Miyakogusa Predicted Gene

Lj6g3v0920690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0920690.1 tr|B9GT26|B9GT26_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_551239 PE=4 SV=1,36.65,4e-18,
,CUFF.58526.1
         (201 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g047590.1 | hypothetical protein | HC | chr3:15863915-1586...   181   3e-46

>Medtr3g047590.1 | hypothetical protein | HC |
           chr3:15863915-15869431 | 20130731
          Length = 180

 Score =  181 bits (460), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/201 (54%), Positives = 118/201 (58%), Gaps = 49/201 (24%)

Query: 1   MVLISGTGNNKNVLQQTHDERAKAQGGMVVNNSHQQGNRSVESGRTQNLSNTGLIKEMTR 60
           MVLISG  NNK+VLQQ +D RAKAQG  V  NSHQQGN+SVES RTQNL NT L K MT 
Sbjct: 1   MVLISG--NNKSVLQQANDGRAKAQGVTVHQNSHQQGNKSVESVRTQNLPNTVLAKGMTT 58

Query: 61  MDEFKYGFPSESLSTTSNKWWGSSDHGDSTGTNPGTAKSQPEERGGEAEKVPCKTGNAEN 120
           +DEFKYGFPSESLST SNKWWG  D  D T TN    KSQPEE GGEAEK   +TG AE+
Sbjct: 59  LDEFKYGFPSESLSTISNKWWGWGDSDDRTDTNQDGGKSQPEESGGEAEKKERETGKAES 118

Query: 121 SETTQGSSLLTEENVACKTGNAENSETTQGSSLLTEENVACETGNAQNSETPQGSSLLTA 180
           SE T+                                                G SLL +
Sbjct: 119 SEETR-----------------------------------------------HGLSLLRS 131

Query: 181 VRKRAVEEGREAFKLGVFRGY 201
           VRKRAVEEGRE F LGVFRG+
Sbjct: 132 VRKRAVEEGRETFNLGVFRGF 152