Miyakogusa Predicted Gene

Lj6g3v0820170.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v0820170.1 tr|Q9FLP2|Q9FLP2_ARATH At5g55210 OS=Arabidopsis
thaliana GN=At5g55210 PE=2 SV=1,38.86,4e-19,seg,NULL,CUFF.58362.1
         (174 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g054230.1 | hypothetical protein | HC | chr3:21514592-2150...   219   1e-57
Medtr2g025490.1 | hypothetical protein | HC | chr2:9103841-90975...    91   5e-19

>Medtr3g054230.1 | hypothetical protein | HC |
           chr3:21514592-21509410 | 20130731
          Length = 160

 Score =  219 bits (557), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 110/170 (64%), Positives = 127/170 (74%), Gaps = 11/170 (6%)

Query: 1   MEAVGSTRLGRATSRYGAPAVFSGPVRKWKKKWIHVTPXXXXXXXXXXXXXXXXKPSSRL 60
           ME VGSTRLGRA+SRYGAPAVF+GPVRKW+KKW+HV+P                K  SRL
Sbjct: 1   METVGSTRLGRASSRYGAPAVFNGPVRKWEKKWVHVSPSSFNNNKKNNKDNSNEK--SRL 58

Query: 61  LLRRWTPITXXXXXXXXXXXXXDNVSDEPPKRKFRYTPIAVLEEQKKG-VEKSEHEPTSE 119
           LLRRWTP+              ++VSDEPP+RKFRYTPIA LEEQKKG VEK EHE T E
Sbjct: 59  LLRRWTPVANSSSA--------EDVSDEPPRRKFRYTPIAALEEQKKGAVEKVEHESTIE 110

Query: 120 SDKLTAKQINATQEVHGKLNMNEISEESKDSNMSKLDLGFDLQGNNGENS 169
           SD++TA+Q N   EVHGKLNMNE+SE++KDSNM++LDLGFD QGNNGENS
Sbjct: 111 SDQVTARQTNVNHEVHGKLNMNEVSEDTKDSNMNELDLGFDFQGNNGENS 160


>Medtr2g025490.1 | hypothetical protein | HC | chr2:9103841-9097566
           | 20130731
          Length = 208

 Score = 90.9 bits (224), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 82/163 (50%), Gaps = 23/163 (14%)

Query: 1   MEAVGSTRLGRATSRYGAPAVFSGPVRKWKKKWIHVTPXXXXXXXXXXXXXXXXKP---- 56
           ME VG+ RLGR+++RYG   VF+GPVRKWKKKW+HV P                      
Sbjct: 1   MEGVGA-RLGRSSTRYGPATVFTGPVRKWKKKWVHVLPSSSSSNSNNNNANQNHANGSNG 59

Query: 57  --SSRLLLRRWTPITXXXXXXXXXXXXXDNVSD-------EPPKRKFRYTPIAVLEEQK- 106
              S LLL +WTPIT              +V D       EPP+RKF+Y P+AVLEEQK 
Sbjct: 60  NNGSHLLLFKWTPITQSQNNANGNGNG--SVKDAAVEPVEEPPRRKFKYVPVAVLEEQKN 117

Query: 107 -----KGVEKSEHEPTS-ESDKLTAKQINATQEVHGKLNMNEI 143
                +  EK E E    E+D   A+  +  + +  K ++N++
Sbjct: 118 EATEDEVAEKVEDESNPIEADSSAAEPTSKNETLDEKPDINDV 160