Miyakogusa Predicted Gene

Lj6g3v0871210.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0871210.1 Non Characterized Hit- tr|I3S7M7|I3S7M7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,92.68,0.00000000000006, ,CUFF.58419.1
         (45 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g052260.1 | NADH:ubiquinone oxidoreductase 17.2 kDa subuni...    63   6e-11

>Medtr3g052260.1 | NADH:ubiquinone oxidoreductase 17.2 kDa subunit
          | HC | chr3:20691893-20685998 | 20130731
          Length = 183

 Score = 62.8 bits (151), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 28/41 (68%), Positives = 31/41 (75%)

Query: 1  MRRVFGRIAGLFSNRNFEGVDKAGNKYFTRKEQIDGSSNER 41
          MRRV G+I GLF+NR   GVDK GNKYFTR EQIDG   E+
Sbjct: 1  MRRVLGKITGLFTNRTMAGVDKTGNKYFTRNEQIDGIMKEK 41