYGEIASVK-IPVGKGCGFVQFANRNNAEEALQKLNGTMIGKQTVRLSWGR 366
>Medtr3g101370.1 | polyadenylate-binding protein RBP47C | HC |
chr3:46662442-46658399 | 20130731
Length = 420
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 95/226 (42%), Gaps = 43/226 (19%)
Query: 99 PSRTLFVRNINSNVEDSELRILF-EQYGDIRTLYTAC-----KHRGFVMISYYDIRAART 152
P ++FV ++ ++V D+ L F ++Y ++ + +G+ + + D
Sbjct: 185 PDLSIFVGDLAADVTDTMLLETFSDKYPSVKAAKVVFDANTGRSKGYGFVRFGDDGERSK 244
Query: 153 AMRALQNKPLRRRKLDIHFSIPKDN------------PSEKDINQGTLVVF--NLDPSVS 198
A+ + R + I + P+ + PS+ D + +F LDPS +
Sbjct: 245 ALNEMNGVFCSSRAMRIGAATPRKSSGYQQGGQSNGTPSQSDTDSTNTTIFVGGLDPSAT 304
Query: 199 NDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSR 258
+DLRQ F YGE+ ++ P + F++F + AE AL+ LN + + + ++L R
Sbjct: 305 AEDLRQPFSQYGEIVSVK-IPVGKGCGFVQFANRNNAEEALQKLNGTTVGKQTVRLSWGR 363
Query: 259 PGGARRNLMQQLSQELEQDETRTFRHQVGSPLANSPPGNWAHFGSP 304
+ FR + GSP N P A++G P
Sbjct: 364 -----------------NPANKQFRSEFGSPW-NGP----AYYGGP 387
>Medtr6g040190.1 | polyadenylate-binding protein | LC |
chr6:14408733-14404765 | 20130731
Length = 623
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 96 GEHPSRTLFVRNINSNVEDSELRILFEQYGDIRTLYTACKHR------GFVMISYYDIRA 149
G + +L+V ++ NV D++L LF Q + ++ C+ + G+ ++Y + R
Sbjct: 20 GRFENSSLYVGDLQGNVNDAQLYDLFSQIAPVISV-RVCRDQMTQSSLGYGYVNYSNARD 78
Query: 150 ARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAY 209
A AM L PL + + I FS +P + L + NL+ S+ N L + F +
Sbjct: 79 AANAMENLNYVPLNGKPIRIMFS--HRDPLIRKTGFANLFIKNLETSIDNKALHETFSVF 136
Query: 210 GEVKEIR----ETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRI 252
G V + H + H F++F + ++A+ A++ L+ + K++
Sbjct: 137 GNVLSCKVAMDSNGHSKGHGFVQFDNDQSAKNAIEKLDGMLMNDKKV 183
>Medtr7g094660.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr7:37745112-37734961 | 20130731
Length = 865
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 21/187 (11%)
Query: 100 SRTLFVRNINSNVEDSELRILF-EQYGDIRTLYTACKHR---------GFVMISYYDIRA 149
+R+LFV+N+N D LR F E + R L K GF + +
Sbjct: 640 ARSLFVKNLNFKTTDEVLREHFSEHMKEGRILSVKVKKHLKNGKNVSMGFGFVEFDSTET 699
Query: 150 ARTAMRALQNKPLRRRKLDIHFSIPKDNPS------EKDINQGTLVVFNLDPSVSNDDLR 203
A + LQ L L + K++ EKD + L+V N+ + DLR
Sbjct: 700 ATSVCNDLQGTVLDGHALILQLCHVKNDDDKVQKKVEKDKSSTKLLVKNVAFEATEKDLR 759
Query: 204 QIFGAYGEVKEIRETPHK----RHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSRP 259
Q+F +G++K +R P K R F+E+ + A+ AL AL+ + + G+ + +E ++
Sbjct: 760 QLFSPFGQIKSLR-LPMKFGNHRGFAFVEYVTQQEAQNALTALSSTHLYGRHLVIERAKE 818
Query: 260 GGARRNL 266
G + L
Sbjct: 819 GESLEEL 825
>Medtr8g027190.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr8:9557166-9560056 | 20130731
Length = 249
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 26/169 (15%)
Query: 101 RTLFVRNINSNVEDSELRILFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNK 160
R +F N+ + SEL LF +YG I + GF + Y D R A A+RAL N
Sbjct: 2 RPVFAGNLEYDTRQSELERLFSKYGRIERVDMKS---GFAFVYYEDERDAEEAIRALDNI 58
Query: 161 PL--RRRKLDIHF-----------SIPKDNPSEKDINQGTLVVFNLDPSVSN-DDLRQIF 206
P +R+L + + S P P++ TL V N DP + D+ + F
Sbjct: 59 PFGHDKRRLSVEWARGERGRHRDGSKPNQKPTK------TLFVINFDPIRTRVSDIERHF 112
Query: 207 GAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLE 255
YG + +R +R+ F+++ A AL+ N S I + + +E
Sbjct: 113 KPYGPLHHVR---IRRNFAFVQYETQEDATKALECTNMSKILDRVVSVE 158
>Medtr8g027190.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr8:9557166-9560056 | 20130731
Length = 249
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 26/169 (15%)
Query: 101 RTLFVRNINSNVEDSELRILFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNK 160
R +F N+ + SEL LF +YG I + GF + Y D R A A+RAL N
Sbjct: 2 RPVFAGNLEYDTRQSELERLFSKYGRIERVDMKS---GFAFVYYEDERDAEEAIRALDNI 58
Query: 161 PL--RRRKLDIHF-----------SIPKDNPSEKDINQGTLVVFNLDPSVSN-DDLRQIF 206
P +R+L + + S P P++ TL V N DP + D+ + F
Sbjct: 59 PFGHDKRRLSVEWARGERGRHRDGSKPNQKPTK------TLFVINFDPIRTRVSDIERHF 112
Query: 207 GAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLE 255
YG + +R +R+ F+++ A AL+ N S I + + +E
Sbjct: 113 KPYGPLHHVR---IRRNFAFVQYETQEDATKALECTNMSKILDRVVSVE 158
>Medtr2g097960.1 | polyadenylate-binding protein RBP47B | HC |
chr2:41853094-41847353 | 20130731
Length = 428
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 91/225 (40%), Gaps = 42/225 (18%)
Query: 99 PSRTLFVRNINSNVEDSELRILFE-QYGDIRTLYTAC-----KHRGFVMISYYDIRAART 152
P ++FV ++ +V D L+ F YG +R + +G+ + + D
Sbjct: 106 PDHSIFVGDLAPDVTDYLLQETFRTHYGSVRGAKVVTDPNTGRSKGYGFVKFSDESERNR 165
Query: 153 AMRALQNKPLRRRKLDIHFSIPKDN----------------------------------- 177
AM + R + I + PK
Sbjct: 166 AMSEMNGVYCSTRPMRISAATPKKTTGYQQNPYAAVVAAAPVPKAIYPVPAYTTAPVNTV 225
Query: 178 PSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEA 237
P E D+N T+ V NLD +VS ++L+Q F +GE+ ++ P K F++F +AE
Sbjct: 226 PPEYDVNNTTIYVGNLDLNVSEEELKQNFLQFGEIVSVKVHPGKA-CGFVQFGARASAEE 284
Query: 238 ALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDETRTF 282
A++ + + + I++ RP AR+++ Q+++Q + +
Sbjct: 285 AIQKMQGKILGQQVIRVSWGRPQTARQDVPGGWGQQVDQSQWSAY 329
>Medtr3g462100.1 | MEI2-like protein, putative | LC |
chr3:24762802-24761878 | 20130731
Length = 123
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/67 (58%), Positives = 48/67 (71%), Gaps = 6/67 (8%)
Query: 193 LDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRI 252
LD SV ND +++FG Y E+KE++ + KFIEFYDVRAAEAAL+ALN +IAGK I
Sbjct: 5 LDSSVLNDKFKRVFGFYREIKEMK------YLKFIEFYDVRAAEAALRALNMIEIAGKHI 58
Query: 253 KLEPSRP 259
KLE P
Sbjct: 59 KLELGHP 65
>Medtr1g097440.2 | polyadenylate-binding protein | HC |
chr1:43966152-43970565 | 20130731
Length = 646
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 96 GEHPSRTLFVRNINSNVEDSELRILFEQYGDIRTLYTACKHR------GFVMISYYDIRA 149
G + +L+V ++ +V + +L LF Q + ++ C+ + G+ +++ + +
Sbjct: 25 GPFANASLYVGDLEGSVNEGQLFDLFSQVAQVVSIRV-CRDQTRRSSLGYAYVNFTNAQD 83
Query: 150 ARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAY 209
A A L PL + + I FS + +PS + G + + NLD S+ + L F A+
Sbjct: 84 AANAKELLNFTPLNEKPIRIMFS--QRDPSVRKSGSGNVFIKNLDTSIDHKALHDTFAAF 141
Query: 210 GEVKEIRET----PHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRI 252
G V + + + F++F + AA++A+K L+ I K++
Sbjct: 142 GPVLSCKVALDGNGQSKGYGFVQFDNEEAAKSAIKQLDGMLINDKQV 188
>Medtr1g097440.1 | polyadenylate-binding protein | HC |
chr1:43966161-43970565 | 20130731
Length = 646
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 96 GEHPSRTLFVRNINSNVEDSELRILFEQYGDIRTLYTACKHR------GFVMISYYDIRA 149
G + +L+V ++ +V + +L LF Q + ++ C+ + G+ +++ + +
Sbjct: 25 GPFANASLYVGDLEGSVNEGQLFDLFSQVAQVVSIRV-CRDQTRRSSLGYAYVNFTNAQD 83
Query: 150 ARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAY 209
A A L PL + + I FS + +PS + G + + NLD S+ + L F A+
Sbjct: 84 AANAKELLNFTPLNEKPIRIMFS--QRDPSVRKSGSGNVFIKNLDTSIDHKALHDTFAAF 141
Query: 210 GEVKEIRET----PHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRI 252
G V + + + F++F + AA++A+K L+ I K++
Sbjct: 142 GPVLSCKVALDGNGQSKGYGFVQFDNEEAAKSAIKQLDGMLINDKQV 188
>Medtr1g061870.1 | polyadenylate-binding plant protein, putative |
HC | chr1:27029234-27025443 | 20130731
Length = 522
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 86/181 (47%), Gaps = 10/181 (5%)
Query: 103 LFVRNINSNVEDSELRILFEQYGDIRTLYTA----CKHRGFVMISYYDIRAARTAMRALQ 158
+FV+N+ +++++ L LF++YG+I + A K +GF I + +A A++ +
Sbjct: 105 VFVKNLAASIDNVGLHDLFQKYGNILSSKIARSEDGKSKGFGYIQFDSEESANVAIQKMN 164
Query: 159 NKPLRRRKLDIHFSIPKDNPSEKDINQG--TLVVFNLDPSVSNDDLRQIFGAYGEVKEIR 216
+R +++ + I K S D++ L V NLDP V+ L + F ++G++ +
Sbjct: 165 GSTVRDKQIYVGKFIRKSERSLPDLDAKFTNLYVKNLDPVVTEKHLGEKFSSFGKIVSLA 224
Query: 217 ----ETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQ 272
E + F+ + A A++A++ S K + + ++ R ++ L
Sbjct: 225 IKKDENGQSKGFGFVNYDSPDDARRAMEAMDGSQFGSKILYVARAQKKVEREQILHHLFV 284
Query: 273 E 273
E
Sbjct: 285 E 285
>Medtr3g065190.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr3:29411645-29406062 | 20130731
Length = 379
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 17/186 (9%)
Query: 82 IPNGMGA-VAGEHPYGEHPSRTLFVRNINSNVEDSELRILFEQYGDIRTLYT-----ACK 135
I G+GA + G+H + T +V N++ + + L LF Q G + +Y +
Sbjct: 5 IAPGVGANLLGQHSAERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQ 64
Query: 136 HRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGT-LVVFNLD 194
H+G+ + + A A++ L L + + ++ K + +K ++ G L + NLD
Sbjct: 65 HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGANLFIGNLD 120
Query: 195 PSVSNDDLRQIFGAYGEV----KEIR--ETPHKRHHKFIEFYDVRAAEAALKALNRSDIA 248
P V L F A+G + K +R +T + R FI + A+++A++A+N +
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLC 180
Query: 249 GKRIKL 254
++I +
Sbjct: 181 NRQITV 186
>Medtr6g012500.1 | pollen allergen protein | LC |
chr6:3804518-3803334 | 20130731
Length = 282
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 16/74 (21%)
Query: 594 SGEDTRTTLMIKNIPNKYTSKMLLAAIDENHCG---------------TYDFVYLPIDFK 638
+GE+T + IP KY+ LLA ++E HC +DF+YLPIDFK
Sbjct: 66 NGEETTVMIEKHYIPTKYSRDKLLAFLEE-HCMFENAIDQSNGEESTFAFDFLYLPIDFK 124
Query: 639 NKCNVGYAFINMVS 652
+ N GYAF+N +S
Sbjct: 125 TELNNGYAFVNSLS 138
>Medtr1g101520.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr1:45856698-45851996 | 20130731
Length = 388
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 19/168 (11%)
Query: 101 RTLFVRNINSNVEDSELRILFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNK 160
+ +F N + +SEL LF +YG + + GF I D R A A+RAL
Sbjct: 2 KAIFCGNFEYDCRESELERLFRRYGKVDRVDMKA---GFAFIYMEDERDAEAAIRALDRI 58
Query: 161 PLRR--RKLDIHFSI-------PKDNPSEKDIN---QGTLVVFNLDP-SVSNDDLRQIFG 207
R R+L + ++ P + P N TL V N D DL + F
Sbjct: 59 EFGRKGRRLRVEWTKQERGVRRPAERPKRSSANARPSKTLFVINFDTYQTRTRDLERHFE 118
Query: 208 AYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLE 255
YG++ +R +++ F+++ A AL+A N S + + I +E
Sbjct: 119 PYGKIVSVR---IRKNFAFVQYESEDDACKALEATNNSKLMDRVISVE 163
>Medtr7g096260.1 | multiple RNA-binding domain protein | HC |
chr7:38601352-38612085 | 20130731
Length = 709
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 100 SRTLFVRNINSNVEDSELRILFEQY---GDIRTLYTACKHRGFVMIS----YYDIRAART 152
+R+LFV+N+N D LR F ++ G I ++ + +S + + +A T
Sbjct: 485 ARSLFVKNLNFKTTDEGLREHFSKHMKEGRILSVKVKKHLKKGKNVSMGFGFVEFDSAET 544
Query: 153 AMRALQNKPLRRRKLDIHFSIPK----------DNPSEKDINQGTLVVFNLDPSVSNDDL 202
A + L+ LD + I + EKD + L+V N+ + DL
Sbjct: 545 ATSVCND--LQGAVLDSYAHILQPCHVKNVGKVQKKVEKDKSSTKLLVRNVAFEATKKDL 602
Query: 203 RQIFGAYGEVKEIRETPHK----RHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSR 258
RQ+F +G++K+++ P K R F+E+ + A+ AL AL+ + + G+ + +E ++
Sbjct: 603 RQLFSPFGQIKKLK-LPMKFGNHRGFAFVEYVTQQEAQNALTALSSTHLYGRHLVIERAK 661
Query: 259 PGGARRNL 266
G + + L
Sbjct: 662 EGESLKEL 669
>Medtr7g096260.2 | multiple RNA-binding domain protein | HC |
chr7:38600263-38612243 | 20130731
Length = 723
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 24/188 (12%)
Query: 100 SRTLFVRNINSNVEDSELRILFEQY---GDIRTLYTACKHRGFVMIS----YYDIRAART 152
+R+LFV+N+N D LR F ++ G I ++ + +S + + +A T
Sbjct: 499 ARSLFVKNLNFKTTDEGLREHFSKHMKEGRILSVKVKKHLKKGKNVSMGFGFVEFDSAET 558
Query: 153 AMRALQNKPLRRRKLDIHFSIPK----------DNPSEKDINQGTLVVFNLDPSVSNDDL 202
A + L+ LD + I + EKD + L+V N+ + DL
Sbjct: 559 ATSVCND--LQGAVLDSYAHILQPCHVKNVGKVQKKVEKDKSSTKLLVRNVAFEATKKDL 616
Query: 203 RQIFGAYGEVKEIRETPHK----RHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSR 258
RQ+F +G++K+++ P K R F+E+ + A+ AL AL+ + + G+ + +E ++
Sbjct: 617 RQLFSPFGQIKKLK-LPMKFGNHRGFAFVEYVTQQEAQNALTALSSTHLYGRHLVIERAK 675
Query: 259 PGGARRNL 266
G + + L
Sbjct: 676 EGESLKEL 683