Miyakogusa Predicted Gene
- Lj6g3v0819090.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v0819090.1 Non Characterized Hit- tr|I1J9U5|I1J9U5_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,84.97,0,tRNA-synt_1,Aminoacyl-tRNA synthetase, class Ia;
Anticodon_1,Valyl/Leucyl/Isoleucyl-tRNA synthetase,,CUFF.58354.1
(1086 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g006450.1 | leucyl-tRNA synthetase | HC | chr7:698037-7039... 1723 0.0
Medtr3g058530.1 | leucyl-tRNA synthetase, putative | HC | chr3:2... 948 0.0
Medtr3g058540.1 | leucyl-tRNA synthetase | HC | chr3:23262925-23... 813 0.0
Medtr6g027620.1 | valyl-tRNA synthetase/valine-tRNA ligase | HC ... 63 2e-09
Medtr4g132500.2 | leucyl-tRNA synthetase | HC | chr4:55397369-55... 50 9e-06
Medtr4g132500.1 | leucyl-tRNA synthetase | HC | chr4:55397313-55... 50 9e-06
>Medtr7g006450.1 | leucyl-tRNA synthetase | HC | chr7:698037-703921 |
20130731
Length = 1102
Score = 1723 bits (4462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 833/1100 (75%), Positives = 923/1100 (83%), Gaps = 16/1100 (1%)
Query: 2 AASDGGGKSTARRDHLREIEVKVQKWWEDSNVFAAEPGDAPPKPGEKFFGTFPFPYMNGY 61
A+S+ K RRD LREIE KV+KWWE+ +VF +EPG+ PPKPGEKFFG FPFPY NGY
Sbjct: 4 ASSNVSKKCFDRRDRLREIESKVKKWWEEEDVFKSEPGENPPKPGEKFFGNFPFPYTNGY 63
Query: 62 LHLGHAFSLSKLEFAAAFHRLKGANVLLPFAFHCTGMPIKASADKLAREIQRFGXX---- 117
LHLGHAFSLSKLEFAAAF+RL+GANVLLPFAFHCTGMP+K SADKLAREIQ+FG
Sbjct: 64 LHLGHAFSLSKLEFAAAFYRLRGANVLLPFAFHCTGMPMKTSADKLAREIQQFGNPPVFP 123
Query: 118 XXXXXXXXXXXXXXXXXXXANXXXXXXXXXXXXXXXXXXXXQVYQWEIMRSVGISDDEIS 177
A Q YQWEI+RSVGISD+EIS
Sbjct: 124 GVQEDNAMGAEGASDDDSNAKPSVNNKYKGKKSKAAAKSSGQAYQWEILRSVGISDEEIS 183
Query: 178 KFQDPYKWLSYFPPLAVEDLKAFGLGCDWRRSFITTDMNPYFDSFVRWQVRKLKSMGKIV 237
KFQDPYKWL+YFPPLAVEDLKAFGLGCDWRRSFITTDMNPYFDSFVRWQ+RKLKS+GK+V
Sbjct: 184 KFQDPYKWLTYFPPLAVEDLKAFGLGCDWRRSFITTDMNPYFDSFVRWQMRKLKSLGKVV 243
Query: 238 KDVRYTIFSPLDGQPCADHDRASGEGVQPQEYTIIKMXXXXXXXXXXXXLEGKKVFLAAA 297
KDVRYTIFSPLDGQPCADHDRASGEGVQPQEY IIKM LEGKKVFLAAA
Sbjct: 244 KDVRYTIFSPLDGQPCADHDRASGEGVQPQEYMIIKMELVSPFPDKFKALEGKKVFLAAA 303
Query: 298 TLRPETMYGQTNAWVLPDGKYGAFEINETEVFVMSHRAALNLAYQNHSRVPEKPTCLLEL 357
TLRPETMYGQTNAWVLPDGKYGAFEI ETEVFV++HRAALNLAYQNHSRVP++PTCLLEL
Sbjct: 304 TLRPETMYGQTNAWVLPDGKYGAFEITETEVFVLTHRAALNLAYQNHSRVPQEPTCLLEL 363
Query: 358 TGYDLIGLPLKSPLSVNDTIYALPMLSILMDKGTGAVTSVPSDAPDDYMALLDLKSKPAF 417
TG+DLIGL L+SPL++ + I+ LPMLSILM+KGTG VTSVPSDAPDDYMAL LK KP F
Sbjct: 364 TGHDLIGLLLRSPLALTEVIFVLPMLSILMNKGTGVVTSVPSDAPDDYMALKHLKKKPEF 423
Query: 418 RAKYGVKDEWVMPFEIVPIIEVPEFGNKCAETVCLQMKIKSQNEKEKLAEAKKQTYLKGF 477
RAKYGVKDEWVMPF+IVPIIEVPEFGNKCAETVCLQMKI+S NE+ KLA+AK TYLKGF
Sbjct: 424 RAKYGVKDEWVMPFDIVPIIEVPEFGNKCAETVCLQMKIESPNERVKLADAKDITYLKGF 483
Query: 478 TEGTMIVGEFTGRKVQEAKPLIRSMLLDSGHAIVYSEPEKRVISRSGDECVVALTDQWYI 537
++G +IVGEF GRKVQEAKPLIR LL++G AIVYSEPE+ V+SRSGDECVVALTDQWYI
Sbjct: 484 SQGIIIVGEFKGRKVQEAKPLIRRKLLETGQAIVYSEPERPVMSRSGDECVVALTDQWYI 543
Query: 538 TYGESEWKKLAEECLSSMSLFSDETRHGFEHTLSWLNQWACSRSFGLGTRIPWDDQFLVE 597
TYGESEWKKLAE+CLSSM+L+SDET++GF+HTLSWLNQWACSRSFGLGTRIPWD+QFLVE
Sbjct: 544 TYGESEWKKLAEDCLSSMNLYSDETQNGFDHTLSWLNQWACSRSFGLGTRIPWDEQFLVE 603
Query: 598 SLSDSTIYMAYYTVVHYLQNGDMYGSSESVIKPQQLTDDVWDYIFCDGPFPKSTDISSSL 657
SLSDSTIYMAYYTV H+LQNGDMYG++ES IKPQQLTDDVWDYIFC GPFPKSTDISS++
Sbjct: 604 SLSDSTIYMAYYTVAHHLQNGDMYGTNESAIKPQQLTDDVWDYIFCGGPFPKSTDISSTV 663
Query: 658 LGRMKKEFEYWYPLDLRVSGKDLIQNHLTFCIYNHTAIMSKHHWPRGFRCNGHIMLNKAK 717
L RMK EFEYWYP DLRVSGKDL+QNHLTFCIYNHTAI SK HWPRGFRCNG ++LNK K
Sbjct: 664 LERMKLEFEYWYPFDLRVSGKDLLQNHLTFCIYNHTAIWSKRHWPRGFRCNGFLLLNKEK 723
Query: 718 MSKSSGNFRTIRQAIEEFSADATRFSLAYAGDGVDDANFDFMTVDTAIKRLTKEIAWYEE 777
MSKS+GNFRT+RQAIEEFSADATRF+LA AGDGVDDANF F + AI LT++IAWYE+
Sbjct: 724 MSKSTGNFRTLRQAIEEFSADATRFALADAGDGVDDANFVFEKANKAILDLTQQIAWYEK 783
Query: 778 ILAAESSMRTGPPSTFADCVFANEINIAVKTTEQNYSNYMFREALISGFFNLQTARDEYR 837
I A+SSMRTG PST+AD VFANEINIA+KTTEQNY+N+MFREAL+SGF+ LQ ARDEYR
Sbjct: 784 IQDAKSSMRTGAPSTYADRVFANEINIAIKTTEQNYTNFMFREALVSGFYGLQAARDEYR 843
Query: 838 LSC------GVGGYNRELLWRFMDVQTRLLAPICPHYAEFIWRELLKKDGFVVKAGWPTA 891
L+ V YN+EL+W FMDVQTRLLAPICPHYAEFIWRE+LKK+GFVVKAGWPTA
Sbjct: 844 LTYKENNQDNVKDYNQELVWHFMDVQTRLLAPICPHYAEFIWREILKKEGFVVKAGWPTA 903
Query: 892 EAPDLTLKSANTYLQGSIVLMRXXXXXXXXXXXXTNKKGAPVASLTENKVTGLVYVKEQF 951
+APDLTLKSAN YLQ SI +R NK+GA +L ENK+T L++V EQF
Sbjct: 904 DAPDLTLKSANKYLQDSIDSIRKLLEKKIPGSKKANKQGALATALKENKITCLIFVNEQF 963
Query: 952 DGWKAECLNILQNKFNRDTRTFAPESEILEALQHSSVGQSSNSEQIQKQCRPFLKFMKDE 1011
DGWKA CL+ILQNKFNRDTRTFAP SEILEA++ SSVGQS + +QIQK C PFLKF KDE
Sbjct: 964 DGWKAVCLSILQNKFNRDTRTFAPHSEILEAIRQSSVGQSFDFKQIQKICNPFLKFKKDE 1023
Query: 1012 AIKLGAQALDLRLPFGEMEVLRENLDLIKRQIA-----LEHVEILSVADAGSVAKAGSLA 1066
AI LG QALDLRLPFGE+EVLREN D IKRQI+ ++ VEILS ADA SVAKAGS +
Sbjct: 1024 AIALGEQALDLRLPFGEIEVLRENKDFIKRQISSKELVVQDVEILSAADADSVAKAGS-S 1082
Query: 1067 SLLNQNPPSPGNPTAIFLIQ 1086
S LNQNPPSPG PT IFL Q
Sbjct: 1083 SSLNQNPPSPGVPTVIFLTQ 1102
>Medtr3g058530.1 | leucyl-tRNA synthetase, putative | HC |
chr3:23258699-23255843 | 20130731
Length = 570
Score = 948 bits (2450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/568 (79%), Positives = 492/568 (86%), Gaps = 3/568 (0%)
Query: 520 ISRSGDECVVALTDQWYITYGESEWKKLAEECLSSMSLFSDETRHGFEHTLSWLNQWACS 579
+SRSGDECVVALTDQWYITYGESEWK+L +ECLS+MSL+ DETRHGFEHTL WLNQWACS
Sbjct: 1 MSRSGDECVVALTDQWYITYGESEWKQLTDECLSNMSLYHDETRHGFEHTLGWLNQWACS 60
Query: 580 RSFGLGTRIPWDDQFLVESLSDSTIYMAYYTVVHYLQNGDMYGSSESVIKPQQLTDDVWD 639
RSFGLGTRIPWD+QFLVESLSDSTIYMAYYT+ HYLQN DMYG+SES IKPQQLTDDVWD
Sbjct: 61 RSFGLGTRIPWDEQFLVESLSDSTIYMAYYTIAHYLQNNDMYGTSESSIKPQQLTDDVWD 120
Query: 640 YIFCDGPFPKSTDISSSLLGRMKKEFEYWYPLDLRVSGKDLIQNHLTFCIYNHTAIMSKH 699
YIFC GPFPKSTDISSS+L +MK EFEYWYP DLRVSGKDLIQNHLTFC+YNHTAI K
Sbjct: 121 YIFCGGPFPKSTDISSSVLEKMKLEFEYWYPFDLRVSGKDLIQNHLTFCLYNHTAIFPKR 180
Query: 700 HWPRGFRCNGHIMLNKAKMSKSSGNFRTIRQAIEEFSADATRFSLAYAGDGVDDANFDFM 759
HWPRG+RCNGH+MLN KMSKS+GNFRTIRQAIEEFSADATRFSLA AGDGVDDANF F
Sbjct: 181 HWPRGYRCNGHLMLNSEKMSKSTGNFRTIRQAIEEFSADATRFSLADAGDGVDDANFVFE 240
Query: 760 TVDTAIKRLTKEIAWYEEILAAESSMRTGPPSTFADCVFANEINIAVKTTEQNYSNYMFR 819
T + AI RLTKE+ W+EE L AESSMRTGPPS +AD VFANEINIAVKTTEQNYSNYMFR
Sbjct: 241 TANAAILRLTKELTWFEETLDAESSMRTGPPSIYADRVFANEINIAVKTTEQNYSNYMFR 300
Query: 820 EALISGFFNLQTARDEYRLSCGVGGYNRELLWRFMDVQTRLLAPICPHYAEFIWRELLKK 879
EAL +GF++LQ ARDEYRLSCG G+NR+L+ RFMDVQTRLLAPICPHYAEFIWRE+LKK
Sbjct: 301 EALKTGFYDLQAARDEYRLSCGASGFNRDLVRRFMDVQTRLLAPICPHYAEFIWREILKK 360
Query: 880 DGFVVKAGWPTAEAPDLTLKSANTYLQGSIVLMRXXXXXXXXXXXXTNKKGAPVASLTEN 939
DGFVVKAGWPTA+APDLTLKSAN YLQ SIVL+R NKKGAPV TE
Sbjct: 361 DGFVVKAGWPTADAPDLTLKSANKYLQDSIVLIRKLLQKQLSGSKKGNKKGAPVVVPTEI 420
Query: 940 KVTGLVYVKEQFDGWKAECLNILQNKFNRDTRTFAPESEILEALQHSSVGQSSNSEQIQK 999
K T LVYV EQFDGWKAECL ILQN FN D+RTFAP+SEI+ ALQ SSVGQSS+ ++ QK
Sbjct: 421 KFTCLVYVNEQFDGWKAECLKILQNSFNEDSRTFAPDSEIMAALQQSSVGQSSDFKRTQK 480
Query: 1000 QCRPFLKFMKDEAIKLGAQALDLRLPFGEMEVLRENLDLIKRQIALEH---VEILSVADA 1056
C PFL+F KDEAI LGAQAL+LRLPFGE+EVLRENLD IKRQI + VEILS ADA
Sbjct: 481 LCMPFLRFKKDEAIALGAQALNLRLPFGEIEVLRENLDSIKRQIGSKEVVDVEILSAADA 540
Query: 1057 GSVAKAGSLASLLNQNPPSPGNPTAIFL 1084
S+AKAGS ASLL NPPSPG+PTA+FL
Sbjct: 541 DSLAKAGSHASLLRDNPPSPGSPTAVFL 568
>Medtr3g058540.1 | leucyl-tRNA synthetase | HC |
chr3:23262925-23261384 | 20130731
Length = 513
Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/507 (77%), Positives = 421/507 (83%), Gaps = 8/507 (1%)
Query: 9 KSTARRDHLREIEVKVQKWWEDSNVFAAEPGDAPPKPGEKFFGTFPFPYMNGYLHLGHAF 68
+S RRD LREIE KVQKWWE+ VF +EPG+ PP+ GEKFFG FPFPYMNGYLHLGHAF
Sbjct: 7 RSFVRRDRLREIESKVQKWWEEKQVFKSEPGNKPPQEGEKFFGNFPFPYMNGYLHLGHAF 66
Query: 69 SLSKLEFAAAFHRLKGANVLLPFAFHCTGMPIKASADKLAREIQRFGXXXXXXXXXXXXX 128
SLSKLEFAAAFHRL+GANVLLPFAFHCTGMPIKASADKLAREIQ+FG
Sbjct: 67 SLSKLEFAAAFHRLRGANVLLPFAFHCTGMPIKASADKLAREIQQFGNPPVFPEEIDELE 126
Query: 129 XXXXXXXXANX--------XXXXXXXXXXXXXXXXXXXQVYQWEIMRSVGISDDEISKFQ 180
N QVYQWEIMRSVGISD EIS+FQ
Sbjct: 127 NLTVVDKDKNAGGNDENENAVAGKFKGKKSKVAAKSGGQVYQWEIMRSVGISDAEISEFQ 186
Query: 181 DPYKWLSYFPPLAVEDLKAFGLGCDWRRSFITTDMNPYFDSFVRWQVRKLKSMGKIVKDV 240
DPYKWLSYFPPLAV+DLKAFG GCDWRRSFITTDMNPYFD+FVRW +RKLK+ GK+VKDV
Sbjct: 187 DPYKWLSYFPPLAVDDLKAFGFGCDWRRSFITTDMNPYFDAFVRWHMRKLKASGKVVKDV 246
Query: 241 RYTIFSPLDGQPCADHDRASGEGVQPQEYTIIKMXXXXXXXXXXXXLEGKKVFLAAATLR 300
RYT+FSPLDGQPCADHDRASGEGVQPQEYTIIKM LEGKKVFLAAATLR
Sbjct: 247 RYTVFSPLDGQPCADHDRASGEGVQPQEYTIIKMEVVSPFPEKFKVLEGKKVFLAAATLR 306
Query: 301 PETMYGQTNAWVLPDGKYGAFEINETEVFVMSHRAALNLAYQNHSRVPEKPTCLLELTGY 360
PETMYGQTNAWVLPDGKYGAFEINETEVFV++HRAALNLAYQNHSRVP+KPTCLLELTG
Sbjct: 307 PETMYGQTNAWVLPDGKYGAFEINETEVFVVAHRAALNLAYQNHSRVPQKPTCLLELTGQ 366
Query: 361 DLIGLPLKSPLSVNDTIYALPMLSILMDKGTGAVTSVPSDAPDDYMALLDLKSKPAFRAK 420
DLIGLP+KSPLS+N+ IY LPMLSILMDKGTG VTSVPSD+PDDYMAL DLKSK AFRAK
Sbjct: 367 DLIGLPVKSPLSLNEIIYVLPMLSILMDKGTGVVTSVPSDSPDDYMALQDLKSKAAFRAK 426
Query: 421 YGVKDEWVMPFEIVPIIEVPEFGNKCAETVCLQMKIKSQNEKEKLAEAKKQTYLKGFTEG 480
+GVKDEWV+PFE++PIIEVP FGNKCAETVCLQMKIKSQNEK+KLAEAKKQTYLKGFT+G
Sbjct: 427 FGVKDEWVLPFEVLPIIEVPPFGNKCAETVCLQMKIKSQNEKDKLAEAKKQTYLKGFTDG 486
Query: 481 TMIVGEFTGRKVQEAKPLIRSMLLDSG 507
TMIVGEF +KVQEAKPLIRS LL++G
Sbjct: 487 TMIVGEFKDKKVQEAKPLIRSKLLETG 513
>Medtr6g027620.1 | valyl-tRNA synthetase/valine-tRNA ligase | HC |
chr6:9605327-9589286 | 20130731
Length = 980
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 199/475 (41%), Gaps = 88/475 (18%)
Query: 479 EGTM--IVGEFTGRKVQEAKPLIRSMLLDSGHAIVYSEPEKRVISRS--GDECVVAL-TD 533
+GT+ + G ++G E + + + L ++G V EP + RS G E + L +
Sbjct: 370 DGTLNEVAGLYSGLDRFEVRKKMWAELEETGLG-VKKEPHTLRVPRSQRGGEVIEPLVSK 428
Query: 534 QWYITYGESEWKKLAEECLSS-----MSLFSDETRHGFEHTLSWLNQWACSRSFGLGTRI 588
QW+++ + LAE+ L + +++ + + H LS + W SR G RI
Sbjct: 429 QWFVSM-----EPLAEKALQAVEKGELTIIPERFEKIYNHWLSNIKDWCISRQLWWGHRI 483
Query: 589 P-W-------DDQFLVESLSDSTIYMAYYTVVHYLQNGDMYGSSESVIKPQQLTDDVWDY 640
P W ++ ++V +D + A+ YG + + DV D
Sbjct: 484 PVWYIEGKDKEEDYIVARNTDEALEKAH----------KKYGKDVEIYQ----DPDVLDT 529
Query: 641 IFCDGPFPKST----DISSSLLGRMKKEFEYWYPLDLRVSGKDLIQNHLTFCIYNHTAIM 696
F +P ST D+S+ ++F+ +YP + +G D++ + +
Sbjct: 530 WFSSALWPFSTLGWPDLSA-------EDFKTFYPTTMLETGHDILFFWVARMVMMGIEFT 582
Query: 697 SKHHWPRGFRCNGHIMLNKA-KMSKSSGNFRTIRQAIEEFSADATRFSLAYAGDGVD-DA 754
K + + +G I ++ KMSK+ GN I++F DA RF++A G D +
Sbjct: 583 GKVPFSYIY-LHGLIRDSQGRKMSKTLGNVIDPLDTIKDFGTDALRFTVALGTAGQDLNL 641
Query: 755 NFDFMTVDTA------------IKRLTKE--IAWYEEILA----AESSMRTGPPSTFADC 796
+ + +T + A ++ L KE ++ +E IL+ E S+ P +C
Sbjct: 642 STERLTSNKAFTNKLWNAGKFVLQNLPKENDVSAWENILSYKFDTEDSVLNLP---LPEC 698
Query: 797 VFANEINIAVKTTEQNYSNYMFREA-------LISGFFNLQTARDEYRL-SCGVGGYNRE 848
+++++ +++ NY + F E + F + + RL + G GG +
Sbjct: 699 WVVSKLHLLIESATANYDKFFFGEVGRETYDFFWADFADWYIEASKGRLYNSGNGGNSAA 758
Query: 849 ------LLWRFMDVQTRLLAPICPHYAEFIWRELLKKDGFVVKAGWPTAEAPDLT 897
LL+ F ++ ++L P P E +W+ L + ++ WP + P T
Sbjct: 759 LMAQAVLLYTFENI-LKVLHPFMPFVTEELWQALPNRKHALIVTPWPETKLPRCT 812
>Medtr4g132500.2 | leucyl-tRNA synthetase | HC |
chr4:55397369-55386514 | 20130731
Length = 970
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 9 KSTARRDHLREIEVKVQKWWEDSNVFAAEPGDA--PPKPGEKFFGTFPFPYMNGYLHLGH 66
K R EIE K Q++W++ F D KP FP+P G LH+GH
Sbjct: 74 KPVNRAYPFHEIEPKWQRFWDEFCTFRTPDDDDIDTSKPKYYILDMFPYPSGAG-LHVGH 132
Query: 67 AFSLSKLEFAAAFHRLKGANVLLPFAFHCTGMPIKASA 104
+ + A F R++G NVL P + G+P + A
Sbjct: 133 PLGYTATDILARFKRMQGYNVLHPMGWDAFGLPAEQYA 170
>Medtr4g132500.1 | leucyl-tRNA synthetase | HC |
chr4:55397313-55386514 | 20130731
Length = 970
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 9 KSTARRDHLREIEVKVQKWWEDSNVFAAEPGDA--PPKPGEKFFGTFPFPYMNGYLHLGH 66
K R EIE K Q++W++ F D KP FP+P G LH+GH
Sbjct: 74 KPVNRAYPFHEIEPKWQRFWDEFCTFRTPDDDDIDTSKPKYYILDMFPYPSGAG-LHVGH 132
Query: 67 AFSLSKLEFAAAFHRLKGANVLLPFAFHCTGMPIKASA 104
+ + A F R++G NVL P + G+P + A
Sbjct: 133 PLGYTATDILARFKRMQGYNVLHPMGWDAFGLPAEQYA 170