Miyakogusa Predicted Gene

Lj6g3v0856580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0856580.1 Non Characterized Hit- tr|I1KYB1|I1KYB1_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,86.89,0,PROLINE
SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN,Uncharacterised
protein family UPF0001; ,CUFF.58400.1
         (245 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g053230.1 | proline synthetase associated protein | HC | c...   450   e-127
Medtr2g024060.1 | proline synthetase associated protein | HC | c...   347   7e-96

>Medtr3g053230.1 | proline synthetase associated protein | HC |
           chr3:21149543-21142887 | 20130731
          Length = 244

 Score =  450 bits (1158), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 217/244 (88%), Positives = 226/244 (92%)

Query: 1   MASPVMAEGVAVTALRSVILRVQQAAERAGSKPDRVRVVAVSKTKPISMIRQLYDAGHRC 60
           M SPVMAE  AV A RSV+LRVQQAAER+G+KPDRVRVVAVSKTKPISMIRQLYDAGHR 
Sbjct: 1   MTSPVMAEAAAVLAFRSVMLRVQQAAERSGTKPDRVRVVAVSKTKPISMIRQLYDAGHRV 60

Query: 61  FGENYVQEIVDKAPQLPQDIDWHFIGHLQSNKVKTLLGGVPNLAMVEGVDNPKVANHLDR 120
           FGENYVQEIV+KAPQLPQDI WHFIGHLQSNK KTLL GVPNLAMVEGVDN KVAN+LDR
Sbjct: 61  FGENYVQEIVEKAPQLPQDIQWHFIGHLQSNKAKTLLSGVPNLAMVEGVDNQKVANNLDR 120

Query: 121 MVSTLGRNPLKVLVQVNTSGEESKSGVDPSNCVELAKHVKDSCPNLVFSGLMTIGMLDYT 180
           MVS LGRN L+VLVQVNTSGEESKSGVDPS+CV+LAKHVK SCPNL FSGLMTIGM DYT
Sbjct: 121 MVSNLGRNRLRVLVQVNTSGEESKSGVDPSDCVDLAKHVKLSCPNLEFSGLMTIGMPDYT 180

Query: 181 STPQNFQALSNCRTEVCKALEMDEEQCELSMGMSGDFELAIEMGSTNVRVGSTIFGPREY 240
           STPQNF  LSNCRTEVCKALEMDEEQCELSMGMSGDFELAIE GSTNVRVGSTIFGPREY
Sbjct: 181 STPQNFWTLSNCRTEVCKALEMDEEQCELSMGMSGDFELAIESGSTNVRVGSTIFGPREY 240

Query: 241 AKKK 244
           AKK+
Sbjct: 241 AKKQ 244


>Medtr2g024060.1 | proline synthetase associated protein | HC |
           chr2:8557801-8560446 | 20130731
          Length = 244

 Score =  347 bits (890), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 156/239 (65%), Positives = 195/239 (81%)

Query: 7   AEGVAVTALRSVILRVQQAAERAGSKPDRVRVVAVSKTKPISMIRQLYDAGHRCFGENYV 66
           ++G A  +L++V+ RV  AAER+      +RVVA SKTK +SM+RQ+YDAGHRCFGENYV
Sbjct: 5   SQGGAAASLKAVLDRVHHAAERSSRDVKEIRVVAASKTKSVSMLRQVYDAGHRCFGENYV 64

Query: 67  QEIVDKAPQLPQDIDWHFIGHLQSNKVKTLLGGVPNLAMVEGVDNPKVANHLDRMVSTLG 126
           QEI++KAPQLP+DI+WHFIG+LQSNKVK LL GVPNLA VE VD+ K+AN LDR ++ +G
Sbjct: 65  QEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLAGVPNLAYVESVDDEKIANLLDRAIAKIG 124

Query: 127 RNPLKVLVQVNTSGEESKSGVDPSNCVELAKHVKDSCPNLVFSGLMTIGMLDYTSTPQNF 186
           R PLKV V+VNTSGE SK GV+P+ C++L KH+  +CPNL F GLMTIGMLDY+STP+NF
Sbjct: 125 RKPLKVFVEVNTSGETSKFGVEPAQCLDLVKHIFTNCPNLEFCGLMTIGMLDYSSTPENF 184

Query: 187 QALSNCRTEVCKALEMDEEQCELSMGMSGDFELAIEMGSTNVRVGSTIFGPREYAKKKE 245
           + LS CR+E+C AL + E QCELSMGM+ DFE AIEMGST VR+G+ IFG REY +K+E
Sbjct: 185 KTLSKCRSEICAALGISETQCELSMGMTADFEQAIEMGSTTVRIGTAIFGAREYPQKEE 243