Miyakogusa Predicted Gene

Lj6g3v0820190.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0820190.1 tr|I1N0J3|I1N0J3_SOYBN GrpE protein homolog
OS=Glycine max GN=Gma.3177 PE=3 SV=1,74.06,0,seg,NULL; no
description,GrpE nucleotide exchange factor, coiled-coil; no
description,GrpE nucleotid,CUFF.58367.1
         (284 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g054220.1 | co-chaperone GrpE family protein | HC | chr3:2...   381   e-106
Medtr5g093770.1 | co-chaperone GrpE family protein | HC | chr5:4...   281   4e-76
Medtr7g087250.1 | co-chaperone GrpE family protein | HC | chr7:3...    63   3e-10
Medtr3g073450.1 | co-chaperone GrpE family protein | HC | chr3:3...    49   6e-06

>Medtr3g054220.1 | co-chaperone GrpE family protein | HC |
           chr3:21503466-21508219 | 20130731
          Length = 300

 Score =  381 bits (979), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 204/297 (68%), Positives = 231/297 (77%), Gaps = 17/297 (5%)

Query: 1   MLRVLSRASRSFMLLSASHKXXXXXXXXXXXXXXXIVHQSPNKLIPLQVNLLNRSMNSSL 60
           + RVLSRASR+F LLSASHK                 HQ PNKLIP+Q NLL   ++SSL
Sbjct: 3   VYRVLSRASRTFTLLSASHKPQPLSTNFFHQFST-FPHQLPNKLIPIQANLLYSPISSSL 61

Query: 61  TPIFGFS--------------SSASPEPESQNEQDKAAADQTKEPDAEPESECDNLSRDD 106
           TP FGFS              +S   +   QNE+DK    Q+ E D++ E ECD LSRD+
Sbjct: 62  TPRFGFSSSASPESSSDDPAKTSEKAKVVDQNEEDKREG-QSSESDSDVEIECD-LSRDE 119

Query: 107 LIKLVAEKEELLKSKQEDIVEMKDKVMRSYAEMENVLSRTRRDAENSKKFAIQNFAKGLL 166
           LIKLV EKE LLK K +++ +M+DKV+R+YAEMENV+ RT R+AE+SKKFAIQ+FAK LL
Sbjct: 120 LIKLVTEKEALLKLKHKEVEKMQDKVLRTYAEMENVMDRTNRNAESSKKFAIQSFAKSLL 179

Query: 167 DVADNLGRASSVVKDSFSKIESPNDSVEAAKLLKTLLEGVEMTEKQLAEVLKKHGVEKYD 226
           DVADNLGRASSVVKDSFSKIESP +S +AA LLKTLLEGVEMTEKQLAEVLKKHGVEKYD
Sbjct: 180 DVADNLGRASSVVKDSFSKIESPKESDQAAPLLKTLLEGVEMTEKQLAEVLKKHGVEKYD 239

Query: 227 PTNEPFDPNRHNAIFQIPDASKPPGTVGVVLKAGYMLYDRVLRPAEVGVTQEVEDNN 283
           PTNEPFDPNRHNAIFQIPDASKPPGTVGVVLKAGYMLYDRVLRPAEVGVT EVE++N
Sbjct: 240 PTNEPFDPNRHNAIFQIPDASKPPGTVGVVLKAGYMLYDRVLRPAEVGVTHEVEEDN 296


>Medtr5g093770.1 | co-chaperone GrpE family protein | HC |
           chr5:40939973-40943162 | 20130731
          Length = 311

 Score =  281 bits (720), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 169/292 (57%), Positives = 202/292 (69%), Gaps = 52/292 (17%)

Query: 44  LIPLQVNLLNRSMNSSLTPIFGFSSSASPEPESQNEQD---------------------- 81
           L P+QVN L  S+NSS T  FGFSSSAS E E +   +                      
Sbjct: 19  LFPVQVNFLCPSINSS-TSKFGFSSSASVETEGKEGNNVHNGNFTSADPAKTSEEAEEID 77

Query: 82  ----KAAADQTKEPDA-EPESECDNLSR-----------------------DDLIKLVAE 113
                 +ADQT+E  +   +S    + R                       DDLIKLVAE
Sbjct: 78  QPGQAKSADQTEESGSISADSHSQTVKRRRRSIKRTAFSDSDSDSESDLSRDDLIKLVAE 137

Query: 114 KEELLKSKQEDIVEMKDKVMRSYAEMENVLSRTRRDAENSKKFAIQNFAKGLLDVADNLG 173
           KEELLK K+++I +M+DKV+R+YAEMENV+ RTRR+AENS+KFAIQNFAK LLDVADNLG
Sbjct: 138 KEELLKLKKKEIEKMQDKVLRTYAEMENVMDRTRREAENSRKFAIQNFAKSLLDVADNLG 197

Query: 174 RASSVVKDSFSKIESPNDS-VEAAKLLKTLLEGVEMTEKQLAEVLKKHGVEKYDPTNEPF 232
           RASSVVK+SFSKI++ +DS  EA KLLKTLLEGVEMTEKQL+E LKK GVEK+DPTNEPF
Sbjct: 198 RASSVVKESFSKIDTSSDSSAEAVKLLKTLLEGVEMTEKQLSEALKKFGVEKFDPTNEPF 257

Query: 233 DPNRHNAIFQIPDASKPPGTVGVVLKAGYMLYDRVLRPAEVGVTQEVEDNNS 284
           DP+RHNA+F++PD SKPPGTV  VLKAGY+L+DRV+RPAEVGVTQ  E+ NS
Sbjct: 258 DPHRHNAVFKVPDGSKPPGTVAAVLKAGYLLHDRVIRPAEVGVTQAKENGNS 309


>Medtr7g087250.1 | co-chaperone GrpE family protein | HC |
           chr7:33973420-33978130 | 20130731
          Length = 335

 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 83/189 (43%), Gaps = 28/189 (14%)

Query: 102 LSRDDLIKLVAEKEELLKSKQEDIVEM--------------KDKVMRSYAEMENVLSRTR 147
           L+ +D +K VAE E  LKS  ++IV +              KD+ +R  A+ +N   RT 
Sbjct: 123 LANNDSVK-VAELESSLKSIDDEIVGLEGKIASLSEELSIEKDRKLRIGADFDNYRKRTD 181

Query: 148 RDAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSFSKIESPNDSVEAAKLLKTLLEGVE 207
           RD  +    A     + LL V DN  RA + +K      E  N+S ++            
Sbjct: 182 RDRLSLVTNAQGEVVESLLPVLDNFERAKAQIKVETEGEEKINNSYQSIY---------- 231

Query: 208 MTEKQLAEVLKKHGVEKYDPTNEPFDPNRHNAIFQIPDASKPPGTVGVVLKAGYMLYDRV 267
              KQ  E+L   GVE  D    PFDP  H AI +        G +    + G+ L DR+
Sbjct: 232 ---KQFIEILNSLGVEPVDTVGNPFDPMLHEAIMREDSDEFEDGIILQEFRKGFKLGDRL 288

Query: 268 LRPAEVGVT 276
           LRP+ V V+
Sbjct: 289 LRPSMVKVS 297


>Medtr3g073450.1 | co-chaperone GrpE family protein | HC |
           chr3:33122256-33126357 | 20130731
          Length = 304

 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 13/153 (8%)

Query: 124 DIVEMKDKVMRSYAEMENVLSRTRRDAENSKKFAIQNFAKGLLDVADNLGRASSVVKDSF 183
           D V  K++ +R  A+ +N   R  ++  + +  A Q F K LL + D+  R    ++   
Sbjct: 137 DKVSCKEQYLRLQADFDNFRKRCEKERISIQSDAQQEFVKKLLLMVDSFERVKQQIEAET 196

Query: 184 SKIESPNDSVEAAKLLKTLLEGVEMTEKQLAEVLKKHGVEKYDPTNEPFDPNRHNAIFQI 243
            K +  + S ++               KQ  E L+ H V       +PF+P  H A+ + 
Sbjct: 197 EKEKKIDASYQS-------------LYKQFVETLRSHHVSVVATVGKPFNPLLHEAVGRE 243

Query: 244 PDASKPPGTVGVVLKAGYMLYDRVLRPAEVGVT 276
                  G +    + G+ML D+V+RPA V V+
Sbjct: 244 ESEVFKEGIIIKESRRGFMLKDKVVRPALVKVS 276