Miyakogusa Predicted Gene

Lj6g3v0857610.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0857610.1 tr|G7J004|G7J004_MEDTR Small heat shock protein
OS=Medicago truncatula GN=MTR_3g052760 PE=3 SV=1,76.79,0,no
description,NULL; HSP20,Alpha crystallin/Hsp20 domain; HEAT SHOCK
PROTEIN 26,NULL; SMALL HEAT-SHO,CUFF.58405.1
         (235 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g052760.1 | localized small heat shock protein | HC | chr3...   370   e-103
Medtr3g086050.1 | localized small heat shock protein | HC | chr3...   155   3e-38
Medtr3g092460.1 | cytosolic class II small heat-shock protein | ...   121   6e-28
Medtr3g092460.2 | cytosolic class II small heat-shock protein | ...   119   3e-27
Medtr0004s0510.2 | small heat shock protein | HC | scaffold0004:...    77   1e-14
Medtr0004s0510.1 | small heat shock protein | HC | scaffold0004:...    75   5e-14
Medtr4g010320.1 | hsp20/alpha crystallin family protein | HC | c...    56   3e-08
Medtr0361s0010.1 | heat shock protein HSP20, putative | LC | sca...    53   3e-07
Medtr1g076880.1 | 22.0 kDa class IV heat shock protein | HC | ch...    52   4e-07
Medtr1g015165.1 | cytosolic class II small heat-shock protein | ...    52   6e-07
Medtr7g102590.1 | hsp20/alpha crystallin family protein | HC | c...    51   1e-06
Medtr1g076910.1 | 22.0 kDa class IV heat shock protein | HC | ch...    50   2e-06
Medtr1g076860.1 | 22.0 kDa class IV heat shock protein | HC | ch...    48   7e-06

>Medtr3g052760.1 | localized small heat shock protein | HC |
           chr3:20878150-20879311 | 20130731
          Length = 235

 Score =  370 bits (949), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 183/237 (77%), Positives = 201/237 (84%), Gaps = 4/237 (1%)

Query: 1   MTYTLANMSVYAPTSC--RMNKLSSVKLLPLSRTRKRTFCNNVKAMAGDEASLQRAKLQQ 58
           M  TL NM  YAPTS   RMNK S+VK+  L RT+ RTFC NVKAMAGDEASLQRAK Q 
Sbjct: 1   MATTLPNMRFYAPTSSSSRMNKFSNVKMTTLPRTKNRTFCYNVKAMAGDEASLQRAK-QH 59

Query: 59  QLQPRMKGSQASPRVLLNQFPVARTLQQMMDTMDRIVENPLVYSGTSPLVVVGDDEYSKG 118
           QL P+MK SQ SPRVLLNQFPVART+QQMMDTMDRIVENPLVY+  SP +VV + E++KG
Sbjct: 60  QLPPKMKVSQTSPRVLLNQFPVARTVQQMMDTMDRIVENPLVYNDNSPWIVVENGEHNKG 119

Query: 119 KIPWAIKEGQKDYKMRFNMPGMSKNDVKVWIEENMLVVKAEKVSREQHHESQANGSEELS 178
           KIPWAIKEGQ DYK+RFNMPGM+K DVKVWIEE MLVVKAEKV+REQ H+ QANG  ELS
Sbjct: 120 KIPWAIKEGQNDYKIRFNMPGMNKKDVKVWIEEKMLVVKAEKVAREQ-HQGQANGRGELS 178

Query: 179 PEHEDWPANSYGRYNHRIALPEKIEFEKIMAQVKDGVLYITIPKANTSAKIIGIDVQ 235
            E EDWPANSYGRYNHRI+LPE IEFEKI AQV+DGVLY+TIPKA TSAK+IGIDVQ
Sbjct: 179 SEDEDWPANSYGRYNHRISLPENIEFEKIKAQVRDGVLYVTIPKAKTSAKVIGIDVQ 235


>Medtr3g086050.1 | localized small heat shock protein | HC |
           chr3:38935304-38936374 | 20130731
          Length = 221

 Score =  155 bits (392), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/213 (45%), Positives = 133/213 (62%), Gaps = 24/213 (11%)

Query: 34  KRTFCNNVKAMAG------DEASLQRAKLQQQLQPRMKGSQASPRVLLNQFPVARTLQQM 87
           ++T    V+AM G      D  S        Q QP+ +   A+P  L ++FP  RT+Q+M
Sbjct: 22  RQTHFFRVRAMTGEAREKLDHVSRSNNIKHHQSQPKKRVFPAAPIGLWDRFPTTRTVQEM 81

Query: 88  MDTMDRIVENPLVYSG----TSPLVV-VGDDEYSKGKIPWAIKEGQKDYKMRFNMPGMSK 142
           M+TM+ ++E+P   S     +SPL +        +G+ PW IKEG+ +YKMRF+MPGM+K
Sbjct: 82  METMESMMEDPFAMSTIEWPSSPLPIEGVGGYRRRGRTPWEIKEGESEYKMRFDMPGMNK 141

Query: 143 NDVKVWIEENMLVVKAEKVSREQHHESQANGSEELSPEHEDWPANSYGRYNHRIALPEKI 202
            DVKVW+EE MLVVKAEK  ++++ E             E+W + SYGRY+ RIALPE +
Sbjct: 142 EDVKVWVEEKMLVVKAEKAPKKKNDED------------EEW-SKSYGRYSSRIALPENV 188

Query: 203 EFEKIMAQVKDGVLYITIPKANTSAKIIGIDVQ 235
           +FE I A+VKDGVLYITIPKA T +K++ I VQ
Sbjct: 189 QFENIKAEVKDGVLYITIPKATTYSKVLDISVQ 221


>Medtr3g092460.1 | cytosolic class II small heat-shock protein | HC
           | chr3:42236545-42237854 | 20130731
          Length = 235

 Score =  121 bits (303), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 98/166 (59%), Gaps = 25/166 (15%)

Query: 70  SPRVLLNQFPVARTLQQMMDTMDRIVENPLVYSGTSPLVVVGDDEYSKGKIPWAIKEGQK 129
           SP  LL+ +   R+++QM+DTMDRI E+ + + G             + ++PW IK+ + 
Sbjct: 95  SPFGLLDPWSPMRSMRQMLDTMDRIFEDTMTFGG------------GEIRVPWDIKDEEN 142

Query: 130 DYKMRFNMPGMSKNDVKVWIEENMLVVKAEKVSREQHHESQANGSEELSPEHEDWPANSY 189
           + KMRF+MPG+SK DVKV +E ++LV+K++      H E         S E + W   SY
Sbjct: 143 EIKMRFDMPGLSKEDVKVSVENDVLVIKSD-----MHKEE--------SGEEDSWSRKSY 189

Query: 190 GRYNHRIALPEKIEFEKIMAQVKDGVLYITIPKANTSAKIIGIDVQ 235
             Y+ R+ LP+  E +K+ A++K+GVLYIT+PK     K+I + +Q
Sbjct: 190 SSYDTRLKLPDNCEKDKVKAELKNGVLYITVPKTKVERKVIDVQIQ 235


>Medtr3g092460.2 | cytosolic class II small heat-shock protein | HC
           | chr3:42236545-42237854 | 20130731
          Length = 266

 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 96/162 (59%), Gaps = 25/162 (15%)

Query: 74  LLNQFPVARTLQQMMDTMDRIVENPLVYSGTSPLVVVGDDEYSKGKIPWAIKEGQKDYKM 133
           LL+ +   R+++QM+DTMDRI E+ + + G             + ++PW IK+ + + KM
Sbjct: 130 LLDPWSPMRSMRQMLDTMDRIFEDTMTFGG------------GEIRVPWDIKDEENEIKM 177

Query: 134 RFNMPGMSKNDVKVWIEENMLVVKAEKVSREQHHESQANGSEELSPEHEDWPANSYGRYN 193
           RF+MPG+SK DVKV +E ++LV+K++      H E         S E + W   SY  Y+
Sbjct: 178 RFDMPGLSKEDVKVSVENDVLVIKSD-----MHKEE--------SGEEDSWSRKSYSSYD 224

Query: 194 HRIALPEKIEFEKIMAQVKDGVLYITIPKANTSAKIIGIDVQ 235
            R+ LP+  E +K+ A++K+GVLYIT+PK     K+I + +Q
Sbjct: 225 TRLKLPDNCEKDKVKAELKNGVLYITVPKTKVERKVIDVQIQ 266


>Medtr0004s0510.2 | small heat shock protein | HC |
           scaffold0004:246329-247295 | 20130731
          Length = 210

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 106/223 (47%), Gaps = 35/223 (15%)

Query: 21  LSSVKLLPLSRTRKRTFCNNVKAMA-----GDEASLQRAKLQQQLQPRMKGSQASPRVLL 75
           L S  L P++ +  R+F  N  AM       D++++  ++   +  PR +        + 
Sbjct: 15  LLSRSLRPVASSASRSF--NTNAMRQYDERSDDSNVADSRRADRSFPRTRRDDFLSGNVF 72

Query: 76  NQFPVARTLQQMMDTMDRIVENPLVYSGTSPLVVVGDDEYSKGKIPWAIKEGQKDYKMRF 135
           + F  +R+L Q+++ +D++++NP + +                +  W  KE +    +R 
Sbjct: 73  DPFSPSRSLSQVLNMVDQLMDNPFLSASRGI-------GAGGARRGWDAKETEDSLLLRL 125

Query: 136 NMPGMSKNDVKVWIEENMLVVKAEKVSREQHHESQANGSEELSPEHEDWPANSYGRYNHR 195
           +MPG+ K DVK+ +E+N L +K E     +  E  A                   R++ R
Sbjct: 126 DMPGLGKEDVKISVEQNTLTIKGEGAKESEEDEEGAR------------------RFSSR 167

Query: 196 IALPEKI-EFEKIMAQVKDGVLYITIPKANTSAK--IIGIDVQ 235
           I LPEK+ + ++I A++K+GVL + +PK     +  +I ++V+
Sbjct: 168 IDLPEKLYKIDQIKAEMKNGVLKVVVPKMKEEERNDVINVNVE 210


>Medtr0004s0510.1 | small heat shock protein | HC |
           scaffold0004:246154-247504 | 20130731
          Length = 209

 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 106/223 (47%), Gaps = 36/223 (16%)

Query: 21  LSSVKLLPLSRTRKRTFCNNVKAMA-----GDEASLQRAKLQQQLQPRMKGSQASPRVLL 75
           L S  L P++ +  R+F  N  AM       D++++  ++   +  PR +       V  
Sbjct: 15  LLSRSLRPVASSASRSF--NTNAMRQYDERSDDSNVADSRRADRSFPRTRRDDFLSDVF- 71

Query: 76  NQFPVARTLQQMMDTMDRIVENPLVYSGTSPLVVVGDDEYSKGKIPWAIKEGQKDYKMRF 135
           + F  +R+L Q+++ +D++++NP + +                +  W  KE +    +R 
Sbjct: 72  DPFSPSRSLSQVLNMVDQLMDNPFLSASRGI-------GAGGARRGWDAKETEDSLLLRL 124

Query: 136 NMPGMSKNDVKVWIEENMLVVKAEKVSREQHHESQANGSEELSPEHEDWPANSYGRYNHR 195
           +MPG+ K DVK+ +E+N L +K E     +  E  A                   R++ R
Sbjct: 125 DMPGLGKEDVKISVEQNTLTIKGEGAKESEEDEEGAR------------------RFSSR 166

Query: 196 IALPEKI-EFEKIMAQVKDGVLYITIPKANTSAK--IIGIDVQ 235
           I LPEK+ + ++I A++K+GVL + +PK     +  +I ++V+
Sbjct: 167 IDLPEKLYKIDQIKAEMKNGVLKVVVPKMKEEERNDVINVNVE 209


>Medtr4g010320.1 | hsp20/alpha crystallin family protein | HC |
           chr4:2337224-2335470 | 20130731
          Length = 231

 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 65/107 (60%), Gaps = 11/107 (10%)

Query: 121 PWA----IKEGQKDYKMRFNMPGMSKNDVKVWIEENMLVVKAEKVSREQHHESQANGSEE 176
           PW+    +KE    YK++++MPG+ K +V + I + +L +K E       H+ +  G  +
Sbjct: 119 PWSLSGRVKESDNHYKLKYDMPGIPKENVNITIGDGVLTIKGE-------HKEEKEGGGD 171

Query: 177 LSPEHEDWPANSYGRYNHRIALPEKIEFEKIMAQVKDGVLYITIPKA 223
              ++E + ++SYG YN  + LP+  + ++I A++KDGVL +TIP++
Sbjct: 172 DDDDNEYFSSSSYGYYNTSLVLPDDAKVDEIKAELKDGVLIVTIPRS 218


>Medtr0361s0010.1 | heat shock protein HSP20, putative | LC |
           scaffold0361:10863-8893 | 20130731
          Length = 190

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 15/128 (11%)

Query: 51  LQRAKLQQQLQPRMKGSQASPRVLLNQF------PVA--RTLQQMMDTMDRIVENPLVYS 102
           L R  L   +  R +   + PR   N F      P +  R+L Q+++ +D++++NP + +
Sbjct: 62  LTRPVLAATVSDRHRVDSSFPRTRRNDFLSDVFDPFSPTRSLSQVLNMVDQLMDNPFLSA 121

Query: 103 GTSPLVVVGDDEYSKGKIPWAIKEGQKDYKMRFNMPGMSKNDVKVWIEENMLVVKAEKVS 162
                  +GD    +G   W  KE +    +R +MPG+ K DVK  +E+N L +   +  
Sbjct: 122 SRG----IGDSGVRRG---WDAKETEDCLLLRLDMPGLGKEDVKFSVEQNTLTITGGRSH 174

Query: 163 REQHHESQ 170
              + ES+
Sbjct: 175 DWTNSESE 182


>Medtr1g076880.1 | 22.0 kDa class IV heat shock protein | HC |
           chr1:34311519-34312282 | 20130731
          Length = 193

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 62/107 (57%), Gaps = 12/107 (11%)

Query: 116 SKGKIPWAIKEGQKDYKMRFNMPGMSKNDVKVWIEENMLVVKAEKVSREQHHESQANGSE 175
           S  ++ W  KE  + + + F++PG+ K+++K+ +EEN ++    +VS E+  E +  G  
Sbjct: 73  SPARVDW--KETPEGHVIMFDVPGIRKDEIKIEVEENRVL----RVSGERKKEEEKQG-- 124

Query: 176 ELSPEHEDWPANSYGRYNHRIALPEKIEFEKIMAQVKDGVLYITIPK 222
               +H      SYG++  +  LPE ++ + + A++++GVL +T+ K
Sbjct: 125 ----DHWHRVERSYGKFWRQFRLPENVDLDSVKAKMENGVLTLTLNK 167


>Medtr1g015165.1 | cytosolic class II small heat-shock protein | HC
           | chr1:3745342-3744476 | 20130731
          Length = 160

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 11/142 (7%)

Query: 79  PVARTLQQMMDTMDRIVENPLVYSGTSPLVVVGDDEYSKGKIPWAIKEGQKDYKMRFNMP 138
           PV   L QMMD  D  +E     S  +P      D  +    P  IKE Q  Y    +MP
Sbjct: 11  PVLHALHQMMDLSDDNMEK--TSSHNAPTRSYVRDAKAMAATPADIKEDQNSYVFVIDMP 68

Query: 139 GMSKNDVKVWIEENMLVVKAEKVSREQHHESQANGSEELSPEHEDWPANSYGRYNHRIAL 198
           G+   D+KV +E++ ++V + +  RE+  E  A   + L  E         G++  +  L
Sbjct: 69  GLKSGDIKVQVEDDNVLVISGERKREEEKEGGA---KYLRMERR------VGKFMRKFVL 119

Query: 199 PEKIEFEKIMAQVKDGVLYITI 220
           PE    + + A  +DGVL +T+
Sbjct: 120 PENANTDAVSAVCQDGVLSVTV 141


>Medtr7g102590.1 | hsp20/alpha crystallin family protein | HC |
           chr7:41570229-41570612 | 20130731
          Length = 127

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 19/101 (18%)

Query: 123 AIKEGQKDYKMRFNMPGMSKNDVKVWIEENMLVVKAEKVSREQHHESQANGSEELSPEHE 182
            ++E +    +R + PG+ K DVK+ +E+N L +K E    ++  E +  G         
Sbjct: 30  GMRETKDSLLLRLDTPGLGKEDVKISVEQNTLTIKGE--GAKESEEVEEGGR-------- 79

Query: 183 DWPANSYGRYNHRIALPEKI-EFEKIMAQVKDGVLYITIPK 222
                   +++ RI LPEK+ + ++I A++K+GVL + +PK
Sbjct: 80  --------KFSSRIDLPEKLYKIDQIKAEMKNGVLKVIVPK 112


>Medtr1g076910.1 | 22.0 kDa class IV heat shock protein | HC |
           chr1:34323349-34322497 | 20130731
          Length = 196

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 60/107 (56%), Gaps = 12/107 (11%)

Query: 116 SKGKIPWAIKEGQKDYKMRFNMPGMSKNDVKVWIEENMLVVKAEKVSREQHHESQANGSE 175
           S  ++ W  KE    + +  ++PG+ K+++K+ +EEN ++    +VS E+  E +  G  
Sbjct: 76  SPARVDW--KETPDGHVIMLDVPGIRKDEIKIEVEENRVL----RVSGERKKEEEKQG-- 127

Query: 176 ELSPEHEDWPANSYGRYNHRIALPEKIEFEKIMAQVKDGVLYITIPK 222
               +H      SYG++  +  LPE ++ + + A++++GVL +T+ K
Sbjct: 128 ----DHWHRVERSYGKFWRQFRLPENVDLDSVKAKMENGVLTLTLNK 170


>Medtr1g076860.1 | 22.0 kDa class IV heat shock protein | HC |
           chr1:34305080-34304216 | 20130731
          Length = 194

 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 16/119 (13%)

Query: 119 KIPWAIKEGQKDYKMRFNMPGMSKNDVKVWIEENMLVVKAEKVSREQHHESQANGSEELS 178
           K+ W  KE  + + +  ++PG+ K+++K+ +EEN ++    +V  E+  E +  G     
Sbjct: 69  KVDW--KETPEGHVITMDVPGLRKDEIKIEVEENSVL----RVIGERKKEVEKKGDRWHR 122

Query: 179 PEHEDWPANSYGRYNHRIALPEKIEFEKIMAQVKDGVLYITIPKAN----TSAKIIGID 233
            E       SYG++  +  LPE  + + + A++++GVL +T+ K +     S +++ ID
Sbjct: 123 AER------SYGKFWRQFRLPENADLDSVKAKIENGVLTLTLNKLSHDQIKSTRVVSID 175