Miyakogusa Predicted Gene
- Lj6g3v0885350.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0885350.1 Non Characterized Hit- tr|I3SWH4|I3SWH4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,90.86,0,TRANSLATION INITIATION INHIBITOR,YjgF/Yer057p/UK114
family; YjgF-like,Endoribonuclease L-PSP/chorism,CUFF.58437.1
(173 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g051740.1 | perchloric acid soluble translation inhibitor-... 288 2e-78
Medtr5g092740.1 | perchloric acid soluble translation inhibitor-... 249 8e-67
Medtr1535s0010.1 | endoribonuclease L-PSP protein | LC | scaffol... 50 1e-06
Medtr7g111650.2 | meiotically up-regulated protein 71-like prote... 47 1e-05
Medtr7g111650.4 | meiotically up-regulated protein 71-like prote... 47 1e-05
Medtr7g111650.5 | meiotically up-regulated protein 71-like prote... 47 1e-05
>Medtr3g051740.1 | perchloric acid soluble translation
inhibitor-like protein | HC | chr3:20484598-20481219 |
20130731
Length = 188
Score = 288 bits (737), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/188 (78%), Positives = 157/188 (83%), Gaps = 15/188 (7%)
Query: 1 MALWSAAKSFHVPA-NVGVLRRGASWAAGIAG-------------GKRSSPFACLSLSTD 46
MA W AA++FH+P N VL R ASWAAGI G KR+ PF C+SLSTD
Sbjct: 1 MASWCAARTFHIPPINAAVLHRRASWAAGIGGVSVAGTAMLRSSSSKRAMPFLCMSLSTD 60
Query: 47 TR-TKEAVQTEKAPAALGPYSQAIKANNLLFVSGVLGLDPETGKFISDNVEDQTEQILKN 105
TR KEAV TEKAPAALGPYSQAIKANNLLFVSGVLGL PETGKF+S++VEDQTEQ+LKN
Sbjct: 61 TRINKEAVSTEKAPAALGPYSQAIKANNLLFVSGVLGLVPETGKFVSEDVEDQTEQVLKN 120
Query: 106 MGEILKSGGASYTSVVKTTILLADLKDFKKVNEIYAKYFTSPAPARSTYQVAALPLDAKI 165
MGEILKSGGASY SVVKTTILLADLKDFKKVNEIYAKYF SPAPAR+TYQVAALPLDAKI
Sbjct: 121 MGEILKSGGASYASVVKTTILLADLKDFKKVNEIYAKYFPSPAPARATYQVAALPLDAKI 180
Query: 166 EIECIAAL 173
EIECIAAL
Sbjct: 181 EIECIAAL 188
>Medtr5g092740.1 | perchloric acid soluble translation
inhibitor-like protein | HC | chr5:40506263-40503258 |
20130731
Length = 191
Score = 249 bits (637), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 132/191 (69%), Positives = 147/191 (76%), Gaps = 18/191 (9%)
Query: 1 MALWSAAKSFHVPA-NVGVLRRGASWAA-----GIAGG----------KRSSPFACLSLS 44
MA F +PA N G+LR S ++GG KRS F CLS+S
Sbjct: 1 MASLCGPTCFTIPATNGGLLRHRTSLTTRRGCLSVSGGTSFFHTSPSSKRSLSFTCLSIS 60
Query: 45 TDTRT--KEAVQTEKAPAALGPYSQAIKANNLLFVSGVLGLDPETGKFISDNVEDQTEQI 102
+D+R KEAV+TEKAPAALGPYSQA K NN+LFVSGVLGL PETGKF+SDNVEDQTEQ+
Sbjct: 61 SDSRIGIKEAVETEKAPAALGPYSQANKVNNILFVSGVLGLVPETGKFVSDNVEDQTEQL 120
Query: 103 LKNMGEILKSGGASYTSVVKTTILLADLKDFKKVNEIYAKYFTSPAPARSTYQVAALPLD 162
LKNMGEILK+GGASY+SVVKTTI+LADLKDFKKVNEIYAKYF +P PARSTYQVAALPLD
Sbjct: 121 LKNMGEILKAGGASYSSVVKTTIMLADLKDFKKVNEIYAKYFPAPFPARSTYQVAALPLD 180
Query: 163 AKIEIECIAAL 173
AKIEIECIA L
Sbjct: 181 AKIEIECIATL 191
>Medtr1535s0010.1 | endoribonuclease L-PSP protein | LC |
scaffold1535:158-1149 | 20130731
Length = 264
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 48 RTKEAVQTEKAPAALGPYSQAIKANNLLFVSGVLGLDPE--TGKFISDNVEDQTEQILKN 105
R A+ + P A G ++ LLF+SG + LD TGK + ++E Q EQ+ +N
Sbjct: 132 RLPGAIGSPVTPIATGTIVES--DERLLFISGHIPLDKNDLTGKPVEGDLEVQLEQVFRN 189
Query: 106 MGEILKSGGASYTSVVKTT--ILLADLKDFKKVNEIYAKYFTSPAP 149
+ E L++ GAS+ +++K T I+ ++K + + +Y P
Sbjct: 190 LDETLRAAGASWENMLKMTYYIVGLEMKHMATIRVVRDRYINPDCP 235
>Medtr7g111650.2 | meiotically up-regulated protein 71-like protein
| HC | chr7:45841976-45835553 | 20130731
Length = 728
Score = 47.0 bits (110), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 58 APAALGPYSQAIKANNLLFVSGVLGLDPETGKFISDNVEDQTEQILKNMGEILKSGGASY 117
AP+ +GPYSQA +L ++G LGLDP T S + EQ LKN + KS S
Sbjct: 416 APSCIGPYSQATLHEGILHMAGQLGLDPPTMNLCSGGPGVELEQALKNSEAVAKSFNCSI 475
Query: 118 TS 119
++
Sbjct: 476 ST 477
>Medtr7g111650.4 | meiotically up-regulated protein 71-like protein
| HC | chr7:45841976-45835553 | 20130731
Length = 728
Score = 47.0 bits (110), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 58 APAALGPYSQAIKANNLLFVSGVLGLDPETGKFISDNVEDQTEQILKNMGEILKSGGASY 117
AP+ +GPYSQA +L ++G LGLDP T S + EQ LKN + KS S
Sbjct: 416 APSCIGPYSQATLHEGILHMAGQLGLDPPTMNLCSGGPGVELEQALKNSEAVAKSFNCSI 475
Query: 118 TS 119
++
Sbjct: 476 ST 477
>Medtr7g111650.5 | meiotically up-regulated protein 71-like protein
| HC | chr7:45841977-45835506 | 20130731
Length = 573
Score = 47.0 bits (110), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 58 APAALGPYSQAIKANNLLFVSGVLGLDPETGKFISDNVEDQTEQILKNMGEILKSGGASY 117
AP+ +GPYSQA +L ++G LGLDP T S + EQ LKN + KS S
Sbjct: 261 APSCIGPYSQATLHEGILHMAGQLGLDPPTMNLCSGGPGVELEQALKNSEAVAKSFNCSI 320
Query: 118 TS 119
++
Sbjct: 321 ST 322