Miyakogusa Predicted Gene

Lj6g3v0859010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0859010.1 tr|G7L214|G7L214_MEDTR Polypyrimidine
tract-binding protein-like protein OS=Medicago truncatula
GN=M,54.17,0.000002, ,105367_g.1
         (48 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g037350.1 | elongation factor 1-alpha | HC | chr5:16352334...    56   6e-09

>Medtr5g037350.1 | elongation factor 1-alpha | HC |
           chr5:16352334-16347397 | 20130731
          Length = 574

 Score = 56.2 bits (134), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 1/48 (2%)

Query: 1   MTENWLRWFRHVQRRHLEALVVRRIDNMILSSFKRGRGRPKMTLEDII 48
           + EN LRWF HV+RR ++A   RR+D M  S  KRGRGRP+ T+++ I
Sbjct: 496 LVENRLRWFGHVERRPVDAFA-RRVDQMEESQVKRGRGRPRKTIKETI 542