Miyakogusa Predicted Gene

Lj6g3v0855550.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0855550.1 Non Characterized Hit- tr|K4B9W3|K4B9W3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,36.59,3e-19,seg,NULL; Stig1,Stigma-specific protein
Stig1,CUFF.58395.1
         (168 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g044463.1 | STIG1 | HC | chr4:15131171-15130088 | 20130731      137   6e-33
Medtr3g053240.1 | STIG1 | HC | chr3:21154435-21153847 | 20130731      135   1e-32
Medtr2g100600.1 | STIG1 | HC | chr2:43246745-43246014 | 20130731       51   5e-07
Medtr2g024010.1 | STIG1 | HC | chr2:8533106-8532445 | 20130731         48   4e-06

>Medtr4g044463.1 | STIG1 | HC | chr4:15131171-15130088 | 20130731
          Length = 156

 Score =  137 bits (344), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 83/171 (48%), Positives = 94/171 (54%), Gaps = 18/171 (10%)

Query: 1   MGFLKAIFVITITMALSIAALVTMKNITTTKEESAKPF---LPSDSQPLMAHEKNTLLPS 57
           MGFLKAI +I ITMALS+   +TMK IT  + +S       L    QPL+ HEKN  LPS
Sbjct: 1   MGFLKAIIIIAITMALSLT--ITMKTITQNEPKSLSVHHDSLSQGQQPLILHEKNKFLPS 58

Query: 58  KRVSRFLAQKPAYPYPYPDASNYPVVHCQKDNEIXXXXXXXXXXXXXXXXXXMDVSYDKH 117
           KRVSR LAQ P  P           +HC K +EI                  +D+ YDKH
Sbjct: 59  KRVSRLLAQNPNAP-----------IHCHKQDEICDLYGAKNATCCNNKC--IDLGYDKH 105

Query: 118 NCGAXXXXXXXXXXXXRGQCVDINFDKRHCGGCNNRCETGQYCTYGMCGYA 168
           NCGA            RG CVD N+DKRHCGGCN RCE GQYC YGMC YA
Sbjct: 106 NCGACKKHCKYTQTCCRGACVDTNYDKRHCGGCNVRCEIGQYCVYGMCDYA 156


>Medtr3g053240.1 | STIG1 | HC | chr3:21154435-21153847 | 20130731
          Length = 151

 Score =  135 bits (341), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/168 (48%), Positives = 95/168 (56%), Gaps = 17/168 (10%)

Query: 1   MGFLKAIFVITITMALSIAALVTMKNITTTKEESAKPFLPSDSQPLMAHEKNTLLPSKRV 60
           M FLKAI +I IT+ALS+   +TMK I   + + A   L  + QPL+ HEKN  LPSKRV
Sbjct: 1   MRFLKAIIIIAITLALSLT--ITMKTIKHNESKPASIHL--EKQPLILHEKNKFLPSKRV 56

Query: 61  SRFLAQKPAYPYPYPDASNYPVVHCQKDNEIXXXXXXXXXXXXXXXXXXMDVSYDKHNCG 120
           SR LAQ P  P           +HC K +EI                  +D++YDKHNCG
Sbjct: 57  SRLLAQNPNAP-----------IHCHKQDEICYLYGAKNATCCNNKC--IDLAYDKHNCG 103

Query: 121 AXXXXXXXXXXXXRGQCVDINFDKRHCGGCNNRCETGQYCTYGMCGYA 168
           A            RGQCVD N+DKRHCG CNNRCE GQYC YGMC YA
Sbjct: 104 ACKKHCKYTQTCCRGQCVDTNYDKRHCGECNNRCEIGQYCVYGMCDYA 151


>Medtr2g100600.1 | STIG1 | HC | chr2:43246745-43246014 | 20130731
          Length = 134

 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 67/168 (39%), Gaps = 34/168 (20%)

Query: 1   MGFLKAIFVITITMALSIAALVTMKNITTTKEESAKPFLPSDSQPLMAHEKNTLLPSKRV 60
           M F+K +F++T+ MAL     +T+ + T++K E                E N+L   +  
Sbjct: 1   MKFIKTLFLVTLLMAL---GAITLSSATSSKNE----------------EPNSL---QGT 38

Query: 61  SRFLAQKPAYPYPYPDASNYPVVHCQKDNEIXXXXXXXXXXXXXXXXXXMDVSYDKHNCG 120
           S FL++K           N   V C K  +I                    +  D  NCG
Sbjct: 39  SHFLSRK----------QNRISVSCNKYPKICNIKGSPGPNCCNNNCVNFSI--DMFNCG 86

Query: 121 AXXXXXXXXXXXXRGQCVDINFDKRHCGGCNNRCETGQYCTYGMCGYA 168
                         G+CV+   +++HCG C N+C+    C YGMC YA
Sbjct: 87  RCGKKCSFPKICCEGKCVNPRSNEKHCGKCGNKCDNRGSCVYGMCRYA 134


>Medtr2g024010.1 | STIG1 | HC | chr2:8533106-8532445 | 20130731
          Length = 135

 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 31/59 (52%)

Query: 110 MDVSYDKHNCGAXXXXXXXXXXXXRGQCVDINFDKRHCGGCNNRCETGQYCTYGMCGYA 168
           ++ + D  NCG              G+CV+   +K+HCG C N+CE+   C YGMC YA
Sbjct: 77  VNFTIDMFNCGRCGKKCSFPKICCEGKCVNPRSNKKHCGKCGNKCESRGSCVYGMCSYA 135